Bug Summary

File:snes/utils/dmplexsnes.c
Warning:line 1406, column 58
Array access (from variable 'geoms') results in a null pointer dereference

Annotated Source Code

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1#include <petsc/private/dmpleximpl.h> /*I "petscdmplex.h" I*/
2#include <petsc/private/snesimpl.h> /*I "petscsnes.h" I*/
3#include <petscds.h>
4#include <petscblaslapack.h>
5#include <petsc/private/petscimpl.h>
6#include <petsc/private/petscfeimpl.h>
7
8/************************** Interpolation *******************************/
9
10static PetscErrorCode DMSNESConvertPlex(DM dm, DM *plex, PetscBool copy)
11{
12 PetscBool isPlex;
13 PetscErrorCode ierr;
14
15 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 15; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
16 ierr = PetscObjectTypeCompare((PetscObject) dm, DMPLEX"plex", &isPlex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),16,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
17 if (isPlex) {
18 *plex = dm;
19 ierr = PetscObjectReference((PetscObject) dm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),19,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
20 } else {
21 ierr = PetscObjectQuery((PetscObject) dm, "dm_plex", (PetscObject *) plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),21,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
22 if (!*plex) {
23 ierr = DMConvert(dm,DMPLEX"plex",plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),23,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
24 ierr = PetscObjectCompose((PetscObject) dm, "dm_plex", (PetscObject) *plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),24,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
25 if (copy) {
26 PetscInt i;
27 PetscObject obj;
28 const char *comps[3] = {"A","dmAux","dmCh"};
29
30 ierr = DMCopyDMSNES(dm, *plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),30,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
31 for (i = 0; i < 3; i++) {
32 ierr = PetscObjectQuery((PetscObject) dm, comps[i], &obj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),32,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
33 ierr = PetscObjectCompose((PetscObject) *plex, comps[i], obj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),33,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
34 }
35 }
36 } else {
37 ierr = PetscObjectReference((PetscObject) *plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),37,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
38 }
39 }
40 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
41}
42
43/*@C
44 DMInterpolationCreate - Creates a DMInterpolationInfo context
45
46 Collective
47
48 Input Parameter:
49. comm - the communicator
50
51 Output Parameter:
52. ctx - the context
53
54 Level: beginner
55
56.seealso: DMInterpolationEvaluate(), DMInterpolationAddPoints(), DMInterpolationDestroy()
57@*/
58PetscErrorCode DMInterpolationCreate(MPI_Comm comm, DMInterpolationInfo *ctx)
59{
60 PetscErrorCode ierr;
61
62 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 62; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
63 PetscValidPointer(ctx, 2)do { if (!ctx) return PetscError(((MPI_Comm)0x44000001),63,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",2); if (!
PetscCheckPointer(ctx,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),63,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",2);
} while (0);
64 ierr = PetscNew(ctx)PetscMallocA(1,PETSC_TRUE,64,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(1)*sizeof(**((ctx))),((ctx)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),64,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
65
66 (*ctx)->comm = comm;
67 (*ctx)->dim = -1;
68 (*ctx)->nInput = 0;
69 (*ctx)->points = NULL((void*)0);
70 (*ctx)->cells = NULL((void*)0);
71 (*ctx)->n = -1;
72 (*ctx)->coords = NULL((void*)0);
73 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
74}
75
76/*@C
77 DMInterpolationSetDim - Sets the spatial dimension for the interpolation context
78
79 Not collective
80
81 Input Parameters:
82+ ctx - the context
83- dim - the spatial dimension
84
85 Level: intermediate
86
87.seealso: DMInterpolationGetDim(), DMInterpolationEvaluate(), DMInterpolationAddPoints()
88@*/
89PetscErrorCode DMInterpolationSetDim(DMInterpolationInfo ctx, PetscInt dim)
90{
91 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 91; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
92 if ((dim < 1) || (dim > 3)) SETERRQ1(ctx->comm, PETSC_ERR_ARG_OUTOFRANGE, "Invalid dimension for points: %d", dim)return PetscError(ctx->comm,92,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,63,PETSC_ERROR_INITIAL,"Invalid dimension for points: %d",dim
);
93 ctx->dim = dim;
94 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
95}
96
97/*@C
98 DMInterpolationGetDim - Gets the spatial dimension for the interpolation context
99
100 Not collective
101
102 Input Parameter:
103. ctx - the context
104
105 Output Parameter:
106. dim - the spatial dimension
107
108 Level: intermediate
109
110.seealso: DMInterpolationSetDim(), DMInterpolationEvaluate(), DMInterpolationAddPoints()
111@*/
112PetscErrorCode DMInterpolationGetDim(DMInterpolationInfo ctx, PetscInt *dim)
113{
114 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 114; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
115 PetscValidIntPointer(dim, 2)do { if (!dim) return PetscError(((MPI_Comm)0x44000001),115,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",68
,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",2); if (!
PetscCheckPointer(dim,PETSC_INT)) return PetscError(((MPI_Comm
)0x44000001),115,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer to Int: Parameter # %d"
,2); } while (0);
116 *dim = ctx->dim;
117 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
118}
119
120/*@C
121 DMInterpolationSetDof - Sets the number of fields interpolated at a point for the interpolation context
122
123 Not collective
124
125 Input Parameters:
126+ ctx - the context
127- dof - the number of fields
128
129 Level: intermediate
130
131.seealso: DMInterpolationGetDof(), DMInterpolationEvaluate(), DMInterpolationAddPoints()
132@*/
133PetscErrorCode DMInterpolationSetDof(DMInterpolationInfo ctx, PetscInt dof)
134{
135 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 135; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
136 if (dof < 1) SETERRQ1(ctx->comm, PETSC_ERR_ARG_OUTOFRANGE, "Invalid number of components: %d", dof)return PetscError(ctx->comm,136,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,63,PETSC_ERROR_INITIAL,"Invalid number of components: %d",dof
);
137 ctx->dof = dof;
138 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
139}
140
141/*@C
142 DMInterpolationGetDof - Gets the number of fields interpolated at a point for the interpolation context
143
144 Not collective
145
146 Input Parameter:
147. ctx - the context
148
149 Output Parameter:
150. dof - the number of fields
151
152 Level: intermediate
153
154.seealso: DMInterpolationSetDof(), DMInterpolationEvaluate(), DMInterpolationAddPoints()
155@*/
156PetscErrorCode DMInterpolationGetDof(DMInterpolationInfo ctx, PetscInt *dof)
157{
158 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 158; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
159 PetscValidIntPointer(dof, 2)do { if (!dof) return PetscError(((MPI_Comm)0x44000001),159,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",68
,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",2); if (!
PetscCheckPointer(dof,PETSC_INT)) return PetscError(((MPI_Comm
)0x44000001),159,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer to Int: Parameter # %d"
,2); } while (0);
160 *dof = ctx->dof;
161 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
162}
163
164/*@C
165 DMInterpolationAddPoints - Add points at which we will interpolate the fields
166
167 Not collective
168
169 Input Parameters:
170+ ctx - the context
171. n - the number of points
172- points - the coordinates for each point, an array of size n * dim
173
174 Note: The coordinate information is copied.
175
176 Level: intermediate
177
178.seealso: DMInterpolationSetDim(), DMInterpolationEvaluate(), DMInterpolationCreate()
179@*/
180PetscErrorCode DMInterpolationAddPoints(DMInterpolationInfo ctx, PetscInt n, PetscReal points[])
181{
182 PetscErrorCode ierr;
183
184 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 184; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
185 if (ctx->dim < 0) SETERRQ(ctx->comm, PETSC_ERR_ARG_WRONGSTATE, "The spatial dimension has not been set")return PetscError(ctx->comm,185,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,73,PETSC_ERROR_INITIAL,"The spatial dimension has not been set"
);
186 if (ctx->points) SETERRQ(ctx->comm, PETSC_ERR_ARG_WRONGSTATE, "Cannot add points multiple times yet")return PetscError(ctx->comm,186,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,73,PETSC_ERROR_INITIAL,"Cannot add points multiple times yet"
);
187 ctx->nInput = n;
188
189 ierr = PetscMalloc1(n*ctx->dim, &ctx->points)PetscMallocA(1,PETSC_FALSE,189,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(n*ctx->dim)*sizeof(**(&ctx->points)),(&
ctx->points));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),189,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
190 ierr = PetscArraycpy(ctx->points, points, n*ctx->dim)((sizeof(*(ctx->points)) != sizeof(*(points))) || PetscMemcpy
(ctx->points,points,(n*ctx->dim)*sizeof(*(ctx->points
))));;CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),190,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
191 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
192}
193
194/*@C
195 DMInterpolationSetUp - Computea spatial indices that add in point location during interpolation
196
197 Collective on ctx
198
199 Input Parameters:
200+ ctx - the context
201. dm - the DM for the function space used for interpolation
202- redundantPoints - If PETSC_TRUE, all processes are passing in the same array of points. Otherwise, points need to be communicated among processes.
203
204 Level: intermediate
205
206.seealso: DMInterpolationEvaluate(), DMInterpolationAddPoints(), DMInterpolationCreate()
207@*/
208PetscErrorCode DMInterpolationSetUp(DMInterpolationInfo ctx, DM dm, PetscBool redundantPoints)
209{
210 MPI_Comm comm = ctx->comm;
211 PetscScalar *a;
212 PetscInt p, q, i;
213 PetscMPIInt rank, size;
214 PetscErrorCode ierr;
215 Vec pointVec;
216 PetscSF cellSF;
217 PetscLayout layout;
218 PetscReal *globalPoints;
219 PetscScalar *globalPointsScalar;
220 const PetscInt *ranges;
221 PetscMPIInt *counts, *displs;
222 const PetscSFNode *foundCells;
223 const PetscInt *foundPoints;
224 PetscMPIInt *foundProcs, *globalProcs;
225 PetscInt n, N, numFound;
226
227 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 227; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
228 PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),228,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",1); if (!PetscCheckPointer
(dm,PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),228
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),228,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),228,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",1
); } } while (0);
229 ierr = MPI_Comm_size(comm, &size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),229,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
230 ierr = MPI_Comm_rank(comm, &rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),230,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
231 if (ctx->dim < 0) SETERRQ(comm, PETSC_ERR_ARG_WRONGSTATE, "The spatial dimension has not been set")return PetscError(comm,231,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,73,PETSC_ERROR_INITIAL,"The spatial dimension has not been set"
);
232 /* Locate points */
233 n = ctx->nInput;
234 if (!redundantPoints) {
235 ierr = PetscLayoutCreate(comm, &layout);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),235,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
236 ierr = PetscLayoutSetBlockSize(layout, 1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),236,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
237 ierr = PetscLayoutSetLocalSize(layout, n);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),237,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
238 ierr = PetscLayoutSetUp(layout);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),238,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
239 ierr = PetscLayoutGetSize(layout, &N);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),239,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
240 /* Communicate all points to all processes */
241 ierr = PetscMalloc3(N*ctx->dim,&globalPoints,size,&counts,size,&displs)PetscMallocA(3,PETSC_FALSE,241,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(N*ctx->dim)*sizeof(**(&globalPoints)),(&
globalPoints),(size_t)(size)*sizeof(**(&counts)),(&counts
),(size_t)(size)*sizeof(**(&displs)),(&displs));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),241,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
242 ierr = PetscLayoutGetRanges(layout, &ranges);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),242,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
243 for (p = 0; p < size; ++p) {
244 counts[p] = (ranges[p+1] - ranges[p])*ctx->dim;
245 displs[p] = ranges[p]*ctx->dim;
246 }
247 ierr = MPI_Allgatherv(ctx->points, n*ctx->dim, MPIU_REAL, globalPoints, counts, displs, MPIU_REAL, comm)((petsc_gather_ct += PetscMPIParallelComm((comm)),0) || MPI_Allgatherv
((ctx->points),(n*ctx->dim),(((MPI_Datatype)0x4c00080b)
),(globalPoints),(counts),(displs),(((MPI_Datatype)0x4c00080b
)),(comm)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),247,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
248 } else {
249 N = n;
250 globalPoints = ctx->points;
251 counts = displs = NULL((void*)0);
252 layout = NULL((void*)0);
253 }
254#if 0
255 ierr = PetscMalloc3(N,&foundCells,N,&foundProcs,N,&globalProcs)PetscMallocA(3,PETSC_FALSE,255,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(N)*sizeof(**(&foundCells)),(&foundCells),(size_t
)(N)*sizeof(**(&foundProcs)),(&foundProcs),(size_t)(N
)*sizeof(**(&globalProcs)),(&globalProcs));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),255,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
256 /* foundCells[p] = m->locatePoint(&globalPoints[p*ctx->dim]); */
257#else
258#if defined(PETSC_USE_COMPLEX)
259 ierr = PetscMalloc1(N*ctx->dim,&globalPointsScalar)PetscMallocA(1,PETSC_FALSE,259,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(N*ctx->dim)*sizeof(**(&globalPointsScalar)),
(&globalPointsScalar));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),259,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
260 for (i=0; i<N*ctx->dim; i++) globalPointsScalar[i] = globalPoints[i];
261#else
262 globalPointsScalar = globalPoints;
263#endif
264 ierr = VecCreateSeqWithArray(PETSC_COMM_SELF((MPI_Comm)0x44000001), ctx->dim, N*ctx->dim, globalPointsScalar, &pointVec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),264,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
265 ierr = PetscMalloc2(N,&foundProcs,N,&globalProcs)PetscMallocA(2,PETSC_FALSE,265,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(N)*sizeof(**(&foundProcs)),(&foundProcs),(size_t
)(N)*sizeof(**(&globalProcs)),(&globalProcs));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),265,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
266 for (p = 0; p < N; ++p) {foundProcs[p] = size;}
267 cellSF = NULL((void*)0);
268 ierr = DMLocatePoints(dm, pointVec, DM_POINTLOCATION_REMOVE, &cellSF);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),268,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
269 ierr = PetscSFGetGraph(cellSF,NULL((void*)0),&numFound,&foundPoints,&foundCells);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),269,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
270#endif
271 for (p = 0; p < numFound; ++p) {
272 if (foundCells[p].index >= 0) foundProcs[foundPoints ? foundPoints[p] : p] = rank;
273 }
274 /* Let the lowest rank process own each point */
275 ierr = MPIU_Allreduce(foundProcs, globalProcs, N, MPI_INT, MPI_MIN, comm)(PetscAllreduceBarrierCheck(comm,N,275,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
) || ((petsc_allreduce_ct += PetscMPIParallelComm((comm)),0) ||
MPI_Allreduce((foundProcs),(globalProcs),(N),(((MPI_Datatype
)0x4c000405)),((MPI_Op)(0x58000002)),(comm))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),275,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
276 ctx->n = 0;
277 for (p = 0; p < N; ++p) {
278 if (globalProcs[p] == size) SETERRQ4(comm, PETSC_ERR_PLIB, "Point %d: %g %g %g not located in mesh", p, (double)globalPoints[p*ctx->dim+0], (double)(ctx->dim > 1 ? globalPoints[p*ctx->dim+1] : 0.0), (double)(ctx->dim > 2 ? globalPoints[p*ctx->dim+2] : 0.0))return PetscError(comm,278,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,77,PETSC_ERROR_INITIAL,"Point %d: %g %g %g not located in mesh"
,p,(double)globalPoints[p*ctx->dim+0],(double)(ctx->dim
> 1 ? globalPoints[p*ctx->dim+1] : 0.0),(double)(ctx->
dim > 2 ? globalPoints[p*ctx->dim+2] : 0.0));
279 else if (globalProcs[p] == rank) ctx->n++;
280 }
281 /* Create coordinates vector and array of owned cells */
282 ierr = PetscMalloc1(ctx->n, &ctx->cells)PetscMallocA(1,PETSC_FALSE,282,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(ctx->n)*sizeof(**(&ctx->cells)),(&ctx
->cells));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),282,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
283 ierr = VecCreate(comm, &ctx->coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),283,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
284 ierr = VecSetSizes(ctx->coords, ctx->n*ctx->dim, PETSC_DECIDE-1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),284,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
285 ierr = VecSetBlockSize(ctx->coords, ctx->dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),285,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
286 ierr = VecSetType(ctx->coords,VECSTANDARD"standard");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),286,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
287 ierr = VecGetArray(ctx->coords, &a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),287,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
288 for (p = 0, q = 0, i = 0; p < N; ++p) {
289 if (globalProcs[p] == rank) {
290 PetscInt d;
291
292 for (d = 0; d < ctx->dim; ++d, ++i) a[i] = globalPoints[p*ctx->dim+d];
293 ctx->cells[q] = foundCells[q].index;
294 ++q;
295 }
296 }
297 ierr = VecRestoreArray(ctx->coords, &a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),297,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
298#if 0
299 ierr = PetscFree3(foundCells,foundProcs,globalProcs)PetscFreeA(3,299,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,&(foundCells),&(foundProcs),&(globalProcs));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),299,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
300#else
301 ierr = PetscFree2(foundProcs,globalProcs)PetscFreeA(2,301,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,&(foundProcs),&(globalProcs));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),301,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
302 ierr = PetscSFDestroy(&cellSF);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),302,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
303 ierr = VecDestroy(&pointVec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),303,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
304#endif
305 if ((void*)globalPointsScalar != (void*)globalPoints) {ierr = PetscFree(globalPointsScalar)((*PetscTrFree)((void*)(globalPointsScalar),305,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
) || ((globalPointsScalar) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),305,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
306 if (!redundantPoints) {ierr = PetscFree3(globalPoints,counts,displs)PetscFreeA(3,306,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,&(globalPoints),&(counts),&(displs));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),306,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
307 ierr = PetscLayoutDestroy(&layout);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),307,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
308 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
309}
310
311/*@C
312 DMInterpolationGetCoordinates - Gets a Vec with the coordinates of each interpolation point
313
314 Collective on ctx
315
316 Input Parameter:
317. ctx - the context
318
319 Output Parameter:
320. coordinates - the coordinates of interpolation points
321
322 Note: The local vector entries correspond to interpolation points lying on this process, according to the associated DM. This is a borrowed vector that the user should not destroy.
323
324 Level: intermediate
325
326.seealso: DMInterpolationEvaluate(), DMInterpolationAddPoints(), DMInterpolationCreate()
327@*/
328PetscErrorCode DMInterpolationGetCoordinates(DMInterpolationInfo ctx, Vec *coordinates)
329{
330 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 330; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
331 PetscValidPointer(coordinates, 2)do { if (!coordinates) return PetscError(((MPI_Comm)0x44000001
),331,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",2); if
(!PetscCheckPointer(coordinates,PETSC_CHAR)) return PetscError
(((MPI_Comm)0x44000001),331,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",2);
} while (0);
332 if (!ctx->coords) SETERRQ(ctx->comm, PETSC_ERR_ARG_WRONGSTATE, "The interpolation context has not been setup.")return PetscError(ctx->comm,332,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,73,PETSC_ERROR_INITIAL,"The interpolation context has not been setup."
);
333 *coordinates = ctx->coords;
334 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
335}
336
337/*@C
338 DMInterpolationGetVector - Gets a Vec which can hold all the interpolated field values
339
340 Collective on ctx
341
342 Input Parameter:
343. ctx - the context
344
345 Output Parameter:
346. v - a vector capable of holding the interpolated field values
347
348 Note: This vector should be returned using DMInterpolationRestoreVector().
349
350 Level: intermediate
351
352.seealso: DMInterpolationRestoreVector(), DMInterpolationEvaluate(), DMInterpolationAddPoints(), DMInterpolationCreate()
353@*/
354PetscErrorCode DMInterpolationGetVector(DMInterpolationInfo ctx, Vec *v)
355{
356 PetscErrorCode ierr;
357
358 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 358; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
359 PetscValidPointer(v, 2)do { if (!v) return PetscError(((MPI_Comm)0x44000001),359,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",2); if (!
PetscCheckPointer(v,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),359,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",2);
} while (0);
360 if (!ctx->coords) SETERRQ(ctx->comm, PETSC_ERR_ARG_WRONGSTATE, "The interpolation context has not been setup.")return PetscError(ctx->comm,360,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,73,PETSC_ERROR_INITIAL,"The interpolation context has not been setup."
);
361 ierr = VecCreate(ctx->comm, v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),361,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
362 ierr = VecSetSizes(*v, ctx->n*ctx->dof, PETSC_DECIDE-1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),362,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
363 ierr = VecSetBlockSize(*v, ctx->dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),363,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
364 ierr = VecSetType(*v,VECSTANDARD"standard");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),364,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
365 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
366}
367
368/*@C
369 DMInterpolationRestoreVector - Returns a Vec which can hold all the interpolated field values
370
371 Collective on ctx
372
373 Input Parameters:
374+ ctx - the context
375- v - a vector capable of holding the interpolated field values
376
377 Level: intermediate
378
379.seealso: DMInterpolationGetVector(), DMInterpolationEvaluate(), DMInterpolationAddPoints(), DMInterpolationCreate()
380@*/
381PetscErrorCode DMInterpolationRestoreVector(DMInterpolationInfo ctx, Vec *v)
382{
383 PetscErrorCode ierr;
384
385 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 385; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
386 PetscValidPointer(v, 2)do { if (!v) return PetscError(((MPI_Comm)0x44000001),386,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",2); if (!
PetscCheckPointer(v,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),386,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",2);
} while (0);
387 if (!ctx->coords) SETERRQ(ctx->comm, PETSC_ERR_ARG_WRONGSTATE, "The interpolation context has not been setup.")return PetscError(ctx->comm,387,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,73,PETSC_ERROR_INITIAL,"The interpolation context has not been setup."
