Actual source code: pinit.c

  1: #define PETSC_DESIRE_FEATURE_TEST_MACROS
  2: /*
  3:    This file defines the initialization of PETSc, including PetscInitialize()
  4: */
  5: #include <petsc/private/petscimpl.h>
  6: #include <petscviewer.h>
  7: #include <petsc/private/garbagecollector.h>

  9: #if !defined(PETSC_HAVE_WINDOWS_COMPILERS)
 10: #include <petsc/private/valgrind/valgrind.h>
 11: #endif

 13: #if defined(PETSC_HAVE_FORTRAN)
 14: #include <petsc/private/fortranimpl.h>
 15: #endif

 17: #if PetscDefined(USE_COVERAGE)
 18: EXTERN_C_BEGIN
 19:   #if defined(PETSC_HAVE___GCOV_DUMP)
 21:   #endif
 22: void __gcov_flush(void);
 23: EXTERN_C_END
 24: #endif

 26: #if defined(PETSC_SERIALIZE_FUNCTIONS)
 27: PETSC_INTERN PetscFPT PetscFPTData;
 28: PetscFPT              PetscFPTData = 0;
 29: #endif

 31: #if PetscDefined(HAVE_SAWS)
 32: #include <petscviewersaws.h>
 33: #endif

 35: PETSC_INTERN FILE *petsc_history;

 37: PETSC_INTERN PetscErrorCode PetscInitialize_DynamicLibraries(void);
 38: PETSC_INTERN PetscErrorCode PetscFinalize_DynamicLibraries(void);
 39: PETSC_INTERN PetscErrorCode PetscSequentialPhaseBegin_Private(MPI_Comm, int);
 40: PETSC_INTERN PetscErrorCode PetscSequentialPhaseEnd_Private(MPI_Comm, int);
 41: PETSC_INTERN PetscErrorCode PetscCloseHistoryFile(FILE **);

 43: /* user may set these BEFORE calling PetscInitialize() */
 44: MPI_Comm PETSC_COMM_WORLD = MPI_COMM_NULL;
 45: #if PetscDefined(HAVE_MPI_INIT_THREAD)
 46: PetscMPIInt PETSC_MPI_THREAD_REQUIRED = MPI_THREAD_FUNNELED;
 47: #else
 48: PetscMPIInt PETSC_MPI_THREAD_REQUIRED = 0;
 49: #endif

 51: PetscMPIInt Petsc_Counter_keyval      = MPI_KEYVAL_INVALID;
 52: PetscMPIInt Petsc_InnerComm_keyval    = MPI_KEYVAL_INVALID;
 53: PetscMPIInt Petsc_OuterComm_keyval    = MPI_KEYVAL_INVALID;
 54: PetscMPIInt Petsc_ShmComm_keyval      = MPI_KEYVAL_INVALID;
 55: PetscMPIInt Petsc_CreationIdx_keyval  = MPI_KEYVAL_INVALID;
 56: PetscMPIInt Petsc_Garbage_HMap_keyval = MPI_KEYVAL_INVALID;

 58: PetscMPIInt Petsc_SharedWD_keyval  = MPI_KEYVAL_INVALID;
 59: PetscMPIInt Petsc_SharedTmp_keyval = MPI_KEYVAL_INVALID;

 61: /*
 62:      Declare and set all the string names of the PETSc enums
 63: */
 64: const char *const PetscBools[]     = {"FALSE", "TRUE", "PetscBool", "PETSC_", NULL};
 65: const char *const PetscCopyModes[] = {"COPY_VALUES", "OWN_POINTER", "USE_POINTER", "PetscCopyMode", "PETSC_", NULL};

 67: PetscBool PetscPreLoadingUsed = PETSC_FALSE;
 68: PetscBool PetscPreLoadingOn   = PETSC_FALSE;

 70: PetscInt PetscHotRegionDepth;

 72: PetscBool PETSC_RUNNING_ON_VALGRIND = PETSC_FALSE;

 74: #if defined(PETSC_HAVE_THREADSAFETY)
 75: PetscSpinlock PetscViewerASCIISpinLockOpen;
 76: PetscSpinlock PetscViewerASCIISpinLockStdout;
 77: PetscSpinlock PetscViewerASCIISpinLockStderr;
 78: PetscSpinlock PetscCommSpinLock;
 79: #endif

 81: /*
 82:       PetscInitializeNoPointers - Calls PetscInitialize() from C/C++ without the pointers to argc and args

 84:    Collective

 86:    Level: advanced

 88:     Notes:
 89:     this is called only by the PETSc Julia interface. Even though it might start MPI it sets the flag to
 90:      indicate that it did NOT start MPI so that the PetscFinalize() does not end MPI, thus allowing PetscInitialize() to
 91:      be called multiple times from Julia without the problem of trying to initialize MPI more than once.

 93:      Developer Note: Turns off PETSc signal handling to allow Julia to manage signals

 95: .seealso: `PetscInitialize()`, `PetscInitializeFortran()`, `PetscInitializeNoArguments()`
 96: */
 97: PetscErrorCode PetscInitializeNoPointers(int argc, char **args, const char *filename, const char *help)
 98: {
 99:   int    myargc = argc;
100:   char **myargs = args;

102:   PetscFunctionBegin;
103:   PetscCall(PetscInitialize(&myargc, &myargs, filename, help));
104:   PetscCall(PetscPopSignalHandler());
105:   PetscBeganMPI = PETSC_FALSE;
106:   PetscFunctionReturn(PETSC_SUCCESS);
107: }

109: /*
110:       Used by Julia interface to get communicator
111: */
112: PetscErrorCode PetscGetPETSC_COMM_SELF(MPI_Comm *comm)
113: {
114:   PetscFunctionBegin;
116:   *comm = PETSC_COMM_SELF;
117:   PetscFunctionReturn(PETSC_SUCCESS);
118: }

120: /*@C
121:       PetscInitializeNoArguments - Calls `PetscInitialize()` from C/C++ without
122:         the command line arguments.

124:    Collective

126:    Level: advanced

128: .seealso: `PetscInitialize()`, `PetscInitializeFortran()`
129: @*/
130: PetscErrorCode PetscInitializeNoArguments(void)
131: {
132:   int    argc = 0;
133:   char **args = NULL;

135:   PetscFunctionBegin;
136:   PetscCall(PetscInitialize(&argc, &args, NULL, NULL));
137:   PetscFunctionReturn(PETSC_SUCCESS);
138: }

140: /*@
141:       PetscInitialized - Determine whether PETSc is initialized.

143:    Level: beginner

145: .seealso: `PetscInitialize()`, `PetscInitializeNoArguments()`, `PetscInitializeFortran()`
146: @*/
147: PetscErrorCode PetscInitialized(PetscBool *isInitialized)
148: {
149:   PetscFunctionBegin;
151:   *isInitialized = PetscInitializeCalled;
152:   PetscFunctionReturn(PETSC_SUCCESS);
153: }

155: /*@
156:       PetscFinalized - Determine whether `PetscFinalize()` has been called yet

158:    Level: developer

160: .seealso: `PetscInitialize()`, `PetscInitializeNoArguments()`, `PetscInitializeFortran()`
161: @*/
162: PetscErrorCode PetscFinalized(PetscBool *isFinalized)
163: {
164:   PetscFunctionBegin;
166:   *isFinalized = PetscFinalizeCalled;
167:   PetscFunctionReturn(PETSC_SUCCESS);
168: }

170: PETSC_INTERN PetscErrorCode PetscOptionsCheckInitial_Private(const char[]);

172: /*
173:        This function is the MPI reduction operation used to compute the sum of the
174:    first half of the datatype and the max of the second half.
175: */
176: MPI_Op MPIU_MAXSUM_OP               = 0;
177: MPI_Op Petsc_Garbage_SetIntersectOp = 0;

179: PETSC_INTERN void MPIAPI MPIU_MaxSum_Local(void *in, void *out, int *cnt, MPI_Datatype *datatype)
180: {
181:   PetscInt *xin = (PetscInt *)in, *xout = (PetscInt *)out, i, count = *cnt;

183:   PetscFunctionBegin;
184:   if (*datatype != MPIU_2INT) {
185:     PetscErrorCode ierr = (*PetscErrorPrintf)("Can only handle MPIU_2INT data types");
186:     (void)ierr;
187:     PETSCABORT(MPI_COMM_SELF, PETSC_ERR_ARG_WRONG);
188:   }

190:   for (i = 0; i < count; i++) {
191:     xout[2 * i] = PetscMax(xout[2 * i], xin[2 * i]);
192:     xout[2 * i + 1] += xin[2 * i + 1];
193:   }
194:   PetscFunctionReturnVoid();
195: }

197: /*
198:     Returns the max of the first entry owned by this processor and the
199: sum of the second entry.

201:     The reason sizes[2*i] contains lengths sizes[2*i+1] contains flag of 1 if length is nonzero
202: is so that the MPIU_MAXSUM_OP() can set TWO values, if we passed in only sizes[i] with lengths
203: there would be no place to store the both needed results.
204: */
205: PetscErrorCode PetscMaxSum(MPI_Comm comm, const PetscInt sizes[], PetscInt *max, PetscInt *sum)
206: {
207:   PetscFunctionBegin;
208: #if defined(PETSC_HAVE_MPI_REDUCE_SCATTER_BLOCK)
209:   {
210:     struct {
211:       PetscInt max, sum;
212:     } work;
213:     PetscCallMPI(MPI_Reduce_scatter_block((void *)sizes, &work, 1, MPIU_2INT, MPIU_MAXSUM_OP, comm));
214:     *max = work.max;
215:     *sum = work.sum;
216:   }
217: #else
218:   {
219:     PetscMPIInt size, rank;
220:     struct {
221:       PetscInt max, sum;
222:     } *work;
223:     PetscCallMPI(MPI_Comm_size(comm, &size));
224:     PetscCallMPI(MPI_Comm_rank(comm, &rank));
225:     PetscCall(PetscMalloc1(size, &work));
226:     PetscCall(MPIU_Allreduce((void *)sizes, work, size, MPIU_2INT, MPIU_MAXSUM_OP, comm));
227:     *max = work[rank].max;
228:     *sum = work[rank].sum;
229:     PetscCall(PetscFree(work));
230:   }
231: #endif
232:   PetscFunctionReturn(PETSC_SUCCESS);
233: }

235: #if defined(PETSC_HAVE_REAL___FLOAT128) || defined(PETSC_HAVE_REAL___FP16)
236:   #if defined(PETSC_HAVE_REAL___FLOAT128)
237:     #include <quadmath.h>
238:   #endif
239: MPI_Op MPIU_SUM___FP16___FLOAT128 = 0;
240:   #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16)
241: MPI_Op MPIU_SUM = 0;
242:   #endif

244: PETSC_EXTERN void MPIAPI PetscSum_Local(void *in, void *out, PetscMPIInt *cnt, MPI_Datatype *datatype)
245: {
246:   PetscInt i, count = *cnt;

248:   PetscFunctionBegin;
249:   if (*datatype == MPIU_REAL) {
250:     PetscReal *xin = (PetscReal *)in, *xout = (PetscReal *)out;
251:     for (i = 0; i < count; i++) xout[i] += xin[i];
252:   }
253:   #if defined(PETSC_HAVE_COMPLEX)
254:   else if (*datatype == MPIU_COMPLEX) {
255:     PetscComplex *xin = (PetscComplex *)in, *xout = (PetscComplex *)out;
256:     for (i = 0; i < count; i++) xout[i] += xin[i];
257:   }
258:   #endif
259:   #if defined(PETSC_HAVE_REAL___FLOAT128)
260:   else if (*datatype == MPIU___FLOAT128) {
261:     __float128 *xin = (__float128 *)in, *xout = (__float128 *)out;
262:     for (i = 0; i < count; i++) xout[i] += xin[i];
263:     #if defined(PETSC_HAVE_COMPLEX)
264:   } else if (*datatype == MPIU___COMPLEX128) {
265:     __complex128 *xin = (__complex128 *)in, *xout = (__complex128 *)out;
266:     for (i = 0; i < count; i++) xout[i] += xin[i];
267:     #endif
268:   }
269:   #endif
270:   #if defined(PETSC_HAVE_REAL___FP16)
271:   else if (*datatype == MPIU___FP16) {
272:     __fp16 *xin = (__fp16 *)in, *xout = (__fp16 *)out;
273:     for (i = 0; i < count; i++) xout[i] += xin[i];
274:   }
275:   #endif
276:   else {
277:   #if !defined(PETSC_HAVE_REAL___FLOAT128) && !defined(PETSC_HAVE_REAL___FP16)
278:     PetscCallAbort(MPI_COMM_SElF, (*PetscErrorPrintf)("Can only handle MPIU_REAL or MPIU_COMPLEX data types"));
279:   #elif !defined(PETSC_HAVE_REAL___FP16)
280:     PetscCallAbort(MPI_COMM_SELF, (*PetscErrorPrintf)("Can only handle MPIU_REAL, MPIU_COMPLEX, MPIU___FLOAT128, or MPIU___COMPLEX128 data types"));
281:   #elif !defined(PETSC_HAVE_REAL___FLOAT128)
282:     PetscCallAbort(MPI_COMM_SELF, (*PetscErrorPrintf)("Can only handle MPIU_REAL, MPIU_COMPLEX, or MPIU___FP16 data types"));
283:   #else
284:     PetscCallAbort(MPI_COMM_SELF, (*PetscErrorPrintf)("Can only handle MPIU_REAL, MPIU_COMPLEX, MPIU___FLOAT128, MPIU___COMPLEX128, or MPIU___FP16 data types"));
285:   #endif
286:     PETSCABORT(MPI_COMM_SELF, PETSC_ERR_ARG_WRONG);
287:   }
288:   PetscFunctionReturnVoid();
289: }
290: #endif

