Bug Summary

File:mat/impls/aij/mpi/mpimatmatmult.c
Warning:line 769, column 14
Array access (from variable 'pi_oth') results in a null pointer dereference

Annotated Source Code

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1
2/*
3 Defines matrix-matrix product routines for pairs of MPIAIJ matrices
4 C = A * B
5*/
6#include <../src/mat/impls/aij/seq/aij.h> /*I "petscmat.h" I*/
7#include <../src/mat/utils/freespace.h>
8#include <../src/mat/impls/aij/mpi/mpiaij.h>
9#include <petscbt.h>
10#include <../src/mat/impls/dense/mpi/mpidense.h>
11#include <petsc/private/vecimpl.h>
12#include <petsc/private/vecscatterimpl.h>
13
14#if defined(PETSC_HAVE_HYPRE)
15PETSC_INTERNextern __attribute__((visibility ("hidden"))) PetscErrorCode MatMatMultSymbolic_AIJ_AIJ_wHYPRE(Mat,Mat,PetscReal,Mat*);
16#endif
17
18PETSC_INTERNextern __attribute__((visibility ("hidden"))) PetscErrorCode MatMatMult_MPIAIJ_MPIAIJ(Mat A,Mat B,MatReuse scall,PetscReal fill, Mat *C)
19{
20 PetscErrorCode ierr;
21#if defined(PETSC_HAVE_HYPRE)
22 const char *algTypes[4] = {"scalable","nonscalable","seqmpi","hypre"};
23 PetscInt nalg = 4;
24#else
25 const char *algTypes[3] = {"scalable","nonscalable","seqmpi"};
26 PetscInt nalg = 3;
27#endif
28 PetscInt alg = 1; /* set nonscalable algorithm as default */
29 MPI_Comm comm;
30 PetscBool flg;
31
32 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 32; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
33 if (scall == MAT_INITIAL_MATRIX) {
34 ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),34,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
35 if (A->cmap->rstart != B->rmap->rstart || A->cmap->rend != B->rmap->rend) SETERRQ4(comm,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, (%D, %D) != (%D,%D)",A->cmap->rstart,A->cmap->rend,B->rmap->rstart,B->rmap->rend)return PetscError(comm,35,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,60,PETSC_ERROR_INITIAL,"Matrix local dimensions are incompatible, (%D, %D) != (%D,%D)"
,A->cmap->rstart,A->cmap->rend,B->rmap->rstart
,B->rmap->rend);
36
37 ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"MatMatMult","Mat")0; do { PetscOptionItems PetscOptionsObjectBase; PetscOptionItems
*PetscOptionsObject = &PetscOptionsObjectBase; PetscMemzero
(PetscOptionsObject,sizeof(PetscOptionItems)); for (PetscOptionsObject
->count=(PetscOptionsPublish?-1:1); PetscOptionsObject->
count<2; PetscOptionsObject->count++) { PetscErrorCode _5_ierr
= PetscOptionsBegin_Private(PetscOptionsObject,PetscObjectComm
((PetscObject)A),((PetscObject)A)->prefix,"MatMatMult","Mat"
);do {if (__builtin_expect(!!(_5_ierr),0)) return PetscError(
((MPI_Comm)0x44000001),37,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_5_ierr,PETSC_ERROR_REPEAT," ");} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),37,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
38 ierr = PetscOptionsEList("-matmatmult_via","Algorithmic approach","MatMatMult",algTypes,nalg,algTypes[1],&alg,&flg)PetscOptionsEList_Private(PetscOptionsObject,"-matmatmult_via"
,"Algorithmic approach","MatMatMult",algTypes,nalg,algTypes[1
],&alg,&flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),38,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
39 ierr = PetscOptionsEnd()_5_ierr = PetscOptionsEnd_Private(PetscOptionsObject);do {if (
__builtin_expect(!!(_5_ierr),0)) return PetscError(((MPI_Comm
)0x44000001),39,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_5_ierr,PETSC_ERROR_REPEAT," ");} while (0);}} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),39,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
40
41 if (!flg && B->cmap->N > 100000) { /* may switch to scalable algorithm as default */
42 MatInfo Ainfo,Binfo;
43 PetscInt nz_local;
44 PetscBool alg_scalable_loc=PETSC_FALSE,alg_scalable;
45
46 ierr = MatGetInfo(A,MAT_LOCAL,&Ainfo);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),46,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
47 ierr = MatGetInfo(B,MAT_LOCAL,&Binfo);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),47,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
48 nz_local = (PetscInt)(Ainfo.nz_allocated + Binfo.nz_allocated);
49
50 if (B->cmap->N > fill*nz_local) alg_scalable_loc = PETSC_TRUE;
51 ierr = MPIU_Allreduce(&alg_scalable_loc,&alg_scalable,1,MPIU_BOOL,MPI_LOR,comm)(PetscAllreduceBarrierCheck(comm,1,51,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((petsc_allreduce_ct += PetscMPIParallelComm((comm)),0) ||
MPI_Allreduce((&alg_scalable_loc),(&alg_scalable),(1
),(MPIU_BOOL),((MPI_Op)(0x58000007)),(comm))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),51,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
52
53 if (alg_scalable) {
54 alg = 0; /* scalable algorithm would 50% slower than nonscalable algorithm */
55 ierr = PetscInfo2(B,"Use scalable algorithm, BN %D, fill*nz_allocated %g\n",B->cmap->N,fill*nz_local)PetscInfo_Private(__func__,B,"Use scalable algorithm, BN %D, fill*nz_allocated %g\n"
,B->cmap->N,fill*nz_local);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),55,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
56 }
57 }
58
59 ierr = PetscLogEventBegin(MAT_MatMultSymbolic,A,B,0,0)(((PetscLogPLB && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[MAT_MatMultSymbolic].active) ? (*PetscLogPLB)((MAT_MatMultSymbolic
),0,(PetscObject)(A),(PetscObject)(B),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),59,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
60 switch (alg) {
61 case 1:
62 ierr = MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable(A,B,fill,C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),62,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
63 break;
64 case 2:
65 ierr = MatMatMultSymbolic_MPIAIJ_MPIAIJ_seqMPI(A,B,fill,C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),65,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
66 break;
67#if defined(PETSC_HAVE_HYPRE)
68 case 3:
69 ierr = MatMatMultSymbolic_AIJ_AIJ_wHYPRE(A,B,fill,C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),69,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
70 break;
71#endif
72 default:
73 ierr = MatMatMultSymbolic_MPIAIJ_MPIAIJ(A,B,fill,C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),73,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
74 break;
75 }
76 ierr = PetscLogEventEnd(MAT_MatMultSymbolic,A,B,0,0)(((PetscLogPLE && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[MAT_MatMultSymbolic].active) ? (*PetscLogPLE)((MAT_MatMultSymbolic
),0,(PetscObject)(A),(PetscObject)(B),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),76,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
77
78 if (alg == 0 || alg == 1) {
79 Mat_MPIAIJ *c = (Mat_MPIAIJ*)(*C)->data;
80 Mat_APMPI *ap = c->ap;
81 ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)(*C)),((PetscObject)(*C))->prefix,"MatFreeIntermediateDataStructures","Mat")0; do { PetscOptionItems PetscOptionsObjectBase; PetscOptionItems
*PetscOptionsObject = &PetscOptionsObjectBase; PetscMemzero
(PetscOptionsObject,sizeof(PetscOptionItems)); for (PetscOptionsObject
->count=(PetscOptionsPublish?-1:1); PetscOptionsObject->
count<2; PetscOptionsObject->count++) { PetscErrorCode _5_ierr
= PetscOptionsBegin_Private(PetscOptionsObject,PetscObjectComm
((PetscObject)(*C)),((PetscObject)(*C))->prefix,"MatFreeIntermediateDataStructures"
,"Mat");do {if (__builtin_expect(!!(_5_ierr),0)) return PetscError
(((MPI_Comm)0x44000001),81,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_5_ierr,PETSC_ERROR_REPEAT," ");} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),81,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
82 ap->freestruct = PETSC_FALSE;
83 ierr = PetscOptionsBool("-mat_freeintermediatedatastructures","Free intermediate data structures", "MatFreeIntermediateDataStructures",ap->freestruct,&ap->freestruct, NULL)PetscOptionsBool_Private(PetscOptionsObject,"-mat_freeintermediatedatastructures"
,"Free intermediate data structures","MatFreeIntermediateDataStructures"
,ap->freestruct,&ap->freestruct,((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),83,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
84 ierr = PetscOptionsEnd()_5_ierr = PetscOptionsEnd_Private(PetscOptionsObject);do {if (
__builtin_expect(!!(_5_ierr),0)) return PetscError(((MPI_Comm
)0x44000001),84,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_5_ierr,PETSC_ERROR_REPEAT," ");} while (0);}} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),84,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
85 }
86 }
87
88 ierr = PetscLogEventBegin(MAT_MatMultNumeric,A,B,0,0)(((PetscLogPLB && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[MAT_MatMultNumeric].active) ? (*PetscLogPLB)((MAT_MatMultNumeric
),0,(PetscObject)(A),(PetscObject)(B),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),88,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
89 ierr = (*(*C)->ops->matmultnumeric)(A,B,*C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),89,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
90 ierr = PetscLogEventEnd(MAT_MatMultNumeric,A,B,0,0)(((PetscLogPLE && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[MAT_MatMultNumeric].active) ? (*PetscLogPLE)((MAT_MatMultNumeric
),0,(PetscObject)(A),(PetscObject)(B),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),90,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
91 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
92}
93
94PetscErrorCode MatDestroy_MPIAIJ_MatMatMult(Mat A)
95{
96 PetscErrorCode ierr;
97 Mat_MPIAIJ *a = (Mat_MPIAIJ*)A->data;
98 Mat_APMPI *ptap = a->ap;
99
100 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 100; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
101 ierr = PetscFree2(ptap->startsj_s,ptap->startsj_r)PetscFreeA(2,101,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,&(ptap->startsj_s),&(ptap->startsj_r));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),101,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
102 ierr = PetscFree(ptap->bufa)((*PetscTrFree)((void*)(ptap->bufa),102,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((ptap->bufa) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),102,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
103 ierr = MatDestroy(&ptap->P_loc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),103,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
104 ierr = MatDestroy(&ptap->P_oth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),104,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
105 ierr = MatDestroy(&ptap->Pt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),105,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
106 ierr = PetscFree(ptap->api)((*PetscTrFree)((void*)(ptap->api),106,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((ptap->api) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),106,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
107 ierr = PetscFree(ptap->apj)((*PetscTrFree)((void*)(ptap->apj),107,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((ptap->apj) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),107,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
108 ierr = PetscFree(ptap->apa)((*PetscTrFree)((void*)(ptap->apa),108,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((ptap->apa) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),108,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
109 ierr = ptap->destroy(A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),109,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
110 ierr = PetscFree(ptap)((*PetscTrFree)((void*)(ptap),110,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((ptap) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),110,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
111 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
112}
113
114PetscErrorCode MatMatMultNumeric_MPIAIJ_MPIAIJ_nonscalable(Mat A,Mat P,Mat C)
115{
116 PetscErrorCode ierr;
117 Mat_MPIAIJ *a =(Mat_MPIAIJ*)A->data,*c=(Mat_MPIAIJ*)C->data;
118 Mat_SeqAIJ *ad =(Mat_SeqAIJ*)(a->A)->data,*ao=(Mat_SeqAIJ*)(a->B)->data;
119 Mat_SeqAIJ *cd =(Mat_SeqAIJ*)(c->A)->data,*co=(Mat_SeqAIJ*)(c->B)->data;
120 PetscScalar *cda=cd->a,*coa=co->a;
121 Mat_SeqAIJ *p_loc,*p_oth;
122 PetscScalar *apa,*ca;
123 PetscInt cm =C->rmap->n;
124 Mat_APMPI *ptap=c->ap;
125 PetscInt *api,*apj,*apJ,i,k;
126 PetscInt cstart=C->cmap->rstart;
127 PetscInt cdnz,conz,k0,k1;
128 MPI_Comm comm;
129 PetscMPIInt size;
130
131 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 131; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
132 ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),132,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
133 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),133,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
134
135 if (!ptap->P_oth && size>1) SETERRQ(comm,PETSC_ERR_ARG_WRONGSTATE,"AP cannot be reused. Do not call MatFreeIntermediateDataStructures() or use '-mat_freeintermediatedatastructures'")return PetscError(comm,135,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,73,PETSC_ERROR_INITIAL,"AP cannot be reused. Do not call MatFreeIntermediateDataStructures() or use '-mat_freeintermediatedatastructures'"
);
136
137 /* 1) get P_oth = ptap->P_oth and P_loc = ptap->P_loc */
138 /*-----------------------------------------------------*/
139 /* update numerical values of P_oth and P_loc */
140 ierr = MatGetBrowsOfAoCols_MPIAIJ(A,P,MAT_REUSE_MATRIX,&ptap->startsj_s,&ptap->startsj_r,&ptap->bufa,&ptap->P_oth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),140,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
141 ierr = MatMPIAIJGetLocalMat(P,MAT_REUSE_MATRIX,&ptap->P_loc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),141,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
142
143 /* 2) compute numeric C_loc = A_loc*P = Ad*P_loc + Ao*P_oth */
144 /*----------------------------------------------------------*/
145 /* get data from symbolic products */
146 p_loc = (Mat_SeqAIJ*)(ptap->P_loc)->data;
147 p_oth = NULL((void*)0);
148 if (size >1) {
149 p_oth = (Mat_SeqAIJ*)(ptap->P_oth)->data;
150 }
151
152 /* get apa for storing dense row A[i,:]*P */
153 apa = ptap->apa;
154
155 api = ptap->api;
156 apj = ptap->apj;
157 for (i=0; i<cm; i++) {
158 /* compute apa = A[i,:]*P */
159 AProw_nonscalable(i,ad,ao,p_loc,p_oth,apa){ PetscInt _anz,_pnz,_j,_k,*_ai,*_aj,_row,*_pi,*_pj; PetscScalar
*_aa,_valtmp,*_pa; _ai = ad->i; _anz = _ai[i+1] - _ai[i];
_aj = ad->j + _ai[i]; _aa = ad->a + _ai[i]; for (_j=0;
_j<_anz; _j++) { _row = _aj[_j]; _pi = p_loc->i; _pnz =
_pi[_row+1] - _pi[_row]; _pj = p_loc->j + _pi[_row]; _pa =
p_loc->a + _pi[_row]; _valtmp = _aa[_j]; for (_k=0; _k<
_pnz; _k++) { apa[_pj[_k]] += _valtmp*_pa[_k]; } (void)PetscLogFlops
(2.0*_pnz); } if (p_oth){ _ai = ao->i; _anz = _ai[i+1] - _ai
[i]; _aj = ao->j + _ai[i]; _aa = ao->a + _ai[i]; for (_j
=0; _j<_anz; _j++) { _row = _aj[_j]; _pi = p_oth->i; _pnz
= _pi[_row+1] - _pi[_row]; _pj = p_oth->j + _pi[_row]; _pa
= p_oth->a + _pi[_row]; _valtmp = _aa[_j]; for (_k=0; _k<
_pnz; _k++) { apa[_pj[_k]] += _valtmp*_pa[_k]; } (void)PetscLogFlops
(2.0*_pnz); } }};
160
161 /* set values in C */
162 apJ = apj + api[i];
163 cdnz = cd->i[i+1] - cd->i[i];
164 conz = co->i[i+1] - co->i[i];
165
166 /* 1st off-diagoanl part of C */
167 ca = coa + co->i[i];
168 k = 0;
169 for (k0=0; k0<conz; k0++) {
170 if (apJ[k] >= cstart) break;
171 ca[k0] = apa[apJ[k]];
172 apa[apJ[k++]] = 0.0;
173 }
174
175 /* diagonal part of C */
176 ca = cda + cd->i[i];
177 for (k1=0; k1<cdnz; k1++) {
178 ca[k1] = apa[apJ[k]];
179 apa[apJ[k++]] = 0.0;
180 }
181
182 /* 2nd off-diagoanl part of C */
183 ca = coa + co->i[i];
184 for (; k0<conz; k0++) {
185 ca[k0] = apa[apJ[k]];
186 apa[apJ[k++]] = 0.0;
187 }
188 }
189 ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),189,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
190 ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),190,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
191
192 if (ptap->freestruct) {
193 ierr = MatFreeIntermediateDataStructures(C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),193,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
194 }
195 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
196}
197
198PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable(Mat A,Mat P,PetscReal fill,Mat *C)
199{
200 PetscErrorCode ierr;
201 MPI_Comm comm;
202 PetscMPIInt size;
203 Mat Cmpi;
204 Mat_APMPI *ptap;
205 PetscFreeSpaceList free_space=NULL((void*)0),current_space=NULL((void*)0);
206 Mat_MPIAIJ *a =(Mat_MPIAIJ*)A->data,*c;
207 Mat_SeqAIJ *ad =(Mat_SeqAIJ*)(a->A)->data,*ao=(Mat_SeqAIJ*)(a->B)->data,*p_loc,*p_oth;
208 PetscInt *pi_loc,*pj_loc,*pi_oth,*pj_oth,*dnz,*onz;
209 PetscInt *adi=ad->i,*adj=ad->j,*aoi=ao->i,*aoj=ao->j,rstart=A->rmap->rstart;
210 PetscInt *lnk,i,pnz,row,*api,*apj,*Jptr,apnz,nspacedouble=0,j,nzi;
211 PetscInt am=A->rmap->n,pN=P->cmap->N,pn=P->cmap->n,pm=P->rmap->n;
212 PetscBT lnkbt;
213 PetscReal afill;
214 MatType mtype;
215
216 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 216; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
217 ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),217,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
218 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),218,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
219
220 /* create struct Mat_APMPI and attached it to C later */
221 ierr = PetscNew(&ptap)PetscMallocA(1,PETSC_TRUE,221,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(1)*sizeof(**((&ptap))),((&ptap)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),221,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
222
223 /* get P_oth by taking rows of P (= non-zero cols of local A) from other processors */
224 ierr = MatGetBrowsOfAoCols_MPIAIJ(A,P,MAT_INITIAL_MATRIX,&ptap->startsj_s,&ptap->startsj_r,&ptap->bufa,&ptap->P_oth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),224,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
225
226 /* get P_loc by taking all local rows of P */
227 ierr = MatMPIAIJGetLocalMat(P,MAT_INITIAL_MATRIX,&ptap->P_loc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),227,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
228
229 p_loc = (Mat_SeqAIJ*)(ptap->P_loc)->data;
230 pi_loc = p_loc->i; pj_loc = p_loc->j;
231 if (size > 1) {
232 p_oth = (Mat_SeqAIJ*)(ptap->P_oth)->data;
233 pi_oth = p_oth->i; pj_oth = p_oth->j;
234 } else {
235 p_oth = NULL((void*)0);
236 pi_oth = NULL((void*)0); pj_oth = NULL((void*)0);
237 }
238
239 /* first, compute symbolic AP = A_loc*P = A_diag*P_loc + A_off*P_oth */
240 /*-------------------------------------------------------------------*/
241 ierr = PetscMalloc1(am+2,&api)PetscMallocA(1,PETSC_FALSE,241,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(am+2)*sizeof(**(&api)),(&api));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),241,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
242 ptap->api = api;
243 api[0] = 0;
244
245 /* create and initialize a linked list */
246 ierr = PetscLLCondensedCreate(pN,pN,&lnk,&lnkbt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),246,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
247
248 /* Initial FreeSpace size is fill*(nnz(A)+nnz(P)) */
249 ierr = PetscFreeSpaceGet(PetscRealIntMultTruncate(fill,PetscIntSumTruncate(adi[am],PetscIntSumTruncate(aoi[am],pi_loc[pm]))),&free_space);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),249,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
250 current_space = free_space;
251
252 ierr = MatPreallocateInitialize(comm,am,pn,dnz,onz)0; do { PetscErrorCode _4_ierr; PetscInt __nrows = (am),__ncols
= (pn),__rstart,__start,__end; _4_ierr = PetscMallocA(2,PETSC_TRUE
,252,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)((size_t)__nrows)*sizeof(**(&dnz)),(&dnz),(size_t
)((size_t)__nrows)*sizeof(**(&onz)),(&onz));do {if (__builtin_expect
(!!(_4_ierr),0)) return PetscError(((MPI_Comm)0x44000001),252
,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __start = 0; __end
= __start; _4_ierr = MPI_Scan(&__ncols,&__end,1,((MPI_Datatype
)0x4c000405),(MPI_Op)(0x58000003),comm);do {if (__builtin_expect
(!!(_4_ierr),0)) return PetscError(((MPI_Comm)0x44000001),252