);
388 ierr = VecDestroy(v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),388,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
389 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
390}
391
392PETSC_STATIC_INLINEstatic inline PetscErrorCode DMInterpolate_Triangle_Private(DMInterpolationInfo ctx, DM dm, Vec xLocal, Vec v)
393{
394 PetscReal *v0, *J, *invJ, detJ;
395 const PetscScalar *coords;
396 PetscScalar *a;
397 PetscInt p;
398 PetscErrorCode ierr;
399
400 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 400; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
401 ierr = PetscMalloc3(ctx->dim,&v0,ctx->dim*ctx->dim,&J,ctx->dim*ctx->dim,&invJ)PetscMallocA(3,PETSC_FALSE,401,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(ctx->dim)*sizeof(**(&v0)),(&v0),(size_t)
(ctx->dim*ctx->dim)*sizeof(**(&J)),(&J),(size_t
)(ctx->dim*ctx->dim)*sizeof(**(&invJ)),(&invJ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),401,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
402 ierr = VecGetArrayRead(ctx->coords, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),402,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
403 ierr = VecGetArray(v, &a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),403,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
404 for (p = 0; p < ctx->n; ++p) {
405 PetscInt c = ctx->cells[p];
406 PetscScalar *x = NULL((void*)0);
407 PetscReal xi[4];
408 PetscInt d, f, comp;
409
410 ierr = DMPlexComputeCellGeometryFEM(dm, c, NULL((void*)0), v0, J, invJ, &detJ);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),410,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
411 if (detJ <= 0.0) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Invalid determinant %g for element %d", (double)detJ, c)return PetscError(((MPI_Comm)0x44000001),411,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,63,PETSC_ERROR_INITIAL,"Invalid determinant %g for element %d"
,(double)detJ,c);
412 ierr = DMPlexVecGetClosure(dm, NULL((void*)0), xLocal, c, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),412,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
413 for (comp = 0; comp < ctx->dof; ++comp) a[p*ctx->dof+comp] = x[0*ctx->dof+comp];
414
415 for (d = 0; d < ctx->dim; ++d) {
416 xi[d] = 0.0;
417 for (f = 0; f < ctx->dim; ++f) xi[d] += invJ[d*ctx->dim+f]*0.5*PetscRealPart(coords[p*ctx->dim+f] - v0[f])(coords[p*ctx->dim+f] - v0[f]);
418 for (comp = 0; comp < ctx->dof; ++comp) a[p*ctx->dof+comp] += PetscRealPart(x[(d+1)*ctx->dof+comp] - x[0*ctx->dof+comp])(x[(d+1)*ctx->dof+comp] - x[0*ctx->dof+comp])*xi[d];
419 }
420 ierr = DMPlexVecRestoreClosure(dm, NULL((void*)0), xLocal, c, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),420,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
421 }
422 ierr = VecRestoreArray(v, &a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),422,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
423 ierr = VecRestoreArrayRead(ctx->coords, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),423,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
424 ierr = PetscFree3(v0, J, invJ)PetscFreeA(3,424,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,&(v0),&(J),&(invJ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),424,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
425 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
426}
427
428PETSC_STATIC_INLINEstatic inline PetscErrorCode DMInterpolate_Tetrahedron_Private(DMInterpolationInfo ctx, DM dm, Vec xLocal, Vec v)
429{
430 PetscReal *v0, *J, *invJ, detJ;
431 const PetscScalar *coords;
432 PetscScalar *a;
433 PetscInt p;
434 PetscErrorCode ierr;
435
436 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 436; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
437 ierr = PetscMalloc3(ctx->dim,&v0,ctx->dim*ctx->dim,&J,ctx->dim*ctx->dim,&invJ)PetscMallocA(3,PETSC_FALSE,437,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(ctx->dim)*sizeof(**(&v0)),(&v0),(size_t)
(ctx->dim*ctx->dim)*sizeof(**(&J)),(&J),(size_t
)(ctx->dim*ctx->dim)*sizeof(**(&invJ)),(&invJ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),437,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
438 ierr = VecGetArrayRead(ctx->coords, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),438,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
439 ierr = VecGetArray(v, &a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),439,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
440 for (p = 0; p < ctx->n; ++p) {
441 PetscInt c = ctx->cells[p];
442 const PetscInt order[3] = {2, 1, 3};
443 PetscScalar *x = NULL((void*)0);
444 PetscReal xi[4];
445 PetscInt d, f, comp;
446
447 ierr = DMPlexComputeCellGeometryFEM(dm, c, NULL((void*)0), v0, J, invJ, &detJ);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),447,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
448 if (detJ <= 0.0) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Invalid determinant %g for element %d", (double)detJ, c)return PetscError(((MPI_Comm)0x44000001),448,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,63,PETSC_ERROR_INITIAL,"Invalid determinant %g for element %d"
,(double)detJ,c);
449 ierr = DMPlexVecGetClosure(dm, NULL((void*)0), xLocal, c, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),449,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
450 for (comp = 0; comp < ctx->dof; ++comp) a[p*ctx->dof+comp] = x[0*ctx->dof+comp];
451
452 for (d = 0; d < ctx->dim; ++d) {
453 xi[d] = 0.0;
454 for (f = 0; f < ctx->dim; ++f) xi[d] += invJ[d*ctx->dim+f]*0.5*PetscRealPart(coords[p*ctx->dim+f] - v0[f])(coords[p*ctx->dim+f] - v0[f]);
455 for (comp = 0; comp < ctx->dof; ++comp) a[p*ctx->dof+comp] += PetscRealPart(x[order[d]*ctx->dof+comp] - x[0*ctx->dof+comp])(x[order[d]*ctx->dof+comp] - x[0*ctx->dof+comp])*xi[d];
456 }
457 ierr = DMPlexVecRestoreClosure(dm, NULL((void*)0), xLocal, c, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),457,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
458 }
459 ierr = VecRestoreArray(v, &a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),459,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
460 ierr = VecRestoreArrayRead(ctx->coords, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),460,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
461 ierr = PetscFree3(v0, J, invJ)PetscFreeA(3,461,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,&(v0),&(J),&(invJ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),461,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
462 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
463}
464
465PETSC_STATIC_INLINEstatic inline PetscErrorCode QuadMap_Private(SNES snes, Vec Xref, Vec Xreal, void *ctx)
466{
467 const PetscScalar *vertices = (const PetscScalar*) ctx;
468 const PetscScalar x0 = vertices[0];
469 const PetscScalar y0 = vertices[1];
470 const PetscScalar x1 = vertices[2];
471 const PetscScalar y1 = vertices[3];
472 const PetscScalar x2 = vertices[4];
473 const PetscScalar y2 = vertices[5];
474 const PetscScalar x3 = vertices[6];
475 const PetscScalar y3 = vertices[7];
476 const PetscScalar f_1 = x1 - x0;
477 const PetscScalar g_1 = y1 - y0;
478 const PetscScalar f_3 = x3 - x0;
479 const PetscScalar g_3 = y3 - y0;
480 const PetscScalar f_01 = x2 - x1 - x3 + x0;
481 const PetscScalar g_01 = y2 - y1 - y3 + y0;
482 const PetscScalar *ref;
483 PetscScalar *real;
484 PetscErrorCode ierr;
485
486 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 486; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
487 ierr = VecGetArrayRead(Xref, &ref);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),487,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
488 ierr = VecGetArray(Xreal, &real);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),488,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
489 {
490 const PetscScalar p0 = ref[0];
491 const PetscScalar p1 = ref[1];
492
493 real[0] = x0 + f_1 * p0 + f_3 * p1 + f_01 * p0 * p1;
494 real[1] = y0 + g_1 * p0 + g_3 * p1 + g_01 * p0 * p1;
495 }
496 ierr = PetscLogFlops(28);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),496,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
497 ierr = VecRestoreArrayRead(Xref, &ref);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),497,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
498 ierr = VecRestoreArray(Xreal, &real);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),498,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
499 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
500}
501
502#include <petsc/private/dmimpl.h>
503PETSC_STATIC_INLINEstatic inline PetscErrorCode QuadJacobian_Private(SNES snes, Vec Xref, Mat J, Mat M, void *ctx)
504{
505 const PetscScalar *vertices = (const PetscScalar*) ctx;
506 const PetscScalar x0 = vertices[0];
507 const PetscScalar y0 = vertices[1];
508 const PetscScalar x1 = vertices[2];
509 const PetscScalar y1 = vertices[3];
510 const PetscScalar x2 = vertices[4];
511 const PetscScalar y2 = vertices[5];
512 const PetscScalar x3 = vertices[6];
513 const PetscScalar y3 = vertices[7];
514 const PetscScalar f_01 = x2 - x1 - x3 + x0;
515 const PetscScalar g_01 = y2 - y1 - y3 + y0;
516 const PetscScalar *ref;
517 PetscErrorCode ierr;
518
519 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 519; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
520 ierr = VecGetArrayRead(Xref, &ref);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),520,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
521 {
522 const PetscScalar x = ref[0];
523 const PetscScalar y = ref[1];
524 const PetscInt rows[2] = {0, 1};
525 PetscScalar values[4];
526
527 values[0] = (x1 - x0 + f_01*y) * 0.5; values[1] = (x3 - x0 + f_01*x) * 0.5;
528 values[2] = (y1 - y0 + g_01*y) * 0.5; values[3] = (y3 - y0 + g_01*x) * 0.5;
529 ierr = MatSetValues(J, 2, rows, 2, rows, values, INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),529,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
530 }
531 ierr = PetscLogFlops(30);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),531,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
532 ierr = VecRestoreArrayRead(Xref, &ref);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),532,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
533 ierr = MatAssemblyBegin(J, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),533,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
534 ierr = MatAssemblyEnd(J, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),534,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
535 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
536}
537
538PETSC_STATIC_INLINEstatic inline PetscErrorCode DMInterpolate_Quad_Private(DMInterpolationInfo ctx, DM dm, Vec xLocal, Vec v)
539{
540 DM dmCoord;
541 PetscFE fem = NULL((void*)0);
542 SNES snes;
543 KSP ksp;
544 PC pc;
545 Vec coordsLocal, r, ref, real;
546 Mat J;
547 const PetscScalar *coords;
548 PetscScalar *a;
549 PetscInt Nf, p;
550 const PetscInt dof = ctx->dof;
551 PetscErrorCode ierr;
552
553 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 553; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
554 ierr = DMGetNumFields(dm, &Nf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),554,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
555 if (Nf) {ierr = DMGetField(dm, 0, NULL((void*)0), (PetscObject *) &fem);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),555,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
556 ierr = DMGetCoordinatesLocal(dm, &coordsLocal);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),556,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
557 ierr = DMGetCoordinateDM(dm, &dmCoord);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),557,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
558 ierr = SNESCreate(PETSC_COMM_SELF((MPI_Comm)0x44000001), &snes);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),558,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
559 ierr = SNESSetOptionsPrefix(snes, "quad_interp_");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),559,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
560 ierr = VecCreate(PETSC_COMM_SELF((MPI_Comm)0x44000001), &r);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),560,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
561 ierr = VecSetSizes(r, 2, 2);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),561,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
562 ierr = VecSetType(r,dm->vectype);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),562,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
563 ierr = VecDuplicate(r, &ref);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),563,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
564 ierr = VecDuplicate(r, &real);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),564,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
565 ierr = MatCreate(PETSC_COMM_SELF((MPI_Comm)0x44000001), &J);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),565,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
566 ierr = MatSetSizes(J, 2, 2, 2, 2);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),566,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
567 ierr = MatSetType(J, MATSEQDENSE"seqdense");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),567,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
568 ierr = MatSetUp(J);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),568,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
569 ierr = SNESSetFunction(snes, r, QuadMap_Private, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),569,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
570 ierr = SNESSetJacobian(snes, J, J, QuadJacobian_Private, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),570,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
571 ierr = SNESGetKSP(snes, &ksp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),571,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
572 ierr = KSPGetPC(ksp, &pc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),572,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
573 ierr = PCSetType(pc, PCLU"lu");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),573,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
574 ierr = SNESSetFromOptions(snes);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),574,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
575
576 ierr = VecGetArrayRead(ctx->coords, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),576,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
577 ierr = VecGetArray(v, &a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),577,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
578 for (p = 0; p < ctx->n; ++p) {
579 PetscScalar *x = NULL((void*)0), *vertices = NULL((void*)0);
580 PetscScalar *xi;
581 PetscReal xir[2];
582 PetscInt c = ctx->cells[p], comp, coordSize, xSize;
583
584 /* Can make this do all points at once */
585 ierr = DMPlexVecGetClosure(dmCoord, NULL((void*)0), coordsLocal, c, &coordSize, &vertices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),585,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
586 if (4*2 != coordSize) SETERRQ2(ctx->comm, PETSC_ERR_ARG_SIZ, "Invalid closure size %d should be %d", coordSize, 4*2)return PetscError(ctx->comm,586,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,60,PETSC_ERROR_INITIAL,"Invalid closure size %d should be %d"
,coordSize,4*2);
587 ierr = DMPlexVecGetClosure(dm, NULL((void*)0), xLocal, c, &xSize, &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),587,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
588 ierr = SNESSetFunction(snes, NULL((void*)0), NULL((void*)0), (void*) vertices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),588,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
589 ierr = SNESSetJacobian(snes, NULL((void*)0), NULL((void*)0), NULL((void*)0), (void*) vertices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),589,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
590 ierr = VecGetArray(real, &xi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),590,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
591 xi[0] = coords[p*ctx->dim+0];
592 xi[1] = coords[p*ctx->dim+1];
593 ierr = VecRestoreArray(real, &xi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),593,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
594 ierr = SNESSolve(snes, real, ref);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),594,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
595 ierr = VecGetArray(ref, &xi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),595,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
596 xir[0] = PetscRealPart(xi[0])(xi[0]);
597 xir[1] = PetscRealPart(xi[1])(xi[1]);
598 if (4*dof != xSize) {
599 PetscReal *B;
600 PetscInt d;
601
602 xir[0] = 2.0*xir[0] - 1.0; xir[1] = 2.0*xir[1] - 1.0;
603 ierr = PetscFEGetTabulation(fem, 1, xir, &B, NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),603,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
604 for (comp = 0; comp < dof; ++comp) {
605 a[p*dof+comp] = 0.0;
606 for (d = 0; d < xSize/dof; ++d) {
607 a[p*dof+comp] += x[d*dof+comp]*B[d*dof+comp];
608 }
609 }
610 ierr = PetscFERestoreTabulation(fem, 1, xir, &B, NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),610,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
611 } else {
612 for (comp = 0; comp < dof; ++comp)
613 a[p*dof+comp] = x[0*dof+comp]*(1 - xir[0])*(1 - xir[1]) + x[1*dof+comp]*xir[0]*(1 - xir[1]) + x[2*dof+comp]*xir[0]*xir[1] + x[3*dof+comp]*(1 - xir[0])*xir[1];
614 }
615 ierr = VecRestoreArray(ref, &xi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),615,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
616 ierr = DMPlexVecRestoreClosure(dmCoord, NULL((void*)0), coordsLocal, c, &coordSize, &vertices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),616,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
617 ierr = DMPlexVecRestoreClosure(dm, NULL((void*)0), xLocal, c, &xSize, &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),617,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
618 }
619 ierr = VecRestoreArray(v, &a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),619,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
620 ierr = VecRestoreArrayRead(ctx->coords, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),620,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
621
622 ierr = SNESDestroy(&snes);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),622,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
623 ierr = VecDestroy(&r);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),623,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
624 ierr = VecDestroy(&ref);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),624,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
625 ierr = VecDestroy(&real);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),625,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
626 ierr = MatDestroy(&J);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),626,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
627 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
628}
629
630PETSC_STATIC_INLINEstatic inline PetscErrorCode HexMap_Private(SNES snes, Vec Xref, Vec Xreal, void *ctx)
631{
632 const PetscScalar *vertices = (const PetscScalar*) ctx;
633 const PetscScalar x0 = vertices[0];
634 const PetscScalar y0 = vertices[1];
635 const PetscScalar z0 = vertices[2];
636 const PetscScalar x1 = vertices[9];
637 const PetscScalar y1 = vertices[10];
638 const PetscScalar z1 = vertices[11];
639 const PetscScalar x2 = vertices[6];
640 const PetscScalar y2 = vertices[7];
641 const PetscScalar z2 = vertices[8];
642 const PetscScalar x3 = vertices[3];
643 const PetscScalar y3 = vertices[4];
644 const PetscScalar z3 = vertices[5];
645 const PetscScalar x4 = vertices[12];
646 const PetscScalar y4 = vertices[13];
647 const PetscScalar z4 = vertices[14];
648 const PetscScalar x5 = vertices[15];
649 const PetscScalar y5 = vertices[16];
650 const PetscScalar z5 = vertices[17];
651 const PetscScalar x6 = vertices[18];
652 const PetscScalar y6 = vertices[19];
653 const PetscScalar z6 = vertices[20];
654 const PetscScalar x7 = vertices[21];
655 const PetscScalar y7 = vertices[22];
656 const PetscScalar z7 = vertices[23];
657 const PetscScalar f_1 = x1 - x0;
658 const PetscScalar g_1 = y1 - y0;
659 const PetscScalar h_1 = z1 - z0;
660 const PetscScalar f_3 = x3 - x0;
661 const PetscScalar g_3 = y3 - y0;
662 const PetscScalar h_3 = z3 - z0;
663 const PetscScalar f_4 = x4 - x0;
664 const PetscScalar g_4 = y4 - y0;
665 const PetscScalar h_4 = z4 - z0;
666 const PetscScalar f_01 = x2 - x1 - x3 + x0;
667 const PetscScalar g_01 = y2 - y1 - y3 + y0;
668 const PetscScalar h_01 = z2 - z1 - z3 + z0;
669 const PetscScalar f_12 = x7 - x3 - x4 + x0;
670 const PetscScalar g_12 = y7 - y3 - y4 + y0;
671 const PetscScalar h_12 = z7 - z3 - z4 + z0;
672 const PetscScalar f_02 = x5 - x1 - x4 + x0;
673 const PetscScalar g_02 = y5 - y1 - y4 + y0;
674 const PetscScalar h_02 = z5 - z1 - z4 + z0;
675 const PetscScalar f_012 = x6 - x0 + x1 - x2 + x3 + x4 - x5 - x7;
676 const PetscScalar g_012 = y6 - y0 + y1 - y2 + y3 + y4 - y5 - y7;
677 const PetscScalar h_012 = z6 - z0 + z1 - z2 + z3 + z4 - z5 - z7;
678 const PetscScalar *ref;
679 PetscScalar *real;
680 PetscErrorCode ierr;
681
682 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 682; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
683 ierr = VecGetArrayRead(Xref, &ref);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),683,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
684 ierr = VecGetArray(Xreal, &real);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),684,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
685 {
686 const PetscScalar p0 = ref[0];
687 const PetscScalar p1 = ref[1];
688 const PetscScalar p2 = ref[2];
689
690 real[0] = x0 + f_1*p0 + f_3*p1 + f_4*p2 + f_01*p0*p1 + f_12*p1*p2 + f_02*p0*p2 + f_012*p0*p1*p2;
691 real[1] = y0 + g_1*p0 + g_3*p1 + g_4*p2 + g_01*p0*p1 + g_01*p0*p1 + g_12*p1*p2 + g_02*p0*p2 + g_012*p0*p1*p2;
692 real[2] = z0 + h_1*p0 + h_3*p1 + h_4*p2 + h_01*p0*p1 + h_01*p0*p1 + h_12*p1*p2 + h_02*p0*p2 + h_012*p0*p1*p2;
693 }
694 ierr = PetscLogFlops(114);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),694,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
695 ierr = VecRestoreArrayRead(Xref, &ref);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),695,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
696 ierr = VecRestoreArray(Xreal, &real);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),696,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
697 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
698}
699
700PETSC_STATIC_INLINEstatic inline PetscErrorCode HexJacobian_Private(SNES snes, Vec Xref, Mat J, Mat M, void *ctx)
701{
702 const PetscScalar *vertices = (const PetscScalar*) ctx;
703 const PetscScalar x0 = vertices[0];
704 const PetscScalar y0 = vertices[1];
705 const PetscScalar z0 = vertices[2];
706 const PetscScalar x1 = vertices[9];
707 const PetscScalar y1 = vertices[10];
708 const PetscScalar z1 = vertices[11];
709 const PetscScalar x2 = vertices[6];
710 const PetscScalar y2 = vertices[7];
711 const PetscScalar z2 = vertices[8];
712 const PetscScalar x3 = vertices[3];
713 const PetscScalar y3 = vertices[4];
714 const PetscScalar z3 = vertices[5];
715 const PetscScalar x4 = vertices[12];
716 const PetscScalar y4 = vertices[13];
717 const PetscScalar z4 = vertices[14];
718 const PetscScalar x5 = vertices[15];
719 const PetscScalar y5 = vertices[16];
720 const PetscScalar z5 = vertices[17];
721 const PetscScalar x6 = vertices[18];
722 const PetscScalar y6 = vertices[19];
723 const PetscScalar z6 = vertices[20];
724 const PetscScalar x7 = vertices[21];
725 const PetscScalar y7 = vertices[22];
726 const PetscScalar z7 = vertices[23];
727 const PetscScalar f_xy = x2 - x1 - x3 + x0;
728 const PetscScalar g_xy = y2 - y1 - y3 + y0;
729 const PetscScalar h_xy = z2 - z1 - z3 + z0;
730 const PetscScalar f_yz = x7 - x3 - x4 + x0;
731 const PetscScalar g_yz = y7 - y3 - y4 + y0;
732 const PetscScalar h_yz = z7 - z3 - z4 + z0;
733 const PetscScalar f_xz = x5 - x1 - x4 + x0;
734 const PetscScalar g_xz = y5 - y1 - y4 + y0;
735 const PetscScalar h_xz = z5 - z1 - z4 + z0;
736 const PetscScalar f_xyz = x6 - x0 + x1 - x2 + x3 + x4 - x5 - x7;
737 const PetscScalar g_xyz = y6 - y0 + y1 - y2 + y3 + y4 - y5 - y7;
738 const PetscScalar h_xyz = z6 - z0 + z1 - z2 + z3 + z4 - z5 - z7;
739 const PetscScalar *ref;
740 PetscErrorCode ierr;
741
742 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 742; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
743 ierr = VecGetArrayRead(Xref, &ref);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),743,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
744 {
745 const PetscScalar x = ref[0];
746 const PetscScalar y = ref[1];
747 const PetscScalar z = ref[2];
748 const PetscInt rows[3] = {0, 1, 2};
749 PetscScalar values[9];
750
751 values[0] = (x1 - x0 + f_xy*y + f_xz*z + f_xyz*y*z) / 2.0;
752 values[1] = (x3 - x0 + f_xy*x + f_yz*z + f_xyz*x*z) / 2.0;
753 values[2] = (x4 - x0 + f_yz*y + f_xz*x + f_xyz*x*y) / 2.0;
754 values[3] = (y1 - y0 + g_xy*y + g_xz*z + g_xyz*y*z) / 2.0;
755 values[4] = (y3 - y0 + g_xy*x + g_yz*z + g_xyz*x*z) / 2.0;
756 values[5] = (y4 - y0 + g_yz*y + g_xz*x + g_xyz*x*y) / 2.0;
757 values[6] = (z1 - z0 + h_xy*y + h_xz*z + h_xyz*y*z) / 2.0;
758 values[7] = (z3 - z0 + h_xy*x + h_yz*z + h_xyz*x*z) / 2.0;
759 values[8] = (z4 - z0 + h_yz*y + h_xz*x + h_xyz*x*y) / 2.0;
760
761 ierr = MatSetValues(J, 3, rows, 3, rows, values, INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),761,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
762 }
763 ierr = PetscLogFlops(152);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),763,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
764 ierr = VecRestoreArrayRead(Xref, &ref);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),764,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
765 ierr = MatAssemblyBegin(J, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),765,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
766 ierr = MatAssemblyEnd(J, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),766,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
767 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
768}
769
770PETSC_STATIC_INLINEstatic inline PetscErrorCode DMInterpolate_Hex_Private(DMInterpolationInfo ctx, DM dm, Vec xLocal, Vec v)
771{
772 DM dmCoord;
773 SNES snes;
774 KSP ksp;
775 PC pc;
776 Vec coordsLocal, r, ref, real;
777 Mat J;
778 const PetscScalar *coords;
779 PetscScalar *a;
780 PetscInt p;
781 PetscErrorCode ierr;
782
783 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 783; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
784 ierr = DMGetCoordinatesLocal(dm, &coordsLocal);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),784,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
785 ierr = DMGetCoordinateDM(dm, &dmCoord);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),785,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
786 ierr = SNESCreate(PETSC_COMM_SELF((MPI_Comm)0x44000001), &snes);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),786,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
787 ierr = SNESSetOptionsPrefix(snes, "hex_interp_");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),787,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
788 ierr = VecCreate(PETSC_COMM_SELF((MPI_Comm)0x44000001), &r);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),788,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
789 ierr = VecSetSizes(r, 3, 3);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),789,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
790 ierr = VecSetType(r,dm->vectype);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),790,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
791 ierr = VecDuplicate(r, &ref);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),791,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
792 ierr = VecDuplicate(r, &real);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),792,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
793 ierr = MatCreate(PETSC_COMM_SELF((MPI_Comm)0x44000001), &J);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),793,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