292: #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16)
293: MPI_Op MPIU_MAX = 0;
294: MPI_Op MPIU_MIN = 0;

296: PETSC_EXTERN void MPIAPI PetscMax_Local(void *in, void *out, PetscMPIInt *cnt, MPI_Datatype *datatype)
297: {
298:   PetscInt i, count = *cnt;

300:   PetscFunctionBegin;
301:   if (*datatype == MPIU_REAL) {
302:     PetscReal *xin = (PetscReal *)in, *xout = (PetscReal *)out;
303:     for (i = 0; i < count; i++) xout[i] = PetscMax(xout[i], xin[i]);
304:   }
305:   #if defined(PETSC_HAVE_COMPLEX)
306:   else if (*datatype == MPIU_COMPLEX) {
307:     PetscComplex *xin = (PetscComplex *)in, *xout = (PetscComplex *)out;
308:     for (i = 0; i < count; i++) xout[i] = PetscRealPartComplex(xout[i]) < PetscRealPartComplex(xin[i]) ? xin[i] : xout[i];
309:   }
310:   #endif
311:   else {
312:     PetscCallAbort(MPI_COMM_SELF, (*PetscErrorPrintf)("Can only handle MPIU_REAL or MPIU_COMPLEX data types"));
313:     PETSCABORT(MPI_COMM_SELF, PETSC_ERR_ARG_WRONG);
314:   }
315:   PetscFunctionReturnVoid();
316: }

318: PETSC_EXTERN void MPIAPI PetscMin_Local(void *in, void *out, PetscMPIInt *cnt, MPI_Datatype *datatype)
319: {
320:   PetscInt i, count = *cnt;

322:   PetscFunctionBegin;
323:   if (*datatype == MPIU_REAL) {
324:     PetscReal *xin = (PetscReal *)in, *xout = (PetscReal *)out;
325:     for (i = 0; i < count; i++) xout[i] = PetscMin(xout[i], xin[i]);
326:   }
327:   #if defined(PETSC_HAVE_COMPLEX)
328:   else if (*datatype == MPIU_COMPLEX) {
329:     PetscComplex *xin = (PetscComplex *)in, *xout = (PetscComplex *)out;
330:     for (i = 0; i < count; i++) xout[i] = PetscRealPartComplex(xout[i]) > PetscRealPartComplex(xin[i]) ? xin[i] : xout[i];
331:   }
332:   #endif
333:   else {
334:     PetscCallAbort(MPI_COMM_SELF, (*PetscErrorPrintf)("Can only handle MPIU_REAL or MPIU_SCALAR data (i.e. double or complex) types"));
335:     PETSCABORT(MPI_COMM_SELF, PETSC_ERR_ARG_WRONG);
336:   }
337:   PetscFunctionReturnVoid();
338: }
339: #endif

341: /*
342:    Private routine to delete internal tag/name counter storage when a communicator is freed.

344:    This is called by MPI, not by users. This is called by MPI_Comm_free() when the communicator that has this  data as an attribute is freed.

346:    Note: this is declared extern "C" because it is passed to MPI_Comm_create_keyval()

348: */
349: PETSC_EXTERN PetscMPIInt MPIAPI Petsc_Counter_Attr_Delete_Fn(MPI_Comm comm, PetscMPIInt keyval, void *count_val, void *extra_state)
350: {
351:   PetscCommCounter      *counter = (PetscCommCounter *)count_val;
352:   struct PetscCommStash *comms   = counter->comms, *pcomm;

354:   PetscFunctionBegin;
355:   PetscCallMPI(PetscInfo(NULL, "Deleting counter data in an MPI_Comm %ld\n", (long)comm));
356:   PetscCallMPI(PetscFree(counter->iflags));
357:   while (comms) {
358:     PetscCallMPI(MPI_Comm_free(&comms->comm));
359:     pcomm = comms;
360:     comms = comms->next;
361:     PetscCall(PetscFree(pcomm));
362:   }
363:   PetscCallMPI(PetscFree(counter));
364:   PetscFunctionReturn(MPI_SUCCESS);
365: }

367: /*
368:   This is invoked on the outer comm as a result of either PetscCommDestroy() (via MPI_Comm_delete_attr) or when the user
369:   calls MPI_Comm_free().

371:   This is the only entry point for breaking the links between inner and outer comms.

373:   This is called by MPI, not by users. This is called when MPI_Comm_free() is called on the communicator.

375:   Note: this is declared extern "C" because it is passed to MPI_Comm_create_keyval()

377: */
378: PETSC_EXTERN PetscMPIInt MPIAPI Petsc_InnerComm_Attr_Delete_Fn(MPI_Comm comm, PetscMPIInt keyval, void *attr_val, void *extra_state)
379: {
380:   union
381:   {
382:     MPI_Comm comm;
383:     void    *ptr;
384:   } icomm;

386:   PetscFunctionBegin;
387:   if (keyval != Petsc_InnerComm_keyval) SETERRMPI(PETSC_COMM_SELF, PETSC_ERR_ARG_CORRUPT, "Unexpected keyval");
388:   icomm.ptr = attr_val;
389:   if (PetscDefined(USE_DEBUG)) {
390:     /* Error out if the inner/outer comms are not correctly linked through their Outer/InnterComm attributes */
391:     PetscMPIInt flg;
392:     union
393:     {
394:       MPI_Comm comm;
395:       void    *ptr;
396:     } ocomm;
397:     PetscCallMPI(MPI_Comm_get_attr(icomm.comm, Petsc_OuterComm_keyval, &ocomm, &flg));
398:     if (!flg) SETERRMPI(PETSC_COMM_SELF, PETSC_ERR_ARG_CORRUPT, "Inner comm does not have OuterComm attribute");
399:     if (ocomm.comm != comm) SETERRMPI(PETSC_COMM_SELF, PETSC_ERR_ARG_CORRUPT, "Inner comm's OuterComm attribute does not point to outer PETSc comm");
400:   }
401:   PetscCallMPI(MPI_Comm_delete_attr(icomm.comm, Petsc_OuterComm_keyval));
402:   PetscCallMPI(PetscInfo(NULL, "User MPI_Comm %ld is being unlinked from inner PETSc comm %ld\n", (long)comm, (long)icomm.comm));
403:   PetscFunctionReturn(MPI_SUCCESS);
404: }

406: /*
407:  * This is invoked on the inner comm when Petsc_InnerComm_Attr_Delete_Fn calls MPI_Comm_delete_attr().  It should not be reached any other way.
408:  */
409: PETSC_EXTERN PetscMPIInt MPIAPI Petsc_OuterComm_Attr_Delete_Fn(MPI_Comm comm, PetscMPIInt keyval, void *attr_val, void *extra_state)
410: {
411:   PetscFunctionBegin;
412:   PetscCallMPI(PetscInfo(NULL, "Removing reference to PETSc communicator embedded in a user MPI_Comm %ld\n", (long)comm));
413:   PetscFunctionReturn(MPI_SUCCESS);
414: }

416: PETSC_EXTERN PetscMPIInt MPIAPI Petsc_ShmComm_Attr_Delete_Fn(MPI_Comm, PetscMPIInt, void *, void *);

418: #if defined(PETSC_USE_PETSC_MPI_EXTERNAL32)
419: PETSC_EXTERN PetscMPIInt PetscDataRep_extent_fn(MPI_Datatype, MPI_Aint *, void *);
420: PETSC_EXTERN PetscMPIInt PetscDataRep_read_conv_fn(void *, MPI_Datatype, PetscMPIInt, void *, MPI_Offset, void *);
421: PETSC_EXTERN PetscMPIInt PetscDataRep_write_conv_fn(void *, MPI_Datatype, PetscMPIInt, void *, MPI_Offset, void *);
422: #endif

424: PetscMPIInt PETSC_MPI_ERROR_CLASS = MPI_ERR_LASTCODE, PETSC_MPI_ERROR_CODE;

426: PETSC_INTERN int    PetscGlobalArgc;
427: PETSC_INTERN char **PetscGlobalArgs;
428: int                 PetscGlobalArgc = 0;
429: char              **PetscGlobalArgs = NULL;
430: PetscSegBuffer      PetscCitationsList;

432: PetscErrorCode PetscCitationsInitialize(void)
433: {
434:   PetscFunctionBegin;
435:   PetscCall(PetscSegBufferCreate(1, 10000, &PetscCitationsList));

437:   PetscCall(PetscCitationsRegister("@TechReport{petsc-user-ref,\n\
438:   Author = {Satish Balay and Shrirang Abhyankar and Mark~F. Adams and Steven Benson and Jed Brown\n\
439:     and Peter Brune and Kris Buschelman and Emil Constantinescu and Lisandro Dalcin and Alp Dener\n\
440:     and Victor Eijkhout and Jacob Faibussowitsch and William~D. Gropp and V\'{a}clav Hapla and Tobin Isaac and Pierre Jolivet\n\
441:     and Dmitry Karpeev and Dinesh Kaushik and Matthew~G. Knepley and Fande Kong and Scott Kruger\n\
442:     and Dave~A. May and Lois Curfman McInnes and Richard Tran Mills and Lawrence Mitchell and Todd Munson\n\
443:     and Jose~E. Roman and Karl Rupp and Patrick Sanan and Jason Sarich and Barry~F. Smith\n\
444:     and Stefano Zampini and Hong Zhang and Hong Zhang and Junchao Zhang},\n\
445:   Title = {{PETSc/TAO} Users Manual},\n\
446:   Number = {ANL-21/39 - Revision 3.19},\n\
447:   Institution = {Argonne National Laboratory},\n\
448:   Year = {2023}\n}\n",
449:                                    NULL));

451:   PetscCall(PetscCitationsRegister("@InProceedings{petsc-efficient,\n\
452:   Author = {Satish Balay and William D. Gropp and Lois Curfman McInnes and Barry F. Smith},\n\
453:   Title = {Efficient Management of Parallelism in Object Oriented Numerical Software Libraries},\n\
454:   Booktitle = {Modern Software Tools in Scientific Computing},\n\
455:   Editor = {E. Arge and A. M. Bruaset and H. P. Langtangen},\n\
456:   Pages = {163--202},\n\
457:   Publisher = {Birkh{\\\"{a}}user Press},\n\
458:   Year = {1997}\n}\n",
459:                                    NULL));

461:   PetscFunctionReturn(PETSC_SUCCESS);
462: }

464: static char programname[PETSC_MAX_PATH_LEN] = ""; /* HP includes entire path in name */

466: PetscErrorCode PetscSetProgramName(const char name[])
467: {
468:   PetscFunctionBegin;
469:   PetscCall(PetscStrncpy(programname, name, sizeof(programname)));
470:   PetscFunctionReturn(PETSC_SUCCESS);
471: }

473: /*@C
474:     PetscGetProgramName - Gets the name of the running program.

476:     Not Collective

478:     Input Parameter:
479: .   len - length of the string name

481:     Output Parameter:
482: .   name - the name of the running program, provide a string of length `PETSC_MAX_PATH_LEN`

484:    Level: advanced

486: .seealso: `PetscFinalize()`, `PetscInitializeFortran()`, `PetscGetArguments()`, `PetscInitialize()`
487: @*/
488: PetscErrorCode PetscGetProgramName(char name[], size_t len)
489: {
490:   PetscFunctionBegin;
491:   PetscCall(PetscStrncpy(name, programname, len));
492:   PetscFunctionReturn(PETSC_SUCCESS);
493: }

495: /*@C
496:    PetscGetArgs - Allows you to access the raw command line arguments anywhere
497:      after PetscInitialize() is called but before `PetscFinalize()`.

499:    Not Collective

501:    Output Parameters:
502: +  argc - count of number of command line arguments
503: -  args - the command line arguments

505:    Level: intermediate

507:    Notes:
508:       This is usually used to pass the command line arguments into other libraries
509:    that are called internally deep in PETSc or the application.

511:       The first argument contains the program name as is normal for C arguments.