,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __start = __end
- __ncols; _4_ierr = MPI_Scan(&__nrows,&__rstart,1,(
(MPI_Datatype)0x4c000405),(MPI_Op)(0x58000003),comm);do {if (
__builtin_expect(!!(_4_ierr),0)) return PetscError(((MPI_Comm
)0x44000001),252,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __rstart = __rstart
- __nrows; do { } while(0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),252,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
253 for (i=0; i<am; i++) {
254 /* diagonal portion of A */
255 nzi = adi[i+1] - adi[i];
256 for (j=0; j<nzi; j++) {
257 row = *adj++;
258 pnz = pi_loc[row+1] - pi_loc[row];
259 Jptr = pj_loc + pi_loc[row];
260 /* add non-zero cols of P into the sorted linked list lnk */
261 ierr = PetscLLCondensedAddSorted(pnz,Jptr,lnk,lnkbt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),261,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
262 }
263 /* off-diagonal portion of A */
264 nzi = aoi[i+1] - aoi[i];
265 for (j=0; j<nzi; j++) {
266 row = *aoj++;
267 pnz = pi_oth[row+1] - pi_oth[row];
268 Jptr = pj_oth + pi_oth[row];
269 ierr = PetscLLCondensedAddSorted(pnz,Jptr,lnk,lnkbt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),269,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
270 }
271
272 apnz = lnk[0];
273 api[i+1] = api[i] + apnz;
274
275 /* if free space is not available, double the total space in the list */
276 if (current_space->local_remaining<apnz) {
277 ierr = PetscFreeSpaceGet(PetscIntSumTruncate(apnz,current_space->total_array_size),&current_space);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),277,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
278 nspacedouble++;
279 }
280
281 /* Copy data into free space, then initialize lnk */
282 ierr = PetscLLCondensedClean(pN,apnz,current_space->array,lnk,lnkbt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),282,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
283 ierr = MatPreallocateSet(i+rstart,apnz,current_space->array,dnz,onz)0;do { PetscInt __i; if (i+rstart < __rstart) return PetscError
(((MPI_Comm)0x44000001),283,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,63,PETSC_ERROR_INITIAL,"Trying to set preallocation for row %D less than first local row %D"
,i+rstart,__rstart); if (i+rstart >= __rstart+__nrows) return
PetscError(((MPI_Comm)0x44000001),283,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,63,PETSC_ERROR_INITIAL,"Trying to set preallocation for row %D greater than last local row %D"
,i+rstart,__rstart+__nrows-1); for (__i=0; __i<apnz; __i++
) { if ((current_space->array)[__i] < __start || (current_space
->array)[__i] >= __end) onz[i+rstart - __rstart]++; else
if (dnz[i+rstart - __rstart] < __ncols) dnz[i+rstart - __rstart
]++; }} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),283,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
284
285 current_space->array += apnz;
286 current_space->local_used += apnz;
287 current_space->local_remaining -= apnz;
288 }
289
290 /* Allocate space for apj, initialize apj, and */
291 /* destroy list of free space and other temporary array(s) */
292 ierr = PetscMalloc1(api[am]+1,&ptap->apj)PetscMallocA(1,PETSC_FALSE,292,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(api[am]+1)*sizeof(**(&ptap->apj)),(&ptap
->apj));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),292,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
293 apj = ptap->apj;
294 ierr = PetscFreeSpaceContiguous(&free_space,ptap->apj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),294,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
295 ierr = PetscLLDestroy(lnk,lnkbt)(((*PetscTrFree)((void*)(lnk),295,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((lnk) = 0,0)) || PetscBTDestroy(&(lnkbt)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),295,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
296
297 /* malloc apa to store dense row A[i,:]*P */
298 ierr = PetscCalloc1(pN,&ptap->apa)PetscMallocA(1,PETSC_TRUE,298,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(pN)*sizeof(**(&ptap->apa)),(&ptap->apa
));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),298,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
299
300 /* create and assemble symbolic parallel matrix Cmpi */
301 /*----------------------------------------------------*/
302 ierr = MatCreate(comm,&Cmpi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),302,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
303 ierr = MatSetSizes(Cmpi,am,pn,PETSC_DETERMINE-1,PETSC_DETERMINE-1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),303,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
304 ierr = MatSetBlockSizesFromMats(Cmpi,A,P);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),304,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
305
306 ierr = MatGetType(A,&mtype);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),306,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
307 ierr = MatSetType(Cmpi,mtype);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),307,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
308 ierr = MatMPIAIJSetPreallocation(Cmpi,0,dnz,0,onz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),308,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
309
310 ierr = MatSetValues_MPIAIJ_CopyFromCSRFormat_Symbolic(Cmpi, apj, api);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),310,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
311 ierr = MatAssemblyBegin(Cmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),311,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
312 ierr = MatAssemblyEnd(Cmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),312,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
313 ierr = MatPreallocateFinalize(dnz,onz)0;_4_ierr = PetscFreeA(2,313,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,&(dnz),&(onz));do {if (__builtin_expect(!!(_4_ierr),
0)) return PetscError(((MPI_Comm)0x44000001),313,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0);} while(0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),313,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
314
315 ptap->destroy = Cmpi->ops->destroy;
316 ptap->duplicate = Cmpi->ops->duplicate;
317 Cmpi->ops->matmultnumeric = MatMatMultNumeric_MPIAIJ_MPIAIJ_nonscalable;
318 Cmpi->ops->destroy = MatDestroy_MPIAIJ_MatMatMult;
319 Cmpi->ops->freeintermediatedatastructures = MatFreeIntermediateDataStructures_MPIAIJ_AP;
320
321 /* attach the supporting struct to Cmpi for reuse */
322 c = (Mat_MPIAIJ*)Cmpi->data;
323 c->ap = ptap;
324
325 *C = Cmpi;
326
327 /* set MatInfo */
328 afill = (PetscReal)api[am]/(adi[am]+aoi[am]+pi_loc[pm]+1) + 1.e-5;
329 if (afill < 1.0) afill = 1.0;
330 Cmpi->info.mallocs = nspacedouble;
331 Cmpi->info.fill_ratio_given = fill;
332 Cmpi->info.fill_ratio_needed = afill;
333
334#if defined(PETSC_USE_INFO1)
335 if (api[am]) {
336 ierr = PetscInfo3(Cmpi,"Reallocs %D; Fill ratio: given %g needed %g.\n",nspacedouble,(double)fill,(double)afill)PetscInfo_Private(__func__,Cmpi,"Reallocs %D; Fill ratio: given %g needed %g.\n"
,nspacedouble,(double)fill,(double)afill);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),336,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
337 ierr = PetscInfo1(Cmpi,"Use MatMatMult(A,B,MatReuse,%g,&C) for best performance.;\n",(double)afill)PetscInfo_Private(__func__,Cmpi,"Use MatMatMult(A,B,MatReuse,%g,&C) for best performance.;\n"
,(double)afill);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),337,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
338 } else {
339 ierr = PetscInfo(Cmpi,"Empty matrix product\n")PetscInfo_Private(__func__,Cmpi,"Empty matrix product\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),339,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
340 }
341#endif
342 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
343}
344
345PETSC_INTERNextern __attribute__((visibility ("hidden"))) PetscErrorCode MatMatMult_MPIAIJ_MPIDense(Mat A,Mat B,MatReuse scall,PetscReal fill,Mat *C)
346{
347 PetscErrorCode ierr;
348
349 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 349; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
350 if (scall == MAT_INITIAL_MATRIX) {
351 ierr = PetscLogEventBegin(MAT_MatMultSymbolic,A,B,0,0)(((PetscLogPLB && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[MAT_MatMultSymbolic].active) ? (*PetscLogPLB)((MAT_MatMultSymbolic
),0,(PetscObject)(A),(PetscObject)(B),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),351,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
352 ierr = MatMatMultSymbolic_MPIAIJ_MPIDense(A,B,fill,C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),352,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
353 ierr = PetscLogEventEnd(MAT_MatMultSymbolic,A,B,0,0)(((PetscLogPLE && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[MAT_MatMultSymbolic].active) ? (*PetscLogPLE)((MAT_MatMultSymbolic
),0,(PetscObject)(A),(PetscObject)(B),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),353,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
354 }
355 ierr = PetscLogEventBegin(MAT_MatMultNumeric,A,B,0,0)(((PetscLogPLB && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[MAT_MatMultNumeric].active) ? (*PetscLogPLB)((MAT_MatMultNumeric
),0,(PetscObject)(A),(PetscObject)(B),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),355,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
356 ierr = MatMatMultNumeric_MPIAIJ_MPIDense(A,B,*C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),356,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
357 ierr = PetscLogEventEnd(MAT_MatMultNumeric,A,B,0,0)(((PetscLogPLE && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[MAT_MatMultNumeric].active) ? (*PetscLogPLE)((MAT_MatMultNumeric
),0,(PetscObject)(A),(PetscObject)(B),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),357,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
358 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
359}
360
361typedef struct {
362 Mat workB;
363 PetscScalar *rvalues,*svalues;
364 MPI_Request *rwaits,*swaits;
365} MPIAIJ_MPIDense;
366
367PetscErrorCode MatMPIAIJ_MPIDenseDestroy(void *ctx)
368{
369 MPIAIJ_MPIDense *contents = (MPIAIJ_MPIDense*) ctx;
370 PetscErrorCode ierr;
371
372 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 372; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
373 ierr = MatDestroy(&contents->workB);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),373,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
374 ierr = PetscFree4(contents->rvalues,contents->svalues,contents->rwaits,contents->swaits)PetscFreeA(4,374,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,&(contents->rvalues),&(contents->svalues),&
(contents->rwaits),&(contents->swaits));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),374,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
375 ierr = PetscFree(contents)((*PetscTrFree)((void*)(contents),375,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((contents) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),375,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
376 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
377}
378
379/*
380 This is a "dummy function" that handles the case where matrix C was created as a dense matrix
381 directly by the user and passed to MatMatMult() with the MAT_REUSE_MATRIX option
382
383 It is the same as MatMatMultSymbolic_MPIAIJ_MPIDense() except does not create C
384*/
385PetscErrorCode MatMatMultNumeric_MPIDense(Mat A,Mat B,Mat C)
386{
387 PetscErrorCode ierr;
388 PetscBool flg;
389 Mat_MPIAIJ *aij = (Mat_MPIAIJ*) A->data;
390 PetscInt nz = aij->B->cmap->n,to_n,to_entries,from_n,from_entries;
391 PetscContainer container;
392 MPIAIJ_MPIDense *contents;
393 VecScatter ctx = aij->Mvctx;
394
395 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 395; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
396 ierr = PetscObjectTypeCompare((PetscObject)B,MATMPIDENSE"mpidense",&flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),396,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
397 if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Second matrix must be mpidense")return PetscError(((MPI_Comm)0x44000001),397,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,62,PETSC_ERROR_INITIAL,"Second matrix must be mpidense");
398
399 /* Handle case where where user provided the final C matrix rather than calling MatMatMult() with MAT_INITIAL_MATRIX*/
400 ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ"mpiaij",&flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),400,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
401 if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"First matrix must be MPIAIJ")return PetscError(((MPI_Comm)0x44000001),401,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,62,PETSC_ERROR_INITIAL,"First matrix must be MPIAIJ");
402
403 C->ops->matmultnumeric = MatMatMultNumeric_MPIAIJ_MPIDense;
404
405 ierr = PetscNew(&contents)PetscMallocA(1,PETSC_TRUE,405,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(1)*sizeof(**((&contents))),((&contents)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),405,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
406 /* Create work matrix used to store off processor rows of B needed for local product */
407 ierr = MatCreateSeqDense(PETSC_COMM_SELF((MPI_Comm)0x44000001),nz,B->cmap->N,NULL((void*)0),&contents->workB);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),407,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
408 /* Create work arrays needed */
409 ierr = VecScatterGetRemoteCount_Private(ctx,PETSC_TRUE/*send*/,&to_n,&to_entries);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),409,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
410 ierr = VecScatterGetRemoteCount_Private(ctx,PETSC_FALSE/*recv*/,&from_n,&from_entries);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),410,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
411 ierr = PetscMalloc4(B->cmap->N*from_entries,&contents->rvalues,B->cmap->N*to_entries,&contents->svalues,from_n,&contents->rwaits,to_n,&contents->swaits)PetscMallocA(4,PETSC_FALSE,411,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(B->cmap->N*from_entries)*sizeof(**(&contents
->rvalues)),(&contents->rvalues),(size_t)(B->cmap
->N*to_entries)*sizeof(**(&contents->svalues)),(&
contents->svalues),(size_t)(from_n)*sizeof(**(&contents
->rwaits)),(&contents->rwaits),(size_t)(to_n)*sizeof
(**(&contents->swaits)),(&contents->swaits));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),411,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
412
413 ierr = PetscContainerCreate(PetscObjectComm((PetscObject)A),&container);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),413,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
414 ierr = PetscContainerSetPointer(container,contents);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),414,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
415 ierr = PetscContainerSetUserDestroy(container,MatMPIAIJ_MPIDenseDestroy);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),415,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
416 ierr = PetscObjectCompose((PetscObject)C,"workB",(PetscObject)container);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),416,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
417 ierr = PetscContainerDestroy(&container);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),417,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
418
419 ierr = (*C->ops->matmultnumeric)(A,B,C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),419,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
420 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
421}
422
423PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIDense(Mat A,Mat B,PetscReal fill,Mat *C)
424{
425 PetscErrorCode ierr;
426 Mat_MPIAIJ *aij = (Mat_MPIAIJ*) A->data;
427 PetscInt nz = aij->B->cmap->n,to_n,to_entries,from_n,from_entries;
428 PetscContainer container;
429 MPIAIJ_MPIDense *contents;
430 VecScatter ctx = aij->Mvctx;
431 PetscInt m = A->rmap->n,n=B->cmap->n;
432
433 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 433; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
434 ierr = MatCreate(PetscObjectComm((PetscObject)B),C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),434,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
435 ierr = MatSetSizes(*C,m,n,A->rmap->N,B->cmap->N);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),435,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
436 ierr = MatSetBlockSizesFromMats(*C,A,B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),436,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
437 ierr = MatSetType(*C,MATMPIDENSE"mpidense");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),437,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
438 ierr = MatMPIDenseSetPreallocation(*C,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),438,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
439 ierr = MatAssemblyBegin(*C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),439,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
440 ierr = MatAssemblyEnd(*C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),440,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
441
442 (*C)->ops->matmultnumeric = MatMatMultNumeric_MPIAIJ_MPIDense;
443
444 ierr = PetscNew(&contents)PetscMallocA(1,PETSC_TRUE,444,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(1)*sizeof(**((&contents))),((&contents)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),444,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
445 /* Create work matrix used to store off processor rows of B needed for local product */
446 ierr = MatCreateSeqDense(PETSC_COMM_SELF((MPI_Comm)0x44000001),nz,B->cmap->N,NULL((void*)0),&contents->workB);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),446,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
447 /* Create work arrays needed */
448 ierr = VecScatterGetRemoteCount_Private(ctx,PETSC_TRUE/*send*/,&to_n,&to_entries);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),448,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
449 ierr = VecScatterGetRemoteCount_Private(ctx,PETSC_FALSE/*recv*/,&from_n,&from_entries);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),449,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
450 ierr = PetscMalloc4(B->cmap->N*from_entries,&contents->rvalues,B->cmap->N*to_entries,&contents->svalues,from_n,&contents->rwaits,to_n,&contents->swaits)PetscMallocA(4,PETSC_FALSE,450,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(B->cmap->N*from_entries)*sizeof(**(&contents
->rvalues)),(&contents->rvalues),(size_t)(B->cmap
->N*to_entries)*sizeof(**(&contents->svalues)),(&
contents->svalues),(size_t)(from_n)*sizeof(**(&contents
->rwaits)),(&contents->rwaits),(size_t)(to_n)*sizeof
(**(&contents->swaits)),(&contents->swaits));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),450,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
451
452 ierr = PetscContainerCreate(PetscObjectComm((PetscObject)A),&container);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),452,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
453 ierr = PetscContainerSetPointer(container,contents);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),453,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
454 ierr = PetscContainerSetUserDestroy(container,MatMPIAIJ_MPIDenseDestroy);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),454,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
455 ierr = PetscObjectCompose((PetscObject)(*C),"workB",(PetscObject)container);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),455,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
456 ierr = PetscContainerDestroy(&container);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),456,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
457 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
458}
459
460/*
461 Performs an efficient scatter on the rows of B needed by this process; this is
462 a modification of the VecScatterBegin_() routines.