794 ierr = MatSetSizes(J, 3, 3, 3, 3);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),794,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
795 ierr = MatSetType(J, MATSEQDENSE"seqdense");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),795,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
796 ierr = MatSetUp(J);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),796,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
797 ierr = SNESSetFunction(snes, r, HexMap_Private, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),797,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
798 ierr = SNESSetJacobian(snes, J, J, HexJacobian_Private, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),798,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
799 ierr = SNESGetKSP(snes, &ksp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),799,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
800 ierr = KSPGetPC(ksp, &pc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),800,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
801 ierr = PCSetType(pc, PCLU"lu");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),801,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
802 ierr = SNESSetFromOptions(snes);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),802,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
803
804 ierr = VecGetArrayRead(ctx->coords, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),804,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
805 ierr = VecGetArray(v, &a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),805,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
806 for (p = 0; p < ctx->n; ++p) {
807 PetscScalar *x = NULL((void*)0), *vertices = NULL((void*)0);
808 PetscScalar *xi;
809 PetscReal xir[3];
810 PetscInt c = ctx->cells[p], comp, coordSize, xSize;
811
812 /* Can make this do all points at once */
813 ierr = DMPlexVecGetClosure(dmCoord, NULL((void*)0), coordsLocal, c, &coordSize, &vertices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),813,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
814 if (8*3 != coordSize) SETERRQ2(ctx->comm, PETSC_ERR_ARG_SIZ, "Invalid closure size %d should be %d", coordSize, 8*3)return PetscError(ctx->comm,814,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,60,PETSC_ERROR_INITIAL,"Invalid closure size %d should be %d"
,coordSize,8*3);
815 ierr = DMPlexVecGetClosure(dm, NULL((void*)0), xLocal, c, &xSize, &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),815,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
816 if (8*ctx->dof != xSize) SETERRQ2(ctx->comm, PETSC_ERR_ARG_SIZ, "Invalid closure size %d should be %d", xSize, 8*ctx->dof)return PetscError(ctx->comm,816,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,60,PETSC_ERROR_INITIAL,"Invalid closure size %d should be %d"
,xSize,8*ctx->dof);
817 ierr = SNESSetFunction(snes, NULL((void*)0), NULL((void*)0), (void*) vertices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),817,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
818 ierr = SNESSetJacobian(snes, NULL((void*)0), NULL((void*)0), NULL((void*)0), (void*) vertices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),818,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
819 ierr = VecGetArray(real, &xi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),819,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
820 xi[0] = coords[p*ctx->dim+0];
821 xi[1] = coords[p*ctx->dim+1];
822 xi[2] = coords[p*ctx->dim+2];
823 ierr = VecRestoreArray(real, &xi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),823,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
824 ierr = SNESSolve(snes, real, ref);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),824,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
825 ierr = VecGetArray(ref, &xi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),825,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
826 xir[0] = PetscRealPart(xi[0])(xi[0]);
827 xir[1] = PetscRealPart(xi[1])(xi[1]);
828 xir[2] = PetscRealPart(xi[2])(xi[2]);
829 for (comp = 0; comp < ctx->dof; ++comp) {
830 a[p*ctx->dof+comp] =
831 x[0*ctx->dof+comp]*(1-xir[0])*(1-xir[1])*(1-xir[2]) +
832 x[3*ctx->dof+comp]* xir[0]*(1-xir[1])*(1-xir[2]) +
833 x[2*ctx->dof+comp]* xir[0]* xir[1]*(1-xir[2]) +
834 x[1*ctx->dof+comp]*(1-xir[0])* xir[1]*(1-xir[2]) +
835 x[4*ctx->dof+comp]*(1-xir[0])*(1-xir[1])* xir[2] +
836 x[5*ctx->dof+comp]* xir[0]*(1-xir[1])* xir[2] +
837 x[6*ctx->dof+comp]* xir[0]* xir[1]* xir[2] +
838 x[7*ctx->dof+comp]*(1-xir[0])* xir[1]* xir[2];
839 }
840 ierr = VecRestoreArray(ref, &xi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),840,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
841 ierr = DMPlexVecRestoreClosure(dmCoord, NULL((void*)0), coordsLocal, c, &coordSize, &vertices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),841,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
842 ierr = DMPlexVecRestoreClosure(dm, NULL((void*)0), xLocal, c, &xSize, &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),842,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
843 }
844 ierr = VecRestoreArray(v, &a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),844,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
845 ierr = VecRestoreArrayRead(ctx->coords, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),845,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
846
847 ierr = SNESDestroy(&snes);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),847,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
848 ierr = VecDestroy(&r);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),848,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
849 ierr = VecDestroy(&ref);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),849,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
850 ierr = VecDestroy(&real);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),850,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
851 ierr = MatDestroy(&J);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),851,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
852 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
853}
854
855/*@C
856 DMInterpolationEvaluate - Using the input from dm and x, calculates interpolated field values at the interpolation points.
857
858 Input Parameters:
859+ ctx - The DMInterpolationInfo context
860. dm - The DM
861- x - The local vector containing the field to be interpolated
862
863 Output Parameters:
864. v - The vector containing the interpolated values
865
866 Note: A suitable v can be obtained using DMInterpolationGetVector().
867
868 Level: beginner
869
870.seealso: DMInterpolationGetVector(), DMInterpolationAddPoints(), DMInterpolationCreate()
871@*/
872PetscErrorCode DMInterpolationEvaluate(DMInterpolationInfo ctx, DM dm, Vec x, Vec v)
873{
874 PetscInt dim, coneSize, n;
875 PetscErrorCode ierr;
876
877 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 877; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
878 PetscValidHeaderSpecific(dm, DM_CLASSID, 2)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),878,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (!PetscCheckPointer
(dm,PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),878
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),878,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),878,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",2
); } } while (0);
879 PetscValidHeaderSpecific(x, VEC_CLASSID, 3)do { if (!x) return PetscError(((MPI_Comm)0x44000001),879,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",3); if (!PetscCheckPointer
(x,PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),879
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,3); if (((PetscObject)(x))->classid != VEC_CLASSID) { if (
((PetscObject)(x))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),879,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,3); else return PetscError(((MPI_Comm)0x44000001),879,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",3
); } } while (0);
880 PetscValidHeaderSpecific(v, VEC_CLASSID, 4)do { if (!v) return PetscError(((MPI_Comm)0x44000001),880,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",4); if (!PetscCheckPointer
(v,PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),880
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,4); if (((PetscObject)(v))->classid != VEC_CLASSID) { if (
((PetscObject)(v))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),880,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,4); else return PetscError(((MPI_Comm)0x44000001),880,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",4
); } } while (0);
881 ierr = VecGetLocalSize(v, &n);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),881,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
882 if (n != ctx->n*ctx->dof) SETERRQ2(ctx->comm, PETSC_ERR_ARG_SIZ, "Invalid input vector size %d should be %d", n, ctx->n*ctx->dof)return PetscError(ctx->comm,882,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,60,PETSC_ERROR_INITIAL,"Invalid input vector size %d should be %d"
,n,ctx->n*ctx->dof);
883 if (n) {
884 ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),884,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
885 ierr = DMPlexGetConeSize(dm, ctx->cells[0], &coneSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),885,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
886 if (dim == 2) {
887 if (coneSize == 3) {
888 ierr = DMInterpolate_Triangle_Private(ctx, dm, x, v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),888,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
889 } else if (coneSize == 4) {
890 ierr = DMInterpolate_Quad_Private(ctx, dm, x, v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),890,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
891 } else SETERRQ1(ctx->comm, PETSC_ERR_ARG_OUTOFRANGE, "Unsupported dimension %d for point interpolation", dim)return PetscError(ctx->comm,891,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,63,PETSC_ERROR_INITIAL,"Unsupported dimension %d for point interpolation"
,dim);
892 } else if (dim == 3) {
893 if (coneSize == 4) {
894 ierr = DMInterpolate_Tetrahedron_Private(ctx, dm, x, v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),894,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
895 } else {
896 ierr = DMInterpolate_Hex_Private(ctx, dm, x, v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),896,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
897 }
898 } else SETERRQ1(ctx->comm, PETSC_ERR_ARG_OUTOFRANGE, "Unsupported dimension %d for point interpolation", dim)return PetscError(ctx->comm,898,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,63,PETSC_ERROR_INITIAL,"Unsupported dimension %d for point interpolation"
,dim);
899 }
900 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
901}
902
903/*@C
904 DMInterpolationDestroy - Destroys a DMInterpolationInfo context
905
906 Collective on ctx
907
908 Input Parameter:
909. ctx - the context
910
911 Level: beginner
912
913.seealso: DMInterpolationEvaluate(), DMInterpolationAddPoints(), DMInterpolationCreate()
914@*/
915PetscErrorCode DMInterpolationDestroy(DMInterpolationInfo *ctx)
916{
917 PetscErrorCode ierr;
918
919 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 919; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
920 PetscValidPointer(ctx, 2)do { if (!ctx) return PetscError(((MPI_Comm)0x44000001),920,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",2); if (!
PetscCheckPointer(ctx,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),920,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",2);
} while (0);
921 ierr = VecDestroy(&(*ctx)->coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),921,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
922 ierr = PetscFree((*ctx)->points)((*PetscTrFree)((void*)((*ctx)->points),922,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
) || (((*ctx)->points) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),922,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
923 ierr = PetscFree((*ctx)->cells)((*PetscTrFree)((void*)((*ctx)->cells),923,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
) || (((*ctx)->cells) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),923,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
924 ierr = PetscFree(*ctx)((*PetscTrFree)((void*)(*ctx),924,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
) || ((*ctx) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),924,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
925 *ctx = NULL((void*)0);
926 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
927}
928
929/*@C
930 SNESMonitorFields - Monitors the residual for each field separately
931
932 Collective on SNES
933
934 Input Parameters:
935+ snes - the SNES context
936. its - iteration number
937. fgnorm - 2-norm of residual
938- vf - PetscViewerAndFormat of type ASCII
939
940 Notes:
941 This routine prints the residual norm at each iteration.
942
943 Level: intermediate
944
945.seealso: SNESMonitorSet(), SNESMonitorDefault()
946@*/
947PetscErrorCode SNESMonitorFields(SNES snes, PetscInt its, PetscReal fgnorm, PetscViewerAndFormat *vf)
948{
949 PetscViewer viewer = vf->viewer;
950 Vec res;
951 DM dm;
952 PetscSection s;
953 const PetscScalar *r;
954 PetscReal *lnorms, *norms;
955 PetscInt numFields, f, pStart, pEnd, p;
956 PetscErrorCode ierr;
957
958 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 958; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
959 PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,4)do { if (!viewer) return PetscError(((MPI_Comm)0x44000001),959
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",4); if (
!PetscCheckPointer(viewer,PETSC_OBJECT)) return PetscError(((
MPI_Comm)0x44000001),959,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,4); if (((PetscObject)(viewer))->classid != PETSC_VIEWER_CLASSID
) { if (((PetscObject)(viewer))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),959,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,4); else return PetscError(((MPI_Comm)0x44000001),959,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",4
); } } while (0);
960 ierr = SNESGetFunction(snes, &res, 0, 0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),960,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
961 ierr = SNESGetDM(snes, &dm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),961,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
962 ierr = DMGetSection(dm, &s);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),962,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
963 ierr = PetscSectionGetNumFields(s, &numFields);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),963,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
964 ierr = PetscSectionGetChart(s, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),964,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
965 ierr = PetscCalloc2(numFields, &lnorms, numFields, &norms)PetscMallocA(2,PETSC_TRUE,965,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(numFields)*sizeof(**(&lnorms)),(&lnorms),(size_t
)(numFields)*sizeof(**(&norms)),(&norms));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),965,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
966 ierr = VecGetArrayRead(res, &r);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),966,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
967 for (p = pStart; p < pEnd; ++p) {
968 for (f = 0; f < numFields; ++f) {
969 PetscInt fdof, foff, d;
970
971 ierr = PetscSectionGetFieldDof(s, p, f, &fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),971,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
972 ierr = PetscSectionGetFieldOffset(s, p, f, &foff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),972,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
973 for (d = 0; d < fdof; ++d) lnorms[f] += PetscRealPart(PetscSqr(r[foff+d]))(((r[foff+d])*(r[foff+d])));
974 }
975 }
976 ierr = VecRestoreArrayRead(res, &r);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),976,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
977 ierr = MPIU_Allreduce(lnorms, norms, numFields, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject) dm))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject) dm)
,numFields,977,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm
((PetscObject) dm))),0) || MPI_Allreduce((lnorms),(norms),(numFields
),(((MPI_Datatype)0x4c00080b)),((MPI_Op)(0x58000003)),(PetscObjectComm
((PetscObject) dm)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),977,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
978 ierr = PetscViewerPushFormat(viewer,vf->format);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),978,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
979 ierr = PetscViewerASCIIAddTab(viewer, ((PetscObject) snes)->tablevel);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),979,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
980 ierr = PetscViewerASCIIPrintf(viewer, "%3D SNES Function norm %14.12e [", its, (double) fgnorm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),980,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
981 for (f = 0; f < numFields; ++f) {
982 if (f > 0) {ierr = PetscViewerASCIIPrintf(viewer, ", ");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),982,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
983 ierr = PetscViewerASCIIPrintf(viewer, "%14.12e", (double) PetscSqrtReal(norms[f])sqrt(norms[f]));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),983,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
984 }
985 ierr = PetscViewerASCIIPrintf(viewer, "]\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),985,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
986 ierr = PetscViewerASCIISubtractTab(viewer, ((PetscObject) snes)->tablevel);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),986,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
987 ierr = PetscViewerPopFormat(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),987,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
988 ierr = PetscFree2(lnorms, norms)PetscFreeA(2,988,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,&(lnorms),&(norms));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),988,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
989 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
990}
991
992/********************* Residual Computation **************************/
993
994
995/*@
996 DMPlexSNESGetGeometryFVM - Return precomputed geometric data
997
998 Input Parameter:
999. dm - The DM
1000
1001 Output Parameters:
1002+ facegeom - The values precomputed from face geometry
1003. cellgeom - The values precomputed from cell geometry
1004- minRadius - The minimum radius over the mesh of an inscribed sphere in a cell
1005
1006 Level: developer
1007
1008.seealso: DMPlexTSSetRHSFunctionLocal()
1009@*/
1010PetscErrorCode DMPlexSNESGetGeometryFVM(DM dm, Vec *facegeom, Vec *cellgeom, PetscReal *minRadius)
1011{
1012 DM plex;
1013 PetscErrorCode ierr;
1014
1015 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 1015; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1016 PetscValidHeaderSpecific(dm,DM_CLASSID,1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1016,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",1); if (!PetscCheckPointer
(dm,PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1016
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1016,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1016,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",1
); } } while (0);
1017 ierr = DMSNESConvertPlex(dm,&plex,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1017,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1018 ierr = DMPlexGetDataFVM(plex, NULL((void*)0), cellgeom, facegeom, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1018,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1019 if (minRadius) {ierr = DMPlexGetMinRadius(plex, minRadius);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1019,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1020 ierr = DMDestroy(&plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1020,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1021 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1022}
1023
1024/*@
1025 DMPlexSNESGetGradientDM - Return gradient data layout
1026
1027 Input Parameters:
1028+ dm - The DM
1029- fv - The PetscFV
1030
1031 Output Parameter:
1032. dmGrad - The layout for gradient values
1033
1034 Level: developer
1035
1036.seealso: DMPlexSNESGetGeometryFVM()
1037@*/
1038PetscErrorCode DMPlexSNESGetGradientDM(DM dm, PetscFV fv, DM *dmGrad)
1039{
1040 DM plex;
1041 PetscBool computeGradients;
1042 PetscErrorCode ierr;
1043
1044 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 1044; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1045 PetscValidHeaderSpecific(dm,DM_CLASSID,1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1045,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",1); if (!PetscCheckPointer
(dm,PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1045
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1045,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1045,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",1
); } } while (0);
1046 PetscValidHeaderSpecific(fv,PETSCFV_CLASSID,2)do { if (!fv) return PetscError(((MPI_Comm)0x44000001),1046,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (!PetscCheckPointer
(fv,PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1046
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(fv))->classid != PETSCFV_CLASSID) {
if (((PetscObject)(fv))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),1046,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),1046,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",2
); } } while (0);
1047 PetscValidPointer(dmGrad,3)do { if (!dmGrad) return PetscError(((MPI_Comm)0x44000001),1047
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(dmGrad,PETSC_CHAR)) return PetscError(((
MPI_Comm)0x44000001),1047,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",3);
} while (0);
1048 ierr = PetscFVGetComputeGradients(fv, &computeGradients);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1048,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1049 if (!computeGradients) {*dmGrad = NULL((void*)0); PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);}
1050 ierr = DMSNESConvertPlex(dm,&plex,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1050,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1051 ierr = DMPlexGetDataFVM(plex, fv, NULL((void*)0), NULL((void*)0), dmGrad);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1051,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1052 ierr = DMDestroy(&plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1052,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1053 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1054}
1055
1056static PetscErrorCode DMPlexComputeBdResidual_Single_Internal(DM dm, PetscReal t, DMLabel label, PetscInt numValues, const PetscInt values[], PetscInt field, Vec locX, Vec locX_t, Vec locF, DMField coordField, IS facetIS)
1057{
1058 DM_Plex *mesh = (DM_Plex *) dm->data;
1059 DM plex = NULL((void*)0), plexA = NULL((void*)0);
1060 PetscDS prob, probAux = NULL((void*)0);
1061 PetscSection section, sectionAux = NULL((void*)0);
1062 Vec locA = NULL((void*)0);
1063 PetscScalar *u = NULL((void*)0), *u_t = NULL((void*)0), *a = NULL((void*)0), *elemVec = NULL((void*)0);
1064 PetscInt v;
1065 PetscInt totDim, totDimAux = 0;
1066 PetscErrorCode ierr;
1067
1068 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 1068; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1069 ierr = DMConvert(dm, DMPLEX"plex", &plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1069,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1070 ierr = DMGetSection(dm, &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1070,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1071 ierr = DMGetDS(dm, &prob);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1071,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1072 ierr = PetscDSGetTotalDimension(prob, &totDim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1072,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1073 ierr = PetscObjectQuery((PetscObject) dm, "A", (PetscObject *) &locA);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1073,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1074 if (locA) {
1075 DM dmAux;
1076
1077 ierr = VecGetDM(locA, &dmAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1077,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1078 ierr = DMConvert(dmAux, DMPLEX"plex", &plexA);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1078,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1079 ierr = DMGetDS(plexA, &probAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1079,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1080 ierr = PetscDSGetTotalDimension(probAux, &totDimAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1080,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1081 ierr = DMGetSection(plexA, &sectionAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1081,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1082 }
1083 for (v = 0; v < numValues; ++v) {
1084 PetscFEGeom *fgeom;
1085 PetscInt maxDegree;
1086 PetscQuadrature qGeom = NULL((void*)0);
1087 IS pointIS;
1088 const PetscInt *points;
1089 PetscInt numFaces, face, Nq;
1090
1091 ierr = DMLabelGetStratumIS(label, values[v], &pointIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1091,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1092 if (!pointIS) continue; /* No points with that id on this process */
1093 {
1094 IS isectIS;
1095
1096 /* TODO: Special cases of ISIntersect where it is quick to check a priori if one is a superset of the other */
1097 ierr = ISIntersect_Caching_Internal(facetIS,pointIS,&isectIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1097,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1098 ierr = ISDestroy(&pointIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1098,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1099 pointIS = isectIS;
1100 }
1101 ierr = ISGetLocalSize(pointIS,&numFaces);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1101,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1102 ierr = ISGetIndices(pointIS,&points);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1102,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1103 ierr = PetscMalloc4(numFaces*totDim, &u, locX_t ? numFaces*totDim : 0, &u_t, numFaces*totDim, &elemVec, locA ? numFaces*totDimAux : 0, &a)PetscMallocA(4,PETSC_FALSE,1103,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(numFaces*totDim)*sizeof(**(&u)),(&u),(size_t
)(locX_t ? numFaces*totDim : 0)*sizeof(**(&u_t)),(&u_t
),(size_t)(numFaces*totDim)*sizeof(**(&elemVec)),(&elemVec
),(size_t)(locA ? numFaces*totDimAux : 0)*sizeof(**(&a)),
(&a));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1103,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1104 ierr = DMFieldGetDegree(coordField,pointIS,NULL((void*)0),&maxDegree);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1104,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1105 if (maxDegree <= 1) {
1106 ierr = DMFieldCreateDefaultQuadrature(coordField,pointIS,&qGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1106,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1107 }
1108 if (!qGeom) {
1109 PetscFE fe;
1110
1111 ierr = PetscDSGetDiscretization(prob, field, (PetscObject *) &fe);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1111,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1112 ierr = PetscFEGetFaceQuadrature(fe, &qGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1112,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1113 ierr = PetscObjectReference((PetscObject)qGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1113,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1114 }
1115 ierr = PetscQuadratureGetData(qGeom, NULL((void*)0), NULL((void*)0), &Nq, NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1115,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1116 ierr = DMSNESGetFEGeom(coordField,pointIS,qGeom,PETSC_TRUE,&fgeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1116,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1117 for (face = 0; face < numFaces; ++face) {