513: .seealso: `PetscFinalize()`, `PetscInitializeFortran()`, `PetscGetArguments()`, `PetscInitialize()`
514: @*/
515: PetscErrorCode PetscGetArgs(int *argc, char ***args)
516: {
517:   PetscFunctionBegin;
518:   PetscCheck(PetscInitializeCalled || !PetscFinalizeCalled, PETSC_COMM_SELF, PETSC_ERR_ORDER, "You must call after PetscInitialize() but before PetscFinalize()");
519:   *argc = PetscGlobalArgc;
520:   *args = PetscGlobalArgs;
521:   PetscFunctionReturn(PETSC_SUCCESS);
522: }

524: /*@C
525:    PetscGetArguments - Allows you to access the  command line arguments anywhere
526:      after `PetscInitialize()` is called but before `PetscFinalize()`.

528:    Not Collective

530:    Output Parameter:
531: .  args - the command line arguments

533:    Level: intermediate

535:    Note:
536:       This does NOT start with the program name and IS `NULL` terminated (final arg is void)

538: .seealso: `PetscFinalize()`, `PetscInitializeFortran()`, `PetscGetArgs()`, `PetscFreeArguments()`, `PetscInitialize()`
539: @*/
540: PetscErrorCode PetscGetArguments(char ***args)
541: {
542:   PetscInt i, argc = PetscGlobalArgc;

544:   PetscFunctionBegin;
545:   PetscCheck(PetscInitializeCalled || !PetscFinalizeCalled, PETSC_COMM_SELF, PETSC_ERR_ORDER, "You must call after PetscInitialize() but before PetscFinalize()");
546:   if (!argc) {
547:     *args = NULL;
548:     PetscFunctionReturn(PETSC_SUCCESS);
549:   }
550:   PetscCall(PetscMalloc1(argc, args));
551:   for (i = 0; i < argc - 1; i++) PetscCall(PetscStrallocpy(PetscGlobalArgs[i + 1], &(*args)[i]));
552:   (*args)[argc - 1] = NULL;
553:   PetscFunctionReturn(PETSC_SUCCESS);
554: }

556: /*@C
557:    PetscFreeArguments - Frees the memory obtained with `PetscGetArguments()`

559:    Not Collective

561:    Output Parameter:
562: .  args - the command line arguments

564:    Level: intermediate

566: .seealso: `PetscFinalize()`, `PetscInitializeFortran()`, `PetscGetArgs()`, `PetscGetArguments()`
567: @*/
568: PetscErrorCode PetscFreeArguments(char **args)
569: {
570:   PetscFunctionBegin;
571:   if (args) {
572:     PetscInt i = 0;

574:     while (args[i]) PetscCall(PetscFree(args[i++]));
575:     PetscCall(PetscFree(args));
576:   }
577:   PetscFunctionReturn(PETSC_SUCCESS);
578: }

580: #if PetscDefined(HAVE_SAWS)
581:   #include <petscconfiginfo.h>

583: PETSC_INTERN PetscErrorCode PetscInitializeSAWs(const char help[])
584: {
585:   PetscFunctionBegin;
586:   if (!PetscGlobalRank) {
587:     char      cert[PETSC_MAX_PATH_LEN], root[PETSC_MAX_PATH_LEN], *intro, programname[64], *appline, *options, version[64];
588:     int       port;
589:     PetscBool flg, rootlocal = PETSC_FALSE, flg2, selectport = PETSC_FALSE;
590:     size_t    applinelen, introlen;
591:     char      sawsurl[256];

593:     PetscCall(PetscOptionsHasName(NULL, NULL, "-saws_log", &flg));
594:     if (flg) {
595:       char sawslog[PETSC_MAX_PATH_LEN];

597:       PetscCall(PetscOptionsGetString(NULL, NULL, "-saws_log", sawslog, sizeof(sawslog), NULL));
598:       if (sawslog[0]) {
599:         PetscCallSAWs(SAWs_Set_Use_Logfile, (sawslog));
600:       } else {
601:         PetscCallSAWs(SAWs_Set_Use_Logfile, (NULL));
602:       }
603:     }
604:     PetscCall(PetscOptionsGetString(NULL, NULL, "-saws_https", cert, sizeof(cert), &flg));
605:     if (flg) PetscCallSAWs(SAWs_Set_Use_HTTPS, (cert));
606:     PetscCall(PetscOptionsGetBool(NULL, NULL, "-saws_port_auto_select", &selectport, NULL));
607:     if (selectport) {
608:       PetscCallSAWs(SAWs_Get_Available_Port, (&port));
609:       PetscCallSAWs(SAWs_Set_Port, (port));
610:     } else {
611:       PetscCall(PetscOptionsGetInt(NULL, NULL, "-saws_port", &port, &flg));
612:       if (flg) PetscCallSAWs(SAWs_Set_Port, (port));
613:     }
614:     PetscCall(PetscOptionsGetString(NULL, NULL, "-saws_root", root, sizeof(root), &flg));
615:     if (flg) {
616:       PetscCallSAWs(SAWs_Set_Document_Root, (root));
617:       PetscCall(PetscStrcmp(root, ".", &rootlocal));
618:     } else {
619:       PetscCall(PetscOptionsHasName(NULL, NULL, "-saws_options", &flg));
620:       if (flg) {
621:         PetscCall(PetscStrreplace(PETSC_COMM_WORLD, "${PETSC_DIR}/share/petsc/saws", root, sizeof(root)));
622:         PetscCallSAWs(SAWs_Set_Document_Root, (root));
623:       }
624:     }
625:     PetscCall(PetscOptionsHasName(NULL, NULL, "-saws_local", &flg2));
626:     if (flg2) {
627:       char jsdir[PETSC_MAX_PATH_LEN];
628:       PetscCheck(flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "-saws_local option requires -saws_root option");
629:       PetscCall(PetscSNPrintf(jsdir, sizeof(jsdir), "%s/js", root));
630:       PetscCall(PetscTestDirectory(jsdir, 'r', &flg));
631:       PetscCheck(flg, PETSC_COMM_SELF, PETSC_ERR_FILE_READ, "-saws_local option requires js directory in root directory");
632:       PetscCallSAWs(SAWs_Push_Local_Header, ());
633:     }
634:     PetscCall(PetscGetProgramName(programname, sizeof(programname)));
635:     PetscCall(PetscStrlen(help, &applinelen));
636:     introlen = 4096 + applinelen;
637:     applinelen += 1024;
638:     PetscCall(PetscMalloc(applinelen, &appline));
639:     PetscCall(PetscMalloc(introlen, &intro));

641:     if (rootlocal) {
642:       PetscCall(PetscSNPrintf(appline, applinelen, "%s.c.html", programname));
643:       PetscCall(PetscTestFile(appline, 'r', &rootlocal));
644:     }
645:     PetscCall(PetscOptionsGetAll(NULL, &options));
646:     if (rootlocal && help) {
647:       PetscCall(PetscSNPrintf(appline, applinelen, "<center> Running <a href=\"%s.c.html\">%s</a> %s</center><br><center><pre>%s</pre></center><br>\n", programname, programname, options, help));
648:     } else if (help) {
649:       PetscCall(PetscSNPrintf(appline, applinelen, "<center>Running %s %s</center><br><center><pre>%s</pre></center><br>", programname, options, help));
650:     } else {
651:       PetscCall(PetscSNPrintf(appline, applinelen, "<center> Running %s %s</center><br>\n", programname, options));
652:     }
653:     PetscCall(PetscFree(options));
654:     PetscCall(PetscGetVersion(version, sizeof(version)));
655:     PetscCall(PetscSNPrintf(intro, introlen,
656:                             "<body>\n"
657:                             "<center><h2> <a href=\"https://petsc.org/\">PETSc</a> Application Web server powered by <a href=\"https://bitbucket.org/saws/saws\">SAWs</a> </h2></center>\n"
658:                             "<center>This is the default PETSc application dashboard, from it you can access any published PETSc objects or logging data</center><br><center>%s configured with %s</center><br>\n"
659:                             "%s",
660:                             version, petscconfigureoptions, appline));
661:     PetscCallSAWs(SAWs_Push_Body, ("index.html", 0, intro));
662:     PetscCall(PetscFree(intro));
663:     PetscCall(PetscFree(appline));
664:     if (selectport) {
665:       PetscBool silent;

667:       /* another process may have grabbed the port so keep trying */
668:       while (SAWs_Initialize()) {
669:         PetscCallSAWs(SAWs_Get_Available_Port, (&port));
670:         PetscCallSAWs(SAWs_Set_Port, (port));
671:       }

673:       PetscCall(PetscOptionsGetBool(NULL, NULL, "-saws_port_auto_select_silent", &silent, NULL));
674:       if (!silent) {
675:         PetscCallSAWs(SAWs_Get_FullURL, (sizeof(sawsurl), sawsurl));
676:         PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Point your browser to %s for SAWs\n", sawsurl));
677:       }
678:     } else {
679:       PetscCallSAWs(SAWs_Initialize, ());
680:     }
681:     PetscCall(PetscCitationsRegister("@TechReport{ saws,\n"
682:                                      "  Author = {Matt Otten and Jed Brown and Barry Smith},\n"
683:                                      "  Title  = {Scientific Application Web Server (SAWs) Users Manual},\n"
684:                                      "  Institution = {Argonne National Laboratory},\n"
685:                                      "  Year   = 2013\n}\n",
686:                                      NULL));
687:   }
688:   PetscFunctionReturn(PETSC_SUCCESS);
689: }
690: #endif

692: /* Things must be done before MPI_Init() when MPI is not yet initialized, and can be shared between C init and Fortran init */
693: PETSC_INTERN PetscErrorCode PetscPreMPIInit_Private(void)
694: {
695:   PetscFunctionBegin;
696: #if defined(PETSC_HAVE_HWLOC_SOLARIS_BUG)
697:   /* see MPI.py for details on this bug */
698:   (void)setenv("HWLOC_COMPONENTS", "-x86", 1);
699: #endif
700:   PetscFunctionReturn(PETSC_SUCCESS);
701: }

703: #if PetscDefined(HAVE_ADIOS)
704:   #include <adios.h>
705:   #include <adios_read.h>
706: int64_t Petsc_adios_group;
707: #endif
708: #if PetscDefined(HAVE_OPENMP)
709:   #include <omp.h>
710: PetscInt PetscNumOMPThreads;
711: #endif

713: #include <petsc/private/deviceimpl.h>
714: #if PetscDefined(HAVE_CUDA)
715: #include <petscdevice_cuda.h>
716: // REMOVE ME
717: cudaStream_t PetscDefaultCudaStream = NULL;
718: #endif
719: #if PetscDefined(HAVE_HIP)
720: #include <petscdevice_hip.h>
721: // REMOVE ME
722: hipStream_t PetscDefaultHipStream = NULL;
723: #endif

725: #if PetscDefined(HAVE_DLFCN_H)
726:   #include <dlfcn.h>
727: #endif
728: #if PetscDefined(USE_LOG)
729: PETSC_INTERN PetscErrorCode PetscLogInitialize(void);
730: #endif
731: #if PetscDefined(HAVE_VIENNACL)
732: PETSC_EXTERN PetscErrorCode PetscViennaCLInit(void);
733: PetscBool                   PetscViennaCLSynchronize = PETSC_FALSE;
734: #endif

736: PetscBool PetscCIEnabled = PETSC_FALSE, PetscCIEnabledPortableErrorOutput = PETSC_FALSE;

738: /*
739:   PetscInitialize_Common  - shared code between C and Fortran initialization

741:   prog:     program name
742:   file:     optional PETSc database file name. Might be in Fortran string format when 'ftn' is true
743:   help:     program help message
744:   ftn:      is it called from Fortran initialization (petscinitializef_)?
745:   readarguments,len: used when fortran is true
746: */
747: PETSC_INTERN PetscErrorCode PetscInitialize_Common(const char *prog, const char *file, const char *help, PetscBool ftn, PetscBool readarguments, PetscInt len)
748: {
749:   PetscMPIInt size;
750:   PetscBool   flg = PETSC_TRUE;
751:   char        hostname[256];

753:   PetscFunctionBegin;
754:   if (PetscInitializeCalled) PetscFunctionReturn(PETSC_SUCCESS);
755:   /* these must be initialized in a routine, not as a constant declaration */
756:   PETSC_STDOUT = stdout;
757:   PETSC_STDERR = stderr;

759:   /* PetscCall can be used from now */
760:   PetscErrorHandlingInitialized = PETSC_TRUE;

762:   /*
763:       The checking over compatible runtime libraries is complicated by the MPI ABI initiative
764:       https://wiki.mpich.org/mpich/index.php/ABI_Compatibility_Initiative which started with
765:         MPICH v3.1 (Released February 2014)
766:         IBM MPI v2.1 (December 2014)
767:         Intel MPI Library v5.0 (2014)
768:         Cray MPT v7.0.0 (June 2014)
769:       As of July 31, 2017 the ABI number still appears to be 12, that is all of the versions
770:       listed above and since that time are compatible.