463*/
464PetscErrorCode MatMPIDenseScatter(Mat A,Mat B,Mat C,Mat *outworkB)
465{
466 Mat_MPIAIJ *aij = (Mat_MPIAIJ*)A->data;
467 PetscErrorCode ierr;
468 const PetscScalar *b;
469 PetscScalar *w,*svalues,*rvalues;
470 VecScatter ctx = aij->Mvctx;
471 PetscInt i,j,k;
472 const PetscInt *sindices,*sstarts,*rindices,*rstarts;
473 const PetscMPIInt *sprocs,*rprocs;
474 PetscInt nsends,nrecvs,nrecvs2;
475 MPI_Request *swaits,*rwaits;
476 MPI_Comm comm;
477 PetscMPIInt tag = ((PetscObject)ctx)->tag,ncols = B->cmap->N, nrows = aij->B->cmap->n,imdex,nrowsB = B->rmap->n,nsends_mpi,nrecvs_mpi;
478 MPI_Status status;
479 MPIAIJ_MPIDense *contents;
480 PetscContainer container;
481 Mat workB;
482
483 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 483; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
484 ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),484,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
485 ierr = PetscObjectQuery((PetscObject)C,"workB",(PetscObject*)&container);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),485,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
486 if (!container) SETERRQ(comm,PETSC_ERR_PLIB,"Container does not exist")return PetscError(comm,486,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,77,PETSC_ERROR_INITIAL,"Container does not exist");
487 ierr = PetscContainerGetPointer(container,(void**)&contents);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),487,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
488
489 workB = *outworkB = contents->workB;
490 if (nrows != workB->rmap->n) SETERRQ2(comm,PETSC_ERR_PLIB,"Number of rows of workB %D not equal to columns of aij->B %D",nrows,workB->cmap->n)return PetscError(comm,490,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,77,PETSC_ERROR_INITIAL,"Number of rows of workB %D not equal to columns of aij->B %D"
,nrows,workB->cmap->n);
491 ierr = VecScatterGetRemote_Private(ctx,PETSC_TRUE/*send*/,&nsends,&sstarts,&sindices,&sprocs,NULL((void*)0)/*bs*/);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),491,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
492 ierr = VecScatterGetRemoteOrdered_Private(ctx,PETSC_FALSE/*recv*/,&nrecvs,&rstarts,&rindices,&rprocs,NULL((void*)0)/*bs*/);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),492,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
493 ierr = PetscMPIIntCast(nsends,&nsends_mpi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),493,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
494 ierr = PetscMPIIntCast(nrecvs,&nrecvs_mpi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),494,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
495 svalues = contents->svalues;
496 rvalues = contents->rvalues;
497 swaits = contents->swaits;
498 rwaits = contents->rwaits;
499
500 ierr = MatDenseGetArrayRead(B,&b);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),500,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
501 ierr = MatDenseGetArray(workB,&w);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),501,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
502
503 for (i=0; i<nrecvs; i++) {
504 ierr = MPI_Irecv(rvalues+ncols*(rstarts[i]-rstarts[0]),ncols*(rstarts[i+1]-rstarts[i]),MPIU_SCALAR,rprocs[i],tag,comm,rwaits+i)((petsc_irecv_ct++,0) || PetscMPITypeSize(&(petsc_irecv_len
),(ncols*(rstarts[i+1]-rstarts[i])),(((MPI_Datatype)0x4c00080b
))) || MPI_Irecv((rvalues+ncols*(rstarts[i]-rstarts[0])),(ncols
*(rstarts[i+1]-rstarts[i])),(((MPI_Datatype)0x4c00080b)),(rprocs
[i]),(tag),(comm),(rwaits+i)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),504,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
505 }
506
507 for (i=0; i<nsends; i++) {
508 /* pack a message at a time */
509 for (j=0; j<sstarts[i+1]-sstarts[i]; j++) {
510 for (k=0; k<ncols; k++) {
511 svalues[ncols*(sstarts[i]-sstarts[0]+j) + k] = b[sindices[sstarts[i]+j] + nrowsB*k];
512 }
513 }
514 ierr = MPI_Isend(svalues+ncols*(sstarts[i]-sstarts[0]),ncols*(sstarts[i+1]-sstarts[i]),MPIU_SCALAR,sprocs[i],tag,comm,swaits+i)((petsc_isend_ct++,0) || PetscMPITypeSize(&(petsc_isend_len
),(ncols*(sstarts[i+1]-sstarts[i])),(((MPI_Datatype)0x4c00080b
))) || MPI_Isend((svalues+ncols*(sstarts[i]-sstarts[0])),(ncols
*(sstarts[i+1]-sstarts[i])),(((MPI_Datatype)0x4c00080b)),(sprocs
[i]),(tag),(comm),(swaits+i)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),514,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
515 }
516
517 nrecvs2 = nrecvs;
518 while (nrecvs2) {
519 ierr = MPI_Waitany(nrecvs_mpi,rwaits,&imdex,&status)((petsc_wait_any_ct++,petsc_sum_of_waits_ct++,0) || MPI_Waitany
((nrecvs_mpi),(rwaits),(&imdex),(&status)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),519,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
520 nrecvs2--;
521 /* unpack a message at a time */
522 for (j=0; j<rstarts[imdex+1]-rstarts[imdex]; j++) {
523 for (k=0; k<ncols; k++) {
524 w[rindices[rstarts[imdex]+j] + nrows*k] = rvalues[ncols*(rstarts[imdex]-rstarts[0]+j) + k];
525 }
526 }
527 }
528 if (nsends) {ierr = MPI_Waitall(nsends_mpi,swaits,MPI_STATUSES_IGNORE)((petsc_wait_all_ct++,petsc_sum_of_waits_ct += (PetscLogDouble
) (nsends_mpi),0) || MPI_Waitall((nsends_mpi),(swaits),((MPI_Status
*)1)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),528,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
529
530 ierr = VecScatterRestoreRemote_Private(ctx,PETSC_TRUE/*send*/,&nsends,&sstarts,&sindices,&sprocs,NULL((void*)0)/*bs*/);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),530,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
531 ierr = VecScatterRestoreRemoteOrdered_Private(ctx,PETSC_FALSE/*recv*/,&nrecvs,&rstarts,&rindices,&rprocs,NULL((void*)0)/*bs*/);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),531,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
532 ierr = MatDenseRestoreArrayRead(B,&b);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),532,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
533 ierr = MatDenseRestoreArray(workB,&w);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),533,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
534 ierr = MatAssemblyBegin(workB,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),534,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
535 ierr = MatAssemblyEnd(workB,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),535,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
536 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
537
538}
539extern PetscErrorCode MatMatMultNumericAdd_SeqAIJ_SeqDense(Mat,Mat,Mat);
540
541PetscErrorCode MatMatMultNumeric_MPIAIJ_MPIDense(Mat A,Mat B,Mat C)
542{
543 PetscErrorCode ierr;
544 Mat_MPIAIJ *aij = (Mat_MPIAIJ*)A->data;
545 Mat_MPIDense *bdense = (Mat_MPIDense*)B->data;
546 Mat_MPIDense *cdense = (Mat_MPIDense*)C->data;
547 Mat workB;
548
549 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 549; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
550 /* diagonal block of A times all local rows of B*/
551 ierr = MatMatMultNumeric_SeqAIJ_SeqDense(aij->A,bdense->A,cdense->A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),551,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
552
553 /* get off processor parts of B needed to complete the product */
554 ierr = MatMPIDenseScatter(A,B,C,&workB);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),554,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
555
556 /* off-diagonal block of A times nonlocal rows of B */
557 ierr = MatMatMultNumericAdd_SeqAIJ_SeqDense(aij->B,workB,cdense->A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),557,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
558 ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),558,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
559 ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),559,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
560 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
561}
562
563PetscErrorCode MatMatMultNumeric_MPIAIJ_MPIAIJ(Mat A,Mat P,Mat C)
564{
565 PetscErrorCode ierr;
566 Mat_MPIAIJ *a = (Mat_MPIAIJ*)A->data,*c=(Mat_MPIAIJ*)C->data;
567 Mat_SeqAIJ *ad = (Mat_SeqAIJ*)(a->A)->data,*ao=(Mat_SeqAIJ*)(a->B)->data;
568 Mat_SeqAIJ *cd = (Mat_SeqAIJ*)(c->A)->data,*co=(Mat_SeqAIJ*)(c->B)->data;
569 PetscInt *adi = ad->i,*adj,*aoi=ao->i,*aoj;
570 PetscScalar *ada,*aoa,*cda=cd->a,*coa=co->a;
571 Mat_SeqAIJ *p_loc,*p_oth;
572 PetscInt *pi_loc,*pj_loc,*pi_oth,*pj_oth,*pj;
573 PetscScalar *pa_loc,*pa_oth,*pa,valtmp,*ca;
574 PetscInt cm = C->rmap->n,anz,pnz;
575 Mat_APMPI *ptap = c->ap;
576 PetscScalar *apa_sparse;
577 PetscInt *api,*apj,*apJ,i,j,k,row;
578 PetscInt cstart = C->cmap->rstart;
579 PetscInt cdnz,conz,k0,k1,nextp;
580 MPI_Comm comm;
581 PetscMPIInt size;
582
583 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 583; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
584 ierr = PetscObjectGetComm((PetscObject)C,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),584,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
585 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),585,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
586
587 if (!ptap->P_oth && size>1) {
588 SETERRQ(comm,PETSC_ERR_ARG_WRONGSTATE,"AP cannot be reused. Do not call MatFreeIntermediateDataStructures() or use '-mat_freeintermediatedatastructures'")return PetscError(comm,588,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,73,PETSC_ERROR_INITIAL,"AP cannot be reused. Do not call MatFreeIntermediateDataStructures() or use '-mat_freeintermediatedatastructures'"
);
589 }
590 apa_sparse = ptap->apa;
591
592 /* 1) get P_oth = ptap->P_oth and P_loc = ptap->P_loc */
593 /*-----------------------------------------------------*/
594 /* update numerical values of P_oth and P_loc */
595 ierr = MatGetBrowsOfAoCols_MPIAIJ(A,P,MAT_REUSE_MATRIX,&ptap->startsj_s,&ptap->startsj_r,&ptap->bufa,&ptap->P_oth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),595,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
596 ierr = MatMPIAIJGetLocalMat(P,MAT_REUSE_MATRIX,&ptap->P_loc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),596,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
597
598 /* 2) compute numeric C_loc = A_loc*P = Ad*P_loc + Ao*P_oth */
599 /*----------------------------------------------------------*/
600 /* get data from symbolic products */
601 p_loc = (Mat_SeqAIJ*)(ptap->P_loc)->data;
602 pi_loc = p_loc->i; pj_loc = p_loc->j; pa_loc = p_loc->a;
603 if (size >1) {
604 p_oth = (Mat_SeqAIJ*)(ptap->P_oth)->data;
605 pi_oth = p_oth->i; pj_oth = p_oth->j; pa_oth = p_oth->a;
606 } else {
607 p_oth = NULL((void*)0); pi_oth = NULL((void*)0); pj_oth = NULL((void*)0); pa_oth = NULL((void*)0);
608 }
609
610 api = ptap->api;
611 apj = ptap->apj;
612 for (i=0; i<cm; i++) {
613 apJ = apj + api[i];
614
615 /* diagonal portion of A */
616 anz = adi[i+1] - adi[i];
617 adj = ad->j + adi[i];
618 ada = ad->a + adi[i];
619 for (j=0; j<anz; j++) {
620 row = adj[j];
621 pnz = pi_loc[row+1] - pi_loc[row];
622 pj = pj_loc + pi_loc[row];
623 pa = pa_loc + pi_loc[row];
624 /* perform sparse axpy */
625 valtmp = ada[j];
626 nextp = 0;
627 for (k=0; nextp<pnz; k++) {
628 if (apJ[k] == pj[nextp]) { /* column of AP == column of P */
629 apa_sparse[k] += valtmp*pa[nextp++];
630 }
631 }
632 ierr = PetscLogFlops(2.0*pnz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),632,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
633 }
634
635 /* off-diagonal portion of A */
636 anz = aoi[i+1] - aoi[i];
637 aoj = ao->j + aoi[i];
638 aoa = ao->a + aoi[i];
639 for (j=0; j<anz; j++) {
640 row = aoj[j];
641 pnz = pi_oth[row+1] - pi_oth[row];
642 pj = pj_oth + pi_oth[row];
643 pa = pa_oth + pi_oth[row];
644 /* perform sparse axpy */
645 valtmp = aoa[j];
646 nextp = 0;
647 for (k=0; nextp<pnz; k++) {
648 if (apJ[k] == pj[nextp]) { /* column of AP == column of P */
649 apa_sparse[k] += valtmp*pa[nextp++];
650 }
651 }
652 ierr = PetscLogFlops(2.0*pnz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),652,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
653 }
654
655 /* set values in C */
656 cdnz = cd->i[i+1] - cd->i[i];
657 conz = co->i[i+1] - co->i[i];
658
659 /* 1st off-diagoanl part of C */
660 ca = coa + co->i[i];
661 k = 0;
662 for (k0=0; k0<conz; k0++) {
663 if (apJ[k] >= cstart) break;
664 ca[k0] = apa_sparse[k];
665 apa_sparse[k] = 0.0;
666 k++;
667 }
668
669 /* diagonal part of C */
670 ca = cda + cd->i[i];
671 for (k1=0; k1<cdnz; k1++) {
672 ca[k1] = apa_sparse[k];
673 apa_sparse[k] = 0.0;
674 k++;
675 }
676
677 /* 2nd off-diagoanl part of C */
678 ca = coa + co->i[i];
679 for (; k0<conz; k0++) {
680 ca[k0] = apa_sparse[k];
681 apa_sparse[k] = 0.0;
682 k++;
683 }
684 }
685 ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),685,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
686 ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),686,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
687
688 if (ptap->freestruct) {
689 ierr = MatFreeIntermediateDataStructures(C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),689,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
690 }
691 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
692}
693
694/* same as MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable(), except using LLCondensed to avoid O(BN) memory requirement */
695PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIAIJ(Mat A,Mat P,PetscReal fill,Mat *C)
696{
697 PetscErrorCode ierr;
698 MPI_Comm comm;
699 PetscMPIInt size;
700 Mat Cmpi;
701 Mat_APMPI *ptap;
702 PetscFreeSpaceList free_space = NULL((void*)0),current_space=NULL((void*)0);
703 Mat_MPIAIJ *a = (Mat_MPIAIJ*)A->data,*c;
704 Mat_SeqAIJ *ad = (Mat_SeqAIJ*)(a->A)->data,*ao=(Mat_SeqAIJ*)(a->B)->data,*p_loc,*p_oth;
705 PetscInt *pi_loc,*pj_loc,*pi_oth,*pj_oth,*dnz,*onz;
706 PetscInt *adi=ad->i,*adj=ad->j,*aoi=ao->i,*aoj=ao->j,rstart=A->rmap->rstart;
707 PetscInt i,pnz,row,*api,*apj,*Jptr,apnz,nspacedouble=0,j,nzi,*lnk,apnz_max=0;
708 PetscInt am=A->rmap->n,pn=P->cmap->n,pm=P->rmap->n,lsize=pn+20;
709 PetscReal afill;
710 MatType mtype;
711
712 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 712; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
713 ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),713,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
714 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),714,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
715
716 /* create struct Mat_APMPI and attached it to C later */
717 ierr = PetscNew(&ptap)PetscMallocA(1,PETSC_TRUE,717,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(1)*sizeof(**((&ptap))),((&ptap)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),717,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
718
719 /* get P_oth by taking rows of P (= non-zero cols of local A) from other processors */
720 ierr = MatGetBrowsOfAoCols_MPIAIJ(A,P,MAT_INITIAL_MATRIX,&ptap->startsj_s,&ptap->startsj_r,&ptap->bufa,&ptap->P_oth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),720,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
721
722 /* get P_loc by taking all local rows of P */
723 ierr = MatMPIAIJGetLocalMat(P,MAT_INITIAL_MATRIX,&ptap->P_loc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),723,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
724
725 p_loc = (Mat_SeqAIJ*)(ptap->P_loc)->data;
726 pi_loc = p_loc->i; pj_loc = p_loc->j;
727 if (size > 1) {
1
Assuming 'size' is <= 1
→
2
←
Taking false branch
→
728 p_oth = (Mat_SeqAIJ*)(ptap->P_oth)->data;
729 pi_oth = p_oth->i; pj_oth = p_oth->j;
730 } else {
731 p_oth = NULL((void*)0);
732 pi_oth = NULL((void*)0); pj_oth = NULL((void*)0);
3
←
Null pointer value stored to 'pi_oth'
→
733 }
734
735 /* first, compute symbolic AP = A_loc*P = A_diag*P_loc + A_off*P_oth */
736 /*-------------------------------------------------------------------*/
737 ierr = PetscMalloc1(am+2,&api)PetscMallocA(1,PETSC_FALSE,737,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(am+2)*sizeof(**(&api)),(&api));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),737,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
738 ptap->api = api;
739 api[0] = 0;
740
741 ierr = PetscLLCondensedCreate_Scalable(lsize,&lnk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),741,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
742
743 /* Initial FreeSpace size is fill*(nnz(A)+nnz(P)) */