1118 const PetscInt point = points[face], *support, *cone;
1119 PetscScalar *x = NULL((void*)0);
1120 PetscInt i, coneSize, faceLoc;
1121
1122 ierr = DMPlexGetSupport(dm, point, &support);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1122,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1123 ierr = DMPlexGetConeSize(dm, support[0], &coneSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1123,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1124 ierr = DMPlexGetCone(dm, support[0], &cone);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1124,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1125 for (faceLoc = 0; faceLoc < coneSize; ++faceLoc) if (cone[faceLoc] == point) break;
1126 if (faceLoc == coneSize) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_PLIB, "Could not find face %D in cone of support[0] %D", point, support[0])return PetscError(((MPI_Comm)0x44000001),1126,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,77,PETSC_ERROR_INITIAL,"Could not find face %D in cone of support[0] %D"
,point,support[0]);
1127 fgeom->face[face][0] = faceLoc;
1128 ierr = DMPlexVecGetClosure(plex, section, locX, support[0], NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1128,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1129 for (i = 0; i < totDim; ++i) u[face*totDim+i] = x[i];
1130 ierr = DMPlexVecRestoreClosure(plex, section, locX, support[0], NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1130,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1131 if (locX_t) {
1132 ierr = DMPlexVecGetClosure(plex, section, locX_t, support[0], NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1132,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1133 for (i = 0; i < totDim; ++i) u_t[face*totDim+i] = x[i];
1134 ierr = DMPlexVecRestoreClosure(plex, section, locX_t, support[0], NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1134,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1135 }
1136 if (locA) {
1137 PetscInt subp;
1138
1139 ierr = DMPlexGetAuxiliaryPoint(plex, plexA, support[0], &subp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1139,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1140 ierr = DMPlexVecGetClosure(plexA, sectionAux, locA, subp, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1140,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1141 for (i = 0; i < totDimAux; ++i) a[face*totDimAux+i] = x[i];
1142 ierr = DMPlexVecRestoreClosure(plexA, sectionAux, locA, subp, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1142,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1143 }
1144 }
1145 ierr = PetscArrayzero(elemVec, numFaces*totDim)PetscMemzero(elemVec,(numFaces*totDim)*sizeof(*(elemVec)));;CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1145,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1146 {
1147 PetscFE fe;
1148 PetscInt Nb;
1149 PetscFEGeom *chunkGeom = NULL((void*)0);
1150 /* Conforming batches */
1151 PetscInt numChunks, numBatches, numBlocks, Ne, blockSize, batchSize;
1152 /* Remainder */
1153 PetscInt Nr, offset;
1154
1155 ierr = PetscDSGetDiscretization(prob, field, (PetscObject *) &fe);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1155,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1156 ierr = PetscFEGetDimension(fe, &Nb);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1156,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1157 ierr = PetscFEGetTileSizes(fe, NULL((void*)0), &numBlocks, NULL((void*)0), &numBatches);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1157,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1158 /* TODO: documentation is unclear about what is going on with these numbers: how should Nb / Nq factor in ? */
1159 blockSize = Nb;
1160 batchSize = numBlocks * blockSize;
1161 ierr = PetscFESetTileSizes(fe, blockSize, numBlocks, batchSize, numBatches);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1161,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1162 numChunks = numFaces / (numBatches*batchSize);
1163 Ne = numChunks*numBatches*batchSize;
1164 Nr = numFaces % (numBatches*batchSize);
1165 offset = numFaces - Nr;
1166 ierr = PetscFEGeomGetChunk(fgeom,0,offset,&chunkGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1166,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1167 ierr = PetscFEIntegrateBdResidual(prob, field, Ne, chunkGeom, u, u_t, probAux, a, t, elemVec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1167,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1168 ierr = PetscFEGeomRestoreChunk(fgeom, 0, offset, &chunkGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1168,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1169 ierr = PetscFEGeomGetChunk(fgeom,offset,numFaces,&chunkGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1169,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1170 ierr = PetscFEIntegrateBdResidual(prob, field, Nr, chunkGeom, &u[offset*totDim], u_t ? &u_t[offset*totDim] : NULL((void*)0), probAux, a ? &a[offset*totDimAux] : NULL((void*)0), t, &elemVec[offset*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1170,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1171 ierr = PetscFEGeomRestoreChunk(fgeom,offset,numFaces,&chunkGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1171,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1172 }
1173 for (face = 0; face < numFaces; ++face) {
1174 const PetscInt point = points[face], *support;
1175
1176 if (mesh->printFEM > 1) {ierr = DMPrintCellVector(point, "BdResidual", totDim, &elemVec[face*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1176,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1177 ierr = DMPlexGetSupport(plex, point, &support);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1177,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1178 ierr = DMPlexVecSetClosure(plex, NULL((void*)0), locF, support[0], &elemVec[face*totDim], ADD_ALL_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1178,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1179 }
1180 ierr = DMSNESRestoreFEGeom(coordField,pointIS,qGeom,PETSC_TRUE,&fgeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1180,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1181 ierr = PetscQuadratureDestroy(&qGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1181,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1182 ierr = ISRestoreIndices(pointIS, &points);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1182,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1183 ierr = ISDestroy(&pointIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1183,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1184 ierr = PetscFree4(u, u_t, elemVec, a)PetscFreeA(4,1184,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,&(u),&(u_t),&(elemVec),&(a));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1184,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1185 }
1186 if (plex) {ierr = DMDestroy(&plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1186,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1187 if (plexA) {ierr = DMDestroy(&plexA);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1187,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1188 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1189}
1190
1191PetscErrorCode DMPlexComputeBdResidualSingle(DM dm, PetscReal t, DMLabel label, PetscInt numValues, const PetscInt values[], PetscInt field, Vec locX, Vec locX_t, Vec locF)
1192{
1193 DMField coordField;
1194 DMLabel depthLabel;
1195 IS facetIS;
1196 PetscInt dim;
1197 PetscErrorCode ierr;
1198
1199 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 1199; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1200 ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1200,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1201 ierr = DMPlexGetDepthLabel(dm, &depthLabel);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1201,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1202 ierr = DMLabelGetStratumIS(depthLabel, dim-1, &facetIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1202,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1203 ierr = DMGetCoordinateField(dm, &coordField);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1203,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1204 ierr = DMPlexComputeBdResidual_Single_Internal(dm, t, label, numValues, values, field, locX, locX_t, locF, coordField, facetIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1204,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1205 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1206}
1207
1208PetscErrorCode DMPlexComputeBdResidual_Internal(DM dm, Vec locX, Vec locX_t, PetscReal t, Vec locF, void *user)
1209{
1210 PetscDS prob;
1211 PetscInt numBd, bd;
1212 DMField coordField = NULL((void*)0);
1213 IS facetIS = NULL((void*)0);
1214 DMLabel depthLabel;
1215 PetscInt dim;
1216 PetscErrorCode ierr;
1217
1218 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 1218; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1219 ierr = DMGetDS(dm, &prob);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1219,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1220 ierr = DMPlexGetDepthLabel(dm, &depthLabel);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1220,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1221 ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1221,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1222 ierr = DMLabelGetStratumIS(depthLabel,dim - 1,&facetIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1222,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1223 ierr = PetscDSGetNumBoundary(prob, &numBd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1223,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1224 for (bd = 0; bd < numBd; ++bd) {
1225 DMBoundaryConditionType type;
1226 const char *bdLabel;
1227 DMLabel label;
1228 const PetscInt *values;
1229 PetscInt field, numValues;
1230 PetscObject obj;
1231 PetscClassId id;
1232
1233 ierr = PetscDSGetBoundary(prob, bd, &type, NULL((void*)0), &bdLabel, &field, NULL((void*)0), NULL((void*)0), NULL((void*)0), &numValues, &values, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1233,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1234 ierr = PetscDSGetDiscretization(prob, field, &obj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1234,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1235 ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1235,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1236 if ((id != PETSCFE_CLASSID) || (type & DM_BC_ESSENTIAL)) continue;
1237 if (!facetIS) {
1238 DMLabel depthLabel;
1239 PetscInt dim;
1240
1241 ierr = DMPlexGetDepthLabel(dm, &depthLabel);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1241,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1242 ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1242,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1243 ierr = DMLabelGetStratumIS(depthLabel, dim - 1, &facetIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1243,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1244 }
1245 ierr = DMGetCoordinateField(dm, &coordField);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1245,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1246 ierr = DMGetLabel(dm, bdLabel, &label);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1246,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1247 ierr = DMPlexComputeBdResidual_Single_Internal(dm, t, label, numValues, values, field, locX, locX_t, locF, coordField, facetIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1247,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1248 }
1249 ierr = ISDestroy(&facetIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1249,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1250 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1251}
1252
1253PetscErrorCode DMPlexComputeResidual_Internal(DM dm, IS cellIS, PetscReal time, Vec locX, Vec locX_t, PetscReal t, Vec locF, void *user)
1254{
1255 DM_Plex *mesh = (DM_Plex *) dm->data;
1256 const char *name = "Residual";
1257 DM dmAux = NULL((void*)0);
1258 DM dmGrad = NULL((void*)0);
1259 DMLabel ghostLabel = NULL((void*)0);
1260 PetscDS prob = NULL((void*)0);
1261 PetscDS probAux = NULL((void*)0);
1262 PetscSection section = NULL((void*)0);
1263 PetscBool useFEM = PETSC_FALSE;
1264 PetscBool useFVM = PETSC_FALSE;
1265 PetscBool isImplicit = (locX_t || time == PETSC_MIN_REAL(-1.7976931348623157e+308)) ? PETSC_TRUE : PETSC_FALSE;
1
Assuming 'locX_t' is null
→
2
←
'?' condition is false
→
1266 PetscFV fvm = NULL((void*)0);
1267 PetscFVCellGeom *cgeomFVM = NULL((void*)0);
1268 PetscFVFaceGeom *fgeomFVM = NULL((void*)0);
1269 DMField coordField = NULL((void*)0);
1270 Vec locA, cellGeometryFVM = NULL((void*)0), faceGeometryFVM = NULL((void*)0), grad, locGrad = NULL((void*)0);
1271 PetscScalar *u = NULL((void*)0), *u_t, *a, *uL, *uR;
1272 IS chunkIS;
1273 const PetscInt *cells;
1274 PetscInt cStart, cEnd, numCells;
1275 PetscInt Nf, f, totDim, totDimAux, numChunks, cellChunkSize, faceChunkSize, chunk, fStart, fEnd;
1276 PetscInt maxDegree = PETSC_MAX_INT2147483647;
1277 PetscQuadrature affineQuad = NULL((void*)0), *quads = NULL((void*)0);
1278 PetscFEGeom *affineGeom = NULL((void*)0), **geoms = NULL((void*)0);
3
←
'geoms' initialized to a null pointer value
→
1279 PetscErrorCode ierr;
1280
1281 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 1281; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1282 ierr = PetscLogEventBegin(DMPLEX_ResidualFEM,dm,0,0,0)(((PetscLogPLB && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[DMPLEX_ResidualFEM].active) ? (*PetscLogPLB)((DMPLEX_ResidualFEM
),0,(PetscObject)(dm),(PetscObject)(0),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1282,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1283 /* TODO The places where we have to use isFE are probably the member functions for the PetscDisc class */
1284 /* TODO The FVM geometry is over-manipulated. Make the precalc functions return exactly what we need */
1285 /* FEM+FVM */
1286 ierr = ISGetPointRange(cellIS, &cStart, &cEnd, &cells);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1286,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1287 ierr = DMPlexGetHeightStratum(dm, 1, &fStart, &fEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1287,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1288 /* 1: Get sizes from dm and dmAux */
1289 ierr = DMGetSection(dm, &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1289,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1290 ierr = DMGetLabel(dm, "ghost", &ghostLabel);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1290,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1291 ierr = DMGetCellDS(dm, cStart, &prob);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1291,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1292 ierr = PetscDSGetNumFields(prob, &Nf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1292,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1293 ierr = PetscDSGetTotalDimension(prob, &totDim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1293,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1294 ierr = PetscObjectQuery((PetscObject) dm, "A", (PetscObject *) &locA);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1294,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1295 if (locA) {
4
←
Assuming 'locA' is null
→
5
←
Taking false branch
→
1296 PetscInt subcell;
1297 ierr = DMPlexGetAuxiliaryPoint(dm, dmAux, cStart, &subcell);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1297,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1298 ierr = VecGetDM(locA, &dmAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1298,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1299 ierr = DMGetCellDS(dmAux, subcell, &probAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1299,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1300 ierr = PetscDSGetTotalDimension(probAux, &totDimAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1300,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1301 }
1302 /* 2: Get geometric data */
1303 for (f = 0; f < Nf; ++f) {
6
←
Assuming 'f' is < 'Nf'
→
7
←
Loop condition is true. Entering loop body
→
12
←
Assuming 'f' is >= 'Nf'
→
13
←
Loop condition is false. Execution continues on line 1315
→
1304 PetscObject obj;
1305 PetscClassId id;
1306 PetscBool fimp;
1307
1308 ierr = PetscDSGetImplicit(prob, f, &fimp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1308,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1309 if (isImplicit != fimp) continue;
8
←
Assuming 'isImplicit' is equal to 'fimp'
→
9
←
Taking false branch
→
1310 ierr = PetscDSGetDiscretization(prob, f, &obj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1310,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1311 ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1311,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1312 if (id == PETSCFE_CLASSID) {useFEM = PETSC_TRUE;}
10
←
Taking false branch
→
1313 if (id == PETSCFV_CLASSID) {useFVM = PETSC_TRUE; fvm = (PetscFV) obj;}
11
←
Taking false branch
→
1314 }
1315 if (useFEM) {
14
←
Taking false branch
→
1316 ierr = DMGetCoordinateField(dm, &coordField);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1316,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1317 ierr = DMFieldGetDegree(coordField,cellIS,NULL((void*)0),&maxDegree);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1317,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1318 if (maxDegree <= 1) {
1319 ierr = DMFieldCreateDefaultQuadrature(coordField,cellIS,&affineQuad);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1319,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1320 if (affineQuad) {
1321 ierr = DMSNESGetFEGeom(coordField,cellIS,affineQuad,PETSC_FALSE,&affineGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1321,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1322 }
1323 } else {
1324 ierr = PetscCalloc2(Nf,&quads,Nf,&geoms)PetscMallocA(2,PETSC_TRUE,1324,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(Nf)*sizeof(**(&quads)),(&quads),(size_t)(Nf
)*sizeof(**(&geoms)),(&geoms));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1324,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1325 for (f = 0; f < Nf; ++f) {
1326 PetscObject obj;
1327 PetscClassId id;
1328 PetscBool fimp;
1329
1330 ierr = PetscDSGetImplicit(prob, f, &fimp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1330,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1331 if (isImplicit != fimp) continue;
1332 ierr = PetscDSGetDiscretization(prob, f, &obj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1332,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1333 ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1333,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1334 if (id == PETSCFE_CLASSID) {
1335 PetscFE fe = (PetscFE) obj;
1336
1337 ierr = PetscFEGetQuadrature(fe, &quads[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1337,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1338 ierr = PetscObjectReference((PetscObject)quads[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1338,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1339 ierr = DMSNESGetFEGeom(coordField,cellIS,quads[f],PETSC_FALSE,&geoms[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1339,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1340 }
1341 }
1342 }
1343 }
1344 if (useFVM) {
15
←
Taking false branch
→
1345 ierr = DMPlexSNESGetGeometryFVM(dm, &faceGeometryFVM, &cellGeometryFVM, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1345,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1346 ierr = VecGetArrayRead(faceGeometryFVM, (const PetscScalar **) &fgeomFVM);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1346,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1347 ierr = VecGetArrayRead(cellGeometryFVM, (const PetscScalar **) &cgeomFVM);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1347,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1348 /* Reconstruct and limit cell gradients */
1349 ierr = DMPlexSNESGetGradientDM(dm, fvm, &dmGrad);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1349,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1350 if (dmGrad) {
1351 ierr = DMPlexGetHeightStratum(dm, 1, &fStart, &fEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1351,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1352 ierr = DMGetGlobalVector(dmGrad, &grad);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1352,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1353 ierr = DMPlexReconstructGradients_Internal(dm, fvm, fStart, fEnd, faceGeometryFVM, cellGeometryFVM, locX, grad);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1353,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1354 /* Communicate gradient values */
1355 ierr = DMGetLocalVector(dmGrad, &locGrad);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1355,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1356 ierr = DMGlobalToLocalBegin(dmGrad, grad, INSERT_VALUES, locGrad);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1356,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1357 ierr = DMGlobalToLocalEnd(dmGrad, grad, INSERT_VALUES, locGrad);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1357,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1358 ierr = DMRestoreGlobalVector(dmGrad, &grad);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1358,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1359 }
1360 /* Handle non-essential (e.g. outflow) boundary values */
1361 ierr = DMPlexInsertBoundaryValues(dm, PETSC_FALSE, locX, time, faceGeometryFVM, cellGeometryFVM, locGrad);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1361,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1362 }
1363 /* Loop over chunks */
1364 if (useFEM) {ierr = ISCreate(PETSC_COMM_SELF((MPI_Comm)0x44000001), &chunkIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1364,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
16
←
Taking false branch
→
1365 numCells = cEnd - cStart;
1366 numChunks = 1;
1367 cellChunkSize = numCells/numChunks;
1368 faceChunkSize = (fEnd - fStart)/numChunks;
1369 numChunks = PetscMin(1,numCells)(((1)<(numCells)) ? (1) : (numCells));
1370 for (chunk = 0; chunk < numChunks; ++chunk) {
17
←
Loop condition is true. Entering loop body
→
1371 PetscScalar *elemVec, *fluxL, *fluxR;
1372 PetscReal *vol;
1373 PetscFVFaceGeom *fgeom;
1374 PetscInt cS = cStart+chunk*cellChunkSize, cE = PetscMin(cS+cellChunkSize, cEnd)(((cS+cellChunkSize)<(cEnd)) ? (cS+cellChunkSize) : (cEnd)
), numCells = cE - cS, c;
1375 PetscInt fS = fStart+chunk*faceChunkSize, fE = PetscMin(fS+faceChunkSize, fEnd)(((fS+faceChunkSize)<(fEnd)) ? (fS+faceChunkSize) : (fEnd)
), numFaces = 0, face;
1376
1377 /* Extract field coefficients */
1378 if (useFEM) {
18
←
Taking false branch
→
1379 ierr = ISGetPointSubrange(chunkIS, cS, cE, cells);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1379,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1380 ierr = DMPlexGetCellFields(dm, chunkIS, locX, locX_t, locA, &u, &u_t, &a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1380,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1381 ierr = DMGetWorkArray(dm, numCells*totDim, MPIU_SCALAR((MPI_Datatype)0x4c00080b), &elemVec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1381,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1382 ierr = PetscArrayzero(elemVec, numCells*totDim)PetscMemzero(elemVec,(numCells*totDim)*sizeof(*(elemVec)));;CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1382,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1383 }
1384 if (useFVM) {
19
←
Taking false branch
→
1385 ierr = DMPlexGetFaceFields(dm, fS, fE, locX, locX_t, faceGeometryFVM, cellGeometryFVM, locGrad, &numFaces, &uL, &uR);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1385,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1386 ierr = DMPlexGetFaceGeometry(dm, fS, fE, faceGeometryFVM, cellGeometryFVM, &numFaces, &fgeom, &vol);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1386,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1387 ierr = DMGetWorkArray(dm, numFaces*totDim, MPIU_SCALAR((MPI_Datatype)0x4c00080b), &fluxL);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1387,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1388 ierr = DMGetWorkArray(dm, numFaces*totDim, MPIU_SCALAR((MPI_Datatype)0x4c00080b), &fluxR);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1388,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1389 ierr = PetscArrayzero(fluxL, numFaces*totDim)PetscMemzero(fluxL,(numFaces*totDim)*sizeof(*(fluxL)));;CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1389,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1390 ierr = PetscArrayzero(fluxR, numFaces*totDim)PetscMemzero(fluxR,(numFaces*totDim)*sizeof(*(fluxR)));;CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1390,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1391 }
1392 /* TODO We will interlace both our field coefficients (u, u_t, uL, uR, etc.) and our output (elemVec, fL, fR). I think this works */
1393 /* Loop over fields */
1394 for (f = 0; f < Nf; ++f) {
20
←
Loop condition is true. Entering loop body
→
1395 PetscObject obj;
1396 PetscClassId id;
1397 PetscBool fimp;
1398 PetscInt numChunks, numBatches, batchSize, numBlocks, blockSize, Ne, Nr, offset;
1399
1400 ierr = PetscDSGetImplicit(prob, f, &fimp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1400,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1401 if (isImplicit != fimp) continue;
21
←
Assuming 'isImplicit' is equal to 'fimp'
→
22
←
Taking false branch
→
1402 ierr = PetscDSGetDiscretization(prob, f, &obj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1402,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1403 ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1403,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1404 if (id == PETSCFE_CLASSID) {
23
←
Taking true branch
→
1405 PetscFE fe = (PetscFE) obj;
1406 PetscFEGeom *geom = affineGeom ? affineGeom : geoms[f];
24
←
'?' condition is false
→
25
←
Array access (from variable 'geoms') results in a null pointer dereference
1407 PetscFEGeom *chunkGeom = NULL((void*)0);
1408 PetscQuadrature quad = affineQuad ? affineQuad : quads[f];
1409 PetscInt Nq, Nb;
1410
1411 ierr = PetscFEGetTileSizes(fe, NULL((void*)0), &numBlocks, NULL((void*)0), &numBatches);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1411,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1412 ierr = PetscQuadratureGetData(quad, NULL((void*)0), NULL((void*)0), &Nq, NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1412,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1413 ierr = PetscFEGetDimension(fe, &Nb);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1413,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1414 blockSize = Nb;
1415 batchSize = numBlocks * blockSize;
1416 ierr = PetscFESetTileSizes(fe, blockSize, numBlocks, batchSize, numBatches);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1416,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1417 numChunks = numCells / (numBatches*batchSize);
1418 Ne = numChunks*numBatches*batchSize;
1419 Nr = numCells % (numBatches*batchSize);
1420 offset = numCells - Nr;
1421 /* Integrate FE residual to get elemVec (need fields at quadrature points) */
1422 /* For FV, I think we use a P0 basis and the cell coefficients (for subdivided cells, we can tweak the basis tabulation to be the indicator function) */
1423 ierr = PetscFEGeomGetChunk(geom,0,offset,&chunkGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1423,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1424 ierr = PetscFEIntegrateResidual(prob, f, Ne, chunkGeom, u, u_t, probAux, a, t, elemVec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1424,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1425 ierr = PetscFEGeomGetChunk(geom,offset,numCells,&chunkGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1425,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1426 ierr = PetscFEIntegrateResidual(prob, f, Nr, chunkGeom, &u[offset*totDim], u_t ? &u_t[offset*totDim] : NULL((void*)0), probAux, &a[offset*totDimAux], t, &elemVec[offset*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1426,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1427 ierr = PetscFEGeomRestoreChunk(geom,offset,numCells,&chunkGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1427,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1428 } else if (id == PETSCFV_CLASSID) {