772:       Unfortunately the MPI ABI initiative has not defined a way to determine the ABI number
773:       at compile time or runtime. Thus we will need to systematically track the allowed versions
774:       and how they are represented in the mpi.h and MPI_Get_library_version() output in order
775:       to perform the checking.

777:       Currently we only check for pre MPI ABI versions (and packages that do not follow the MPI ABI).

779:       Questions:

781:         Should the checks for ABI incompatibility be only on the major version number below?
782:         Presumably the output to stderr will be removed before a release.
783:   */

785: #if defined(PETSC_HAVE_MPI_GET_LIBRARY_VERSION)
786:   {
787:     char        mpilibraryversion[MPI_MAX_LIBRARY_VERSION_STRING];
788:     PetscMPIInt mpilibraryversionlength;

790:     PetscCallMPI(MPI_Get_library_version(mpilibraryversion, &mpilibraryversionlength));
791:     /* check for MPICH versions before MPI ABI initiative */
792:   #if defined(MPICH_VERSION)
793:     #if MPICH_NUMVERSION < 30100000
794:     {
795:       char     *ver, *lf;
796:       PetscBool flg = PETSC_FALSE;

798:       PetscCall(PetscStrstr(mpilibraryversion, "MPICH Version:", &ver));
799:       if (ver) {
800:         PetscCall(PetscStrchr(ver, '\n', &lf));
801:         if (lf) {
802:           *lf = 0;
803:           PetscCall(PetscStrendswith(ver, MPICH_VERSION, &flg));
804:         }
805:       }
806:       if (!flg) {
807:         PetscCall(PetscInfo(NULL, "PETSc warning --- MPICH library version \n%s does not match what PETSc was compiled with %s.\n", mpilibraryversion, MPICH_VERSION));
808:         flg = PETSC_TRUE;
809:       }
810:     }
811:     #endif
812:       /* check for OpenMPI version, it is not part of the MPI ABI initiative (is it part of another initiative that needs to be handled?) */
813:   #elif defined(OMPI_MAJOR_VERSION)
814:     {
815:       char     *ver, bs[MPI_MAX_LIBRARY_VERSION_STRING], *bsf;
816:       PetscBool flg                                              = PETSC_FALSE;
817:     #define PSTRSZ 2
818:       char      ompistr1[PSTRSZ][MPI_MAX_LIBRARY_VERSION_STRING] = {"Open MPI", "FUJITSU MPI"};
819:       char      ompistr2[PSTRSZ][MPI_MAX_LIBRARY_VERSION_STRING] = {"v", "Library "};
820:       int       i;
821:       for (i = 0; i < PSTRSZ; i++) {
822:         PetscCall(PetscStrstr(mpilibraryversion, ompistr1[i], &ver));
823:         if (ver) {
824:           PetscCall(PetscSNPrintf(bs, MPI_MAX_LIBRARY_VERSION_STRING, "%s%d.%d", ompistr2[i], OMPI_MAJOR_VERSION, OMPI_MINOR_VERSION));
825:           PetscCall(PetscStrstr(ver, bs, &bsf));
826:           if (bsf) flg = PETSC_TRUE;
827:           break;
828:         }
829:       }
830:       if (!flg) {
831:         PetscCall(PetscInfo(NULL, "PETSc warning --- Open MPI library version \n%s does not match what PETSc was compiled with %d.%d.\n", mpilibraryversion, OMPI_MAJOR_VERSION, OMPI_MINOR_VERSION));
832:         flg = PETSC_TRUE;
833:       }
834:     }
835:   #endif
836:   }
837: #endif

839: #if defined(PETSC_HAVE_DLADDR) && !(defined(__cray__) && defined(__clang__))
840:   /* These symbols are currently in the OpenMPI and MPICH libraries; they may not always be, in that case the test will simply not detect the problem */
841:   PetscCheck(!dlsym(RTLD_DEFAULT, "ompi_mpi_init") || !dlsym(RTLD_DEFAULT, "MPID_Abort"), PETSC_COMM_SELF, PETSC_ERR_MPI_LIB_INCOMP, "Application was linked against both OpenMPI and MPICH based MPI libraries and will not run correctly");
842: #endif

844:   /* on Windows - set printf to default to printing 2 digit exponents */
845: #if defined(PETSC_HAVE__SET_OUTPUT_FORMAT)
846:   _set_output_format(_TWO_DIGIT_EXPONENT);
847: #endif

849:   PetscCall(PetscOptionsCreateDefault());

851:   PetscFinalizeCalled = PETSC_FALSE;

853:   PetscCall(PetscSetProgramName(prog));
854:   PetscCall(PetscSpinlockCreate(&PetscViewerASCIISpinLockOpen));
855:   PetscCall(PetscSpinlockCreate(&PetscViewerASCIISpinLockStdout));
856:   PetscCall(PetscSpinlockCreate(&PetscViewerASCIISpinLockStderr));
857:   PetscCall(PetscSpinlockCreate(&PetscCommSpinLock));

859:   if (PETSC_COMM_WORLD == MPI_COMM_NULL) PETSC_COMM_WORLD = MPI_COMM_WORLD;
860:   PetscCallMPI(MPI_Comm_set_errhandler(PETSC_COMM_WORLD, MPI_ERRORS_RETURN));

862:   if (PETSC_MPI_ERROR_CLASS == MPI_ERR_LASTCODE) {
863:     PetscCallMPI(MPI_Add_error_class(&PETSC_MPI_ERROR_CLASS));
864:     PetscCallMPI(MPI_Add_error_code(PETSC_MPI_ERROR_CLASS, &PETSC_MPI_ERROR_CODE));
865:   }

867:   /* Done after init due to a bug in MPICH-GM? */
868:   PetscCall(PetscErrorPrintfInitialize());

870:   PetscCallMPI(MPI_Comm_rank(MPI_COMM_WORLD, &PetscGlobalRank));
871:   PetscCallMPI(MPI_Comm_size(MPI_COMM_WORLD, &PetscGlobalSize));

873:   MPIU_BOOL        = MPI_INT;
874:   MPIU_ENUM        = MPI_INT;
875:   MPIU_FORTRANADDR = (sizeof(void *) == sizeof(int)) ? MPI_INT : MPIU_INT64;
876:   if (sizeof(size_t) == sizeof(unsigned)) MPIU_SIZE_T = MPI_UNSIGNED;
877:   else if (sizeof(size_t) == sizeof(unsigned long)) MPIU_SIZE_T = MPI_UNSIGNED_LONG;
878: #if defined(PETSC_SIZEOF_LONG_LONG)
879:   else if (sizeof(size_t) == sizeof(unsigned long long)) MPIU_SIZE_T = MPI_UNSIGNED_LONG_LONG;
880: #endif
881:   else SETERRQ(PETSC_COMM_WORLD, PETSC_ERR_SUP_SYS, "Could not find MPI type for size_t");

883:     /*
884:      Initialized the global complex variable; this is because with
885:      shared libraries the constructors for global variables
886:      are not called; at least on IRIX.
887:   */
888: #if defined(PETSC_HAVE_COMPLEX)
889:   {
890:   #if defined(PETSC_CLANGUAGE_CXX) && !defined(PETSC_USE_REAL___FLOAT128)
891:     PetscComplex ic(0.0, 1.0);
892:     PETSC_i = ic;
893:   #else
894:     PETSC_i = _Complex_I;
895:   #endif
896:   }
897: #endif /* PETSC_HAVE_COMPLEX */

899:   /*
900:      Create the PETSc MPI reduction operator that sums of the first
901:      half of the entries and maxes the second half.
902:   */
903:   PetscCallMPI(MPI_Op_create(MPIU_MaxSum_Local, 1, &MPIU_MAXSUM_OP));

905: #if defined(PETSC_HAVE_REAL___FLOAT128)
906:   PetscCallMPI(MPI_Type_contiguous(2, MPI_DOUBLE, &MPIU___FLOAT128));
907:   PetscCallMPI(MPI_Type_commit(&MPIU___FLOAT128));
908:   #if defined(PETSC_HAVE_COMPLEX)
909:   PetscCallMPI(MPI_Type_contiguous(4, MPI_DOUBLE, &MPIU___COMPLEX128));
910:   PetscCallMPI(MPI_Type_commit(&MPIU___COMPLEX128));
911:   #endif
912: #endif
913: #if defined(PETSC_HAVE_REAL___FP16)
914:   PetscCallMPI(MPI_Type_contiguous(2, MPI_CHAR, &MPIU___FP16));
915:   PetscCallMPI(MPI_Type_commit(&MPIU___FP16));
916: #endif

918: #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16)
919:   PetscCallMPI(MPI_Op_create(PetscSum_Local, 1, &MPIU_SUM));
920:   PetscCallMPI(MPI_Op_create(PetscMax_Local, 1, &MPIU_MAX));
921:   PetscCallMPI(MPI_Op_create(PetscMin_Local, 1, &MPIU_MIN));
922: #elif defined(PETSC_HAVE_REAL___FLOAT128) || defined(PETSC_HAVE_REAL___FP16)
923:   PetscCallMPI(MPI_Op_create(PetscSum_Local, 1, &MPIU_SUM___FP16___FLOAT128));
924: #endif

926:   PetscCallMPI(MPI_Type_contiguous(2, MPIU_SCALAR, &MPIU_2SCALAR));
927:   PetscCallMPI(MPI_Op_create(PetscGarbageKeySortedIntersect, 1, &Petsc_Garbage_SetIntersectOp));
928:   PetscCallMPI(MPI_Type_commit(&MPIU_2SCALAR));

930:   /* create datatypes used by MPIU_MAXLOC, MPIU_MINLOC and PetscSplitReduction_Op */
931: #if !defined(PETSC_HAVE_MPIUNI)
932:   {
933:     PetscMPIInt  blockSizes[2]   = {1, 1};
934:     MPI_Aint     blockOffsets[2] = {offsetof(struct petsc_mpiu_real_int, v), offsetof(struct petsc_mpiu_real_int, i)};
935:     MPI_Datatype blockTypes[2]   = {MPIU_REAL, MPIU_INT}, tmpStruct;

937:     PetscCallMPI(MPI_Type_create_struct(2, blockSizes, blockOffsets, blockTypes, &tmpStruct));
938:     PetscCallMPI(MPI_Type_create_resized(tmpStruct, 0, sizeof(struct petsc_mpiu_real_int), &MPIU_REAL_INT));
939:     PetscCallMPI(MPI_Type_free(&tmpStruct));
940:     PetscCallMPI(MPI_Type_commit(&MPIU_REAL_INT));
941:   }
942:   {
943:     PetscMPIInt  blockSizes[2]   = {1, 1};
944:     MPI_Aint     blockOffsets[2] = {offsetof(struct petsc_mpiu_scalar_int, v), offsetof(struct petsc_mpiu_scalar_int, i)};
945:     MPI_Datatype blockTypes[2]   = {MPIU_SCALAR, MPIU_INT}, tmpStruct;

947:     PetscCallMPI(MPI_Type_create_struct(2, blockSizes, blockOffsets, blockTypes, &tmpStruct));
948:     PetscCallMPI(MPI_Type_create_resized(tmpStruct, 0, sizeof(struct petsc_mpiu_scalar_int), &MPIU_SCALAR_INT));
949:     PetscCallMPI(MPI_Type_free(&tmpStruct));
950:     PetscCallMPI(MPI_Type_commit(&MPIU_SCALAR_INT));
951:   }
952: #endif

954: #if defined(PETSC_USE_64BIT_INDICES)
955:   PetscCallMPI(MPI_Type_contiguous(2, MPIU_INT, &MPIU_2INT));
956:   PetscCallMPI(MPI_Type_commit(&MPIU_2INT));
957: #endif
958:   PetscCallMPI(MPI_Type_contiguous(4, MPI_INT, &MPI_4INT));
959:   PetscCallMPI(MPI_Type_commit(&MPI_4INT));
960:   PetscCallMPI(MPI_Type_contiguous(4, MPIU_INT, &MPIU_4INT));
961:   PetscCallMPI(MPI_Type_commit(&MPIU_4INT));