744 ierr = PetscFreeSpaceGet(PetscRealIntMultTruncate(fill,PetscIntSumTruncate(adi[am],PetscIntSumTruncate(aoi[am],pi_loc[pm]))),&free_space);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),744,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
745 current_space = free_space;
746 ierr = MatPreallocateInitialize(comm,am,pn,dnz,onz)0; do { PetscErrorCode _4_ierr; PetscInt __nrows = (am),__ncols
= (pn),__rstart,__start,__end; _4_ierr = PetscMallocA(2,PETSC_TRUE
,746,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)((size_t)__nrows)*sizeof(**(&dnz)),(&dnz),(size_t
)((size_t)__nrows)*sizeof(**(&onz)),(&onz));do {if (__builtin_expect
(!!(_4_ierr),0)) return PetscError(((MPI_Comm)0x44000001),746
,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __start = 0; __end
= __start; _4_ierr = MPI_Scan(&__ncols,&__end,1,((MPI_Datatype
)0x4c000405),(MPI_Op)(0x58000003),comm);do {if (__builtin_expect
(!!(_4_ierr),0)) return PetscError(((MPI_Comm)0x44000001),746
,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __start = __end
- __ncols; _4_ierr = MPI_Scan(&__nrows,&__rstart,1,(
(MPI_Datatype)0x4c000405),(MPI_Op)(0x58000003),comm);do {if (
__builtin_expect(!!(_4_ierr),0)) return PetscError(((MPI_Comm
)0x44000001),746,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __rstart = __rstart
- __nrows; do { } while(0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),746,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
747 for (i=0; i<am; i++) {
4
←
Assuming 'i' is < 'am'
→
5
←
Loop condition is true. Entering loop body
→
13
←
Assuming 'i' is < 'am'
→
14
←
Loop condition is true. Entering loop body
→
748 /* diagonal portion of A */
749 nzi = adi[i+1] - adi[i];
750 for (j=0; j<nzi; j++) {
6
←
Assuming 'j' is >= 'nzi'
→
7
←
Loop condition is false. Execution continues on line 766
→
15
←
Assuming 'j' is >= 'nzi'
→
16
←
Loop condition is false. Execution continues on line 766
→
751 row = *adj++;
752 pnz = pi_loc[row+1] - pi_loc[row];
753 Jptr = pj_loc + pi_loc[row];
754 /* Expand list if it is not long enough */
755 if (pnz+apnz_max > lsize) {
756 lsize = pnz+apnz_max;
757 ierr = PetscLLCondensedExpand_Scalable(lsize, &lnk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),757,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
758 }
759 /* add non-zero cols of P into the sorted linked list lnk */
760 ierr = PetscLLCondensedAddSorted_Scalable(pnz,Jptr,lnk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),760,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
761 apnz = *lnk; /* The first element in the list is the number of items in the list */
762 api[i+1] = api[i] + apnz;
763 if (apnz > apnz_max) apnz_max = apnz;
764 }
765 /* off-diagonal portion of A */
766 nzi = aoi[i+1] - aoi[i];
767 for (j=0; j<nzi; j++) {
8
←
Assuming 'j' is >= 'nzi'
→
9
←
Loop condition is false. Execution continues on line 782
→
17
←
Assuming 'j' is < 'nzi'
→
18
←
Loop condition is true. Entering loop body
→
768 row = *aoj++;
769 pnz = pi_oth[row+1] - pi_oth[row];
19
←
Array access (from variable 'pi_oth') results in a null pointer dereference
770 Jptr = pj_oth + pi_oth[row];
771 /* Expand list if it is not long enough */
772 if (pnz+apnz_max > lsize) {
773 lsize = pnz + apnz_max;
774 ierr = PetscLLCondensedExpand_Scalable(lsize, &lnk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),774,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
775 }
776 /* add non-zero cols of P into the sorted linked list lnk */
777 ierr = PetscLLCondensedAddSorted_Scalable(pnz,Jptr,lnk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),777,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
778 apnz = *lnk; /* The first element in the list is the number of items in the list */
779 api[i+1] = api[i] + apnz;
780 if (apnz > apnz_max) apnz_max = apnz;
781 }
782 apnz = *lnk;
783 api[i+1] = api[i] + apnz;
784 if (apnz > apnz_max) apnz_max = apnz;
10
←
Taking false branch
→
785
786 /* if free space is not available, double the total space in the list */
787 if (current_space->local_remaining<apnz) {
11
←
Assuming the condition is false
→
12
←
Taking false branch
→
788 ierr = PetscFreeSpaceGet(PetscIntSumTruncate(apnz,current_space->total_array_size),&current_space);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),788,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
789 nspacedouble++;
790 }
791
792 /* Copy data into free space, then initialize lnk */
793 ierr = PetscLLCondensedClean_Scalable(apnz,current_space->array,lnk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),793,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
794 ierr = MatPreallocateSet(i+rstart,apnz,current_space->array,dnz,onz)0;do { PetscInt __i; if (i+rstart < __rstart) return PetscError
(((MPI_Comm)0x44000001),794,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,63,PETSC_ERROR_INITIAL,"Trying to set preallocation for row %D less than first local row %D"
,i+rstart,__rstart); if (i+rstart >= __rstart+__nrows) return
PetscError(((MPI_Comm)0x44000001),794,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,63,PETSC_ERROR_INITIAL,"Trying to set preallocation for row %D greater than last local row %D"
,i+rstart,__rstart+__nrows-1); for (__i=0; __i<apnz; __i++
) { if ((current_space->array)[__i] < __start || (current_space
->array)[__i] >= __end) onz[i+rstart - __rstart]++; else
if (dnz[i+rstart - __rstart] < __ncols) dnz[i+rstart - __rstart
]++; }} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),794,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
795
796 current_space->array += apnz;
797 current_space->local_used += apnz;
798 current_space->local_remaining -= apnz;
799 }
800
801 /* Allocate space for apj, initialize apj, and */
802 /* destroy list of free space and other temporary array(s) */
803 ierr = PetscMalloc1(api[am]+1,&ptap->apj)PetscMallocA(1,PETSC_FALSE,803,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(api[am]+1)*sizeof(**(&ptap->apj)),(&ptap
->apj));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),803,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
804 apj = ptap->apj;
805 ierr = PetscFreeSpaceContiguous(&free_space,ptap->apj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),805,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
806 ierr = PetscLLCondensedDestroy_Scalable(lnk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),806,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
807
808 /* create and assemble symbolic parallel matrix Cmpi */
809 /*----------------------------------------------------*/
810 ierr = MatCreate(comm,&Cmpi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),810,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
811 ierr = MatSetSizes(Cmpi,am,pn,PETSC_DETERMINE-1,PETSC_DETERMINE-1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),811,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
812 ierr = MatSetBlockSizesFromMats(Cmpi,A,P);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),812,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
813 ierr = MatGetType(A,&mtype);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),813,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
814 ierr = MatSetType(Cmpi,mtype);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),814,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
815 ierr = MatMPIAIJSetPreallocation(Cmpi,0,dnz,0,onz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),815,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
816
817 /* malloc apa for assembly Cmpi */
818 ierr = PetscCalloc1(apnz_max,&ptap->apa)PetscMallocA(1,PETSC_TRUE,818,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(apnz_max)*sizeof(**(&ptap->apa)),(&ptap->
apa));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),818,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
819
820 ierr = MatSetValues_MPIAIJ_CopyFromCSRFormat_Symbolic(Cmpi, apj, api);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),820,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
821 ierr = MatAssemblyBegin(Cmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),821,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
822 ierr = MatAssemblyEnd(Cmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),822,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
823 ierr = MatPreallocateFinalize(dnz,onz)0;_4_ierr = PetscFreeA(2,823,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,&(dnz),&(onz));do {if (__builtin_expect(!!(_4_ierr),
0)) return PetscError(((MPI_Comm)0x44000001),823,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0);} while(0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),823,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
824
825 ptap->destroy = Cmpi->ops->destroy;
826 ptap->duplicate = Cmpi->ops->duplicate;
827 Cmpi->ops->matmultnumeric = MatMatMultNumeric_MPIAIJ_MPIAIJ;
828 Cmpi->ops->destroy = MatDestroy_MPIAIJ_MatMatMult;
829 Cmpi->ops->freeintermediatedatastructures = MatFreeIntermediateDataStructures_MPIAIJ_AP;
830
831 /* attach the supporting struct to Cmpi for reuse */
832 c = (Mat_MPIAIJ*)Cmpi->data;
833 c->ap = ptap;
834 *C = Cmpi;
835
836 /* set MatInfo */
837 afill = (PetscReal)api[am]/(adi[am]+aoi[am]+pi_loc[pm]+1) + 1.e-5;
838 if (afill < 1.0) afill = 1.0;
839 Cmpi->info.mallocs = nspacedouble;
840 Cmpi->info.fill_ratio_given = fill;
841 Cmpi->info.fill_ratio_needed = afill;
842
843#if defined(PETSC_USE_INFO1)
844 if (api[am]) {
845 ierr = PetscInfo3(Cmpi,"Reallocs %D; Fill ratio: given %g needed %g.\n",nspacedouble,(double)fill,(double)afill)PetscInfo_Private(__func__,Cmpi,"Reallocs %D; Fill ratio: given %g needed %g.\n"
,nspacedouble,(double)fill,(double)afill);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),845,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
846 ierr = PetscInfo1(Cmpi,"Use MatMatMult(A,B,MatReuse,%g,&C) for best performance.;\n",(double)afill)PetscInfo_Private(__func__,Cmpi,"Use MatMatMult(A,B,MatReuse,%g,&C) for best performance.;\n"
,(double)afill);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),846,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
847 } else {
848 ierr = PetscInfo(Cmpi,"Empty matrix product\n")PetscInfo_Private(__func__,Cmpi,"Empty matrix product\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),848,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
849 }
850#endif
851 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
852}
853
854/* This function is needed for the seqMPI matrix-matrix multiplication. */
855/* Three input arrays are merged to one output array. The size of the */
856/* output array is also output. Duplicate entries only show up once. */
857static void Merge3SortedArrays(PetscInt size1, PetscInt *in1,
858 PetscInt size2, PetscInt *in2,
859 PetscInt size3, PetscInt *in3,
860 PetscInt *size4, PetscInt *out)
861{
862 int i = 0, j = 0, k = 0, l = 0;
863
864 /* Traverse all three arrays */
865 while (i<size1 && j<size2 && k<size3) {
866 if (in1[i] < in2[j] && in1[i] < in3[k]) {
867 out[l++] = in1[i++];
868 }
869 else if(in2[j] < in1[i] && in2[j] < in3[k]) {
870 out[l++] = in2[j++];
871 }
872 else if(in3[k] < in1[i] && in3[k] < in2[j]) {
873 out[l++] = in3[k++];
874 }
875 else if(in1[i] == in2[j] && in1[i] < in3[k]) {
876 out[l++] = in1[i];
877 i++, j++;
878 }
879 else if(in1[i] == in3[k] && in1[i] < in2[j]) {
880 out[l++] = in1[i];
881 i++, k++;
882 }
883 else if(in3[k] == in2[j] && in2[j] < in1[i]) {
884 out[l++] = in2[j];
885 k++, j++;
886 }
887 else if(in1[i] == in2[j] && in1[i] == in3[k]) {
888 out[l++] = in1[i];
889 i++, j++, k++;
890 }
891 }
892
893 /* Traverse two remaining arrays */
894 while (i<size1 && j<size2) {
895 if (in1[i] < in2[j]) {
896 out[l++] = in1[i++];
897 }
898 else if(in1[i] > in2[j]) {
899 out[l++] = in2[j++];
900 }
901 else {
902 out[l++] = in1[i];
903 i++, j++;
904 }
905 }
906
907 while (i<size1 && k<size3) {
908 if (in1[i] < in3[k]) {
909 out[l++] = in1[i++];
910 }
911 else if(in1[i] > in3[k]) {
912 out[l++] = in3[k++];
913 }
914 else {
915 out[l++] = in1[i];
916 i++, k++;
917 }
918 }
919
920 while (k<size3 && j<size2) {
921 if (in3[k] < in2[j]) {
922 out[l++] = in3[k++];
923 }
924 else if(in3[k] > in2[j]) {
925 out[l++] = in2[j++];
926 }
927 else {
928 out[l++] = in3[k];
929 k++, j++;
930 }
931 }
932
933 /* Traverse one remaining array */
934 while (i<size1) out[l++] = in1[i++];
935 while (j<size2) out[l++] = in2[j++];
936 while (k<size3) out[l++] = in3[k++];
937
938 *size4 = l;
939}
940
941/* This matrix-matrix multiplication algorithm divides the multiplication into three multiplications and */
942/* adds up the products. Two of these three multiplications are performed with existing (sequential) */
943/* matrix-matrix multiplications. */
944PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIAIJ_seqMPI(Mat A, Mat P, PetscReal fill, Mat *C)
945{
946 PetscErrorCode ierr;
947 MPI_Comm comm;
948 PetscMPIInt size;
949 Mat Cmpi;
950 Mat_APMPI *ptap;
951 PetscFreeSpaceList free_space_diag=NULL((void*)0), current_space=NULL((void*)0);
952 Mat_MPIAIJ *a =(Mat_MPIAIJ*)A->data;
953 Mat_SeqAIJ *ad =(Mat_SeqAIJ*)(a->A)->data,*ao=(Mat_SeqAIJ*)(a->B)->data,*p_loc;
954 Mat_MPIAIJ *p =(Mat_MPIAIJ*)P->data;
955 Mat_MPIAIJ *c;
956 Mat_SeqAIJ *adpd_seq, *p_off, *aopoth_seq;
957 PetscInt adponz, adpdnz;
958 PetscInt *pi_loc,*dnz,*onz;
959 PetscInt *adi=ad->i,*adj=ad->j,*aoi=ao->i,rstart=A->rmap->rstart;
960 PetscInt *lnk,i, i1=0,pnz,row,*adpoi,*adpoj, *api, *adpoJ, *aopJ, *apJ,*Jptr, aopnz, nspacedouble=0,j,nzi,
961 *apj,apnz, *adpdi, *adpdj, *adpdJ, *poff_i, *poff_j, *j_temp, *aopothi, *aopothj;
962 PetscInt am=A->rmap->n,pN=P->cmap->N,pn=P->cmap->n,pm=P->rmap->n, p_colstart, p_colend;
963 PetscBT lnkbt;
964 PetscReal afill;
965 PetscMPIInt rank;
966 Mat adpd, aopoth;
967 MatType mtype;
968 const char *prefix;
969
970 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 970; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
971 ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),971,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
972 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),972,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
973 ierr = MPI_Comm_rank(comm, &rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),973,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
974 ierr = MatGetOwnershipRangeColumn(P, &p_colstart, &p_colend); CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),974,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
975
976 /* create struct Mat_APMPI and attached it to C later */
977 ierr = PetscNew(&ptap)PetscMallocA(1,PETSC_TRUE,977,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(1)*sizeof(**((&ptap))),((&ptap)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),977,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
978
979 /* get P_oth by taking rows of P (= non-zero cols of local A) from other processors */
980 ierr = MatGetBrowsOfAoCols_MPIAIJ(A,P,MAT_INITIAL_MATRIX,&ptap->startsj_s,&ptap->startsj_r,&ptap->bufa,&ptap->P_oth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),980,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
981
982 /* get P_loc by taking all local rows of P */
983 ierr = MatMPIAIJGetLocalMat(P,MAT_INITIAL_MATRIX,&ptap->P_loc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),983,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
984
985
986 p_loc = (Mat_SeqAIJ*)(ptap->P_loc)->data;
987 pi_loc = p_loc->i;
988
989 /* Allocate memory for the i arrays of the matrices A*P, A_diag*P_off and A_offd * P */
990 ierr = PetscMalloc1(am+2,&api)PetscMallocA(1,PETSC_FALSE,990,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(am+2)*sizeof(**(&api)),(&api));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),990,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
991 ierr = PetscMalloc1(am+2,&adpoi)PetscMallocA(1,PETSC_FALSE,991,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(am+2)*sizeof(**(&adpoi)),(&adpoi));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),991,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
992
993 adpoi[0] = 0;
994 ptap->api = api;
995 api[0] = 0;
996
997 /* create and initialize a linked list, will be used for both A_diag * P_loc_off and A_offd * P_oth */
998 ierr = PetscLLCondensedCreate(pN,pN,&lnk,&lnkbt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),998,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