1429 PetscFV fv = (PetscFV) obj;
1430
1431 Ne = numFaces;
1432 /* Riemann solve over faces (need fields at face centroids) */
1433 /* We need to evaluate FE fields at those coordinates */
1434 ierr = PetscFVIntegrateRHSFunction(fv, prob, f, Ne, fgeom, vol, uL, uR, fluxL, fluxR);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1434,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1435 } else SETERRQ1(PetscObjectComm((PetscObject) dm), PETSC_ERR_ARG_WRONG, "Unknown discretization type for field %d", f)return PetscError(PetscObjectComm((PetscObject) dm),1435,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Unknown discretization type for field %d"
,f);
1436 }
1437 /* Loop over domain */
1438 if (useFEM) {
1439 /* Add elemVec to locX */
1440 for (c = cS; c < cE; ++c) {
1441 const PetscInt cell = cells ? cells[c] : c;
1442 const PetscInt cind = c - cStart;
1443
1444 if (mesh->printFEM > 1) {ierr = DMPrintCellVector(cell, name, totDim, &elemVec[cind*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1444,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1445 if (ghostLabel) {
1446 PetscInt ghostVal;
1447
1448 ierr = DMLabelGetValue(ghostLabel,cell,&ghostVal);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1448,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1449 if (ghostVal > 0) continue;
1450 }
1451 ierr = DMPlexVecSetClosure(dm, section, locF, cell, &elemVec[cind*totDim], ADD_ALL_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1451,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1452 }
1453 }
1454 if (useFVM) {
1455 PetscScalar *fa;
1456 PetscInt iface;
1457
1458 ierr = VecGetArray(locF, &fa);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1458,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1459 for (f = 0; f < Nf; ++f) {
1460 PetscFV fv;
1461 PetscObject obj;
1462 PetscClassId id;
1463 PetscInt foff, pdim;
1464
1465 ierr = PetscDSGetDiscretization(prob, f, &obj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1465,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1466 ierr = PetscDSGetFieldOffset(prob, f, &foff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1466,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1467 ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1467,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1468 if (id != PETSCFV_CLASSID) continue;
1469 fv = (PetscFV) obj;
1470 ierr = PetscFVGetNumComponents(fv, &pdim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1470,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1471 /* Accumulate fluxes to cells */
1472 for (face = fS, iface = 0; face < fE; ++face) {
1473 const PetscInt *scells;
1474 PetscScalar *fL = NULL((void*)0), *fR = NULL((void*)0);
1475 PetscInt ghost, d, nsupp, nchild;
1476
1477 ierr = DMLabelGetValue(ghostLabel, face, &ghost);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1477,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1478 ierr = DMPlexGetSupportSize(dm, face, &nsupp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1478,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1479 ierr = DMPlexGetTreeChildren(dm, face, &nchild, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1479,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1480 if (ghost >= 0 || nsupp > 2 || nchild > 0) continue;
1481 ierr = DMPlexGetSupport(dm, face, &scells);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1481,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1482 ierr = DMLabelGetValue(ghostLabel,scells[0],&ghost);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1482,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1483 if (ghost <= 0) {ierr = DMPlexPointLocalFieldRef(dm, scells[0], f, fa, &fL);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1483,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1484 ierr = DMLabelGetValue(ghostLabel,scells[1],&ghost);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1484,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1485 if (ghost <= 0) {ierr = DMPlexPointLocalFieldRef(dm, scells[1], f, fa, &fR);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1485,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1486 for (d = 0; d < pdim; ++d) {
1487 if (fL) fL[d] -= fluxL[iface*totDim+foff+d];
1488 if (fR) fR[d] += fluxR[iface*totDim+foff+d];
1489 }
1490 ++iface;
1491 }
1492 }
1493 ierr = VecRestoreArray(locF, &fa);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1493,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1494 }
1495 /* Handle time derivative */
1496 if (locX_t) {
1497 PetscScalar *x_t, *fa;
1498
1499 ierr = VecGetArray(locF, &fa);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1499,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1500 ierr = VecGetArray(locX_t, &x_t);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1500,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1501 for (f = 0; f < Nf; ++f) {
1502 PetscFV fv;
1503 PetscObject obj;
1504 PetscClassId id;
1505 PetscInt pdim, d;
1506
1507 ierr = PetscDSGetDiscretization(prob, f, &obj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1507,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1508 ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1508,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1509 if (id != PETSCFV_CLASSID) continue;
1510 fv = (PetscFV) obj;
1511 ierr = PetscFVGetNumComponents(fv, &pdim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1511,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1512 for (c = cS; c < cE; ++c) {
1513 const PetscInt cell = cells ? cells[c] : c;
1514 PetscScalar *u_t, *r;
1515
1516 if (ghostLabel) {
1517 PetscInt ghostVal;
1518
1519 ierr = DMLabelGetValue(ghostLabel, cell, &ghostVal);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1519,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1520 if (ghostVal > 0) continue;
1521 }
1522 ierr = DMPlexPointLocalFieldRead(dm, cell, f, x_t, &u_t);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1522,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1523 ierr = DMPlexPointLocalFieldRef(dm, cell, f, fa, &r);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1523,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1524 for (d = 0; d < pdim; ++d) r[d] += u_t[d];
1525 }
1526 }
1527 ierr = VecRestoreArray(locX_t, &x_t);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1527,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1528 ierr = VecRestoreArray(locF, &fa);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1528,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1529 }
1530 if (useFEM) {
1531 ierr = DMPlexRestoreCellFields(dm, chunkIS, locX, locX_t, locA, &u, &u_t, &a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1531,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1532 ierr = DMRestoreWorkArray(dm, numCells*totDim, MPIU_SCALAR((MPI_Datatype)0x4c00080b), &elemVec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1532,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1533 }
1534 if (useFVM) {
1535 ierr = DMPlexRestoreFaceFields(dm, fS, fE, locX, locX_t, faceGeometryFVM, cellGeometryFVM, locGrad, &numFaces, &uL, &uR);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1535,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1536 ierr = DMPlexRestoreFaceGeometry(dm, fS, fE, faceGeometryFVM, cellGeometryFVM, &numFaces, &fgeom, &vol);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1536,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1537 ierr = DMRestoreWorkArray(dm, numFaces*totDim, MPIU_SCALAR((MPI_Datatype)0x4c00080b), &fluxL);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1537,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1538 ierr = DMRestoreWorkArray(dm, numFaces*totDim, MPIU_SCALAR((MPI_Datatype)0x4c00080b), &fluxR);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1538,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1539 if (dmGrad) {ierr = DMRestoreLocalVector(dmGrad, &locGrad);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1539,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1540 }
1541 }
1542 if (useFEM) {ierr = ISDestroy(&chunkIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1542,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1543 ierr = ISRestorePointRange(cellIS, &cStart, &cEnd, &cells);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1543,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1544
1545 if (useFEM) {
1546 ierr = DMPlexComputeBdResidual_Internal(dm, locX, locX_t, t, locF, user);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1546,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1547
1548 if (maxDegree <= 1) {
1549 ierr = DMSNESRestoreFEGeom(coordField,cellIS,affineQuad,PETSC_FALSE,&affineGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1549,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1550 ierr = PetscQuadratureDestroy(&affineQuad);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1550,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1551 } else {
1552 for (f = 0; f < Nf; ++f) {
1553 ierr = DMSNESRestoreFEGeom(coordField,cellIS,quads[f],PETSC_FALSE,&geoms[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1553,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1554 ierr = PetscQuadratureDestroy(&quads[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1554,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1555 }
1556 ierr = PetscFree2(quads,geoms)PetscFreeA(2,1556,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,&(quads),&(geoms));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1556,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1557 }
1558 }
1559
1560 /* FEM */
1561 /* 1: Get sizes from dm and dmAux */
1562 /* 2: Get geometric data */
1563 /* 3: Handle boundary values */
1564 /* 4: Loop over domain */
1565 /* Extract coefficients */
1566 /* Loop over fields */
1567 /* Set tiling for FE*/
1568 /* Integrate FE residual to get elemVec */
1569 /* Loop over subdomain */
1570 /* Loop over quad points */
1571 /* Transform coords to real space */
1572 /* Evaluate field and aux fields at point */
1573 /* Evaluate residual at point */
1574 /* Transform residual to real space */
1575 /* Add residual to elemVec */
1576 /* Loop over domain */
1577 /* Add elemVec to locX */
1578
1579 /* FVM */
1580 /* Get geometric data */
1581 /* If using gradients */
1582 /* Compute gradient data */
1583 /* Loop over domain faces */
1584 /* Count computational faces */
1585 /* Reconstruct cell gradient */
1586 /* Loop over domain cells */
1587 /* Limit cell gradients */
1588 /* Handle boundary values */
1589 /* Loop over domain faces */
1590 /* Read out field, centroid, normal, volume for each side of face */
1591 /* Riemann solve over faces */
1592 /* Loop over domain faces */
1593 /* Accumulate fluxes to cells */
1594 /* TODO Change printFEM to printDisc here */
1595 if (mesh->printFEM) {
1596 Vec locFbc;
1597 PetscInt pStart, pEnd, p, maxDof;
1598 PetscScalar *zeroes;
1599
1600 ierr = VecDuplicate(locF,&locFbc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1600,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1601 ierr = VecCopy(locF,locFbc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1601,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1602 ierr = PetscSectionGetChart(section,&pStart,&pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1602,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1603 ierr = PetscSectionGetMaxDof(section,&maxDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1603,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1604 ierr = PetscCalloc1(maxDof,&zeroes)PetscMallocA(1,PETSC_TRUE,1604,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(maxDof)*sizeof(**(&zeroes)),(&zeroes));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1604,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1605 for (p = pStart; p < pEnd; p++) {
1606 ierr = VecSetValuesSection(locFbc,section,p,zeroes,INSERT_BC_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1606,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1607 }
1608 ierr = PetscFree(zeroes)((*PetscTrFree)((void*)(zeroes),1608,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
) || ((zeroes) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1608,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1609 ierr = DMPrintLocalVec(dm, name, mesh->printTol, locFbc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1609,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1610 ierr = VecDestroy(&locFbc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1610,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1611 }
1612 ierr = PetscLogEventEnd(DMPLEX_ResidualFEM,dm,0,0,0)(((PetscLogPLE && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[DMPLEX_ResidualFEM].active) ? (*PetscLogPLE)((DMPLEX_ResidualFEM
),0,(PetscObject)(dm),(PetscObject)(0),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1612,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1613 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1614}
1615
1616/*@
1617 DMPlexSNESComputeResidualFEM - Form the local residual F from the local input X using pointwise functions specified by the user
1618
1619 Input Parameters:
1620+ dm - The mesh
1621. X - Local solution
1622- user - The user context
1623
1624 Output Parameter:
1625. F - Local output vector
1626
1627 Level: developer
1628
1629.seealso: DMPlexComputeJacobianAction()
1630@*/
1631PetscErrorCode DMPlexSNESComputeResidualFEM(DM dm, Vec X, Vec F, void *user)
1632{
1633 DM plex;
1634 IS cellIS;
1635 PetscInt depth;
1636 PetscErrorCode ierr;
1637
1638 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 1638; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1639 ierr = DMSNESConvertPlex(dm,&plex,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1639,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1640 ierr = DMPlexGetDepth(plex, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1640,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1641 ierr = DMGetStratumIS(plex, "dim", depth, &cellIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1641,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1642 if (!cellIS) {
1643 ierr = DMGetStratumIS(plex, "depth", depth, &cellIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1643,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1644 }
1645 ierr = DMPlexComputeResidual_Internal(plex, cellIS, PETSC_MIN_REAL(-1.7976931348623157e+308), X, NULL((void*)0), 0.0, F, user);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1645,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1646 ierr = ISDestroy(&cellIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1646,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1647 ierr = DMDestroy(&plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1647,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1648 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1649}
1650
1651/*@
1652 DMPlexSNESComputeBoundaryFEM - Form the boundary values for the local input X
1653
1654 Input Parameters:
1655+ dm - The mesh
1656- user - The user context
1657
1658 Output Parameter:
1659. X - Local solution
1660
1661 Level: developer
1662
1663.seealso: DMPlexComputeJacobianAction()
1664@*/
1665PetscErrorCode DMPlexSNESComputeBoundaryFEM(DM dm, Vec X, void *user)
1666{
1667 DM plex;
1668 PetscErrorCode ierr;
1669
1670 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 1670; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1671 ierr = DMSNESConvertPlex(dm,&plex,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1671,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1672 ierr = DMPlexInsertBoundaryValues(plex, PETSC_TRUE, X, PETSC_MIN_REAL(-1.7976931348623157e+308), NULL((void*)0), NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1672,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1673 ierr = DMDestroy(&plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1673,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1674 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1675}
1676
1677PetscErrorCode DMPlexComputeBdJacobian_Single_Internal(DM dm, PetscReal t, DMLabel label, PetscInt numValues, const PetscInt values[], PetscInt fieldI, Vec locX, Vec locX_t, PetscReal X_tShift, Mat Jac, Mat JacP, DMField coordField, IS facetIS)
1678{
1679 DM_Plex *mesh = (DM_Plex *) dm->data;
1680 DM plex = NULL((void*)0), plexA = NULL((void*)0), tdm;
1681 PetscDS prob, probAux = NULL((void*)0);
1682 PetscSection section, sectionAux = NULL((void*)0);
1683 PetscSection globalSection, subSection = NULL((void*)0);
1684 Vec locA = NULL((void*)0), tv;
1685 PetscScalar *u = NULL((void*)0), *u_t = NULL((void*)0), *a = NULL((void*)0), *elemMat = NULL((void*)0);
1686 PetscInt v;
1687 PetscInt Nf, totDim, totDimAux = 0;
1688 PetscBool isMatISP, transform;
1689 PetscErrorCode ierr;
1690
1691 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 1691; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1692 ierr = DMConvert(dm, DMPLEX"plex", &plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1692,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1693 ierr = DMHasBasisTransform(dm, &transform);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1693,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1694 ierr = DMGetBasisTransformDM_Internal(dm, &tdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1694,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1695 ierr = DMGetBasisTransformVec_Internal(dm, &tv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1695,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1696 ierr = DMGetSection(dm, &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1696,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1697 ierr = DMGetDS(dm, &prob);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1697,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1698 ierr = PetscDSGetNumFields(prob, &Nf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1698,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1699 ierr = PetscDSGetTotalDimension(prob, &totDim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1699,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1700 ierr = PetscObjectQuery((PetscObject) dm, "A", (PetscObject *) &locA);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1700,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1701 if (locA) {
1702 DM dmAux;
1703
1704 ierr = VecGetDM(locA, &dmAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1704,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1705 ierr = DMConvert(dmAux, DMPLEX"plex", &plexA);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1705,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1706 ierr = DMGetDS(plexA, &probAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1706,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1707 ierr = PetscDSGetTotalDimension(probAux, &totDimAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1707,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1708 ierr = DMGetSection(plexA, &sectionAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1708,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1709 }
1710
1711 ierr = PetscObjectTypeCompare((PetscObject) JacP, MATIS"is", &isMatISP);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1711,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1712 ierr = DMGetGlobalSection(dm, &globalSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1712,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1713 if (isMatISP) {ierr = DMPlexGetSubdomainSection(dm, &subSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1713,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1714 for (v = 0; v < numValues; ++v) {
1715 PetscFEGeom *fgeom;
1716 PetscInt maxDegree;
1717 PetscQuadrature qGeom = NULL((void*)0);
1718 IS pointIS;
1719 const PetscInt *points;
1720 PetscInt numFaces, face, Nq;
1721
1722 ierr = DMLabelGetStratumIS(label, values[v], &pointIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1722,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1723 if (!pointIS) continue; /* No points with that id on this process */
1724 {
1725 IS isectIS;
1726
1727 /* TODO: Special cases of ISIntersect where it is quick to check a prior if one is a superset of the other */
1728 ierr = ISIntersect_Caching_Internal(facetIS,pointIS,&isectIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1728,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1729 ierr = ISDestroy(&pointIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1729,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1730 pointIS = isectIS;
1731 }
1732 ierr = ISGetLocalSize(pointIS, &numFaces);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1732,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1733 ierr = ISGetIndices(pointIS, &points);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1733,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1734 ierr = PetscMalloc4(numFaces*totDim, &u, locX_t ? numFaces*totDim : 0, &u_t, numFaces*totDim*totDim, &elemMat, locA ? numFaces*totDimAux : 0, &a)PetscMallocA(4,PETSC_FALSE,1734,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(numFaces*totDim)*sizeof(**(&u)),(&u),(size_t
)(locX_t ? numFaces*totDim : 0)*sizeof(**(&u_t)),(&u_t
),(size_t)(numFaces*totDim*totDim)*sizeof(**(&elemMat)),(
&elemMat),(size_t)(locA ? numFaces*totDimAux : 0)*sizeof(
**(&a)),(&a));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1734,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1735 ierr = DMFieldGetDegree(coordField,pointIS,NULL((void*)0),&maxDegree);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1735,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1736 if (maxDegree <= 1) {
1737 ierr = DMFieldCreateDefaultQuadrature(coordField,pointIS,&qGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1737,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1738 }
1739 if (!qGeom) {
1740 PetscFE fe;
1741
1742 ierr = PetscDSGetDiscretization(prob, fieldI, (PetscObject *) &fe);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1742,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1743 ierr = PetscFEGetFaceQuadrature(fe, &qGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1743,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1744 ierr = PetscObjectReference((PetscObject)qGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1744,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1745 }
1746 ierr = PetscQuadratureGetData(qGeom, NULL((void*)0), NULL((void*)0), &Nq, NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1746,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1747 ierr = DMSNESGetFEGeom(coordField,pointIS,qGeom,PETSC_TRUE,&fgeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1747,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1748 for (face = 0; face < numFaces; ++face) {
1749 const PetscInt point = points[face], *support, *cone;
1750 PetscScalar *x = NULL((void*)0);
1751 PetscInt i, coneSize, faceLoc;
1752
1753 ierr = DMPlexGetSupport(dm, point, &support);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1753,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1754 ierr = DMPlexGetConeSize(dm, support[0], &coneSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1754,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1755 ierr = DMPlexGetCone(dm, support[0], &cone);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1755,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1756 for (faceLoc = 0; faceLoc < coneSize; ++faceLoc) if (cone[faceLoc] == point) break;
1757 if (faceLoc == coneSize) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_PLIB, "Could not find face %d in cone of support[0] %d", point, support[0])return PetscError(((MPI_Comm)0x44000001),1757,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,77,PETSC_ERROR_INITIAL,"Could not find face %d in cone of support[0] %d"
,point,support[0]);
1758 fgeom->face[face][0] = faceLoc;
1759 ierr = DMPlexVecGetClosure(plex, section, locX, support[0], NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1759,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1760 for (i = 0; i < totDim; ++i) u[face*totDim+i] = x[i];
1761 ierr = DMPlexVecRestoreClosure(plex, section, locX, support[0], NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1761,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1762 if (locX_t) {
1763 ierr = DMPlexVecGetClosure(plex, section, locX_t, support[0], NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1763,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1764 for (i = 0; i < totDim; ++i) u_t[face*totDim+i] = x[i];
1765 ierr = DMPlexVecRestoreClosure(plex, section, locX_t, support[0], NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1765,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1766 }
1767 if (locA) {
1768 PetscInt subp;
1769 ierr = DMPlexGetSubpoint(plexA, support[0], &subp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1769,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1770 ierr = DMPlexVecGetClosure(plexA, sectionAux, locA, subp, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1770,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1771 for (i = 0; i < totDimAux; ++i) a[face*totDimAux+i] = x[i];
1772 ierr = DMPlexVecRestoreClosure(plexA, sectionAux, locA, subp, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1772,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1773 }
1774 }
1775 ierr = PetscArrayzero(elemMat, numFaces*totDim*totDim)PetscMemzero(elemMat,(numFaces*totDim*totDim)*sizeof(*(elemMat
)));;CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1775,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1776 {
1777 PetscFE fe;
1778 PetscInt Nb;
1779 /* Conforming batches */
1780 PetscInt numChunks, numBatches, numBlocks, Ne, blockSize, batchSize;
1781 /* Remainder */
1782 PetscFEGeom *chunkGeom = NULL((void*)0);
1783 PetscInt fieldJ, Nr, offset;
1784
1785 ierr = PetscDSGetDiscretization(prob, fieldI, (PetscObject *) &fe);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1785,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1786 ierr = PetscFEGetDimension(fe, &Nb);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1786,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1787 ierr = PetscFEGetTileSizes(fe, NULL((void*)0), &numBlocks, NULL((void*)0), &numBatches);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1787,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1788 blockSize = Nb;
1789 batchSize = numBlocks * blockSize;
1790 ierr = PetscFESetTileSizes(fe, blockSize, numBlocks, batchSize, numBatches);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1790,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1791 numChunks = numFaces / (numBatches*batchSize);
1792 Ne = numChunks*numBatches*batchSize;
1793 Nr = numFaces % (numBatches*batchSize);
1794 offset = numFaces - Nr;
1795 ierr = PetscFEGeomGetChunk(fgeom,0,offset,&chunkGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1795,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1796 for (fieldJ = 0; fieldJ < Nf; ++fieldJ) {
1797 ierr = PetscFEIntegrateBdJacobian(prob, fieldI, fieldJ, Ne, chunkGeom, u, u_t, probAux, a, t, X_tShift, elemMat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1797,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1798 }
1799 ierr = PetscFEGeomGetChunk(fgeom,offset,numFaces,&chunkGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1799,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1800 for (fieldJ = 0; fieldJ < Nf; ++fieldJ) {
1801 ierr = PetscFEIntegrateBdJacobian(prob, fieldI, fieldJ, Nr, chunkGeom, &u[offset*totDim], u_t ? &u_t[offset*totDim] : NULL((void*)0), probAux, a ? &a[offset*totDimAux] : NULL((void*)0), t, X_tShift, &elemMat[offset*totDim*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1801,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1802 }
1803 ierr = PetscFEGeomRestoreChunk(fgeom,offset,numFaces,&chunkGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1803,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1804 }
1805 for (face = 0; face < numFaces; ++face) {
1806 const PetscInt point = points[face], *support;