963:   /*
964:      Attributes to be set on PETSc communicators
965:   */
966:   PetscCallMPI(MPI_Comm_create_keyval(MPI_COMM_NULL_COPY_FN, Petsc_Counter_Attr_Delete_Fn, &Petsc_Counter_keyval, (void *)0));
967:   PetscCallMPI(MPI_Comm_create_keyval(MPI_COMM_NULL_COPY_FN, Petsc_InnerComm_Attr_Delete_Fn, &Petsc_InnerComm_keyval, (void *)0));
968:   PetscCallMPI(MPI_Comm_create_keyval(MPI_COMM_NULL_COPY_FN, Petsc_OuterComm_Attr_Delete_Fn, &Petsc_OuterComm_keyval, (void *)0));
969:   PetscCallMPI(MPI_Comm_create_keyval(MPI_COMM_NULL_COPY_FN, Petsc_ShmComm_Attr_Delete_Fn, &Petsc_ShmComm_keyval, (void *)0));
970:   PetscCallMPI(MPI_Comm_create_keyval(MPI_COMM_NULL_COPY_FN, MPI_COMM_NULL_DELETE_FN, &Petsc_CreationIdx_keyval, (void *)0));
971:   PetscCallMPI(MPI_Comm_create_keyval(MPI_COMM_NULL_COPY_FN, MPI_COMM_NULL_DELETE_FN, &Petsc_Garbage_HMap_keyval, (void *)0));

973: #if defined(PETSC_HAVE_FORTRAN)
974:   if (ftn) PetscCall(PetscInitFortran_Private(readarguments, file, len));
975:   else
976: #endif
977:     PetscCall(PetscOptionsInsert(NULL, &PetscGlobalArgc, &PetscGlobalArgs, file));

979:   /* call a second time so it can look in the options database */
980:   PetscCall(PetscErrorPrintfInitialize());

982:   /*
983:      Check system options and print help
984:   */
985:   PetscCall(PetscOptionsCheckInitial_Private(help));

987:   /*
988:     Creates the logging data structures; this is enabled even if logging is not turned on
989:     This is the last thing we do before returning to the user code to prevent having the
990:     logging numbers contaminated by any startup time associated with MPI
991:   */
992: #if defined(PETSC_USE_LOG)
993:   PetscCall(PetscLogInitialize());
994: #endif

996:   /*
997:    Initialize PetscDevice and PetscDeviceContext

999:    Note to any future devs thinking of moving this, proper initialization requires:
1000:    1. MPI initialized
1001:    2. Options DB initialized
1002:    3. Petsc error handling initialized, specifically signal handlers. This expects to set up
1003:       its own SIGSEV handler via the push/pop interface.
1004:    4. Logging initialized
1005:   */
1006:   PetscCall(PetscDeviceInitializeFromOptions_Internal(PETSC_COMM_WORLD));

1008: #if PetscDefined(HAVE_VIENNACL)
1009:   flg = PETSC_FALSE;
1010:   PetscCall(PetscOptionsHasName(NULL, NULL, "-log_summary", &flg));
1011:   if (!flg) PetscCall(PetscOptionsHasName(NULL, NULL, "-log_view", &flg));
1012:   if (!flg) PetscCall(PetscOptionsGetBool(NULL, NULL, "-viennacl_synchronize", &flg, NULL));
1013:   PetscViennaCLSynchronize = flg;
1014:   PetscCall(PetscViennaCLInit());
1015: #endif

1017:   PetscCall(PetscCitationsInitialize());

1019: #if defined(PETSC_HAVE_SAWS)
1020:   PetscCall(PetscInitializeSAWs(ftn ? NULL : help));
1021:   flg = PETSC_FALSE;
1022:   PetscCall(PetscOptionsHasName(NULL, NULL, "-stack_view", &flg));
1023:   if (flg) PetscCall(PetscStackViewSAWs());
1024: #endif

1026:   /*
1027:      Load the dynamic libraries (on machines that support them), this registers all
1028:      the solvers etc. (On non-dynamic machines this initializes the PetscDraw and PetscViewer classes)
1029:   */
1030:   PetscCall(PetscInitialize_DynamicLibraries());

1032:   PetscCallMPI(MPI_Comm_size(PETSC_COMM_WORLD, &size));
1033:   PetscCall(PetscInfo(NULL, "PETSc successfully started: number of processors = %d\n", size));
1034:   PetscCall(PetscGetHostName(hostname, sizeof(hostname)));
1035:   PetscCall(PetscInfo(NULL, "Running on machine: %s\n", hostname));
1036: #if defined(PETSC_HAVE_OPENMP)
1037:   {
1038:     PetscBool omp_view_flag;
1039:     char     *threads = getenv("OMP_NUM_THREADS");

1041:     if (threads) {
1042:       PetscCall(PetscInfo(NULL, "Number of OpenMP threads %s (as given by OMP_NUM_THREADS)\n", threads));
1043:       (void)sscanf(threads, "%" PetscInt_FMT, &PetscNumOMPThreads);
1044:     } else {
1045:       PetscNumOMPThreads = (PetscInt)omp_get_max_threads();
1046:       PetscCall(PetscInfo(NULL, "Number of OpenMP threads %" PetscInt_FMT " (as given by omp_get_max_threads())\n", PetscNumOMPThreads));
1047:     }
1048:     PetscOptionsBegin(PETSC_COMM_WORLD, NULL, "OpenMP options", "Sys");
1049:     PetscCall(PetscOptionsInt("-omp_num_threads", "Number of OpenMP threads to use (can also use environmental variable OMP_NUM_THREADS", "None", PetscNumOMPThreads, &PetscNumOMPThreads, &flg));
1050:     PetscCall(PetscOptionsName("-omp_view", "Display OpenMP number of threads", NULL, &omp_view_flag));
1051:     PetscOptionsEnd();
1052:     if (flg) {
1053:       PetscCall(PetscInfo(NULL, "Number of OpenMP theads %" PetscInt_FMT " (given by -omp_num_threads)\n", PetscNumOMPThreads));
1054:       omp_set_num_threads((int)PetscNumOMPThreads);
1055:     }
1056:     if (omp_view_flag) PetscCall(PetscPrintf(PETSC_COMM_WORLD, "OpenMP: number of threads %" PetscInt_FMT "\n", PetscNumOMPThreads));
1057:   }
1058: #endif

1060: #if defined(PETSC_USE_PETSC_MPI_EXTERNAL32)
1061:   /*
1062:       Tell MPI about our own data representation converter, this would/should be used if extern32 is not supported by the MPI

1064:       Currently not used because it is not supported by MPICH.
1065:   */
1066:   if (!PetscBinaryBigEndian()) PetscCallMPI(MPI_Register_datarep((char *)"petsc", PetscDataRep_read_conv_fn, PetscDataRep_write_conv_fn, PetscDataRep_extent_fn, NULL));
1067: #endif

1069: #if defined(PETSC_SERIALIZE_FUNCTIONS)
1070:   PetscCall(PetscFPTCreate(10000));
1071: #endif

1073: #if defined(PETSC_HAVE_HWLOC)
1074:   {
1075:     PetscViewer viewer;
1076:     PetscCall(PetscOptionsGetViewer(PETSC_COMM_WORLD, NULL, NULL, "-process_view", &viewer, NULL, &flg));
1077:     if (flg) {
1078:       PetscCall(PetscProcessPlacementView(viewer));
1079:       PetscCall(PetscViewerDestroy(&viewer));
1080:     }
1081:   }
1082: #endif

1084:   flg = PETSC_TRUE;
1085:   PetscCall(PetscOptionsGetBool(NULL, NULL, "-viewfromoptions", &flg, NULL));
1086:   if (!flg) PetscCall(PetscOptionsPushGetViewerOff(PETSC_TRUE));

1088: #if defined(PETSC_HAVE_ADIOS)
1089:   PetscCallExternal(adios_init_noxml, PETSC_COMM_WORLD);
1090:   PetscCallExternal(adios_declare_group, &Petsc_adios_group, "PETSc", "", adios_stat_default);
1091:   PetscCallExternal(adios_select_method, Petsc_adios_group, "MPI", "", "");
1092:   PetscCallExternal(adios_read_init_method, ADIOS_READ_METHOD_BP, PETSC_COMM_WORLD, "");
1093: #endif

1095: #if defined(__VALGRIND_H)
1096:   PETSC_RUNNING_ON_VALGRIND = RUNNING_ON_VALGRIND ? PETSC_TRUE : PETSC_FALSE;
1097:   #if defined(PETSC_USING_DARWIN) && defined(PETSC_BLASLAPACK_SDOT_RETURNS_DOUBLE)
1098:   if (PETSC_RUNNING_ON_VALGRIND) PetscCall(PetscPrintf(PETSC_COMM_WORLD, "WARNING: Running valgrind with the MacOS native BLAS and LAPACK can fail. If it fails suggest configuring with --download-fblaslapack or --download-f2cblaslapack"));
1099:   #endif
1100: #endif
1101:   /*
1102:       Set flag that we are completely initialized
1103:   */
1104:   PetscInitializeCalled = PETSC_TRUE;

1106:   PetscCall(PetscOptionsHasName(NULL, NULL, "-python", &flg));
1107:   if (flg) PetscCall(PetscPythonInitialize(NULL, NULL));

1109:   PetscCall(PetscOptionsHasName(NULL, NULL, "-mpi_linear_solver_server", &flg));
1110:   if (PetscDefined(USE_SINGLE_LIBRARY) && flg) PetscCall(PCMPIServerBegin());
1111:   else PetscCheck(!flg, PETSC_COMM_WORLD, PETSC_ERR_SUP, "PETSc configured using -with-single-library=0; -mpi_linear_solver_server not supported in that case");
1112:   PetscFunctionReturn(PETSC_SUCCESS);
1113: }

1115: /*@C
1116:    PetscInitialize - Initializes the PETSc database and MPI.
1117:    `PetscInitialize()` calls MPI_Init() if that has yet to be called,
1118:    so this routine should always be called near the beginning of
1119:    your program -- usually the very first line!

1121:    Collective on `MPI_COMM_WORLD` or `PETSC_COMM_WORLD` if it has been set

1123:    Input Parameters:
1124: +  argc - count of number of command line arguments
1125: .  args - the command line arguments
1126: .  file - [optional] PETSc database file, append ":yaml" to filename to specify YAML options format.
1127:           Use NULL or empty string to not check for code specific file.
1128:           Also checks ~/.petscrc, .petscrc and petscrc.
1129:           Use -skip_petscrc in the code specific file (or command line) to skip ~/.petscrc, .petscrc and petscrc files.
1130: -  help - [optional] Help message to print, use NULL for no message

1132:    If you wish PETSc code to run ONLY on a subcommunicator of `MPI_COMM_WORLD`, create that
1133:    communicator first and assign it to `PETSC_COMM_WORLD` BEFORE calling `PetscInitialize()`. Thus if you are running a
1134:    four process job and two processes will run PETSc and have `PetscInitialize()` and PetscFinalize() and two process will not,
1135:    then do this. If ALL processes in the job are using `PetscInitialize()` and `PetscFinalize()` then you don't need to do this, even
1136:    if different subcommunicators of the job are doing different things with PETSc.

1138:    Options Database Keys:
1139: +  -help [intro] - prints help method for each option; if intro is given the program stops after printing the introductory help message
1140: .  -start_in_debugger [noxterm,dbx,xdb,gdb,...] - Starts program in debugger
1141: .  -on_error_attach_debugger [noxterm,dbx,xdb,gdb,...] - Starts debugger when error detected
1142: .  -on_error_emacs <machinename> - causes emacsclient to jump to error file
1143: .  -on_error_abort - calls `abort()` when error detected (no traceback)
1144: .  -on_error_mpiabort - calls `MPI_abort()` when error detected
1145: .  -error_output_stdout - prints PETSc error messages to stdout instead of the default stderr
1146: .  -error_output_none - does not print the error messages (but handles errors in the same way as if this was not called)
1147: .  -debugger_ranks [rank1,rank2,...] - Indicates ranks to start in debugger
1148: .  -debugger_pause [sleeptime] (in seconds) - Pauses debugger
1149: .  -stop_for_debugger - Print message on how to attach debugger manually to
1150:                         process and wait (-debugger_pause) seconds for attachment
1151: .  -malloc - Indicates use of PETSc error-checking malloc (on by default for debug version of libraries) (deprecated, use -malloc_debug)
1152: .  -malloc no - Indicates not to use error-checking malloc (deprecated, use -malloc_debug no)
1153: .  -malloc_debug - check for memory corruption at EVERY malloc or free, see `PetscMallocSetDebug()`
1154: .  -malloc_dump - prints a list of all unfreed memory at the end of the run
1155: .  -malloc_test - like -malloc_dump -malloc_debug, but only active for debugging builds, ignored in optimized build. May want to set in PETSC_OPTIONS environmental variable
1156: .  -malloc_view - show a list of all allocated memory during `PetscFinalize()`
1157: .  -malloc_view_threshold <t> - only list memory allocations of size greater than t with -malloc_view
1158: .  -malloc_requested_size - malloc logging will record the requested size rather than size after alignment
1159: .  -fp_trap - Stops on floating point exceptions
1160: .  -no_signal_handler - Indicates not to trap error signals
1161: .  -shared_tmp - indicates /tmp directory is shared by all processors
1162: .  -not_shared_tmp - each processor has own /tmp
1163: .  -tmp - alternative name of /tmp directory
1164: .  -get_total_flops - returns total flops done by all processors
1165: -  -memory_view - Print memory usage at end of run

1167:    Options Database Keys for Option Database:
1168: +  -skip_petscrc - skip the default option files ~/.petscrc, .petscrc, petscrc
1169: .  -options_monitor - monitor all set options to standard output for the whole program run
1170: -  -options_monitor_cancel - cancel options monitoring hard-wired using `PetscOptionsMonitorSet()`

1172:    Options -options_monitor_{all,cancel} are
1173:    position-independent and apply to all options set since the PETSc start.
1174:    They can be used also in option files.