999 ierr = MatPreallocateInitialize(comm,am,pn,dnz,onz)0; do { PetscErrorCode _4_ierr; PetscInt __nrows = (am),__ncols
= (pn),__rstart,__start,__end; _4_ierr = PetscMallocA(2,PETSC_TRUE
,999,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)((size_t)__nrows)*sizeof(**(&dnz)),(&dnz),(size_t
)((size_t)__nrows)*sizeof(**(&onz)),(&onz));do {if (__builtin_expect
(!!(_4_ierr),0)) return PetscError(((MPI_Comm)0x44000001),999
,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __start = 0; __end
= __start; _4_ierr = MPI_Scan(&__ncols,&__end,1,((MPI_Datatype
)0x4c000405),(MPI_Op)(0x58000003),comm);do {if (__builtin_expect
(!!(_4_ierr),0)) return PetscError(((MPI_Comm)0x44000001),999
,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __start = __end
- __ncols; _4_ierr = MPI_Scan(&__nrows,&__rstart,1,(
(MPI_Datatype)0x4c000405),(MPI_Op)(0x58000003),comm);do {if (
__builtin_expect(!!(_4_ierr),0)) return PetscError(((MPI_Comm
)0x44000001),999,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __rstart = __rstart
- __nrows; do { } while(0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),999,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1000
1001 /* Symbolic calc of A_loc_diag * P_loc_diag */
1002 ierr = MatGetOptionsPrefix(A,&prefix);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1002,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1003 ierr = MatSetOptionsPrefix(a->A,prefix);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1003,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1004 ierr = MatAppendOptionsPrefix(a->A,"inner_diag_");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1004,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1005 ierr = MatMatMultSymbolic_SeqAIJ_SeqAIJ(a->A, p->A, fill, &adpd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1005,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1006 adpd_seq = (Mat_SeqAIJ*)((adpd)->data);
1007 adpdi = adpd_seq->i; adpdj = adpd_seq->j;
1008 p_off = (Mat_SeqAIJ*)((p->B)->data);
1009 poff_i = p_off->i; poff_j = p_off->j;
1010
1011 /* j_temp stores indices of a result row before they are added to the linked list */
1012 ierr = PetscMalloc1(pN+2,&j_temp)PetscMallocA(1,PETSC_FALSE,1012,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(pN+2)*sizeof(**(&j_temp)),(&j_temp));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1012,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1013
1014
1015 /* Symbolic calc of the A_diag * p_loc_off */
1016 /* Initial FreeSpace size is fill*(nnz(A)+nnz(P)) */
1017 ierr = PetscFreeSpaceGet(PetscRealIntMultTruncate(fill,PetscIntSumTruncate(adi[am],PetscIntSumTruncate(aoi[am],pi_loc[pm]))),&free_space_diag);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1017,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1018 current_space = free_space_diag;
1019
1020 for (i=0; i<am; i++) {
1021 /* A_diag * P_loc_off */
1022 nzi = adi[i+1] - adi[i];
1023 for (j=0; j<nzi; j++) {
1024 row = *adj++;
1025 pnz = poff_i[row+1] - poff_i[row];
1026 Jptr = poff_j + poff_i[row];
1027 for(i1 = 0; i1 < pnz; i1++) {
1028 j_temp[i1] = p->garray[Jptr[i1]];
1029 }
1030 /* add non-zero cols of P into the sorted linked list lnk */
1031 ierr = PetscLLCondensedAddSorted(pnz,j_temp,lnk,lnkbt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1031,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1032 }
1033
1034 adponz = lnk[0];
1035 adpoi[i+1] = adpoi[i] + adponz;
1036
1037 /* if free space is not available, double the total space in the list */
1038 if (current_space->local_remaining<adponz) {
1039 ierr = PetscFreeSpaceGet(PetscIntSumTruncate(adponz,current_space->total_array_size),&current_space);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1039,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1040 nspacedouble++;
1041 }
1042
1043 /* Copy data into free space, then initialize lnk */
1044 ierr = PetscLLCondensedClean(pN,adponz,current_space->array,lnk,lnkbt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1044,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1045
1046 current_space->array += adponz;
1047 current_space->local_used += adponz;
1048 current_space->local_remaining -= adponz;
1049 }
1050
1051 /* Symbolic calc of A_off * P_oth */
1052 ierr = MatSetOptionsPrefix(a->B,prefix);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1052,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1053 ierr = MatAppendOptionsPrefix(a->B,"inner_offdiag_");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1053,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1054 ierr = MatMatMultSymbolic_SeqAIJ_SeqAIJ(a->B, ptap->P_oth, fill, &aopoth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1054,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1055 aopoth_seq = (Mat_SeqAIJ*)((aopoth)->data);
1056 aopothi = aopoth_seq->i; aopothj = aopoth_seq->j;
1057
1058 /* Allocate space for apj, adpj, aopj, ... */
1059 /* destroy lists of free space and other temporary array(s) */
1060
1061 ierr = PetscMalloc1(aopothi[am] + adpoi[am] + adpdi[am]+2, &ptap->apj)PetscMallocA(1,PETSC_FALSE,1061,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(aopothi[am] + adpoi[am] + adpdi[am]+2)*sizeof(**(&
ptap->apj)),(&ptap->apj));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1061,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1062 ierr = PetscMalloc1(adpoi[am]+2, &adpoj)PetscMallocA(1,PETSC_FALSE,1062,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(adpoi[am]+2)*sizeof(**(&adpoj)),(&adpoj));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1062,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1063
1064 /* Copy from linked list to j-array */
1065 ierr = PetscFreeSpaceContiguous(&free_space_diag,adpoj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1065,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1066 ierr = PetscLLDestroy(lnk,lnkbt)(((*PetscTrFree)((void*)(lnk),1066,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((lnk) = 0,0)) || PetscBTDestroy(&(lnkbt)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1066,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1067
1068 adpoJ = adpoj;
1069 adpdJ = adpdj;
1070 aopJ = aopothj;
1071 apj = ptap->apj;
1072 apJ = apj; /* still empty */
1073
1074 /* Merge j-arrays of A_off * P, A_diag * P_loc_off, and */
1075 /* A_diag * P_loc_diag to get A*P */
1076 for (i = 0; i < am; i++) {
1077 aopnz = aopothi[i+1] - aopothi[i];
1078 adponz = adpoi[i+1] - adpoi[i];
1079 adpdnz = adpdi[i+1] - adpdi[i];
1080
1081 /* Correct indices from A_diag*P_diag */
1082 for(i1 = 0; i1 < adpdnz; i1++) {
1083 adpdJ[i1] += p_colstart;
1084 }
1085 /* Merge j-arrays of A_diag * P_loc_off and A_diag * P_loc_diag and A_off * P_oth */
1086 Merge3SortedArrays(adponz, adpoJ, adpdnz, adpdJ, aopnz, aopJ, &apnz, apJ);
1087 ierr = MatPreallocateSet(i+rstart, apnz, apJ, dnz, onz)0;do { PetscInt __i; if (i+rstart < __rstart) return PetscError
(((MPI_Comm)0x44000001),1087,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,63,PETSC_ERROR_INITIAL,"Trying to set preallocation for row %D less than first local row %D"
,i+rstart,__rstart); if (i+rstart >= __rstart+__nrows) return
PetscError(((MPI_Comm)0x44000001),1087,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,63,PETSC_ERROR_INITIAL,"Trying to set preallocation for row %D greater than last local row %D"
,i+rstart,__rstart+__nrows-1); for (__i=0; __i<apnz; __i++
) { if ((apJ)[__i] < __start || (apJ)[__i] >= __end) onz
[i+rstart - __rstart]++; else if (dnz[i+rstart - __rstart] <
__ncols) dnz[i+rstart - __rstart]++; }} while (0); CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1087,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1088
1089 aopJ += aopnz;
1090 adpoJ += adponz;
1091 adpdJ += adpdnz;
1092 apJ += apnz;
1093 api[i+1] = api[i] + apnz;
1094 }
1095
1096 /* malloc apa to store dense row A[i,:]*P */
1097 ierr = PetscCalloc1(pN+2,&ptap->apa)PetscMallocA(1,PETSC_TRUE,1097,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(pN+2)*sizeof(**(&ptap->apa)),(&ptap->
apa));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1097,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1098
1099 /* create and assemble symbolic parallel matrix Cmpi */
1100 ierr = MatCreate(comm,&Cmpi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1100,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1101 ierr = MatSetSizes(Cmpi,am,pn,PETSC_DETERMINE-1,PETSC_DETERMINE-1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1101,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1102 ierr = MatSetBlockSizesFromMats(Cmpi,A,P);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1102,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1103 ierr = MatGetType(A,&mtype);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1103,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1104 ierr = MatSetType(Cmpi,mtype);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1104,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1105 ierr = MatMPIAIJSetPreallocation(Cmpi,0,dnz,0,onz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1105,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1106
1107
1108 ierr = MatSetValues_MPIAIJ_CopyFromCSRFormat_Symbolic(Cmpi, apj, api);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1108,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1109 ierr = MatAssemblyBegin(Cmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1109,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1110 ierr = MatAssemblyEnd(Cmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1110,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1111 ierr = MatPreallocateFinalize(dnz,onz)0;_4_ierr = PetscFreeA(2,1111,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,&(dnz),&(onz));do {if (__builtin_expect(!!(_4_ierr),
0)) return PetscError(((MPI_Comm)0x44000001),1111,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0);} while(0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1111,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1112
1113
1114 ptap->destroy = Cmpi->ops->destroy;
1115 ptap->duplicate = Cmpi->ops->duplicate;
1116 Cmpi->ops->matmultnumeric = MatMatMultNumeric_MPIAIJ_MPIAIJ_nonscalable;
1117 Cmpi->ops->destroy = MatDestroy_MPIAIJ_MatMatMult;
1118
1119 /* attach the supporting struct to Cmpi for reuse */
1120 c = (Mat_MPIAIJ*)Cmpi->data;
1121 c->ap = ptap;
1122 *C = Cmpi;
1123
1124 /* set MatInfo */
1125 afill = (PetscReal)api[am]/(adi[am]+aoi[am]+pi_loc[pm]+1) + 1.e-5;
1126 if (afill < 1.0) afill = 1.0;
1127 Cmpi->info.mallocs = nspacedouble;
1128 Cmpi->info.fill_ratio_given = fill;
1129 Cmpi->info.fill_ratio_needed = afill;
1130
1131#if defined(PETSC_USE_INFO1)
1132 if (api[am]) {
1133 ierr = PetscInfo3(Cmpi,"Reallocs %D; Fill ratio: given %g needed %g.\n",nspacedouble,(double)fill,(double)afill)PetscInfo_Private(__func__,Cmpi,"Reallocs %D; Fill ratio: given %g needed %g.\n"
,nspacedouble,(double)fill,(double)afill);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1133,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1134 ierr = PetscInfo1(Cmpi,"Use MatMatMult(A,B,MatReuse,%g,&C) for best performance.;\n",(double)afill)PetscInfo_Private(__func__,Cmpi,"Use MatMatMult(A,B,MatReuse,%g,&C) for best performance.;\n"
,(double)afill);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1134,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1135 } else {
1136 ierr = PetscInfo(Cmpi,"Empty matrix product\n")PetscInfo_Private(__func__,Cmpi,"Empty matrix product\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1136,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1137 }
1138#endif
1139
1140 ierr = MatDestroy(&aopoth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1140,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1141 ierr = MatDestroy(&adpd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1141,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1142 ierr = PetscFree(j_temp)((*PetscTrFree)((void*)(j_temp),1142,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((j_temp) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1142,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1143 ierr = PetscFree(adpoj)((*PetscTrFree)((void*)(adpoj),1143,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((adpoj) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1143,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1144 ierr = PetscFree(adpoi)((*PetscTrFree)((void*)(adpoi),1144,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((adpoi) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1144,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1145 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1146}
1147
1148
1149/*-------------------------------------------------------------------------*/
1150PetscErrorCode MatTransposeMatMult_MPIAIJ_MPIAIJ(Mat P,Mat A,MatReuse scall,PetscReal fill,Mat *C)
1151{
1152 PetscErrorCode ierr;
1153 const char *algTypes[3] = {"scalable","nonscalable","matmatmult"};
1154 PetscInt aN=A->cmap->N,alg=1; /* set default algorithm */
1155 PetscBool flg;
1156
1157 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 1157; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1158 if (scall == MAT_INITIAL_MATRIX) {
1159 ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"MatTransposeMatMult","Mat")0; do { PetscOptionItems PetscOptionsObjectBase; PetscOptionItems
*PetscOptionsObject = &PetscOptionsObjectBase; PetscMemzero
(PetscOptionsObject,sizeof(PetscOptionItems)); for (PetscOptionsObject
->count=(PetscOptionsPublish?-1:1); PetscOptionsObject->
count<2; PetscOptionsObject->count++) { PetscErrorCode _5_ierr
= PetscOptionsBegin_Private(PetscOptionsObject,PetscObjectComm
((PetscObject)A),((PetscObject)A)->prefix,"MatTransposeMatMult"
,"Mat");do {if (__builtin_expect(!!(_5_ierr),0)) return PetscError
(((MPI_Comm)0x44000001),1159,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_5_ierr,PETSC_ERROR_REPEAT," ");} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1159,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1160 ierr = PetscOptionsEList("-mattransposematmult_via","Algorithmic approach","MatTransposeMatMult",algTypes,3,algTypes[1],&alg,&flg)PetscOptionsEList_Private(PetscOptionsObject,"-mattransposematmult_via"
,"Algorithmic approach","MatTransposeMatMult",algTypes,3,algTypes
[1],&alg,&flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1160,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1161 ierr = PetscOptionsEnd()_5_ierr = PetscOptionsEnd_Private(PetscOptionsObject);do {if (
__builtin_expect(!!(_5_ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1161,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_5_ierr,PETSC_ERROR_REPEAT," ");} while (0);}} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1161,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1162
1163 ierr = PetscLogEventBegin(MAT_TransposeMatMultSymbolic,P,A,0,0)(((PetscLogPLB && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[MAT_TransposeMatMultSymbolic].active) ? (*PetscLogPLB)((MAT_TransposeMatMultSymbolic
),0,(PetscObject)(P),(PetscObject)(A),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1163,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1164 switch (alg) {
1165 case 1:
1166 if (!flg && aN > 100000) { /* may switch to scalable algorithm as default */
1167 MatInfo Ainfo,Pinfo;
1168 PetscInt nz_local;
1169 PetscBool alg_scalable_loc=PETSC_FALSE,alg_scalable;
1170 MPI_Comm comm;
1171
1172 ierr = MatGetInfo(A,MAT_LOCAL,&Ainfo);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1172,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1173 ierr = MatGetInfo(P,MAT_LOCAL,&Pinfo);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1173,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1174 nz_local = (PetscInt)(Ainfo.nz_allocated + Pinfo.nz_allocated); /* estimated local nonzero entries */
1175
1176 if (aN > fill*nz_local) alg_scalable_loc = PETSC_TRUE;
1177 ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1177,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1178 ierr = MPIU_Allreduce(&alg_scalable_loc,&alg_scalable,1,MPIU_BOOL,MPI_LOR,comm)(PetscAllreduceBarrierCheck(comm,1,1178,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((petsc_allreduce_ct += PetscMPIParallelComm((comm)),0) ||
MPI_Allreduce((&alg_scalable_loc),(&alg_scalable),(1
),(MPIU_BOOL),((MPI_Op)(0x58000007)),(comm))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1178,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1179