1807
1808 /* Transform to global basis before insertion in Jacobian */
1809 ierr = DMPlexGetSupport(plex, point, &support);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1809,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1810 if (transform) {ierr = DMPlexBasisTransformPointTensor_Internal(dm, tdm, tv, support[0], PETSC_TRUE, totDim, &elemMat[face*totDim*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1810,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1811 if (mesh->printFEM > 1) {ierr = DMPrintCellMatrix(point, "BdJacobian", totDim, totDim, &elemMat[face*totDim*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1811,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1812 if (!isMatISP) {
1813 ierr = DMPlexMatSetClosure(plex, section, globalSection, JacP, support[0], &elemMat[face*totDim*totDim], ADD_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1813,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1814 } else {
1815 Mat lJ;
1816
1817 ierr = MatISGetLocalMat(JacP, &lJ);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1817,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1818 ierr = DMPlexMatSetClosure(plex, section, subSection, lJ, support[0], &elemMat[face*totDim*totDim], ADD_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1818,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1819 }
1820 }
1821 ierr = DMSNESRestoreFEGeom(coordField,pointIS,qGeom,PETSC_TRUE,&fgeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1821,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1822 ierr = PetscQuadratureDestroy(&qGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1822,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1823 ierr = ISRestoreIndices(pointIS, &points);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1823,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1824 ierr = ISDestroy(&pointIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1824,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1825 ierr = PetscFree4(u, u_t, elemMat, a)PetscFreeA(4,1825,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,&(u),&(u_t),&(elemMat),&(a));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1825,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1826 }
1827 if (plex) {ierr = DMDestroy(&plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1827,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1828 if (plexA) {ierr = DMDestroy(&plexA);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1828,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1829 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1830}
1831
1832PetscErrorCode DMPlexComputeBdJacobianSingle(DM dm, PetscReal t, DMLabel label, PetscInt numValues, const PetscInt values[], PetscInt field, Vec locX, Vec locX_t, PetscReal X_tShift, Mat Jac, Mat JacP)
1833{
1834 DMField coordField;
1835 DMLabel depthLabel;
1836 IS facetIS;
1837 PetscInt dim;
1838 PetscErrorCode ierr;
1839
1840 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 1840; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1841 ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1841,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1842 ierr = DMPlexGetDepthLabel(dm, &depthLabel);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1842,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1843 ierr = DMLabelGetStratumIS(depthLabel, dim-1, &facetIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1843,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1844 ierr = DMGetCoordinateField(dm, &coordField);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1844,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1845 ierr = DMPlexComputeBdJacobian_Single_Internal(dm, t, label, numValues, values, field, locX, locX_t, X_tShift, Jac, JacP, coordField, facetIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1845,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1846 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1847}
1848
1849PetscErrorCode DMPlexComputeBdJacobian_Internal(DM dm, Vec locX, Vec locX_t, PetscReal t, PetscReal X_tShift, Mat Jac, Mat JacP, void *user)
1850{
1851 PetscDS prob;
1852 PetscInt dim, numBd, bd;
1853 DMLabel depthLabel;
1854 DMField coordField = NULL((void*)0);
1855 IS facetIS;
1856 PetscErrorCode ierr;
1857
1858 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 1858; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1859 ierr = DMGetDS(dm, &prob);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1859,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1860 ierr = DMPlexGetDepthLabel(dm, &depthLabel);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1860,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1861 ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1861,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1862 ierr = DMLabelGetStratumIS(depthLabel, dim-1, &facetIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1862,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1863 ierr = PetscDSGetNumBoundary(prob, &numBd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1863,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1864 ierr = DMGetCoordinateField(dm, &coordField);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1864,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1865 for (bd = 0; bd < numBd; ++bd) {
1866 DMBoundaryConditionType type;
1867 const char *bdLabel;
1868 DMLabel label;
1869 const PetscInt *values;
1870 PetscInt fieldI, numValues;
1871 PetscObject obj;
1872 PetscClassId id;
1873
1874 ierr = PetscDSGetBoundary(prob, bd, &type, NULL((void*)0), &bdLabel, &fieldI, NULL((void*)0), NULL((void*)0), NULL((void*)0), &numValues, &values, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1874,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1875 ierr = PetscDSGetDiscretization(prob, fieldI, &obj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1875,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1876 ierr = PetscObjectGetClassId(obj, &id);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1876,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1877 if ((id != PETSCFE_CLASSID) || (type & DM_BC_ESSENTIAL)) continue;
1878 ierr = DMGetLabel(dm, bdLabel, &label);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1878,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1879 ierr = DMPlexComputeBdJacobian_Single_Internal(dm, t, label, numValues, values, fieldI, locX, locX_t, X_tShift, Jac, JacP, coordField, facetIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1879,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1880 }
1881 ierr = ISDestroy(&facetIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1881,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1882 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1883}
1884
1885PetscErrorCode DMPlexComputeJacobian_Internal(DM dm, IS cellIS, PetscReal t, PetscReal X_tShift, Vec X, Vec X_t, Mat Jac, Mat JacP,void *user)
1886{
1887 DM_Plex *mesh = (DM_Plex *) dm->data;
1888 const char *name = "Jacobian";
1889 DM dmAux, plex, tdm;
1890 Vec A, tv;
1891 DMField coordField;
1892 PetscDS prob, probAux = NULL((void*)0);
1893 PetscSection section, globalSection, subSection, sectionAux;
1894 PetscScalar *elemMat, *elemMatP, *elemMatD, *u, *u_t, *a = NULL((void*)0);
1895 const PetscInt *cells;
1896 PetscInt Nf, fieldI, fieldJ;
1897 PetscInt totDim, totDimAux, cStart, cEnd, numCells, c;
1898 PetscBool isMatIS, isMatISP, hasJac, hasPrec, hasDyn, hasFV = PETSC_FALSE, transform;
1899 PetscErrorCode ierr;
1900
1901 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 1901; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1902 ierr = PetscLogEventBegin(DMPLEX_JacobianFEM,dm,0,0,0)(((PetscLogPLB && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[DMPLEX_JacobianFEM].active) ? (*PetscLogPLB)((DMPLEX_JacobianFEM
),0,(PetscObject)(dm),(PetscObject)(0),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1902,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1903 ierr = DMHasBasisTransform(dm, &transform);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1903,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1904 ierr = DMGetBasisTransformDM_Internal(dm, &tdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1904,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1905 ierr = DMGetBasisTransformVec_Internal(dm, &tv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1905,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1906 ierr = DMGetSection(dm, &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1906,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1907 ierr = PetscObjectTypeCompare((PetscObject) JacP, MATIS"is", &isMatISP);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1907,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1908 ierr = DMGetGlobalSection(dm, &globalSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1908,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1909 if (isMatISP) {ierr = DMPlexGetSubdomainSection(dm, &subSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1909,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1910 ierr = DMGetDS(dm, &prob);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1910,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1911 ierr = PetscDSGetTotalDimension(prob, &totDim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1911,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1912 ierr = PetscDSHasJacobian(prob, &hasJac);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1912,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1913 ierr = PetscDSHasJacobianPreconditioner(prob, &hasPrec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1913,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1914 ierr = PetscDSHasDynamicJacobian(prob, &hasDyn);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1914,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1915 hasDyn = hasDyn && (X_tShift != 0.0) ? PETSC_TRUE : PETSC_FALSE;
1916 ierr = PetscSectionGetNumFields(section, &Nf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1916,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1917 ierr = ISGetLocalSize(cellIS, &numCells);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1917,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1918 ierr = ISGetPointRange(cellIS, &cStart, &cEnd, &cells);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1918,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1919 ierr = PetscObjectQuery((PetscObject) dm, "dmAux", (PetscObject *) &dmAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1919,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1920 ierr = PetscObjectQuery((PetscObject) dm, "A", (PetscObject *) &A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1920,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1921 if (dmAux) {
1922 ierr = DMConvert(dmAux, DMPLEX"plex", &plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1922,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1923 ierr = DMGetSection(plex, &sectionAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1923,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1924 ierr = DMGetDS(dmAux, &probAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1924,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1925 ierr = PetscDSGetTotalDimension(probAux, &totDimAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1925,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1926 }
1927 ierr = PetscMalloc5(numCells*totDim,&u,X_t ? numCells*totDim : 0,&u_t,hasJac ? numCells*totDim*totDim : 0,&elemMat,hasPrec ? numCells*totDim*totDim : 0, &elemMatP,hasDyn ? numCells*totDim*totDim : 0, &elemMatD)PetscMallocA(5,PETSC_FALSE,1927,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(numCells*totDim)*sizeof(**(&u)),(&u),(size_t
)(X_t ? numCells*totDim : 0)*sizeof(**(&u_t)),(&u_t),
(size_t)(hasJac ? numCells*totDim*totDim : 0)*sizeof(**(&
elemMat)),(&elemMat),(size_t)(hasPrec ? numCells*totDim*totDim
: 0)*sizeof(**(&elemMatP)),(&elemMatP),(size_t)(hasDyn
? numCells*totDim*totDim : 0)*sizeof(**(&elemMatD)),(&
elemMatD));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1927,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1928 if (dmAux) {ierr = PetscMalloc1(numCells*totDimAux, &a)PetscMallocA(1,PETSC_FALSE,1928,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(numCells*totDimAux)*sizeof(**(&a)),(&a));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1928,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1929 ierr = DMGetCoordinateField(dm, &coordField);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1929,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1930 for (c = cStart; c < cEnd; ++c) {
1931 const PetscInt cell = cells ? cells[c] : c;
1932 const PetscInt cind = c - cStart;
1933 PetscScalar *x = NULL((void*)0), *x_t = NULL((void*)0);
1934 PetscInt i;
1935
1936 ierr = DMPlexVecGetClosure(dm, section, X, cell, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1936,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1937 for (i = 0; i < totDim; ++i) u[cind*totDim+i] = x[i];
1938 ierr = DMPlexVecRestoreClosure(dm, section, X, cell, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1938,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1939 if (X_t) {
1940 ierr = DMPlexVecGetClosure(dm, section, X_t, cell, NULL((void*)0), &x_t);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1940,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1941 for (i = 0; i < totDim; ++i) u_t[cind*totDim+i] = x_t[i];
1942 ierr = DMPlexVecRestoreClosure(dm, section, X_t, cell, NULL((void*)0), &x_t);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1942,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1943 }
1944 if (dmAux) {
1945 PetscInt subcell;
1946 ierr = DMPlexGetAuxiliaryPoint(dm, dmAux, cell, &subcell);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1946,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1947 ierr = DMPlexVecGetClosure(plex, sectionAux, A, subcell, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1947,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1948 for (i = 0; i < totDimAux; ++i) a[cind*totDimAux+i] = x[i];
1949 ierr = DMPlexVecRestoreClosure(plex, sectionAux, A, subcell, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1949,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1950 }
1951 }
1952 if (hasJac) {ierr = PetscArrayzero(elemMat, numCells*totDim*totDim)PetscMemzero(elemMat,(numCells*totDim*totDim)*sizeof(*(elemMat
)));;CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1952,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1953 if (hasPrec) {ierr = PetscArrayzero(elemMatP, numCells*totDim*totDim)PetscMemzero(elemMatP,(numCells*totDim*totDim)*sizeof(*(elemMatP
)));;CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1953,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1954 if (hasDyn) {ierr = PetscArrayzero(elemMatD, numCells*totDim*totDim)PetscMemzero(elemMatD,(numCells*totDim*totDim)*sizeof(*(elemMatD
)));;CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1954,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1955 for (fieldI = 0; fieldI < Nf; ++fieldI) {
1956 PetscClassId id;
1957 PetscFE fe;
1958 PetscQuadrature qGeom = NULL((void*)0);
1959 PetscInt Nb;
1960 /* Conforming batches */
1961 PetscInt numChunks, numBatches, numBlocks, Ne, blockSize, batchSize;
1962 /* Remainder */
1963 PetscInt Nr, offset, Nq;
1964 PetscInt maxDegree;
1965 PetscFEGeom *cgeomFEM, *chunkGeom = NULL((void*)0), *remGeom = NULL((void*)0);
1966
1967 ierr = PetscDSGetDiscretization(prob, fieldI, (PetscObject *) &fe);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1967,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1968 ierr = PetscObjectGetClassId((PetscObject) fe, &id);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1968,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1969 if (id == PETSCFV_CLASSID) {hasFV = PETSC_TRUE; continue;}
1970 ierr = PetscFEGetDimension(fe, &Nb);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1970,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1971 ierr = PetscFEGetTileSizes(fe, NULL((void*)0), &numBlocks, NULL((void*)0), &numBatches);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1971,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1972 ierr = DMFieldGetDegree(coordField,cellIS,NULL((void*)0),&maxDegree);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1972,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1973 if (maxDegree <= 1) {
1974 ierr = DMFieldCreateDefaultQuadrature(coordField,cellIS,&qGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1974,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1975 }
1976 if (!qGeom) {
1977 ierr = PetscFEGetQuadrature(fe,&qGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1977,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1978 ierr = PetscObjectReference((PetscObject)qGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1978,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1979 }
1980 ierr = PetscQuadratureGetData(qGeom, NULL((void*)0), NULL((void*)0), &Nq, NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1980,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1981 ierr = DMSNESGetFEGeom(coordField,cellIS,qGeom,PETSC_FALSE,&cgeomFEM);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1981,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1982 blockSize = Nb;
1983 batchSize = numBlocks * blockSize;
1984 ierr = PetscFESetTileSizes(fe, blockSize, numBlocks, batchSize, numBatches);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1984,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1985 numChunks = numCells / (numBatches*batchSize);
1986 Ne = numChunks*numBatches*batchSize;
1987 Nr = numCells % (numBatches*batchSize);
1988 offset = numCells - Nr;
1989 ierr = PetscFEGeomGetChunk(cgeomFEM,0,offset,&chunkGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1989,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1990 ierr = PetscFEGeomGetChunk(cgeomFEM,offset,numCells,&remGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1990,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1991 for (fieldJ = 0; fieldJ < Nf; ++fieldJ) {
1992 if (hasJac) {
1993 ierr = PetscFEIntegrateJacobian(prob, PETSCFE_JACOBIAN, fieldI, fieldJ, Ne, chunkGeom, u, u_t, probAux, a, t, X_tShift, elemMat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1993,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1994 ierr = PetscFEIntegrateJacobian(prob, PETSCFE_JACOBIAN, fieldI, fieldJ, Nr, remGeom, &u[offset*totDim], u_t ? &u_t[offset*totDim] : NULL((void*)0), probAux, &a[offset*totDimAux], t, X_tShift, &elemMat[offset*totDim*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1994,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1995 }
1996 if (hasPrec) {
1997 ierr = PetscFEIntegrateJacobian(prob, PETSCFE_JACOBIAN_PRE, fieldI, fieldJ, Ne, chunkGeom, u, u_t, probAux, a, t, X_tShift, elemMatP);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1997,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1998 ierr = PetscFEIntegrateJacobian(prob, PETSCFE_JACOBIAN_PRE, fieldI, fieldJ, Nr, remGeom, &u[offset*totDim], u_t ? &u_t[offset*totDim] : NULL((void*)0), probAux, &a[offset*totDimAux], t, X_tShift, &elemMatP[offset*totDim*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1998,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1999 }
2000 if (hasDyn) {
2001 ierr = PetscFEIntegrateJacobian(prob, PETSCFE_JACOBIAN_DYN, fieldI, fieldJ, Ne, chunkGeom, u, u_t, probAux, a, t, X_tShift, elemMatD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2001,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2002 ierr = PetscFEIntegrateJacobian(prob, PETSCFE_JACOBIAN_DYN, fieldI, fieldJ, Nr, remGeom, &u[offset*totDim], u_t ? &u_t[offset*totDim] : NULL((void*)0), probAux, &a[offset*totDimAux], t, X_tShift, &elemMatD[offset*totDim*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2002,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2003 }
2004 }
2005 ierr = PetscFEGeomRestoreChunk(cgeomFEM,offset,numCells,&remGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2005,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2006 ierr = PetscFEGeomRestoreChunk(cgeomFEM,0,offset,&chunkGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2006,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2007 ierr = DMSNESRestoreFEGeom(coordField,cellIS,qGeom,PETSC_FALSE,&cgeomFEM);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2007,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2008 ierr = PetscQuadratureDestroy(&qGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2008,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2009 }
2010 /* Add contribution from X_t */
2011 if (hasDyn) {for (c = 0; c < numCells*totDim*totDim; ++c) elemMat[c] += X_tShift*elemMatD[c];}
2012 if (hasFV) {
2013 PetscClassId id;
2014 PetscFV fv;
2015 PetscInt offsetI, NcI, NbI = 1, fc, f;
2016
2017 for (fieldI = 0; fieldI < Nf; ++fieldI) {
2018 ierr = PetscDSGetDiscretization(prob, fieldI, (PetscObject *) &fv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2018,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2019 ierr = PetscDSGetFieldOffset(prob, fieldI, &offsetI);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2019,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2020 ierr = PetscObjectGetClassId((PetscObject) fv, &id);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2020,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2021 if (id != PETSCFV_CLASSID) continue;
2022 /* Put in the identity */
2023 ierr = PetscFVGetNumComponents(fv, &NcI);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2023,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2024 for (c = cStart; c < cEnd; ++c) {
2025 const PetscInt cind = c - cStart;
2026 const PetscInt eOffset = cind*totDim*totDim;
2027 for (fc = 0; fc < NcI; ++fc) {
2028 for (f = 0; f < NbI; ++f) {
2029 const PetscInt i = offsetI + f*NcI+fc;
2030 if (hasPrec) {
2031 if (hasJac) {elemMat[eOffset+i*totDim+i] = 1.0;}
2032 elemMatP[eOffset+i*totDim+i] = 1.0;
2033 } else {elemMat[eOffset+i*totDim+i] = 1.0;}
2034 }
2035 }
2036 }
2037 }
2038 /* No allocated space for FV stuff, so ignore the zero entries */
2039 ierr = MatSetOption(JacP, MAT_IGNORE_ZERO_ENTRIES, PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2039,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2040 }
2041 /* Insert values into matrix */
2042 isMatIS = PETSC_FALSE;
2043 if (hasPrec && hasJac) {
2044 ierr = PetscObjectTypeCompare((PetscObject) JacP, MATIS"is", &isMatIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2044,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2045 }
2046 if (isMatIS && !subSection) {
2047 ierr = DMPlexGetSubdomainSection(dm, &subSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2047,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2048 }
2049 for (c = cStart; c < cEnd; ++c) {
2050 const PetscInt cell = cells ? cells[c] : c;
2051 const PetscInt cind = c - cStart;
2052
2053 /* Transform to global basis before insertion in Jacobian */
2054 if (transform) {ierr = DMPlexBasisTransformPointTensor_Internal(dm, tdm, tv, cell, PETSC_TRUE, totDim, &elemMat[cind*totDim*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2054,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2055 if (hasPrec) {
2056 if (hasJac) {
2057 if (mesh->printFEM > 1) {ierr = DMPrintCellMatrix(cell, name, totDim, totDim, &elemMat[cind*totDim*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2057,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2058 if (!isMatIS) {
2059 ierr = DMPlexMatSetClosure(dm, section, globalSection, Jac, cell, &elemMat[cind*totDim*totDim], ADD_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2059,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2060 } else {
2061 Mat lJ;
2062
2063 ierr = MatISGetLocalMat(Jac,&lJ);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2063,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2064 ierr = DMPlexMatSetClosure(dm, section, subSection, lJ, cell, &elemMat[cind*totDim*totDim], ADD_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2064,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2065 }
2066 }
2067 if (mesh->printFEM > 1) {ierr = DMPrintCellMatrix(cell, name, totDim, totDim, &elemMatP[cind*totDim*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2067,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2068 if (!isMatISP) {
2069 ierr = DMPlexMatSetClosure(dm, section, globalSection, JacP, cell, &elemMatP[cind*totDim*totDim], ADD_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2069,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2070 } else {
2071 Mat lJ;
2072
2073 ierr = MatISGetLocalMat(JacP,&lJ);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2073,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2074 ierr = DMPlexMatSetClosure(dm, section, subSection, lJ, cell, &elemMatP[cind*totDim*totDim], ADD_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2074,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2075 }
2076 } else {
2077 if (mesh->printFEM > 1) {ierr = DMPrintCellMatrix(cell, name, totDim, totDim, &elemMat[cind*totDim*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2077,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2078 if (!isMatISP) {
2079 ierr = DMPlexMatSetClosure(dm, section, globalSection, JacP, cell, &elemMat[cind*totDim*totDim], ADD_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2079,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2080 } else {
2081 Mat lJ;
2082
2083 ierr = MatISGetLocalMat(JacP,&lJ);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2083,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2084 ierr = DMPlexMatSetClosure(dm, section, subSection, lJ, cell, &elemMat[cind*totDim*totDim], ADD_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2084,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2085 }
2086 }
2087 }
2088 ierr = ISRestorePointRange(cellIS, &cStart, &cEnd, &cells);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2088,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2089 if (hasFV) {ierr = MatSetOption(JacP, MAT_IGNORE_ZERO_ENTRIES, PETSC_FALSE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2089,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2090 ierr = PetscFree5(u,u_t,elemMat,elemMatP,elemMatD)PetscFreeA(5,2090,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,&(u),&(u_t),&(elemMat),&(elemMatP),&(elemMatD
));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2090,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2091 if (dmAux) {
2092 ierr = PetscFree(a)((*PetscTrFree)((void*)(a),2092,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
) || ((a) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2092,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2093 ierr = DMDestroy(&plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2093,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2094 }
2095 /* Compute boundary integrals */
2096 ierr = DMPlexComputeBdJacobian_Internal(dm, X, X_t, t, X_tShift, Jac, JacP, user);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2096,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2097 /* Assemble matrix */
2098 if (hasJac && hasPrec) {
2099 ierr = MatAssemblyBegin(Jac, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2099,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2100 ierr = MatAssemblyEnd(Jac, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2100,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2101 }
2102 ierr = MatAssemblyBegin(JacP, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2102,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2103 ierr = MatAssemblyEnd(JacP, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2103,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2104 ierr = PetscLogEventEnd(DMPLEX_JacobianFEM,dm,0,0,0)(((PetscLogPLE && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[DMPLEX_JacobianFEM].active) ? (*PetscLogPLE)((DMPLEX_JacobianFEM
),0,(PetscObject)(dm),(PetscObject)(0),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2104,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2105 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
2106}
2107
2108/*@
2109 DMPlexComputeJacobianAction - Form the local portion of the Jacobian action Z = J(X) Y at the local solution X using pointwise functions specified by the user.