1176:    See `PetscOptionsMonitorSet()` to do monitoring programmatically.

1178:    Options Database Keys for Profiling:
1179:    See Users-Manual: ch_profiling for details.
1180: +  -info [filename][:[~]<list,of,classnames>[:[~]self]] - Prints verbose information. See `PetscInfo()`.
1181: .  -log_sync - Enable barrier synchronization for all events. This option is useful to debug imbalance within each event,
1182:         however it slows things down and gives a distorted view of the overall runtime.
1183: .  -log_trace [filename] - Print traces of all PETSc calls to the screen (useful to determine where a program
1184:         hangs without running in the debugger).  See `PetscLogTraceBegin()`.
1185: .  -log_view [:filename:format] - Prints summary of flop and timing information to screen or file, see `PetscLogView()`.
1186: .  -log_view_memory - Includes in the summary from -log_view the memory used in each event, see `PetscLogView()`.
1187: .  -log_view_gpu_time - Includes in the summary from -log_view the time used in each GPU kernel, see `PetscLogView().
1188: .  -log_summary [filename] - (Deprecated, use -log_view) Prints summary of flop and timing information to screen. If the filename is specified the
1189:         summary is written to the file.  See PetscLogView().
1190: .  -log_exclude: <vec,mat,pc,ksp,snes> - excludes subset of object classes from logging
1191: .  -log_all [filename] - Logs extensive profiling information  See `PetscLogDump()`.
1192: .  -log [filename] - Logs basic profiline information  See `PetscLogDump()`.
1193: .  -log_mpe [filename] - Creates a logfile viewable by the utility Jumpshot (in MPICH distribution)
1194: .  -viewfromoptions on,off - Enable or disable `XXXSetFromOptions()` calls, for applications with many small solves turn this off
1195: -  -check_pointer_intensity 0,1,2 - if pointers are checked for validity (debug version only), using 0 will result in faster code

1197:     Only one of -log_trace, -log_view, -log_all, -log, or -log_mpe may be used at a time

1199:    Options Database Keys for SAWs:
1200: +  -saws_port <portnumber> - port number to publish SAWs data, default is 8080
1201: .  -saws_port_auto_select - have SAWs select a new unique port number where it publishes the data, the URL is printed to the screen
1202:                             this is useful when you are running many jobs that utilize SAWs at the same time
1203: .  -saws_log <filename> - save a log of all SAWs communication
1204: .  -saws_https <certificate file> - have SAWs use HTTPS instead of HTTP
1205: -  -saws_root <directory> - allow SAWs to have access to the given directory to search for requested resources and files

1207:    Environmental Variables:
1208: +   `PETSC_TMP` - alternative tmp directory
1209: .   `PETSC_SHARED_TMP` - tmp is shared by all processes
1210: .   `PETSC_NOT_SHARED_TMP` - each process has its own private tmp
1211: .   `PETSC_OPTIONS` - a string containing additional options for petsc in the form of command line "-key value" pairs
1212: .   `PETSC_OPTIONS_YAML` - (requires configuring PETSc to use libyaml) a string containing additional options for petsc in the form of a YAML document
1213: .   `PETSC_VIEWER_SOCKET_PORT` - socket number to use for socket viewer
1214: -   `PETSC_VIEWER_SOCKET_MACHINE` - machine to use for socket viewer to connect to

1216:    Level: beginner

1218:    Note:
1219:    If for some reason you must call `MPI_Init()` separately, call
1220:    it before `PetscInitialize()`.

1222:    Fortran Notes:
1223:    In Fortran this routine can be called with
1224: .vb
1225:        call PetscInitialize(ierr)
1226:        call PetscInitialize(file,ierr) or
1227:        call PetscInitialize(file,help,ierr)
1228: .ve

1230:    If your main program is C but you call Fortran code that also uses PETSc you need to call `PetscInitializeFortran()` soon after
1231:    calling `PetscInitialize()`.

1233:    Options Database Key for Developers:
1234: .  -checkfunctionlist - automatically checks that function lists associated with objects are correctly cleaned up. Produces messages of the form:
1235:     "function name: MatInodeGetInodeSizes_C" if they are not cleaned up. This flag is always set for the test harness (in framework.py)

1237: .seealso: `PetscFinalize()`, `PetscInitializeFortran()`, `PetscGetArgs()`, `PetscInitializeNoArguments()`, `PetscLogGpuTime()`
1238: @*/
1239: PetscErrorCode PetscInitialize(int *argc, char ***args, const char file[], const char help[])
1240: {
1241:   PetscMPIInt flag;
1242:   const char *prog = "Unknown Name", *mpienv;

1244:   PetscFunctionBegin;
1245:   if (PetscInitializeCalled) PetscFunctionReturn(PETSC_SUCCESS);
1246:   PetscCallMPI(MPI_Initialized(&flag));
1247:   if (!flag) {
1248:     PetscCheck(PETSC_COMM_WORLD == MPI_COMM_NULL, PETSC_COMM_SELF, PETSC_ERR_SUP, "You cannot set PETSC_COMM_WORLD if you have not initialized MPI first");
1249:     PetscCall(PetscPreMPIInit_Private());
1250: #if defined(PETSC_HAVE_MPI_INIT_THREAD)
1251:     {
1252:       PetscMPIInt PETSC_UNUSED provided;
1253:       PetscCallMPI(MPI_Init_thread(argc, args, PETSC_MPI_THREAD_REQUIRED, &provided));
1254:     }
1255: #else
1256:     PetscCallMPI(MPI_Init(argc, args));
1257: #endif
1258:     if (PetscDefined(HAVE_MPIUNI)) {
1259:       mpienv = getenv("PMI_SIZE");
1260:       if (!mpienv) mpienv = getenv("OMPI_COMM_WORLD_SIZE");
1261:       if (mpienv) {
1262:         PetscInt isize;
1263:         PetscCall(PetscOptionsStringToInt(mpienv, &isize));
1264:         if (isize != 1) printf("You are using an MPI-uni (sequential) install of PETSc but trying to launch parallel jobs; you need full MPI version of PETSc\n");
1265:         PetscCheck(isize == 1, MPI_COMM_SELF, PETSC_ERR_MPI, "You are using an MPI-uni (sequential) install of PETSc but trying to launch parallel jobs; you need full MPI version of PETSc");
1266:       }
1267:     }
1268:     PetscBeganMPI = PETSC_TRUE;
1269:   }

1271:   if (argc && *argc) prog = **args;
1272:   if (argc && args) {
1273:     PetscGlobalArgc = *argc;
1274:     PetscGlobalArgs = *args;
1275:   }
1276:   PetscCall(PetscInitialize_Common(prog, file, help, PETSC_FALSE, PETSC_FALSE, 0));
1277:   PetscFunctionReturn(PETSC_SUCCESS);
1278: }

1280: #if PetscDefined(USE_LOG)
1281: PETSC_INTERN PetscObject *PetscObjects;
1282: PETSC_INTERN PetscInt     PetscObjectsCounts;
1283: PETSC_INTERN PetscInt     PetscObjectsMaxCounts;
1284: PETSC_INTERN PetscBool    PetscObjectsLog;
1285: #endif

1287: /*
1288:     Frees all the MPI types and operations that PETSc may have created
1289: */
1290: PetscErrorCode PetscFreeMPIResources(void)
1291: {
1292:   PetscFunctionBegin;
1293: #if defined(PETSC_HAVE_REAL___FLOAT128)
1294:   PetscCallMPI(MPI_Type_free(&MPIU___FLOAT128));
1295:   #if defined(PETSC_HAVE_COMPLEX)
1296:   PetscCallMPI(MPI_Type_free(&MPIU___COMPLEX128));
1297:   #endif
1298: #endif
1299: #if defined(PETSC_HAVE_REAL___FP16)
1300:   PetscCallMPI(MPI_Type_free(&MPIU___FP16));
1301: #endif

1303: #if defined(PETSC_USE_REAL___FLOAT128) || defined(PETSC_USE_REAL___FP16)
1304:   PetscCallMPI(MPI_Op_free(&MPIU_SUM));
1305:   PetscCallMPI(MPI_Op_free(&MPIU_MAX));
1306:   PetscCallMPI(MPI_Op_free(&MPIU_MIN));
1307: #elif defined(PETSC_HAVE_REAL___FLOAT128) || defined(PETSC_HAVE_REAL___FP16)
1308:   PetscCallMPI(MPI_Op_free(&MPIU_SUM___FP16___FLOAT128));
1309: #endif

1311:   PetscCallMPI(MPI_Type_free(&MPIU_2SCALAR));
1312:   PetscCallMPI(MPI_Type_free(&MPIU_REAL_INT));
1313:   PetscCallMPI(MPI_Type_free(&MPIU_SCALAR_INT));
1314: #if defined(PETSC_USE_64BIT_INDICES)
1315:   PetscCallMPI(MPI_Type_free(&MPIU_2INT));
1316: #endif
1317:   PetscCallMPI(MPI_Type_free(&MPI_4INT));
1318:   PetscCallMPI(MPI_Type_free(&MPIU_4INT));
1319:   PetscCallMPI(MPI_Op_free(&MPIU_MAXSUM_OP));
1320:   PetscCallMPI(MPI_Op_free(&Petsc_Garbage_SetIntersectOp));
1321:   PetscFunctionReturn(PETSC_SUCCESS);
1322: }

1324: #if PetscDefined(USE_LOG)
1325: PETSC_INTERN PetscErrorCode PetscLogFinalize(void);
1326: #endif

1328: /*@C
1329:    PetscFinalize - Checks for options to be called at the conclusion
1330:    of the program. `MPI_Finalize()` is called only if the user had not
1331:    called `MPI_Init()` before calling `PetscInitialize()`.

1333:    Collective on `PETSC_COMM_WORLD`

1335:    Options Database Keys:
1336: +  -options_view - Calls `PetscOptionsView()`
1337: .  -options_left - Prints unused options that remain in the database
1338: .  -objects_dump [all] - Prints list of objects allocated by the user that have not been freed, the option all cause all outstanding objects to be listed
1339: .  -mpidump - Calls PetscMPIDump()
1340: .  -malloc_dump <optional filename> - Calls `PetscMallocDump()`, displays all memory allocated that has not been freed
1341: .  -malloc_info - Prints total memory usage
1342: -  -malloc_view <optional filename> - Prints list of all memory allocated and where

1344:    Level: beginner

1346:    Note:
1347:    See `PetscInitialize()` for other runtime options.

1349: .seealso: `PetscInitialize()`, `PetscOptionsView()`, `PetscMallocDump()`, `PetscMPIDump()`, `PetscEnd()`
1350: @*/
1351: PetscErrorCode PetscFinalize(void)
1352: {
1353:   PetscMPIInt rank;
1354:   PetscInt    nopt;
1355:   PetscBool   flg1 = PETSC_FALSE, flg2 = PETSC_FALSE, flg3 = PETSC_FALSE;
1356:   PetscBool   flg;
1357: #if defined(PETSC_USE_LOG)
1358:   char mname[PETSC_MAX_PATH_LEN];
1359: #endif

1361:   PetscFunctionBegin;
1362:   PetscCheck(PetscInitializeCalled, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "PetscInitialize() must be called before PetscFinalize()");
1363:   PetscCall(PetscInfo(NULL, "PetscFinalize() called\n"));

1365:   PetscCall(PetscOptionsHasName(NULL, NULL, "-mpi_linear_solver_server", &flg));
1366:   if (PetscDefined(USE_SINGLE_LIBRARY) && flg) PetscCall(PCMPIServerEnd());

1368:   /* Clean up Garbage automatically on COMM_SELF and COMM_WORLD at finalize */
1369:   {
1370:     union
1371:     {
1372:       MPI_Comm comm;
1373:       void    *ptr;
1374:     } ucomm;
1375:     PetscMPIInt flg;
1376:     void       *tmp;

1378:     PetscCallMPI(MPI_Comm_get_attr(PETSC_COMM_SELF, Petsc_InnerComm_keyval, &ucomm, &flg));
1379:     if (flg) PetscCallMPI(MPI_Comm_get_attr(ucomm.comm, Petsc_Garbage_HMap_keyval, &tmp, &flg));
1380:     if (flg) PetscCall(PetscGarbageCleanup(PETSC_COMM_SELF));
1381:     PetscCallMPI(MPI_Comm_get_attr(PETSC_COMM_WORLD, Petsc_InnerComm_keyval, &ucomm, &flg));
1382:     if (flg) PetscCallMPI(MPI_Comm_get_attr(ucomm.comm, Petsc_Garbage_HMap_keyval, &tmp, &flg));
1383:     if (flg) PetscCall(PetscGarbageCleanup(PETSC_COMM_WORLD));
1384:   }