1180 if (alg_scalable) {
1181 alg = 0; /* scalable algorithm would slower than nonscalable algorithm */
1182 ierr = MatTransposeMatMultSymbolic_MPIAIJ_MPIAIJ(P,A,fill,C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1182,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1183 break;
1184 }
1185 }
1186 ierr = MatTransposeMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable(P,A,fill,C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1186,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1187 break;
1188 case 2:
1189 {
1190 Mat Pt;
1191 Mat_APMPI *ptap;
1192 Mat_MPIAIJ *c;
1193 ierr = MatTranspose(P,MAT_INITIAL_MATRIX,&Pt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1193,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1194 ierr = MatMatMult(Pt,A,MAT_INITIAL_MATRIX,fill,C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1194,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1195 c = (Mat_MPIAIJ*)(*C)->data;
1196 ptap = c->ap;
1197 if (ptap) {
1198 ptap->Pt = Pt;
1199 (*C)->ops->freeintermediatedatastructures = MatFreeIntermediateDataStructures_MPIAIJ_AP;
1200 }
1201 (*C)->ops->mattransposemultnumeric = MatTransposeMatMultNumeric_MPIAIJ_MPIAIJ_matmatmult;
1202 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1203 }
1204 break;
1205 default: /* scalable algorithm */
1206 ierr = MatTransposeMatMultSymbolic_MPIAIJ_MPIAIJ(P,A,fill,C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1206,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1207 break;
1208 }
1209 ierr = PetscLogEventEnd(MAT_TransposeMatMultSymbolic,P,A,0,0)(((PetscLogPLE && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[MAT_TransposeMatMultSymbolic].active) ? (*PetscLogPLE)((MAT_TransposeMatMultSymbolic
),0,(PetscObject)(P),(PetscObject)(A),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1209,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1210
1211 {
1212 Mat_MPIAIJ *c = (Mat_MPIAIJ*)(*C)->data;
1213 Mat_APMPI *ap = c->ap;
1214 ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)(*C)),((PetscObject)(*C))->prefix,"MatFreeIntermediateDataStructures","Mat")0; do { PetscOptionItems PetscOptionsObjectBase; PetscOptionItems
*PetscOptionsObject = &PetscOptionsObjectBase; PetscMemzero
(PetscOptionsObject,sizeof(PetscOptionItems)); for (PetscOptionsObject
->count=(PetscOptionsPublish?-1:1); PetscOptionsObject->
count<2; PetscOptionsObject->count++) { PetscErrorCode _5_ierr
= PetscOptionsBegin_Private(PetscOptionsObject,PetscObjectComm
((PetscObject)(*C)),((PetscObject)(*C))->prefix,"MatFreeIntermediateDataStructures"
,"Mat");do {if (__builtin_expect(!!(_5_ierr),0)) return PetscError
(((MPI_Comm)0x44000001),1214,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_5_ierr,PETSC_ERROR_REPEAT," ");} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1214,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1215 ap->freestruct = PETSC_FALSE;
1216 ierr = PetscOptionsBool("-mat_freeintermediatedatastructures","Free intermediate data structures", "MatFreeIntermediateDataStructures",ap->freestruct,&ap->freestruct, NULL)PetscOptionsBool_Private(PetscOptionsObject,"-mat_freeintermediatedatastructures"
,"Free intermediate data structures","MatFreeIntermediateDataStructures"
,ap->freestruct,&ap->freestruct,((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1216,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1217 ierr = PetscOptionsEnd()_5_ierr = PetscOptionsEnd_Private(PetscOptionsObject);do {if (
__builtin_expect(!!(_5_ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1217,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_5_ierr,PETSC_ERROR_REPEAT," ");} while (0);}} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1217,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1218 }
1219 }
1220
1221 ierr = PetscLogEventBegin(MAT_TransposeMatMultNumeric,P,A,0,0)(((PetscLogPLB && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[MAT_TransposeMatMultNumeric].active) ? (*PetscLogPLB)((MAT_TransposeMatMultNumeric
),0,(PetscObject)(P),(PetscObject)(A),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1221,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1222 ierr = (*(*C)->ops->mattransposemultnumeric)(P,A,*C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1222,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1223 ierr = PetscLogEventEnd(MAT_TransposeMatMultNumeric,P,A,0,0)(((PetscLogPLE && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[MAT_TransposeMatMultNumeric].active) ? (*PetscLogPLE)((MAT_TransposeMatMultNumeric
),0,(PetscObject)(P),(PetscObject)(A),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1223,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1224 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1225}
1226
1227/* This routine only works when scall=MAT_REUSE_MATRIX! */
1228PetscErrorCode MatTransposeMatMultNumeric_MPIAIJ_MPIAIJ_matmatmult(Mat P,Mat A,Mat C)
1229{
1230 PetscErrorCode ierr;
1231 Mat_MPIAIJ *c=(Mat_MPIAIJ*)C->data;
1232 Mat_APMPI *ptap= c->ap;
1233 Mat Pt;
1234
1235 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 1235; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1236 if (!ptap->Pt) {
1237 MPI_Comm comm;
1238 ierr = PetscObjectGetComm((PetscObject)C,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1238,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1239 SETERRQ(comm,PETSC_ERR_ARG_WRONGSTATE,"PtA cannot be reused. Do not call MatFreeIntermediateDataStructures() or use '-mat_freeintermediatedatastructures'")return PetscError(comm,1239,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,73,PETSC_ERROR_INITIAL,"PtA cannot be reused. Do not call MatFreeIntermediateDataStructures() or use '-mat_freeintermediatedatastructures'"
);
1240 }
1241
1242 Pt=ptap->Pt;
1243 ierr = MatTranspose(P,MAT_REUSE_MATRIX,&Pt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1243,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1244 ierr = MatMatMultNumeric(Pt,A,C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1244,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1245
1246 /* supporting struct ptap consumes almost same amount of memory as C=PtAP, release it if C will not be updated by A and P */
1247 if (ptap->freestruct) {
1248 ierr = MatFreeIntermediateDataStructures(C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1248,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1249 }
1250 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1251}
1252
1253/* This routine is modified from MatPtAPSymbolic_MPIAIJ_MPIAIJ() */
1254PetscErrorCode MatTransposeMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable(Mat P,Mat A,PetscReal fill,Mat *C)
1255{
1256 PetscErrorCode ierr;
1257 Mat_APMPI *ptap;
1258 Mat_MPIAIJ *p=(Mat_MPIAIJ*)P->data,*c;
1259 MPI_Comm comm;
1260 PetscMPIInt size,rank;
1261 Mat Cmpi;
1262 PetscFreeSpaceList free_space=NULL((void*)0),current_space=NULL((void*)0);
1263 PetscInt pn=P->cmap->n,aN=A->cmap->N,an=A->cmap->n;
1264 PetscInt *lnk,i,k,nsend;
1265 PetscBT lnkbt;
1266 PetscMPIInt tagi,tagj,*len_si,*len_s,*len_ri,icompleted=0,nrecv;
1267 PetscInt **buf_rj,**buf_ri,**buf_ri_k;
1268 PetscInt len,proc,*dnz,*onz,*owners,nzi;
1269 PetscInt nrows,*buf_s,*buf_si,*buf_si_i,**nextrow,**nextci;
1270 MPI_Request *swaits,*rwaits;
1271 MPI_Status *sstatus,rstatus;
1272 PetscLayout rowmap;
1273 PetscInt *owners_co,*coi,*coj; /* i and j array of (p->B)^T*A*P - used in the communication */
1274 PetscMPIInt *len_r,*id_r; /* array of length of comm->size, store send/recv matrix values */
1275 PetscInt *Jptr,*prmap=p->garray,con,j,Crmax;
1276 Mat_SeqAIJ *a_loc,*c_loc,*c_oth;
1277 PetscTable ta;
1278 MatType mtype;
1279 const char *prefix;
1280
1281 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 1281; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1282 ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1282,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1283 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1283,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1284 ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1284,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1285
1286 /* create symbolic parallel matrix Cmpi */
1287 ierr = MatCreate(comm,&Cmpi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1287,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1288 ierr = MatGetType(A,&mtype);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1288,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1289 ierr = MatSetType(Cmpi,mtype);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1289,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1290
1291 Cmpi->ops->mattransposemultnumeric = MatTransposeMatMultNumeric_MPIAIJ_MPIAIJ_nonscalable;
1292
1293 /* create struct Mat_APMPI and attached it to C later */
1294 ierr = PetscNew(&ptap)PetscMallocA(1,PETSC_TRUE,1294,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(1)*sizeof(**((&ptap))),((&ptap)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1294,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1295 ptap->reuse = MAT_INITIAL_MATRIX;
1296
1297 /* (0) compute Rd = Pd^T, Ro = Po^T */
1298 /* --------------------------------- */
1299 ierr = MatTranspose_SeqAIJ(p->A,MAT_INITIAL_MATRIX,&ptap->Rd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1299,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1300 ierr = MatTranspose_SeqAIJ(p->B,MAT_INITIAL_MATRIX,&ptap->Ro);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1300,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1301
1302 /* (1) compute symbolic A_loc */
1303 /* ---------------------------*/
1304 ierr = MatMPIAIJGetLocalMat(A,MAT_INITIAL_MATRIX,&ptap->A_loc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1304,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1305
1306 /* (2-1) compute symbolic C_oth = Ro*A_loc */
1307 /* ------------------------------------ */
1308 ierr = MatGetOptionsPrefix(A,&prefix);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1308,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1309 ierr = MatSetOptionsPrefix(ptap->Ro,prefix);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1309,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1310 ierr = MatAppendOptionsPrefix(ptap->Ro,"inner_offdiag_");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1310,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1311 ierr = MatMatMultSymbolic_SeqAIJ_SeqAIJ(ptap->Ro,ptap->A_loc,fill,&ptap->C_oth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1311,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1312
1313 /* (3) send coj of C_oth to other processors */
1314 /* ------------------------------------------ */
1315 /* determine row ownership */
1316 ierr = PetscLayoutCreate(comm,&rowmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1316,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1317 rowmap->n = pn;
1318 rowmap->bs = 1;
1319 ierr = PetscLayoutSetUp(rowmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1319,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1320 owners = rowmap->range;
1321
1322 /* determine the number of messages to send, their lengths */
1323 ierr = PetscMalloc4(size,&len_s,size,&len_si,size,&sstatus,size+2,&owners_co)PetscMallocA(4,PETSC_FALSE,1323,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(size)*sizeof(**(&len_s)),(&len_s),(size_t)(
size)*sizeof(**(&len_si)),(&len_si),(size_t)(size)*sizeof
(**(&sstatus)),(&sstatus),(size_t)(size+2)*sizeof(**(
&owners_co)),(&owners_co));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1323,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1324 ierr = PetscArrayzero(len_s,size)PetscMemzero(len_s,(size)*sizeof(*(len_s)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1324,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1325 ierr = PetscArrayzero(len_si,size)PetscMemzero(len_si,(size)*sizeof(*(len_si)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1325,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1326
1327 c_oth = (Mat_SeqAIJ*)ptap->C_oth->data;
1328 coi = c_oth->i; coj = c_oth->j;
1329 con = ptap->C_oth->rmap->n;
1330 proc = 0;
1331 for (i=0; i<con; i++) {
1332 while (prmap[i] >= owners[proc+1]) proc++;
1333 len_si[proc]++; /* num of rows in Co(=Pt*A) to be sent to [proc] */
1334 len_s[proc] += coi[i+1] - coi[i]; /* num of nonzeros in Co to be sent to [proc] */
1335 }
1336
1337 len = 0; /* max length of buf_si[], see (4) */
1338 owners_co[0] = 0;
1339 nsend = 0;
1340 for (proc=0; proc<size; proc++) {
1341 owners_co[proc+1] = owners_co[proc] + len_si[proc];
1342 if (len_s[proc]) {
1343 nsend++;
1344 len_si[proc] = 2*(len_si[proc] + 1); /* length of buf_si to be sent to [proc] */
1345 len += len_si[proc];
1346 }
1347 }
1348
1349 /* determine the number and length of messages to receive for coi and coj */
1350 ierr = PetscGatherNumberOfMessages(comm,NULL((void*)0),len_s,&nrecv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1350,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1351 ierr = PetscGatherMessageLengths2(comm,nsend,nrecv,len_s,len_si,&id_r,&len_r,&len_ri);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1351,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1352
1353 /* post the Irecv and Isend of coj */
1354 ierr = PetscCommGetNewTag(comm,&tagj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1354,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1355 ierr = PetscPostIrecvInt(comm,tagj,nrecv,id_r,len_r,&buf_rj,&rwaits);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1355,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1356 ierr = PetscMalloc1(nsend+1,&swaits)PetscMallocA(1,PETSC_FALSE,1356,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(nsend+1)*sizeof(**(&swaits)),(&swaits));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1356,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1357 for (proc=0, k=0; proc<size; proc++) {
1358 if (!len_s[proc]) continue;
1359 i = owners_co[proc];
1360 ierr = MPI_Isend(coj+coi[i],len_s[proc],MPIU_INT,proc,tagj,comm,swaits+k)((petsc_isend_ct++,0) || PetscMPITypeSize(&(petsc_isend_len
),(len_s[proc]),(((MPI_Datatype)0x4c000405))) || MPI_Isend((coj
+coi[i]),(len_s[proc]),(((MPI_Datatype)0x4c000405)),(proc),(tagj
),(comm),(swaits+k)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1360,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1361 k++;
1362 }
1363
1364 /* (2-2) compute symbolic C_loc = Rd*A_loc */
1365 /* ---------------------------------------- */
1366 ierr = MatSetOptionsPrefix(ptap->Rd,prefix);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1366,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1367 ierr = MatAppendOptionsPrefix(ptap->Rd,"inner_diag_");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1367,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1368 ierr = MatMatMultSymbolic_SeqAIJ_SeqAIJ(ptap->Rd,ptap->A_loc,fill,&ptap->C_loc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1368,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1369 c_loc = (Mat_SeqAIJ*)ptap->C_loc->data;
1370
1371 /* receives coj are complete */
1372 for (i=0; i<nrecv; i++) {
1373 ierr = MPI_Waitany(nrecv,rwaits,&icompleted,&rstatus)((petsc_wait_any_ct++,petsc_sum_of_waits_ct++,0) || MPI_Waitany
((nrecv),(rwaits),(&icompleted),(&rstatus)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1373,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1374 }
1375 ierr = PetscFree(rwaits)((*PetscTrFree)((void*)(rwaits),1375,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((rwaits) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1375,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1376 if (nsend) {ierr = MPI_Waitall(nsend,swaits,sstatus)((petsc_wait_all_ct++,petsc_sum_of_waits_ct += (PetscLogDouble
) (nsend),0) || MPI_Waitall((nsend),(swaits),(sstatus)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1376,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1377
1378 /* add received column indices into ta to update Crmax */
1379 a_loc = (Mat_SeqAIJ*)(ptap->A_loc)->data;
1380
1381 /* create and initialize a linked list */
1382 ierr = PetscTableCreate(an,aN,&ta);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1382,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0); /* for compute Crmax */
1383 MatRowMergeMax_SeqAIJ(a_loc,ptap->A_loc->rmap->N,ta){ PetscInt _j,_row,_nz,*_col; if (a_loc) { for (_row=0; _row<