2110
2111 Input Parameters:
2112+ dm - The mesh
2113. cellIS -
2114. t - The time
2115. X_tShift - The multiplier for the Jacobian with repsect to X_t
2116. X - Local solution vector
2117. X_t - Time-derivative of the local solution vector
2118. Y - Local input vector
2119- user - The user context
2120
2121 Output Parameter:
2122. Z - Local output vector
2123
2124 Note:
2125 We form the residual one batch of elements at a time. This allows us to offload work onto an accelerator,
2126 like a GPU, or vectorize on a multicore machine.
2127
2128 Level: developer
2129
2130.seealso: FormFunctionLocal()
2131@*/
2132PetscErrorCode DMPlexComputeJacobianAction(DM dm, IS cellIS, PetscReal t, PetscReal X_tShift, Vec X, Vec X_t, Vec Y, Vec Z, void *user)
2133{
2134 DM_Plex *mesh = (DM_Plex *) dm->data;
2135 const char *name = "Jacobian";
2136 DM dmAux, plex, plexAux = NULL((void*)0);
2137 Vec A;
2138 PetscDS prob, probAux = NULL((void*)0);
2139 PetscQuadrature quad;
2140 PetscSection section, globalSection, sectionAux;
2141 PetscScalar *elemMat, *elemMatD, *u, *u_t, *a = NULL((void*)0), *y, *z;
2142 PetscInt Nf, fieldI, fieldJ;
2143 PetscInt totDim, totDimAux = 0;
2144 const PetscInt *cells;
2145 PetscInt cStart, cEnd, numCells, c;
2146 PetscBool hasDyn;
2147 DMField coordField;
2148 PetscErrorCode ierr;
2149
2150 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 2150; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
2151 ierr = PetscLogEventBegin(DMPLEX_JacobianFEM,dm,0,0,0)(((PetscLogPLB && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[DMPLEX_JacobianFEM].active) ? (*PetscLogPLB)((DMPLEX_JacobianFEM
),0,(PetscObject)(dm),(PetscObject)(0),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2151,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2152 ierr = DMSNESConvertPlex(dm, &plex, PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2152,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2153 if (!cellIS) {
2154 PetscInt depth;
2155
2156 ierr = DMPlexGetDepth(plex, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2156,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2157 ierr = DMGetStratumIS(plex, "dim", depth, &cellIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2157,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2158 if (!cellIS) {ierr = DMGetStratumIS(plex, "depth", depth, &cellIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2158,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2159 } else {
2160 ierr = PetscObjectReference((PetscObject) cellIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2160,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2161 }
2162 ierr = DMGetSection(dm, &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2162,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2163 ierr = DMGetGlobalSection(dm, &globalSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2163,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2164 ierr = DMGetDS(dm, &prob);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2164,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2165 ierr = PetscDSGetTotalDimension(prob, &totDim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2165,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2166 ierr = PetscDSHasDynamicJacobian(prob, &hasDyn);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2166,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2167 hasDyn = hasDyn && (X_tShift != 0.0) ? PETSC_TRUE : PETSC_FALSE;
2168 ierr = PetscSectionGetNumFields(section, &Nf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2168,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2169 ierr = ISGetLocalSize(cellIS, &numCells);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2169,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2170 ierr = ISGetPointRange(cellIS, &cStart, &cEnd, &cells);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2170,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2171 ierr = PetscObjectQuery((PetscObject) dm, "dmAux", (PetscObject *) &dmAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2171,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2172 ierr = PetscObjectQuery((PetscObject) dm, "A", (PetscObject *) &A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2172,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2173 if (dmAux) {
2174 ierr = DMConvert(dmAux, DMPLEX"plex", &plexAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2174,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2175 ierr = DMGetSection(plexAux, &sectionAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2175,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2176 ierr = DMGetDS(dmAux, &probAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2176,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2177 ierr = PetscDSGetTotalDimension(probAux, &totDimAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2177,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2178 }
2179 ierr = VecSet(Z, 0.0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2179,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2180 ierr = PetscMalloc6(numCells*totDim,&u,X_t ? numCells*totDim : 0,&u_t,numCells*totDim*totDim,&elemMat,hasDyn ? numCells*totDim*totDim : 0, &elemMatD,numCells*totDim,&y,totDim,&z)PetscMallocA(6,PETSC_FALSE,2180,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(numCells*totDim)*sizeof(**(&u)),(&u),(size_t
)(X_t ? numCells*totDim : 0)*sizeof(**(&u_t)),(&u_t),
(size_t)(numCells*totDim*totDim)*sizeof(**(&elemMat)),(&
elemMat),(size_t)(hasDyn ? numCells*totDim*totDim : 0)*sizeof
(**(&elemMatD)),(&elemMatD),(size_t)(numCells*totDim)
*sizeof(**(&y)),(&y),(size_t)(totDim)*sizeof(**(&
z)),(&z));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2180,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2181 if (dmAux) {ierr = PetscMalloc1(numCells*totDimAux, &a)PetscMallocA(1,PETSC_FALSE,2181,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(numCells*totDimAux)*sizeof(**(&a)),(&a));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2181,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2182 ierr = DMGetCoordinateField(dm, &coordField);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2182,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2183 for (c = cStart; c < cEnd; ++c) {
2184 const PetscInt cell = cells ? cells[c] : c;
2185 const PetscInt cind = c - cStart;
2186 PetscScalar *x = NULL((void*)0), *x_t = NULL((void*)0);
2187 PetscInt i;
2188
2189 ierr = DMPlexVecGetClosure(dm, section, X, cell, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2189,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2190 for (i = 0; i < totDim; ++i) u[cind*totDim+i] = x[i];
2191 ierr = DMPlexVecRestoreClosure(dm, section, X, cell, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2191,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2192 if (X_t) {
2193 ierr = DMPlexVecGetClosure(dm, section, X_t, cell, NULL((void*)0), &x_t);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2193,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2194 for (i = 0; i < totDim; ++i) u_t[cind*totDim+i] = x_t[i];
2195 ierr = DMPlexVecRestoreClosure(dm, section, X_t, cell, NULL((void*)0), &x_t);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2195,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2196 }
2197 if (dmAux) {
2198 PetscInt subcell;
2199 ierr = DMPlexGetAuxiliaryPoint(dm, dmAux, cell, &subcell);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2199,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2200 ierr = DMPlexVecGetClosure(plexAux, sectionAux, A, subcell, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2200,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2201 for (i = 0; i < totDimAux; ++i) a[cind*totDimAux+i] = x[i];
2202 ierr = DMPlexVecRestoreClosure(plexAux, sectionAux, A, subcell, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2202,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2203 }
2204 ierr = DMPlexVecGetClosure(dm, section, Y, cell, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2204,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2205 for (i = 0; i < totDim; ++i) y[cind*totDim+i] = x[i];
2206 ierr = DMPlexVecRestoreClosure(dm, section, Y, cell, NULL((void*)0), &x);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2206,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2207 }
2208 ierr = PetscArrayzero(elemMat, numCells*totDim*totDim)PetscMemzero(elemMat,(numCells*totDim*totDim)*sizeof(*(elemMat
)));;CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2208,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2209 if (hasDyn) {ierr = PetscArrayzero(elemMatD, numCells*totDim*totDim)PetscMemzero(elemMatD,(numCells*totDim*totDim)*sizeof(*(elemMatD
)));;CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2209,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2210 for (fieldI = 0; fieldI < Nf; ++fieldI) {
2211 PetscFE fe;
2212 PetscInt Nb;
2213 /* Conforming batches */
2214 PetscInt numChunks, numBatches, numBlocks, Ne, blockSize, batchSize;
2215 /* Remainder */
2216 PetscInt Nr, offset, Nq;
2217 PetscQuadrature qGeom = NULL((void*)0);
2218 PetscInt maxDegree;
2219 PetscFEGeom *cgeomFEM, *chunkGeom = NULL((void*)0), *remGeom = NULL((void*)0);
2220
2221 ierr = PetscDSGetDiscretization(prob, fieldI, (PetscObject *) &fe);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2221,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2222 ierr = PetscFEGetQuadrature(fe, &quad);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2222,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2223 ierr = PetscFEGetDimension(fe, &Nb);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2223,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2224 ierr = PetscFEGetTileSizes(fe, NULL((void*)0), &numBlocks, NULL((void*)0), &numBatches);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2224,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2225 ierr = DMFieldGetDegree(coordField,cellIS,NULL((void*)0),&maxDegree);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2225,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2226 if (maxDegree <= 1) {ierr = DMFieldCreateDefaultQuadrature(coordField,cellIS,&qGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2226,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2227 if (!qGeom) {
2228 ierr = PetscFEGetQuadrature(fe,&qGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2228,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2229 ierr = PetscObjectReference((PetscObject)qGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2229,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2230 }
2231 ierr = PetscQuadratureGetData(qGeom, NULL((void*)0), NULL((void*)0), &Nq, NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2231,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2232 ierr = DMSNESGetFEGeom(coordField,cellIS,qGeom,PETSC_FALSE,&cgeomFEM);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2232,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2233 blockSize = Nb;
2234 batchSize = numBlocks * blockSize;
2235 ierr = PetscFESetTileSizes(fe, blockSize, numBlocks, batchSize, numBatches);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2235,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2236 numChunks = numCells / (numBatches*batchSize);
2237 Ne = numChunks*numBatches*batchSize;
2238 Nr = numCells % (numBatches*batchSize);
2239 offset = numCells - Nr;
2240 ierr = PetscFEGeomGetChunk(cgeomFEM,0,offset,&chunkGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2240,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2241 ierr = PetscFEGeomGetChunk(cgeomFEM,offset,numCells,&remGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2241,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2242 for (fieldJ = 0; fieldJ < Nf; ++fieldJ) {
2243 ierr = PetscFEIntegrateJacobian(prob, PETSCFE_JACOBIAN, fieldI, fieldJ, Ne, chunkGeom, u, u_t, probAux, a, t, X_tShift, elemMat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2243,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2244 ierr = PetscFEIntegrateJacobian(prob, PETSCFE_JACOBIAN, fieldI, fieldJ, Nr, remGeom, &u[offset*totDim], u_t ? &u_t[offset*totDim] : NULL((void*)0), probAux, &a[offset*totDimAux], t, X_tShift, &elemMat[offset*totDim*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2244,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2245 if (hasDyn) {
2246 ierr = PetscFEIntegrateJacobian(prob, PETSCFE_JACOBIAN_DYN, fieldI, fieldJ, Ne, chunkGeom, u, u_t, probAux, a, t, X_tShift, elemMatD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2246,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2247 ierr = PetscFEIntegrateJacobian(prob, PETSCFE_JACOBIAN_DYN, fieldI, fieldJ, Nr, remGeom, &u[offset*totDim], u_t ? &u_t[offset*totDim] : NULL((void*)0), probAux, &a[offset*totDimAux], t, X_tShift, &elemMatD[offset*totDim*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2247,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2248 }
2249 }
2250 ierr = PetscFEGeomRestoreChunk(cgeomFEM,offset,numCells,&remGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2250,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2251 ierr = PetscFEGeomRestoreChunk(cgeomFEM,0,offset,&chunkGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2251,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2252 ierr = DMSNESRestoreFEGeom(coordField,cellIS,qGeom,PETSC_FALSE,&cgeomFEM);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2252,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2253 ierr = PetscQuadratureDestroy(&qGeom);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2253,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2254 }
2255 if (hasDyn) {
2256 for (c = 0; c < numCells*totDim*totDim; ++c) elemMat[c] += X_tShift*elemMatD[c];
2257 }
2258 for (c = cStart; c < cEnd; ++c) {
2259 const PetscInt cell = cells ? cells[c] : c;
2260 const PetscInt cind = c - cStart;
2261 const PetscBLASInt M = totDim, one = 1;
2262 const PetscScalar a = 1.0, b = 0.0;
2263
2264 PetscStackCallBLAS("BLASgemv", BLASgemv_("N", &M, &M, &a, &elemMat[cind*totDim*totDim], &M, &y[cind*totDim], &one, &b, z, &one))do { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = "BLASgemv"; petscstack->file[petscstack->currentsize
] = "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
; petscstack->line[petscstack->currentsize] = 2264; petscstack
->petscroutine[petscstack->currentsize] = PETSC_FALSE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_TRUE || petscstack->hotdepth); } ; } while (0);
dgemv_("N", &M, &M, &a, &elemMat[cind*totDim
*totDim], &M, &y[cind*totDim], &one, &b, z, &
one); do { do {PetscErrorCode _7_ierr = PetscMallocValidate(2264
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
);do {if (__builtin_expect(!!(_7_ierr),0)) return PetscError(
((MPI_Comm)0x44000001),2264,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,_7_ierr,PETSC_ERROR_REPEAT," ");} while (0);} while(0); do {
; if (petscstack && petscstack->currentsize > 0
) { petscstack->currentsize--; petscstack->function[petscstack
->currentsize] = 0; petscstack->file[petscstack->currentsize
] = 0; petscstack->line[petscstack->currentsize] = 0; petscstack
->petscroutine[petscstack->currentsize] = PETSC_FALSE; }
if (petscstack) { petscstack->hotdepth = (((petscstack->
hotdepth-1)<(0)) ? (0) : (petscstack->hotdepth-1)); } ;
} while (0); } while (0); } while(0);
2265 if (mesh->printFEM > 1) {
2266 ierr = DMPrintCellMatrix(c, name, totDim, totDim, &elemMat[cind*totDim*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2266,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2267 ierr = DMPrintCellVector(c, "Y", totDim, &y[cind*totDim]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2267,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2268 ierr = DMPrintCellVector(c, "Z", totDim, z);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2268,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2269 }
2270 ierr = DMPlexVecSetClosure(dm, section, Z, cell, z, ADD_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2270,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2271 }
2272 ierr = PetscFree6(u,u_t,elemMat,elemMatD,y,z)PetscFreeA(6,2272,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,&(u),&(u_t),&(elemMat),&(elemMatD),&(y),
&(z));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2272,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2273 if (mesh->printFEM) {
2274 ierr = PetscPrintf(PETSC_COMM_WORLD, "Z:\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2274,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2275 ierr = VecView(Z, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2275,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2276 }
2277 ierr = PetscFree(a)((*PetscTrFree)((void*)(a),2277,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
) || ((a) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2277,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2278 ierr = ISDestroy(&cellIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2278,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2279 ierr = DMDestroy(&plexAux);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2279,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2280 ierr = DMDestroy(&plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2280,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2281 ierr = PetscLogEventEnd(DMPLEX_JacobianFEM,dm,0,0,0)(((PetscLogPLE && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[DMPLEX_JacobianFEM].active) ? (*PetscLogPLE)((DMPLEX_JacobianFEM
),0,(PetscObject)(dm),(PetscObject)(0),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2281,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2282 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
2283}
2284
2285/*@
2286 DMPlexSNESComputeJacobianFEM - Form the local portion of the Jacobian matrix J at the local solution X using pointwise functions specified by the user.
2287
2288 Input Parameters:
2289+ dm - The mesh
2290. X - Local input vector
2291- user - The user context
2292
2293 Output Parameter:
2294. Jac - Jacobian matrix
2295
2296 Note:
2297 We form the residual one batch of elements at a time. This allows us to offload work onto an accelerator,
2298 like a GPU, or vectorize on a multicore machine.
2299
2300 Level: developer
2301
2302.seealso: FormFunctionLocal()
2303@*/
2304PetscErrorCode DMPlexSNESComputeJacobianFEM(DM dm, Vec X, Mat Jac, Mat JacP,void *user)
2305{
2306 DM plex;
2307 PetscDS prob;
2308 IS cellIS;
2309 PetscBool hasJac, hasPrec;
2310 PetscInt depth;
2311 PetscErrorCode ierr;
2312
2313 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 2313; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
2314 ierr = DMSNESConvertPlex(dm,&plex,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2314,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2315 ierr = DMPlexGetDepth(plex, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2315,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2316 ierr = DMGetStratumIS(plex, "dim", depth, &cellIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2316,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2317 if (!cellIS) {ierr = DMGetStratumIS(plex, "depth", depth, &cellIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2317,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2318 ierr = DMGetDS(dm, &prob);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2318,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2319 ierr = PetscDSHasJacobian(prob, &hasJac);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2319,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2320 ierr = PetscDSHasJacobianPreconditioner(prob, &hasPrec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2320,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2321 if (hasJac && hasPrec) {ierr = MatZeroEntries(Jac);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2321,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2322 ierr = MatZeroEntries(JacP);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2322,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2323 ierr = DMPlexComputeJacobian_Internal(plex, cellIS, 0.0, 0.0, X, NULL((void*)0), Jac, JacP, user);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2323,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2324 ierr = ISDestroy(&cellIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2324,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2325 ierr = DMDestroy(&plex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2325,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2326 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