1386:   PetscCallMPI(MPI_Comm_rank(PETSC_COMM_WORLD, &rank));
1387: #if defined(PETSC_HAVE_ADIOS)
1388:   PetscCallExternal(adios_read_finalize_method, ADIOS_READ_METHOD_BP_AGGREGATE);
1389:   PetscCallExternal(adios_finalize, rank);
1390: #endif
1391:   PetscCall(PetscOptionsHasName(NULL, NULL, "-citations", &flg));
1392:   if (flg) {
1393:     char *cits, filename[PETSC_MAX_PATH_LEN];
1394:     FILE *fd = PETSC_STDOUT;

1396:     PetscCall(PetscOptionsGetString(NULL, NULL, "-citations", filename, sizeof(filename), NULL));
1397:     if (filename[0]) PetscCall(PetscFOpen(PETSC_COMM_WORLD, filename, "w", &fd));
1398:     PetscCall(PetscSegBufferGet(PetscCitationsList, 1, &cits));
1399:     cits[0] = 0;
1400:     PetscCall(PetscSegBufferExtractAlloc(PetscCitationsList, &cits));
1401:     PetscCall(PetscFPrintf(PETSC_COMM_WORLD, fd, "If you publish results based on this computation please cite the following:\n"));
1402:     PetscCall(PetscFPrintf(PETSC_COMM_WORLD, fd, "===========================================================================\n"));
1403:     PetscCall(PetscFPrintf(PETSC_COMM_WORLD, fd, "%s", cits));
1404:     PetscCall(PetscFPrintf(PETSC_COMM_WORLD, fd, "===========================================================================\n"));
1405:     PetscCall(PetscFClose(PETSC_COMM_WORLD, fd));
1406:     PetscCall(PetscFree(cits));
1407:   }
1408:   PetscCall(PetscSegBufferDestroy(&PetscCitationsList));

1410: #if defined(PETSC_HAVE_SSL) && defined(PETSC_USE_SOCKET_VIEWER)
1411:   /* TextBelt is run for testing purposes only, please do not use this feature often */
1412:   {
1413:     PetscInt nmax = 2;
1414:     char   **buffs;
1415:     PetscCall(PetscMalloc1(2, &buffs));
1416:     PetscCall(PetscOptionsGetStringArray(NULL, NULL, "-textbelt", buffs, &nmax, &flg1));
1417:     if (flg1) {
1418:       PetscCheck(nmax, PETSC_COMM_WORLD, PETSC_ERR_USER, "-textbelt requires either the phone number or number,\"message\"");
1419:       if (nmax == 1) {
1420:         size_t len = 128;
1421:         PetscCall(PetscMalloc1(len, &buffs[1]));
1422:         PetscCall(PetscGetProgramName(buffs[1], 32));
1423:         PetscCall(PetscStrlcat(buffs[1], " has completed", len));
1424:       }
1425:       PetscCall(PetscTextBelt(PETSC_COMM_WORLD, buffs[0], buffs[1], NULL));
1426:       PetscCall(PetscFree(buffs[0]));
1427:       PetscCall(PetscFree(buffs[1]));
1428:     }
1429:     PetscCall(PetscFree(buffs));
1430:   }
1431:   {
1432:     PetscInt nmax = 2;
1433:     char   **buffs;
1434:     PetscCall(PetscMalloc1(2, &buffs));
1435:     PetscCall(PetscOptionsGetStringArray(NULL, NULL, "-tellmycell", buffs, &nmax, &flg1));
1436:     if (flg1) {
1437:       PetscCheck(nmax, PETSC_COMM_WORLD, PETSC_ERR_USER, "-tellmycell requires either the phone number or number,\"message\"");
1438:       if (nmax == 1) {
1439:         size_t len = 128;
1440:         PetscCall(PetscMalloc1(len, &buffs[1]));
1441:         PetscCall(PetscGetProgramName(buffs[1], 32));
1442:         PetscCall(PetscStrlcat(buffs[1], " has completed", len));
1443:       }
1444:       PetscCall(PetscTellMyCell(PETSC_COMM_WORLD, buffs[0], buffs[1], NULL));
1445:       PetscCall(PetscFree(buffs[0]));
1446:       PetscCall(PetscFree(buffs[1]));
1447:     }
1448:     PetscCall(PetscFree(buffs));
1449:   }
1450: #endif

1452: #if defined(PETSC_SERIALIZE_FUNCTIONS)
1453:   PetscCall(PetscFPTDestroy());
1454: #endif

1456: #if defined(PETSC_HAVE_SAWS)
1457:   flg = PETSC_FALSE;
1458:   PetscCall(PetscOptionsGetBool(NULL, NULL, "-saw_options", &flg, NULL));
1459:   if (flg) PetscCall(PetscOptionsSAWsDestroy());
1460: #endif

1462: #if defined(PETSC_HAVE_X)
1463:   flg1 = PETSC_FALSE;
1464:   PetscCall(PetscOptionsGetBool(NULL, NULL, "-x_virtual", &flg1, NULL));
1465:   if (flg1) {
1466:     /*  this is a crude hack, but better than nothing */
1467:     PetscCall(PetscPOpen(PETSC_COMM_WORLD, NULL, "pkill -9 Xvfb", "r", NULL));
1468:   }
1469: #endif

1471: #if !defined(PETSC_HAVE_THREADSAFETY)
1472:   PetscCall(PetscOptionsGetBool(NULL, NULL, "-malloc_info", &flg2, NULL));
1473:   if (!flg2) {
1474:     flg2 = PETSC_FALSE;
1475:     PetscCall(PetscOptionsGetBool(NULL, NULL, "-memory_view", &flg2, NULL));
1476:   }
1477:   if (flg2) PetscCall(PetscMemoryView(PETSC_VIEWER_STDOUT_WORLD, "Summary of Memory Usage in PETSc\n"));
1478: #endif

1480: #if defined(PETSC_USE_LOG)
1481:   flg1 = PETSC_FALSE;
1482:   PetscCall(PetscOptionsGetBool(NULL, NULL, "-get_total_flops", &flg1, NULL));
1483:   if (flg1) {
1484:     PetscLogDouble flops = 0;
1485:     PetscCallMPI(MPI_Reduce(&petsc_TotalFlops, &flops, 1, MPI_DOUBLE, MPI_SUM, 0, PETSC_COMM_WORLD));
1486:     PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Total flops over all processors %g\n", flops));
1487:   }
1488: #endif

1490: #if defined(PETSC_USE_LOG)
1491:   #if defined(PETSC_HAVE_MPE)
1492:   mname[0] = 0;
1493:   PetscCall(PetscOptionsGetString(NULL, NULL, "-log_mpe", mname, sizeof(mname), &flg1));
1494:   if (flg1) {
1495:     if (mname[0]) PetscCall(PetscLogMPEDump(mname));
1496:     else PetscCall(PetscLogMPEDump(0));
1497:   }
1498:   #endif
1499: #endif

1501:   /*
1502:      Free all objects registered with PetscObjectRegisterDestroy() such as PETSC_VIEWER_XXX_().
1503:   */
1504:   PetscCall(PetscObjectRegisterDestroyAll());

1506: #if defined(PETSC_USE_LOG)
1507:   PetscCall(PetscOptionsPushGetViewerOff(PETSC_FALSE));
1508:   PetscCall(PetscLogViewFromOptions());
1509:   PetscCall(PetscOptionsPopGetViewerOff());

1511:   mname[0] = 0;
1512:   PetscCall(PetscOptionsGetString(NULL, NULL, "-log_summary", mname, sizeof(mname), &flg1));
1513:   if (flg1) {
1514:     PetscViewer viewer;
1515:     PetscCall((*PetscHelpPrintf)(PETSC_COMM_WORLD, "\n\n WARNING:   -log_summary is being deprecated; switch to -log_view\n\n\n"));
1516:     if (mname[0]) {
1517:       PetscCall(PetscViewerASCIIOpen(PETSC_COMM_WORLD, mname, &viewer));
1518:       PetscCall(PetscLogView(viewer));
1519:       PetscCall(PetscViewerDestroy(&viewer));
1520:     } else {
1521:       viewer = PETSC_VIEWER_STDOUT_WORLD;
1522:       PetscCall(PetscViewerPushFormat(viewer, PETSC_VIEWER_DEFAULT));
1523:       PetscCall(PetscLogView(viewer));
1524:       PetscCall(PetscViewerPopFormat(viewer));
1525:     }
1526:   }

1528:   /*
1529:      Free any objects created by the last block of code.
1530:   */
1531:   PetscCall(PetscObjectRegisterDestroyAll());

1533:   mname[0] = 0;
1534:   PetscCall(PetscOptionsGetString(NULL, NULL, "-log_all", mname, sizeof(mname), &flg1));
1535:   PetscCall(PetscOptionsGetString(NULL, NULL, "-log", mname, sizeof(mname), &flg2));
1536:   if (flg1 || flg2) PetscCall(PetscLogDump(mname));
1537: #endif

1539:   flg1 = PETSC_FALSE;
1540:   PetscCall(PetscOptionsGetBool(NULL, NULL, "-no_signal_handler", &flg1, NULL));
1541:   if (!flg1) PetscCall(PetscPopSignalHandler());
1542:   flg1 = PETSC_FALSE;
1543:   PetscCall(PetscOptionsGetBool(NULL, NULL, "-mpidump", &flg1, NULL));
1544:   if (flg1) PetscCall(PetscMPIDump(stdout));
1545:   flg1 = PETSC_FALSE;
1546:   flg2 = PETSC_FALSE;
1547:   /* preemptive call to avoid listing this option in options table as unused */
1548:   PetscCall(PetscOptionsHasName(NULL, NULL, "-malloc_dump", &flg1));
1549:   PetscCall(PetscOptionsHasName(NULL, NULL, "-objects_dump", &flg1));
1550:   PetscCall(PetscOptionsGetBool(NULL, NULL, "-options_view", &flg2, NULL));

1552:   if (flg2) {
1553:     PetscViewer viewer;
1554:     PetscCall(PetscViewerCreate(PETSC_COMM_WORLD, &viewer));
1555:     PetscCall(PetscViewerSetType(viewer, PETSCVIEWERASCII));
1556:     PetscCall(PetscOptionsView(NULL, viewer));
1557:     PetscCall(PetscViewerDestroy(&viewer));
1558:   }

1560:   /* to prevent PETSc -options_left from warning */
1561:   PetscCall(PetscOptionsHasName(NULL, NULL, "-nox", &flg1));
1562:   PetscCall(PetscOptionsHasName(NULL, NULL, "-nox_warning", &flg1));

1564:   flg3 = PETSC_FALSE; /* default value is required */
1565:   PetscCall(PetscOptionsGetBool(NULL, NULL, "-options_left", &flg3, &flg1));
1566:   if (PetscUnlikelyDebug(!flg1)) flg3 = PETSC_TRUE;
1567:   if (flg3) {
1568:     if (!flg2 && flg1) { /* have not yet printed the options */
1569:       PetscViewer viewer;
1570:       PetscCall(PetscViewerCreate(PETSC_COMM_WORLD, &viewer));
1571:       PetscCall(PetscViewerSetType(viewer, PETSCVIEWERASCII));
1572:       PetscCall(PetscOptionsView(NULL, viewer));
1573:       PetscCall(PetscViewerDestroy(&viewer));
1574:     }
1575:     PetscCall(PetscOptionsAllUsed(NULL, &nopt));
1576:     if (nopt) {
1577:       PetscCall(PetscPrintf(PETSC_COMM_WORLD, "WARNING! There are options you set that were not used!\n"));
1578:       PetscCall(PetscPrintf(PETSC_COMM_WORLD, "WARNING! could be spelling mistake, etc!\n"));
1579:       if (nopt == 1) {
1580:         PetscCall(PetscPrintf(PETSC_COMM_WORLD, "There is one unused database option. It is:\n"));
1581:       } else {
1582:         PetscCall(PetscPrintf(PETSC_COMM_WORLD, "There are %" PetscInt_FMT " unused database options. They are:\n", nopt));
1583:       }
1584:     } else if (flg3 && flg1) {
1585:       PetscCall(PetscPrintf(PETSC_COMM_WORLD, "There are no unused options.\n"));
1586:     }
1587:     PetscCall(PetscOptionsLeft(NULL));
1588:   }

1590: #if defined(PETSC_HAVE_SAWS)
1591:   if (!PetscGlobalRank) {
1592:     PetscCall(PetscStackSAWsViewOff());
1593:     PetscCallSAWs(SAWs_Finalize, ());
1594:   }
1595: #endif