ptap->A_loc->rmap->N; _row++) { _nz = a_loc->i[_row
+1] - a_loc->i[_row]; for (_j=0; _j<_nz; _j++) { _col =
_j + a_loc->j + a_loc->i[_row]; PetscTableAdd(ta,*_col
+1,1,INSERT_VALUES); } } } };
1384
1385 for (k=0; k<nrecv; k++) {/* k-th received message */
1386 Jptr = buf_rj[k];
1387 for (j=0; j<len_r[k]; j++) {
1388 ierr = PetscTableAdd(ta,*(Jptr+j)+1,1,INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1388,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1389 }
1390 }
1391 ierr = PetscTableGetCount(ta,&Crmax);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1391,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1392 ierr = PetscTableDestroy(&ta);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1392,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1393
1394 /* (4) send and recv coi */
1395 /*-----------------------*/
1396 ierr = PetscCommGetNewTag(comm,&tagi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1396,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1397 ierr = PetscPostIrecvInt(comm,tagi,nrecv,id_r,len_ri,&buf_ri,&rwaits);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1397,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1398 ierr = PetscMalloc1(len+1,&buf_s)PetscMallocA(1,PETSC_FALSE,1398,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(len+1)*sizeof(**(&buf_s)),(&buf_s));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1398,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1399 buf_si = buf_s; /* points to the beginning of k-th msg to be sent */
1400 for (proc=0,k=0; proc<size; proc++) {
1401 if (!len_s[proc]) continue;
1402 /* form outgoing message for i-structure:
1403 buf_si[0]: nrows to be sent
1404 [1:nrows]: row index (global)
1405 [nrows+1:2*nrows+1]: i-structure index
1406 */
1407 /*-------------------------------------------*/
1408 nrows = len_si[proc]/2 - 1; /* num of rows in Co to be sent to [proc] */
1409 buf_si_i = buf_si + nrows+1;
1410 buf_si[0] = nrows;
1411 buf_si_i[0] = 0;
1412 nrows = 0;
1413 for (i=owners_co[proc]; i<owners_co[proc+1]; i++) {
1414 nzi = coi[i+1] - coi[i];
1415 buf_si_i[nrows+1] = buf_si_i[nrows] + nzi; /* i-structure */
1416 buf_si[nrows+1] = prmap[i] -owners[proc]; /* local row index */
1417 nrows++;
1418 }
1419 ierr = MPI_Isend(buf_si,len_si[proc],MPIU_INT,proc,tagi,comm,swaits+k)((petsc_isend_ct++,0) || PetscMPITypeSize(&(petsc_isend_len
),(len_si[proc]),(((MPI_Datatype)0x4c000405))) || MPI_Isend((
buf_si),(len_si[proc]),(((MPI_Datatype)0x4c000405)),(proc),(tagi
),(comm),(swaits+k)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1419,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1420 k++;
1421 buf_si += len_si[proc];
1422 }
1423 for (i=0; i<nrecv; i++) {
1424 ierr = MPI_Waitany(nrecv,rwaits,&icompleted,&rstatus)((petsc_wait_any_ct++,petsc_sum_of_waits_ct++,0) || MPI_Waitany
((nrecv),(rwaits),(&icompleted),(&rstatus)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1424,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1425 }
1426 ierr = PetscFree(rwaits)((*PetscTrFree)((void*)(rwaits),1426,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((rwaits) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1426,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1427 if (nsend) {ierr = MPI_Waitall(nsend,swaits,sstatus)((petsc_wait_all_ct++,petsc_sum_of_waits_ct += (PetscLogDouble
) (nsend),0) || MPI_Waitall((nsend),(swaits),(sstatus)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1427,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1428
1429 ierr = PetscFree4(len_s,len_si,sstatus,owners_co)PetscFreeA(4,1429,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,&(len_s),&(len_si),&(sstatus),&(owners_co));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1429,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1430 ierr = PetscFree(len_ri)((*PetscTrFree)((void*)(len_ri),1430,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((len_ri) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1430,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1431 ierr = PetscFree(swaits)((*PetscTrFree)((void*)(swaits),1431,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((swaits) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1431,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1432 ierr = PetscFree(buf_s)((*PetscTrFree)((void*)(buf_s),1432,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((buf_s) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1432,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1433
1434 /* (5) compute the local portion of Cmpi */
1435 /* ------------------------------------------ */
1436 /* set initial free space to be Crmax, sufficient for holding nozeros in each row of Cmpi */
1437 ierr = PetscFreeSpaceGet(Crmax,&free_space);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1437,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1438 current_space = free_space;
1439
1440 ierr = PetscMalloc3(nrecv,&buf_ri_k,nrecv,&nextrow,nrecv,&nextci)PetscMallocA(3,PETSC_FALSE,1440,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(nrecv)*sizeof(**(&buf_ri_k)),(&buf_ri_k),(size_t
)(nrecv)*sizeof(**(&nextrow)),(&nextrow),(size_t)(nrecv
)*sizeof(**(&nextci)),(&nextci));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1440,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1441 for (k=0; k<nrecv; k++) {
1442 buf_ri_k[k] = buf_ri[k]; /* beginning of k-th recved i-structure */
1443 nrows = *buf_ri_k[k];
1444 nextrow[k] = buf_ri_k[k] + 1; /* next row number of k-th recved i-structure */
1445 nextci[k] = buf_ri_k[k] + (nrows + 1); /* poins to the next i-structure of k-th recved i-structure */
1446 }
1447
1448 ierr = MatPreallocateInitialize(comm,pn,an,dnz,onz)0; do { PetscErrorCode _4_ierr; PetscInt __nrows = (pn),__ncols
= (an),__rstart,__start,__end; _4_ierr = PetscMallocA(2,PETSC_TRUE
,1448,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)((size_t)__nrows)*sizeof(**(&dnz)),(&dnz),(size_t
)((size_t)__nrows)*sizeof(**(&onz)),(&onz));do {if (__builtin_expect
(!!(_4_ierr),0)) return PetscError(((MPI_Comm)0x44000001),1448
,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __start = 0; __end
= __start; _4_ierr = MPI_Scan(&__ncols,&__end,1,((MPI_Datatype
)0x4c000405),(MPI_Op)(0x58000003),comm);do {if (__builtin_expect
(!!(_4_ierr),0)) return PetscError(((MPI_Comm)0x44000001),1448
,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __start = __end
- __ncols; _4_ierr = MPI_Scan(&__nrows,&__rstart,1,(
(MPI_Datatype)0x4c000405),(MPI_Op)(0x58000003),comm);do {if (
__builtin_expect(!!(_4_ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1448,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __rstart = __rstart
- __nrows; do { } while(0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1448,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1449 ierr = PetscLLCondensedCreate(Crmax,aN,&lnk,&lnkbt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1449,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1450 for (i=0; i<pn; i++) {
1451 /* add C_loc into Cmpi */
1452 nzi = c_loc->i[i+1] - c_loc->i[i];
1453 Jptr = c_loc->j + c_loc->i[i];
1454 ierr = PetscLLCondensedAddSorted(nzi,Jptr,lnk,lnkbt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1454,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1455
1456 /* add received col data into lnk */
1457 for (k=0; k<nrecv; k++) { /* k-th received message */
1458 if (i == *nextrow[k]) { /* i-th row */
1459 nzi = *(nextci[k]+1) - *nextci[k];
1460 Jptr = buf_rj[k] + *nextci[k];
1461 ierr = PetscLLCondensedAddSorted(nzi,Jptr,lnk,lnkbt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1461,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1462 nextrow[k]++; nextci[k]++;
1463 }
1464 }
1465 nzi = lnk[0];
1466
1467 /* copy data into free space, then initialize lnk */
1468 ierr = PetscLLCondensedClean(aN,nzi,current_space->array,lnk,lnkbt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1468,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1469 ierr = MatPreallocateSet(i+owners[rank],nzi,current_space->array,dnz,onz)0;do { PetscInt __i; if (i+owners[rank] < __rstart) return
PetscError(((MPI_Comm)0x44000001),1469,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,63,PETSC_ERROR_INITIAL,"Trying to set preallocation for row %D less than first local row %D"
,i+owners[rank],__rstart); if (i+owners[rank] >= __rstart+
__nrows) return PetscError(((MPI_Comm)0x44000001),1469,__func__
,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,63,PETSC_ERROR_INITIAL,"Trying to set preallocation for row %D greater than last local row %D"
,i+owners[rank],__rstart+__nrows-1); for (__i=0; __i<nzi; __i
++) { if ((current_space->array)[__i] < __start || (current_space
->array)[__i] >= __end) onz[i+owners[rank] - __rstart]++
; else if (dnz[i+owners[rank] - __rstart] < __ncols) dnz[i
+owners[rank] - __rstart]++; }} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1469,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1470 }
1471 ierr = PetscFree3(buf_ri_k,nextrow,nextci)PetscFreeA(3,1471,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,&(buf_ri_k),&(nextrow),&(nextci));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1471,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1472 ierr = PetscLLDestroy(lnk,lnkbt)(((*PetscTrFree)((void*)(lnk),1472,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((lnk) = 0,0)) || PetscBTDestroy(&(lnkbt)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1472,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1473 ierr = PetscFreeSpaceDestroy(free_space);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1473,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1474
1475 /* local sizes and preallocation */
1476 ierr = MatSetSizes(Cmpi,pn,an,PETSC_DETERMINE-1,PETSC_DETERMINE-1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1476,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1477 if (P->cmap->bs > 0) {ierr = PetscLayoutSetBlockSize(Cmpi->rmap,P->cmap->bs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1477,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1478 if (A->cmap->bs > 0) {ierr = PetscLayoutSetBlockSize(Cmpi->cmap,A->cmap->bs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1478,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1479 ierr = MatMPIAIJSetPreallocation(Cmpi,0,dnz,0,onz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1479,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1480 ierr = MatPreallocateFinalize(dnz,onz)0;_4_ierr = PetscFreeA(2,1480,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,&(dnz),&(onz));do {if (__builtin_expect(!!(_4_ierr),
0)) return PetscError(((MPI_Comm)0x44000001),1480,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0);} while(0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1480,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1481
1482 /* members in merge */
1483 ierr = PetscFree(id_r)((*PetscTrFree)((void*)(id_r),1483,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((id_r) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1483,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1484 ierr = PetscFree(len_r)((*PetscTrFree)((void*)(len_r),1484,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((len_r) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1484,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1485 ierr = PetscFree(buf_ri[0])((*PetscTrFree)((void*)(buf_ri[0]),1485,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((buf_ri[0]) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1485,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1486 ierr = PetscFree(buf_ri)((*PetscTrFree)((void*)(buf_ri),1486,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((buf_ri) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1486,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1487 ierr = PetscFree(buf_rj[0])((*PetscTrFree)((void*)(buf_rj[0]),1487,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((buf_rj[0]) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1487,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1488 ierr = PetscFree(buf_rj)((*PetscTrFree)((void*)(buf_rj),1488,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((buf_rj) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1488,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1489 ierr = PetscLayoutDestroy(&rowmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1489,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1490
1491 /* attach the supporting struct to Cmpi for reuse */
1492 c = (Mat_MPIAIJ*)Cmpi->data;
1493 c->ap = ptap;
1494 ptap->destroy = Cmpi->ops->destroy;
1495
1496 /* Cmpi is not ready for use - assembly will be done by MatPtAPNumeric() */
1497 Cmpi->assembled = PETSC_FALSE;
1498 Cmpi->ops->destroy = MatDestroy_MPIAIJ_PtAP;
1499 Cmpi->ops->freeintermediatedatastructures = MatFreeIntermediateDataStructures_MPIAIJ_AP;
1500
1501 *C = Cmpi;
1502 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1503}
1504
1505PetscErrorCode MatTransposeMatMultNumeric_MPIAIJ_MPIAIJ_nonscalable(Mat P,Mat A,Mat C)
1506{
1507 PetscErrorCode ierr;
1508 Mat_MPIAIJ *p=(Mat_MPIAIJ*)P->data,*c=(Mat_MPIAIJ*)C->data;
1509 Mat_SeqAIJ *c_seq;
1510 Mat_APMPI *ptap = c->ap;
1511 Mat A_loc,C_loc,C_oth;
1512 PetscInt i,rstart,rend,cm,ncols,row;
1513 const PetscInt *cols;
1514 const PetscScalar *vals;
1515
1516 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 1516; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1517 if (!ptap->A_loc) {
1518 MPI_Comm comm;
1519 ierr = PetscObjectGetComm((PetscObject)C,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1519,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1520 SETERRQ(comm,PETSC_ERR_ARG_WRONGSTATE,"PtA cannot be reused. Do not call MatFreeIntermediateDataStructures() or use '-mat_freeintermediatedatastructures'")return PetscError(comm,1520,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,73,PETSC_ERROR_INITIAL,"PtA cannot be reused. Do not call MatFreeIntermediateDataStructures() or use '-mat_freeintermediatedatastructures'"
);
1521 }
1522
1523 ierr = MatZeroEntries(C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1523,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1524
1525 if (ptap->reuse == MAT_REUSE_MATRIX) {
1526 /* These matrices are obtained in MatTransposeMatMultSymbolic() */
1527 /* 1) get R = Pd^T, Ro = Po^T */
1528 /*----------------------------*/
1529 ierr = MatTranspose_SeqAIJ(p->A,MAT_REUSE_MATRIX,&ptap->Rd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1529,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1530 ierr = MatTranspose_SeqAIJ(p->B,MAT_REUSE_MATRIX,&ptap->Ro);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1530,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1531
1532 /* 2) compute numeric A_loc */
1533 /*--------------------------*/
1534 ierr = MatMPIAIJGetLocalMat(A,MAT_REUSE_MATRIX,&ptap->A_loc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1534,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1535 }
1536
1537 /* 3) C_loc = Rd*A_loc, C_oth = Ro*A_loc */
1538 A_loc = ptap->A_loc;
1539 ierr = ((ptap->C_loc)->ops->matmultnumeric)(ptap->Rd,A_loc,ptap->C_loc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1539,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1540 ierr = ((ptap->C_oth)->ops->matmultnumeric)(ptap->Ro,A_loc,ptap->C_oth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1540,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1541 C_loc = ptap->C_loc;
1542 C_oth = ptap->C_oth;
1543
1544 /* add C_loc and Co to to C */
1545 ierr = MatGetOwnershipRange(C,&rstart,&rend);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1545,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1546
1547 /* C_loc -> C */
1548 cm = C_loc->rmap->N;
1549 c_seq = (Mat_SeqAIJ*)C_loc->data;
1550 cols = c_seq->j;
1551 vals = c_seq->a;
1552 for (i=0; i<cm; i++) {
1553 ncols = c_seq->i[i+1] - c_seq->i[i];
1554 row = rstart + i;
1555 ierr = MatSetValues(C,1,&row,ncols,cols,vals,ADD_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1555,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1556 cols += ncols; vals += ncols;
1557 }
1558
1559 /* Co -> C, off-processor part */
1560 cm = C_oth->rmap->N;
1561 c_seq = (Mat_SeqAIJ*)C_oth->data;
1562 cols = c_seq->j;
1563 vals = c_seq->a;
1564 for (i=0; i<cm; i++) {