2327}
2328
2329/*@
2330 DMPlexSetSNESLocalFEM - Use DMPlex's internal FEM routines to compute SNES boundary values, residual, and Jacobian.
2331
2332 Input Parameters:
2333+ dm - The DM object
2334. boundaryctx - the user context that will be passed to pointwise evaluation of boundary values (see PetscDSAddBoundary())
2335. residualctx - the user context that will be passed to pointwise evaluation of finite element residual computations (see PetscDSSetResidual())
2336- jacobianctx - the user context that will be passed to pointwise evaluation of finite element Jacobian construction (see PetscDSSetJacobian())
2337
2338 Level: developer
2339@*/
2340PetscErrorCode DMPlexSetSNESLocalFEM(DM dm, void *boundaryctx, void *residualctx, void *jacobianctx)
2341{
2342 PetscErrorCode ierr;
2343
2344 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 2344; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
2345 ierr = DMSNESSetBoundaryLocal(dm,DMPlexSNESComputeBoundaryFEM,boundaryctx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2345,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2346 ierr = DMSNESSetFunctionLocal(dm,DMPlexSNESComputeResidualFEM,residualctx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2346,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2347 ierr = DMSNESSetJacobianLocal(dm,DMPlexSNESComputeJacobianFEM,jacobianctx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2347,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2348 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
2349}
2350
2351/*@C
2352 DMSNESCheckDiscretization - Check the discretization error of the exact solution
2353
2354 Input Parameters:
2355+ snes - the SNES object
2356. dm - the DM
2357. u - a DM vector
2358. exactFuncs - pointwise functions of the exact solution for each field
2359. ctxs - contexts for the functions
2360. tol - A tolerance for the check, or -1 to print the results instead
2361
2362 Output Parameters:
2363. error - An array which holds the discretization error in each field, or NULL
2364
2365 Level: developer
2366
2367.seealso: DNSNESCheckFromOptions(), DMSNESCheckResidual(), DMSNESCheckJacobian()
2368@*/
2369PetscErrorCode DMSNESCheckDiscretization(SNES snes, DM dm, Vec u, PetscErrorCode (**exactFuncs)(PetscInt, PetscReal, const PetscReal x[], PetscInt, PetscScalar *u, void *ctx), void **ctxs, PetscReal tol, PetscReal error[])
2370{
2371 PetscErrorCode (**exacts)(PetscInt, PetscReal, const PetscReal x[], PetscInt, PetscScalar *u, void *ctx);
2372 void **ectxs;
2373 MPI_Comm comm;
2374 PetscDS ds;
2375 PetscReal *err;
2376 PetscInt Nf, f;
2377 PetscErrorCode ierr;
2378
2379 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 2379; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
2380 PetscValidHeaderSpecific(snes, SNES_CLASSID, 1)do { if (!snes) return PetscError(((MPI_Comm)0x44000001),2380
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",1); if (
!PetscCheckPointer(snes,PETSC_OBJECT)) return PetscError(((MPI_Comm
)0x44000001),2380,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(snes))->classid != SNES_CLASSID) {
if (((PetscObject)(snes))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),2380,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2380,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",1
); } } while (0);
2381 PetscValidHeaderSpecific(dm, DM_CLASSID, 2)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2381,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (!PetscCheckPointer
(dm,PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2381
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2381,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),2381,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",2
); } } while (0);
2382 PetscValidHeaderSpecific(u, VEC_CLASSID, 3)do { if (!u) return PetscError(((MPI_Comm)0x44000001),2382,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",3); if (!PetscCheckPointer
(u,PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2382
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,3); if (((PetscObject)(u))->classid != VEC_CLASSID) { if (
((PetscObject)(u))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2382,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,3); else return PetscError(((MPI_Comm)0x44000001),2382,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",3
); } } while (0);
2383 if (error) PetscValidPointer(error, 6)do { if (!error) return PetscError(((MPI_Comm)0x44000001),2383
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",6); if
(!PetscCheckPointer(error,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),2383,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",6);
} while (0);
2384 ierr = PetscObjectGetComm((PetscObject) snes, &comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2384,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2385 ierr = DMGetDS(dm, &ds);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2385,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2386 ierr = DMGetNumFields(dm, &Nf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2386,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2387 ierr = PetscMalloc3(Nf, &exacts, Nf, &ectxs, PetscMax(1, Nf), &err)PetscMallocA(3,PETSC_FALSE,2387,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(Nf)*sizeof(**(&exacts)),(&exacts),(size_t)(
Nf)*sizeof(**(&ectxs)),(&ectxs),(size_t)((((1)<(Nf
)) ? (Nf) : (1)))*sizeof(**(&err)),(&err));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2387,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2388 for (f = 0; f < Nf; ++f) {ierr = PetscDSGetExactSolution(ds, f, &exacts[f], &ectxs[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2388,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2389 ierr = DMProjectFunction(dm, 0.0, exactFuncs ? exactFuncs : exacts, ctxs ? ctxs : ectxs, INSERT_ALL_VALUES, u);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2389,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2390 ierr = PetscObjectSetName((PetscObject) u, "Exact Solution");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2390,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2391 ierr = PetscObjectSetOptionsPrefix((PetscObject) u, "exact_");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2391,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2392 ierr = VecViewFromOptions(u, NULL((void*)0), "-vec_view");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2392,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2393 if (Nf > 1) {
2394 ierr = DMComputeL2FieldDiff(dm, 0.0, exactFuncs ? exactFuncs : exacts, ctxs ? ctxs : ectxs, u, err);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2394,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2395 if (tol >= 0.0) {
2396 for (f = 0; f < Nf; ++f) {
2397 if (err[f] > tol) SETERRQ3(comm, PETSC_ERR_ARG_WRONG, "L_2 Error %g for field %D exceeds tolerance %g", (double) err[f], f, (double) tol)return PetscError(comm,2397,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,62,PETSC_ERROR_INITIAL,"L_2 Error %g for field %D exceeds tolerance %g"
,(double) err[f],f,(double) tol);
2398 }
2399 } else if (error) {
2400 for (f = 0; f < Nf; ++f) error[f] = err[f];
2401 } else {
2402 ierr = PetscPrintf(comm, "L_2 Error: [");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2402,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2403 for (f = 0; f < Nf; ++f) {
2404 if (f) {ierr = PetscPrintf(comm, ", ");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2404,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2405 ierr = PetscPrintf(comm, "%g", (double)err[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2405,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2406 }
2407 ierr = PetscPrintf(comm, "]\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2407,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2408 }
2409 } else {
2410 ierr = DMComputeL2Diff(dm, 0.0, exactFuncs ? exactFuncs : exacts, ctxs ? ctxs : ectxs , u, &err[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2410,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2411 if (tol >= 0.0) {
2412 if (err[0] > tol) SETERRQ2(comm, PETSC_ERR_ARG_WRONG, "L_2 Error %g exceeds tolerance %g", (double) err[0], (double) tol)return PetscError(comm,2412,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,62,PETSC_ERROR_INITIAL,"L_2 Error %g exceeds tolerance %g",(
double) err[0],(double) tol);
2413 } else if (error) {
2414 error[0] = err[0];
2415 } else {
2416 ierr = PetscPrintf(comm, "L_2 Error: %g\n", (double)err[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2416,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2417 }
2418 }
2419 ierr = PetscFree3(exacts, ectxs, err)PetscFreeA(3,2419,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,&(exacts),&(ectxs),&(err));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2419,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2420 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
2421}
2422
2423/*@C
2424 DMSNESCheckResidual - Check the residual of the exact solution
2425
2426 Input Parameters:
2427+ snes - the SNES object
2428. dm - the DM
2429. u - a DM vector
2430. tol - A tolerance for the check, or -1 to print the results instead
2431
2432 Output Parameters:
2433. residual - The residual norm of the exact solution, or NULL
2434
2435 Level: developer
2436
2437.seealso: DNSNESCheckFromOptions(), DMSNESCheckDiscretization(), DMSNESCheckJacobian()
2438@*/
2439PetscErrorCode DMSNESCheckResidual(SNES snes, DM dm, Vec u, PetscReal tol, PetscReal *residual)
2440{
2441 PetscErrorCode (**exacts)(PetscInt, PetscReal, const PetscReal x[], PetscInt, PetscScalar *u, void *ctx);
2442 void **ectxs;
2443 MPI_Comm comm;
2444 PetscDS ds;
2445 Vec r;
2446 PetscReal res;
2447 PetscInt Nf, f;
2448 PetscBool computeSol = PETSC_FALSE;
2449 PetscErrorCode ierr;
2450
2451 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 2451; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
2452 PetscValidHeaderSpecific(snes, SNES_CLASSID, 1)do { if (!snes) return PetscError(((MPI_Comm)0x44000001),2452
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",1); if (
!PetscCheckPointer(snes,PETSC_OBJECT)) return PetscError(((MPI_Comm
)0x44000001),2452,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(snes))->classid != SNES_CLASSID) {
if (((PetscObject)(snes))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),2452,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2452,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",1
); } } while (0);
2453 PetscValidHeaderSpecific(dm, DM_CLASSID, 2)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2453,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (!PetscCheckPointer
(dm,PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2453
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2453,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),2453,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",2
); } } while (0);
2454 PetscValidHeaderSpecific(u, VEC_CLASSID, 3)do { if (!u) return PetscError(((MPI_Comm)0x44000001),2454,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",3); if (!PetscCheckPointer
(u,PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2454
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,3); if (((PetscObject)(u))->classid != VEC_CLASSID) { if (
((PetscObject)(u))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2454,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,3); else return PetscError(((MPI_Comm)0x44000001),2454,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",3
); } } while (0);
2455 if (residual) PetscValidPointer(residual, 5)do { if (!residual) return PetscError(((MPI_Comm)0x44000001),
2455,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",5); if
(!PetscCheckPointer(residual,PETSC_CHAR)) return PetscError(
((MPI_Comm)0x44000001),2455,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",5);
} while (0);
2456 ierr = PetscObjectGetComm((PetscObject) snes, &comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2456,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2457 ierr = DMGetDS(dm, &ds);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2457,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2458 ierr = DMGetNumFields(dm, &Nf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2458,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2459 ierr = PetscMalloc2(Nf, &exacts, Nf, &ectxs)PetscMallocA(2,PETSC_FALSE,2459,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(Nf)*sizeof(**(&exacts)),(&exacts),(size_t)(
Nf)*sizeof(**(&ectxs)),(&ectxs));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2459,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2460 for (f = 0; f < Nf; ++f) {
2461 ierr = PetscDSGetExactSolution(ds, f, &exacts[f], &ectxs[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2461,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2462 if (exacts[f]) computeSol = PETSC_TRUE;
2463 }
2464 if (computeSol) {ierr = DMProjectFunction(dm, 0.0, exacts, ectxs, INSERT_ALL_VALUES, u);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2464,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2465 ierr = PetscFree2(exacts, ectxs)PetscFreeA(2,2465,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,&(exacts),&(ectxs));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2465,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2466
2467 ierr = VecDuplicate(u, &r);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2467,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2468 ierr = SNESComputeFunction(snes, u, r);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2468,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2469 ierr = VecNorm(r, NORM_2, &res);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2469,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2470 if (tol >= 0.0) {
2471 if (res > tol) SETERRQ2(comm, PETSC_ERR_ARG_WRONG, "L_2 Residual %g exceeds tolerance %g", (double) res, (double) tol)return PetscError(comm,2471,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,62,PETSC_ERROR_INITIAL,"L_2 Residual %g exceeds tolerance %g"
,(double) res,(double) tol);
2472 } else if (residual) {
2473 *residual = res;
2474 } else {
2475 ierr = PetscPrintf(comm, "L_2 Residual: %g\n", (double)res);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2475,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2476 ierr = VecChop(r, 1.0e-10);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2476,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2477 ierr = PetscObjectSetName((PetscObject) r, "Initial Residual");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2477,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2478 ierr = PetscObjectSetOptionsPrefix((PetscObject)r,"res_");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2478,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2479 ierr = VecViewFromOptions(r, NULL((void*)0), "-vec_view");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2479,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2480 }
2481 ierr = VecDestroy(&r);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2481,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2482 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
2483}
2484
2485/*@C
2486 DMSNESCheckJacobian - Check the Jacobian of the exact solution against the residual using the Taylor Test
2487
2488 Input Parameters:
2489+ snes - the SNES object
2490. dm - the DM
2491. u - a DM vector
2492. tol - A tolerance for the check, or -1 to print the results instead
2493
2494 Output Parameters:
2495+ isLinear - Flag indicaing that the function looks linear, or NULL
2496- convRate - The rate of convergence of the linear model, or NULL
2497
2498 Level: developer
2499
2500.seealso: DNSNESCheckFromOptions(), DMSNESCheckDiscretization(), DMSNESCheckResidual()
2501@*/
2502PetscErrorCode DMSNESCheckJacobian(SNES snes, DM dm, Vec u, PetscReal tol, PetscBool *isLinear, PetscReal *convRate)
2503{
2504 PetscErrorCode (**exacts)(PetscInt, PetscReal, const PetscReal x[], PetscInt, PetscScalar *u, void *ctx);
2505 void **ectxs;
2506 MPI_Comm comm;
2507 PetscDS ds;
2508 Mat J, M;
2509 MatNullSpace nullspace;
2510 PetscReal slope, intercept;
2511 PetscInt Nf, f;
2512 PetscBool hasJac, hasPrec, isLin = PETSC_FALSE, computeSol = PETSC_FALSE;
2513 PetscErrorCode ierr;
2514
2515 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 2515; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
2516 PetscValidHeaderSpecific(snes, SNES_CLASSID, 1)do { if (!snes) return PetscError(((MPI_Comm)0x44000001),2516
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",1); if (
!PetscCheckPointer(snes,PETSC_OBJECT)) return PetscError(((MPI_Comm
)0x44000001),2516,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(snes))->classid != SNES_CLASSID) {
if (((PetscObject)(snes))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),2516,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2516,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",1
); } } while (0);
2517 PetscValidHeaderSpecific(dm, DM_CLASSID, 2)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2517,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (!PetscCheckPointer
(dm,PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2517
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2517,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),2517,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",2
); } } while (0);
2518 PetscValidHeaderSpecific(u, VEC_CLASSID, 3)do { if (!u) return PetscError(((MPI_Comm)0x44000001),2518,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",85
,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",3); if (!PetscCheckPointer
(u,PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2518
,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,3); if (((PetscObject)(u))->classid != VEC_CLASSID) { if (
((PetscObject)(u))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2518,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,3); else return PetscError(((MPI_Comm)0x44000001),2518,__func__
,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c",62
,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d",3
); } } while (0);
2519 if (isLinear) PetscValidPointer(isLinear, 5)do { if (!isLinear) return PetscError(((MPI_Comm)0x44000001),
2519,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",5); if
(!PetscCheckPointer(isLinear,PETSC_CHAR)) return PetscError(
((MPI_Comm)0x44000001),2519,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",5);
} while (0);
2520 if (convRate) PetscValidPointer(convRate, 5)do { if (!convRate) return PetscError(((MPI_Comm)0x44000001),
2520,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",5); if
(!PetscCheckPointer(convRate,PETSC_CHAR)) return PetscError(
((MPI_Comm)0x44000001),2520,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",5);
} while (0);
2521 ierr = PetscObjectGetComm((PetscObject) snes, &comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2521,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2522 ierr = DMGetDS(dm, &ds);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2522,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2523 ierr = DMGetNumFields(dm, &Nf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2523,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2524 ierr = PetscMalloc2(Nf, &exacts, Nf, &ectxs)PetscMallocA(2,PETSC_FALSE,2524,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(Nf)*sizeof(**(&exacts)),(&exacts),(size_t)(
Nf)*sizeof(**(&ectxs)),(&ectxs));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2524,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2525 for (f = 0; f < Nf; ++f) {
2526 ierr = PetscDSGetExactSolution(ds, f, &exacts[f], &ectxs[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2526,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2527 if (exacts[f]) computeSol = PETSC_TRUE;
2528 }
2529 if (computeSol) {ierr = DMProjectFunction(dm, 0.0, exacts, ectxs, INSERT_ALL_VALUES, u);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2529,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2530 ierr = PetscFree2(exacts, ectxs)PetscFreeA(2,2530,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,&(exacts),&(ectxs));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2530,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2531
2532 /* Create and view matrices */
2533 ierr = DMCreateMatrix(dm, &J);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2533,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2534 ierr = PetscDSHasJacobian(ds, &hasJac);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2534,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2535 ierr = PetscDSHasJacobianPreconditioner(ds, &hasPrec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2535,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2536 if (hasJac && hasPrec) {
2537 ierr = DMCreateMatrix(dm, &M);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2537,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2538 ierr = SNESComputeJacobian(snes, u, J, M);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2538,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2539 ierr = PetscObjectSetName((PetscObject) M, "Preconditioning Matrix");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2539,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2540 ierr = PetscObjectSetOptionsPrefix((PetscObject) M, "jacpre_");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2540,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2541 ierr = MatViewFromOptions(M, NULL((void*)0), "-mat_view");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2541,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2542 ierr = MatDestroy(&M);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2542,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2543 } else {
2544 ierr = SNESComputeJacobian(snes, u, J, J);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2544,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2545 }
2546 ierr = PetscObjectSetName((PetscObject) J, "Jacobian");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2546,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2547 ierr = PetscObjectSetOptionsPrefix((PetscObject) J, "jac_");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2547,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2548 ierr = MatViewFromOptions(J, NULL((void*)0), "-mat_view");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2548,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2549 /* Check nullspace */
2550 ierr = MatGetNullSpace(J, &nullspace);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2550,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2551 if (nullspace) {
2552 PetscBool isNull;
2553 ierr = MatNullSpaceTest(nullspace, J, &isNull);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2553,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2554 if (!isNull) SETERRQ(comm, PETSC_ERR_PLIB, "The null space calculated for the system operator is invalid.")return PetscError(comm,2554,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,77,PETSC_ERROR_INITIAL,"The null space calculated for the system operator is invalid."
);
2555 }
2556 ierr = MatNullSpaceDestroy(&nullspace);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2556,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2557 /* Taylor test */
2558 {
2559 PetscRandom rand;
2560 Vec du, uhat, r, rhat, df;
2561 PetscReal h;
2562 PetscReal *es, *hs, *errors;
2563 PetscReal hMax = 1.0, hMin = 1e-6, hMult = 0.1;
2564 PetscInt Nv, v;
2565
2566 /* Choose a perturbation direction */
2567 ierr = PetscRandomCreate(comm, &rand);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2567,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2568 ierr = VecDuplicate(u, &du);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2568,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2569 ierr = VecSetRandom(du, rand); CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2569,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2570 ierr = PetscRandomDestroy(&rand);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2570,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2571 ierr = VecDuplicate(u, &df);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2571,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2572 ierr = MatMult(J, du, df);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2572,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2573 /* Evaluate residual at u, F(u), save in vector r */
2574 ierr = VecDuplicate(u, &r);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2574,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2575 ierr = SNESComputeFunction(snes, u, r);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2575,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2576 /* Look at the convergence of our Taylor approximation as we approach u */
2577 for (h = hMax, Nv = 0; h >= hMin; h *= hMult, ++Nv);
2578 ierr = PetscCalloc3(Nv, &es, Nv, &hs, Nv, &errors)PetscMallocA(3,PETSC_TRUE,2578,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,(size_t)(Nv)*sizeof(**(&es)),(&es),(size_t)(Nv)*sizeof
(**(&hs)),(&hs),(size_t)(Nv)*sizeof(**(&errors)),
(&errors));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2578,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2579 ierr = VecDuplicate(u, &uhat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2579,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2580 ierr = VecDuplicate(u, &rhat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2580,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2581 for (h = hMax, Nv = 0; h >= hMin; h *= hMult, ++Nv) {
2582 ierr = VecWAXPY(uhat, h, du, u);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2582,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2583 /* F(\hat u) \approx F(u) + J(u) (uhat - u) = F(u) + h * J(u) du */
2584 ierr = SNESComputeFunction(snes, uhat, rhat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2584,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2585 ierr = VecAXPBYPCZ(rhat, -1.0, -h, 1.0, r, df);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2585,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2586 ierr = VecNorm(rhat, NORM_2, &errors[Nv]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2586,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2587
2588 es[Nv] = PetscLog10Real(errors[Nv])log10(errors[Nv]);
2589 hs[Nv] = PetscLog10Real(h)log10(h);
2590 }
2591 ierr = VecDestroy(&uhat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2591,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2592 ierr = VecDestroy(&rhat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2592,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2593 ierr = VecDestroy(&df);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2593,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2594 ierr = VecDestroy(&r);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2594,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2595 ierr = VecDestroy(&du);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2595,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2596 for (v = 0; v < Nv; ++v) {
2597 if ((tol >= 0) && (errors[v] > tol)) break;
2598 else if (errors[v] > PETSC_SMALL1.e-10) break;
2599 }
2600 if (v == Nv) isLin = PETSC_TRUE;
2601 ierr = PetscLinearRegression(Nv, hs, es, &slope, &intercept);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2601,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2602 ierr = PetscFree3(es, hs, errors)PetscFreeA(3,2602,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,&(es),&(hs),&(errors));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2602,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2603 /* Slope should be about 2 */
2604 if (tol >= 0) {
2605 if (!isLin && PetscAbsReal(2 - slope)fabs(2 - slope) > tol) SETERRQ1(comm, PETSC_ERR_ARG_WRONG, "Taylor approximation convergence rate should be 2, not %0.2f", (double) slope)return PetscError(comm,2605,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,62,PETSC_ERROR_INITIAL,"Taylor approximation convergence rate should be 2, not %0.2f"
,(double) slope);
2606 } else if (isLinear || convRate) {
2607 if (isLinear) *isLinear = isLin;
2608 if (convRate) *convRate = slope;
2609 } else {
2610 if (!isLin) {ierr = PetscPrintf(comm, "Taylor approximation converging at order %3.2f\n", (double) slope);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2610,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2611 else {ierr = PetscPrintf(comm, "Function appears to be linear\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2611,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
2612 }
2613 }
2614 ierr = MatDestroy(&J);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2614,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2615 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
2616}
2617
2618PetscErrorCode DMSNESCheck_Internal(SNES snes, DM dm, Vec u, PetscErrorCode (**exactFuncs)(PetscInt, PetscReal, const PetscReal x[], PetscInt, PetscScalar *u, void *ctx), void **ctxs)
2619{
2620 PetscErrorCode ierr;
2621
2622 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 2622; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
2623 ierr = DMSNESCheckDiscretization(snes, dm, u, exactFuncs, ctxs, -1.0, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2623,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2624 ierr = DMSNESCheckResidual(snes, dm, u, -1.0, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2624,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2625 ierr = DMSNESCheckJacobian(snes, dm, u, -1.0, NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2625,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2626 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
2627}
2628
2629/*@C
2630 DMSNESCheckFromOptions - Check the residual and Jacobian functions using the exact solution by outputting some diagnostic information
2631
2632 Input Parameters:
2633+ snes - the SNES object
2634. u - representative SNES vector
2635. exactFuncs - pointwise functions of the exact solution for each field
2636- ctxs - contexts for the functions
2637
2638 Level: developer
2639@*/
2640PetscErrorCode DMSNESCheckFromOptions(SNES snes, Vec u, PetscErrorCode (**exactFuncs)(PetscInt dim, PetscReal time, const PetscReal x[], PetscInt Nf, PetscScalar *u, void *ctx), void **ctxs)
2641{
2642 DM dm;
2643 Vec sol;
2644 PetscBool check;
2645 PetscErrorCode ierr;
2646
2647 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c";
petscstack->line[petscstack->currentsize] = 2647; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
2648 ierr = PetscOptionsHasName(((PetscObject)snes)->options,((PetscObject)snes)->prefix, "-dmsnes_check", &check);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2648,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2649 if (!check) PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
2650 ierr = SNESGetDM(snes, &dm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2650,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2651 ierr = VecDuplicate(u, &sol);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2651,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2652 ierr = SNESSetSolution(snes, sol);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2652,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2653 ierr = DMSNESCheck_Internal(snes, dm, sol, exactFuncs, ctxs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2653,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2654 ierr = VecDestroy(&sol);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2654,__func__,"/sandbox/petsc/petsc.master/src/snes/utils/dmplexsnes.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2655 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
2656}