1597: #if defined(PETSC_USE_LOG)
1598:   /*
1599:        List all objects the user may have forgot to free
1600:   */
1601:   if (PetscObjectsLog) {
1602:     PetscCall(PetscOptionsHasName(NULL, NULL, "-objects_dump", &flg1));
1603:     if (flg1) {
1604:       MPI_Comm local_comm;
1605:       char     string[64];

1607:       PetscCall(PetscOptionsGetString(NULL, NULL, "-objects_dump", string, sizeof(string), NULL));
1608:       PetscCallMPI(MPI_Comm_dup(PETSC_COMM_WORLD, &local_comm));
1609:       PetscCall(PetscSequentialPhaseBegin_Private(local_comm, 1));
1610:       PetscCall(PetscObjectsDump(stdout, (string[0] == 'a') ? PETSC_TRUE : PETSC_FALSE));
1611:       PetscCall(PetscSequentialPhaseEnd_Private(local_comm, 1));
1612:       PetscCallMPI(MPI_Comm_free(&local_comm));
1613:     }
1614:   }
1615: #endif

1617: #if defined(PETSC_USE_LOG)
1618:   PetscObjectsCounts    = 0;
1619:   PetscObjectsMaxCounts = 0;
1620:   PetscCall(PetscFree(PetscObjects));
1621: #endif

1623:   /*
1624:      Destroy any packages that registered a finalize
1625:   */
1626:   PetscCall(PetscRegisterFinalizeAll());

1628: #if defined(PETSC_USE_LOG)
1629:   PetscCall(PetscLogFinalize());
1630: #endif

1632:   /*
1633:      Print PetscFunctionLists that have not been properly freed
1634:   */
1635:   if (PetscPrintFunctionList) PetscCall(PetscFunctionListPrintAll());

1637:   if (petsc_history) {
1638:     PetscCall(PetscCloseHistoryFile(&petsc_history));
1639:     petsc_history = NULL;
1640:   }
1641:   PetscCall(PetscOptionsHelpPrintedDestroy(&PetscOptionsHelpPrintedSingleton));
1642:   PetscCall(PetscInfoDestroy());

1644: #if !defined(PETSC_HAVE_THREADSAFETY)
1645:   if (!(PETSC_RUNNING_ON_VALGRIND)) {
1646:     char  fname[PETSC_MAX_PATH_LEN];
1647:     char  sname[PETSC_MAX_PATH_LEN];
1648:     FILE *fd;
1649:     int   err;

1651:     flg2 = PETSC_FALSE;
1652:     flg3 = PETSC_FALSE;
1653:     if (PetscDefined(USE_DEBUG)) PetscCall(PetscOptionsGetBool(NULL, NULL, "-malloc_test", &flg2, NULL));
1654:     PetscCall(PetscOptionsGetBool(NULL, NULL, "-malloc_debug", &flg3, NULL));
1655:     fname[0] = 0;
1656:     PetscCall(PetscOptionsGetString(NULL, NULL, "-malloc_dump", fname, sizeof(fname), &flg1));
1657:     if (flg1 && fname[0]) {
1658:       PetscCall(PetscSNPrintf(sname, sizeof(sname), "%s_%d", fname, rank));
1659:       fd = fopen(sname, "w");
1660:       PetscCheck(fd, PETSC_COMM_SELF, PETSC_ERR_FILE_OPEN, "Cannot open log file: %s", sname);
1661:       PetscCall(PetscMallocDump(fd));
1662:       err = fclose(fd);
1663:       PetscCheck(!err, PETSC_COMM_SELF, PETSC_ERR_SYS, "fclose() failed on file");
1664:     } else if (flg1 || flg2 || flg3) {
1665:       MPI_Comm local_comm;

1667:       PetscCallMPI(MPI_Comm_dup(PETSC_COMM_WORLD, &local_comm));
1668:       PetscCall(PetscSequentialPhaseBegin_Private(local_comm, 1));
1669:       PetscCall(PetscMallocDump(stdout));
1670:       PetscCall(PetscSequentialPhaseEnd_Private(local_comm, 1));
1671:       PetscCallMPI(MPI_Comm_free(&local_comm));
1672:     }
1673:     fname[0] = 0;
1674:     PetscCall(PetscOptionsGetString(NULL, NULL, "-malloc_view", fname, sizeof(fname), &flg1));
1675:     if (flg1 && fname[0]) {
1676:       PetscCall(PetscSNPrintf(sname, sizeof(sname), "%s_%d", fname, rank));
1677:       fd = fopen(sname, "w");
1678:       PetscCheck(fd, PETSC_COMM_SELF, PETSC_ERR_FILE_OPEN, "Cannot open log file: %s", sname);
1679:       PetscCall(PetscMallocView(fd));
1680:       err = fclose(fd);
1681:       PetscCheck(!err, PETSC_COMM_SELF, PETSC_ERR_SYS, "fclose() failed on file");
1682:     } else if (flg1) {
1683:       MPI_Comm local_comm;

1685:       PetscCallMPI(MPI_Comm_dup(PETSC_COMM_WORLD, &local_comm));
1686:       PetscCall(PetscSequentialPhaseBegin_Private(local_comm, 1));
1687:       PetscCall(PetscMallocView(stdout));
1688:       PetscCall(PetscSequentialPhaseEnd_Private(local_comm, 1));
1689:       PetscCallMPI(MPI_Comm_free(&local_comm));
1690:     }
1691:   }
1692: #endif

1694:   /*
1695:      Close any open dynamic libraries
1696:   */
1697:   PetscCall(PetscFinalize_DynamicLibraries());

1699:   /* Can be destroyed only after all the options are used */
1700:   PetscCall(PetscOptionsDestroyDefault());

1702:   PetscGlobalArgc = 0;
1703:   PetscGlobalArgs = NULL;

1705: #if defined(PETSC_HAVE_KOKKOS)
1706:   if (PetscBeganKokkos) {
1707:     PetscCall(PetscKokkosFinalize_Private());
1708:     PetscBeganKokkos       = PETSC_FALSE;
1709:     PetscKokkosInitialized = PETSC_FALSE;
1710:   }
1711: #endif

1713: #if defined(PETSC_HAVE_NVSHMEM)
1714:   if (PetscBeganNvshmem) {
1715:     PetscCall(PetscNvshmemFinalize());
1716:     PetscBeganNvshmem = PETSC_FALSE;
1717:   }
1718: #endif

1720:   PetscCall(PetscFreeMPIResources());

1722:   /*
1723:      Destroy any known inner MPI_Comm's and attributes pointing to them
1724:      Note this will not destroy any new communicators the user has created.

1726:      If all PETSc objects were not destroyed those left over objects will have hanging references to
1727:      the MPI_Comms that were freed; but that is ok because those PETSc objects will never be used again
1728:  */
1729:   {
1730:     PetscCommCounter *counter;
1731:     PetscMPIInt       flg;
1732:     MPI_Comm          icomm;
1733:     union
1734:     {
1735:       MPI_Comm comm;
1736:       void    *ptr;
1737:     } ucomm;
1738:     PetscCallMPI(MPI_Comm_get_attr(PETSC_COMM_SELF, Petsc_InnerComm_keyval, &ucomm, &flg));
1739:     if (flg) {
1740:       icomm = ucomm.comm;
1741:       PetscCallMPI(MPI_Comm_get_attr(icomm, Petsc_Counter_keyval, &counter, &flg));
1742:       PetscCheck(flg, PETSC_COMM_SELF, PETSC_ERR_ARG_CORRUPT, "Inner MPI_Comm does not have expected tag/name counter, problem with corrupted memory");

1744:       PetscCallMPI(MPI_Comm_delete_attr(PETSC_COMM_SELF, Petsc_InnerComm_keyval));
1745:       PetscCallMPI(MPI_Comm_delete_attr(icomm, Petsc_Counter_keyval));
1746:       PetscCallMPI(MPI_Comm_free(&icomm));
1747:     }
1748:     PetscCallMPI(MPI_Comm_get_attr(PETSC_COMM_WORLD, Petsc_InnerComm_keyval, &ucomm, &flg));
1749:     if (flg) {
1750:       icomm = ucomm.comm;
1751:       PetscCallMPI(MPI_Comm_get_attr(icomm, Petsc_Counter_keyval, &counter, &flg));
1752:       PetscCheck(flg, PETSC_COMM_WORLD, PETSC_ERR_ARG_CORRUPT, "Inner MPI_Comm does not have expected tag/name counter, problem with corrupted memory");

1754:       PetscCallMPI(MPI_Comm_delete_attr(PETSC_COMM_WORLD, Petsc_InnerComm_keyval));
1755:       PetscCallMPI(MPI_Comm_delete_attr(icomm, Petsc_Counter_keyval));
1756:       PetscCallMPI(MPI_Comm_free(&icomm));
1757:     }
1758:   }

1760:   PetscCallMPI(MPI_Comm_free_keyval(&Petsc_Counter_keyval));
1761:   PetscCallMPI(MPI_Comm_free_keyval(&Petsc_InnerComm_keyval));
1762:   PetscCallMPI(MPI_Comm_free_keyval(&Petsc_OuterComm_keyval));
1763:   PetscCallMPI(MPI_Comm_free_keyval(&Petsc_ShmComm_keyval));
1764:   PetscCallMPI(MPI_Comm_free_keyval(&Petsc_CreationIdx_keyval));
1765:   PetscCallMPI(MPI_Comm_free_keyval(&Petsc_Garbage_HMap_keyval));

1767:   // Free keyvals which may be silently created by some routines
1768:   if (Petsc_SharedWD_keyval != MPI_KEYVAL_INVALID) PetscCallMPI(MPI_Comm_free_keyval(&Petsc_SharedWD_keyval));
1769:   if (Petsc_SharedTmp_keyval != MPI_KEYVAL_INVALID) PetscCallMPI(MPI_Comm_free_keyval(&Petsc_SharedTmp_keyval));

1771:   PetscCall(PetscSpinlockDestroy(&PetscViewerASCIISpinLockOpen));
1772:   PetscCall(PetscSpinlockDestroy(&PetscViewerASCIISpinLockStdout));
1773:   PetscCall(PetscSpinlockDestroy(&PetscViewerASCIISpinLockStderr));
1774:   PetscCall(PetscSpinlockDestroy(&PetscCommSpinLock));

1776:   if (PetscBeganMPI) {
1777:     PetscMPIInt flag;
1778:     PetscCallMPI(MPI_Finalized(&flag));
1779:     PetscCheck(!flag, PETSC_COMM_SELF, PETSC_ERR_LIB, "MPI_Finalize() has already been called, even though MPI_Init() was called by PetscInitialize()");
1780:     /* wait until the very last moment to disable error handling */
1781:     PetscErrorHandlingInitialized = PETSC_FALSE;
1782:     PetscCallMPI(MPI_Finalize());
1783:   } else PetscErrorHandlingInitialized = PETSC_FALSE;

1785:   /*

1787:      Note: In certain cases PETSC_COMM_WORLD is never MPI_Comm_free()ed because
1788:    the communicator has some outstanding requests on it. Specifically if the
1789:    flag PETSC_HAVE_BROKEN_REQUEST_FREE is set (for IBM MPI implementation). See
1790:    src/vec/utils/vpscat.c. Due to this the memory allocated in PetscCommDuplicate()
1791:    is never freed as it should be. Thus one may obtain messages of the form
1792:    [ 1] 8 bytes PetscCommDuplicate() line 645 in src/sys/mpiu.c indicating the
1793:    memory was not freed.

1795: */
1796:   PetscCall(PetscMallocClear());
1797:   PetscCall(PetscStackReset());

1799:   PetscInitializeCalled = PETSC_FALSE;
1800:   PetscFinalizeCalled   = PETSC_TRUE;
1801: #if defined(PETSC_USE_COVERAGE)
1802:   /*
1803:      flush gcov, otherwise during CI the flushing continues into the next pipeline resulting in git not being able to delete directories since the
1804:      gcov files are still being added to the directories as git tries to remove the directories.
1805:    */
1806:   __gcov_flush();
1807: #endif
1808:   /* To match PetscFunctionBegin() at the beginning of this function */
1809:   PetscStackClearTop;
1810:   return PETSC_SUCCESS;
1811: }

1813: #if defined(PETSC_MISSING_LAPACK_lsame_)
1814: PETSC_EXTERN int lsame_(char *a, char *b)
1815: {
1816:   if (*a == *b) return 1;
1817:   if (*a + 32 == *b) return 1;
1818:   if (*a - 32 == *b) return 1;
1819:   return 0;
1820: }
1821: #endif

1823: #if defined(PETSC_MISSING_LAPACK_lsame)
1824: PETSC_EXTERN int lsame(char *a, char *b)
1825: {
1826:   if (*a == *b) return 1;
1827:   if (*a + 32 == *b) return 1;
1828:   if (*a - 32 == *b) return 1;
1829:   return 0;
1830: }
1831: #endif