1565 ncols = c_seq->i[i+1] - c_seq->i[i];
1566 row = p->garray[i];
1567 ierr = MatSetValues(C,1,&row,ncols,cols,vals,ADD_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1567,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1568 cols += ncols; vals += ncols;
1569 }
1570 ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1570,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1571 ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1571,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1572
1573 ptap->reuse = MAT_REUSE_MATRIX;
1574
1575 /* supporting struct ptap consumes almost same amount of memory as C=PtAP, release it if C will not be updated by A and P */
1576 if (ptap->freestruct) {
1577 ierr = MatFreeIntermediateDataStructures(C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1577,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1578 }
1579 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1580}
1581
1582PetscErrorCode MatTransposeMatMultNumeric_MPIAIJ_MPIAIJ(Mat P,Mat A,Mat C)
1583{
1584 PetscErrorCode ierr;
1585 Mat_Merge_SeqsToMPI *merge;
1586 Mat_MPIAIJ *p =(Mat_MPIAIJ*)P->data,*c=(Mat_MPIAIJ*)C->data;
1587 Mat_SeqAIJ *pd=(Mat_SeqAIJ*)(p->A)->data,*po=(Mat_SeqAIJ*)(p->B)->data;
1588 Mat_APMPI *ptap;
1589 PetscInt *adj;
1590 PetscInt i,j,k,anz,pnz,row,*cj,nexta;
1591 MatScalar *ada,*ca,valtmp;
1592 PetscInt am =A->rmap->n,cm=C->rmap->n,pon=(p->B)->cmap->n;
1593 MPI_Comm comm;
1594 PetscMPIInt size,rank,taga,*len_s;
1595 PetscInt *owners,proc,nrows,**buf_ri_k,**nextrow,**nextci;
1596 PetscInt **buf_ri,**buf_rj;
1597 PetscInt cnz=0,*bj_i,*bi,*bj,bnz,nextcj; /* bi,bj,ba: local array of C(mpi mat) */
1598 MPI_Request *s_waits,*r_waits;
1599 MPI_Status *status;
1600 MatScalar **abuf_r,*ba_i,*pA,*coa,*ba;
1601 PetscInt *ai,*aj,*coi,*coj,*poJ,*pdJ;
1602 Mat A_loc;
1603 Mat_SeqAIJ *a_loc;
1604
1605 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 1605; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1606 ierr = PetscObjectGetComm((PetscObject)C,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1606,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1607 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1607,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1608 ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1608,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1609
1610 ptap = c->ap;
1611 if (!ptap->A_loc) SETERRQ(comm,PETSC_ERR_ARG_WRONGSTATE,"PtA cannot be reused. Do not call MatFreeIntermediateDataStructures() or use '-mat_freeintermediatedatastructures'")return PetscError(comm,1611,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,73,PETSC_ERROR_INITIAL,"PtA cannot be reused. Do not call MatFreeIntermediateDataStructures() or use '-mat_freeintermediatedatastructures'"
);
1612 merge = ptap->merge;
1613
1614 /* 2) compute numeric C_seq = P_loc^T*A_loc */
1615 /*------------------------------------------*/
1616 /* get data from symbolic products */
1617 coi = merge->coi; coj = merge->coj;
1618 ierr = PetscCalloc1(coi[pon]+1,&coa)PetscMallocA(1,PETSC_TRUE,1618,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(coi[pon]+1)*sizeof(**(&coa)),(&coa));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1618,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1619 bi = merge->bi; bj = merge->bj;
1620 owners = merge->rowmap->range;
1621 ierr = PetscCalloc1(bi[cm]+1,&ba)PetscMallocA(1,PETSC_TRUE,1621,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(bi[cm]+1)*sizeof(**(&ba)),(&ba));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1621,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1622
1623 /* get A_loc by taking all local rows of A */
1624 A_loc = ptap->A_loc;
1625 ierr = MatMPIAIJGetLocalMat(A,MAT_REUSE_MATRIX,&A_loc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1625,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1626 a_loc = (Mat_SeqAIJ*)(A_loc)->data;
1627 ai = a_loc->i;
1628 aj = a_loc->j;
1629
1630 for (i=0; i<am; i++) {
1631 anz = ai[i+1] - ai[i];
1632 adj = aj + ai[i];
1633 ada = a_loc->a + ai[i];
1634
1635 /* 2-b) Compute Cseq = P_loc[i,:]^T*A[i,:] using outer product */
1636 /*-------------------------------------------------------------*/
1637 /* put the value into Co=(p->B)^T*A (off-diagonal part, send to others) */
1638 pnz = po->i[i+1] - po->i[i];
1639 poJ = po->j + po->i[i];
1640 pA = po->a + po->i[i];
1641 for (j=0; j<pnz; j++) {
1642 row = poJ[j];
1643 cj = coj + coi[row];
1644 ca = coa + coi[row];
1645 /* perform sparse axpy */
1646 nexta = 0;
1647 valtmp = pA[j];
1648 for (k=0; nexta<anz; k++) {
1649 if (cj[k] == adj[nexta]) {
1650 ca[k] += valtmp*ada[nexta];
1651 nexta++;
1652 }
1653 }
1654 ierr = PetscLogFlops(2.0*anz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1654,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1655 }
1656
1657 /* put the value into Cd (diagonal part) */
1658 pnz = pd->i[i+1] - pd->i[i];
1659 pdJ = pd->j + pd->i[i];
1660 pA = pd->a + pd->i[i];
1661 for (j=0; j<pnz; j++) {
1662 row = pdJ[j];
1663 cj = bj + bi[row];
1664 ca = ba + bi[row];
1665 /* perform sparse axpy */
1666 nexta = 0;
1667 valtmp = pA[j];
1668 for (k=0; nexta<anz; k++) {
1669 if (cj[k] == adj[nexta]) {
1670 ca[k] += valtmp*ada[nexta];
1671 nexta++;
1672 }
1673 }
1674 ierr = PetscLogFlops(2.0*anz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1674,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1675 }
1676 }
1677
1678 /* 3) send and recv matrix values coa */
1679 /*------------------------------------*/
1680 buf_ri = merge->buf_ri;
1681 buf_rj = merge->buf_rj;
1682 len_s = merge->len_s;
1683 ierr = PetscCommGetNewTag(comm,&taga);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1683,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1684 ierr = PetscPostIrecvScalar(comm,taga,merge->nrecv,merge->id_r,merge->len_r,&abuf_r,&r_waits);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1684,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1685
1686 ierr = PetscMalloc2(merge->nsend+1,&s_waits,size,&status)PetscMallocA(2,PETSC_FALSE,1686,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(merge->nsend+1)*sizeof(**(&s_waits)),(&s_waits
),(size_t)(size)*sizeof(**(&status)),(&status));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1686,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1687 for (proc=0,k=0; proc<size; proc++) {
1688 if (!len_s[proc]) continue;
1689 i = merge->owners_co[proc];
1690 ierr = MPI_Isend(coa+coi[i],len_s[proc],MPIU_MATSCALAR,proc,taga,comm,s_waits+k)((petsc_isend_ct++,0) || PetscMPITypeSize(&(petsc_isend_len
),(len_s[proc]),(((MPI_Datatype)0x4c00080b))) || MPI_Isend((coa
+coi[i]),(len_s[proc]),(((MPI_Datatype)0x4c00080b)),(proc),(taga
),(comm),(s_waits+k)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1690,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1691 k++;
1692 }
1693 if (merge->nrecv) {ierr = MPI_Waitall(merge->nrecv,r_waits,status)((petsc_wait_all_ct++,petsc_sum_of_waits_ct += (PetscLogDouble
) (merge->nrecv),0) || MPI_Waitall((merge->nrecv),(r_waits
),(status)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1693,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1694 if (merge->nsend) {ierr = MPI_Waitall(merge->nsend,s_waits,status)((petsc_wait_all_ct++,petsc_sum_of_waits_ct += (PetscLogDouble
) (merge->nsend),0) || MPI_Waitall((merge->nsend),(s_waits
),(status)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1694,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1695
1696 ierr = PetscFree2(s_waits,status)PetscFreeA(2,1696,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,&(s_waits),&(status));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1696,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1697 ierr = PetscFree(r_waits)((*PetscTrFree)((void*)(r_waits),1697,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((r_waits) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1697,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1698 ierr = PetscFree(coa)((*PetscTrFree)((void*)(coa),1698,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((coa) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1698,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1699
1700 /* 4) insert local Cseq and received values into Cmpi */
1701 /*----------------------------------------------------*/
1702 ierr = PetscMalloc3(merge->nrecv,&buf_ri_k,merge->nrecv,&nextrow,merge->nrecv,&nextci)PetscMallocA(3,PETSC_FALSE,1702,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(merge->nrecv)*sizeof(**(&buf_ri_k)),(&buf_ri_k
),(size_t)(merge->nrecv)*sizeof(**(&nextrow)),(&nextrow
),(size_t)(merge->nrecv)*sizeof(**(&nextci)),(&nextci
));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1702,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1703 for (k=0; k<merge->nrecv; k++) {
1704 buf_ri_k[k] = buf_ri[k]; /* beginning of k-th recved i-structure */
1705 nrows = *(buf_ri_k[k]);
1706 nextrow[k] = buf_ri_k[k]+1; /* next row number of k-th recved i-structure */
1707 nextci[k] = buf_ri_k[k] + (nrows + 1); /* poins to the next i-structure of k-th recved i-structure */
1708 }
1709
1710 for (i=0; i<cm; i++) {
1711 row = owners[rank] + i; /* global row index of C_seq */
1712 bj_i = bj + bi[i]; /* col indices of the i-th row of C */
1713 ba_i = ba + bi[i];
1714 bnz = bi[i+1] - bi[i];
1715 /* add received vals into ba */
1716 for (k=0; k<merge->nrecv; k++) { /* k-th received message */
1717 /* i-th row */
1718 if (i == *nextrow[k]) {
1719 cnz = *(nextci[k]+1) - *nextci[k];
1720 cj = buf_rj[k] + *(nextci[k]);
1721 ca = abuf_r[k] + *(nextci[k]);
1722 nextcj = 0;
1723 for (j=0; nextcj<cnz; j++) {
1724 if (bj_i[j] == cj[nextcj]) { /* bcol == ccol */
1725 ba_i[j] += ca[nextcj++];
1726 }
1727 }
1728 nextrow[k]++; nextci[k]++;
1729 ierr = PetscLogFlops(2.0*cnz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1729,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1730 }
1731 }
1732 ierr = MatSetValues(C,1,&row,bnz,bj_i,ba_i,INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1732,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1733 }
1734 ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1734,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1735 ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1735,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1736
1737 ierr = PetscFree(ba)((*PetscTrFree)((void*)(ba),1737,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((ba) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1737,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1738 ierr = PetscFree(abuf_r[0])((*PetscTrFree)((void*)(abuf_r[0]),1738,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((abuf_r[0]) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1738,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1739 ierr = PetscFree(abuf_r)((*PetscTrFree)((void*)(abuf_r),1739,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((abuf_r) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1739,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1740 ierr = PetscFree3(buf_ri_k,nextrow,nextci)PetscFreeA(3,1740,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,&(buf_ri_k),&(nextrow),&(nextci));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1740,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1741
1742 if (ptap->freestruct) {
1743 ierr = MatFreeIntermediateDataStructures(C);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1743,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1744 }
1745 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
1746}
1747
1748PetscErrorCode MatTransposeMatMultSymbolic_MPIAIJ_MPIAIJ(Mat P,Mat A,PetscReal fill,Mat *C)
1749{
1750 PetscErrorCode ierr;
1751 Mat Cmpi,A_loc,POt,PDt;
1752 Mat_APMPI *ptap;
1753 PetscFreeSpaceList free_space=NULL((void*)0),current_space=NULL((void*)0);
1754 Mat_MPIAIJ *p=(Mat_MPIAIJ*)P->data,*a=(Mat_MPIAIJ*)A->data,*c;
1755 PetscInt *pdti,*pdtj,*poti,*potj,*ptJ;
1756 PetscInt nnz;
1757 PetscInt *lnk,*owners_co,*coi,*coj,i,k,pnz,row;
1758 PetscInt am =A->rmap->n,pn=P->cmap->n;
1759 MPI_Comm comm;
1760 PetscMPIInt size,rank,tagi,tagj,*len_si,*len_s,*len_ri;
1761 PetscInt **buf_rj,**buf_ri,**buf_ri_k;
1762 PetscInt len,proc,*dnz,*onz,*owners;
1763 PetscInt nzi,*bi,*bj;
1764 PetscInt nrows,*buf_s,*buf_si,*buf_si_i,**nextrow,**nextci;
1765 MPI_Request *swaits,*rwaits;
1766 MPI_Status *sstatus,rstatus;
1767 Mat_Merge_SeqsToMPI *merge;
1768 PetscInt *ai,*aj,*Jptr,anz,*prmap=p->garray,pon,nspacedouble=0,j;
1769 PetscReal afill =1.0,afill_tmp;
1770 PetscInt rstart = P->cmap->rstart,rmax,aN=A->cmap->N,Armax;
1771 Mat_SeqAIJ *a_loc,*pdt,*pot;
1772 PetscTable ta;
1773 MatType mtype;
1774
1775 PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
; petscstack->line[petscstack->currentsize] = 1775; petscstack
->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);
1776 ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1776,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1777 /* check if matrix local sizes are compatible */
1778 if (A->rmap->rstart != P->rmap->rstart || A->rmap->rend != P->rmap->rend) SETERRQ4(comm,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%D, %D) != P (%D,%D)",A->rmap->rstart,A->rmap->rend,P->rmap->rstart,P->rmap->rend)return PetscError(comm,1778,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,60,PETSC_ERROR_INITIAL,"Matrix local dimensions are incompatible, A (%D, %D) != P (%D,%D)"
,A->rmap->rstart,A->rmap->rend,P->rmap->rstart
,P->rmap->rend);
1779
1780 ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1780,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1781 ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1781,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1782
1783 /* create struct Mat_APMPI and attached it to C later */
1784 ierr = PetscNew(&ptap)PetscMallocA(1,PETSC_TRUE,1784,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(1)*sizeof(**((&ptap))),((&ptap)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1784,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1785
1786 /* get A_loc by taking all local rows of A */
1787 ierr = MatMPIAIJGetLocalMat(A,MAT_INITIAL_MATRIX,&A_loc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1787,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1788
1789 ptap->A_loc = A_loc;
1790 a_loc = (Mat_SeqAIJ*)(A_loc)->data;
1791 ai = a_loc->i;
1792 aj = a_loc->j;
1793
1794 /* determine symbolic Co=(p->B)^T*A - send to others */
1795 /*----------------------------------------------------*/
1796 ierr = MatTransposeSymbolic_SeqAIJ(p->A,&PDt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1796,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1797 pdt = (Mat_SeqAIJ*)PDt->data;
1798 pdti = pdt->i; pdtj = pdt->j;
1799
1800 ierr = MatTransposeSymbolic_SeqAIJ(p->B,&POt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1800,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1801 pot = (Mat_SeqAIJ*)POt->data;
1802 poti = pot->i; potj = pot->j;
1803
1804 /* then, compute symbolic Co = (p->B)^T*A */
1805 pon = (p->B)->cmap->n; /* total num of rows to be sent to other processors
1806 >= (num of nonzero rows of C_seq) - pn */
1807 ierr = PetscMalloc1(pon+1,&coi)PetscMallocA(1,PETSC_FALSE,1807,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(pon+1)*sizeof(**(&coi)),(&coi));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1807,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1808 coi[0] = 0;
1809
1810 /* set initial free space to be fill*(nnz(p->B) + nnz(A)) */
1811 nnz = PetscRealIntMultTruncate(fill,PetscIntSumTruncate(poti[pon],ai[am]));
1812 ierr = PetscFreeSpaceGet(nnz,&free_space);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1812,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1813 current_space = free_space;
1814
1815 /* create and initialize a linked list */
1816 ierr = PetscTableCreate(A->cmap->n + a->B->cmap->N,aN,&ta);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1816,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1817 MatRowMergeMax_SeqAIJ(a_loc,am,ta){ PetscInt _j,_row,_nz,*_col; if (a_loc) { for (_row=0; _row<
am; _row++) { _nz = a_loc->i[_row+1] - a_loc->i[_row]; for
(_j=0; _j<_nz; _j++) { _col = _j + a_loc->j + a_loc->
i[_row]; PetscTableAdd(ta,*_col+1,1,INSERT_VALUES); } } } };
1818 ierr = PetscTableGetCount(ta,&Armax);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1818,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1819
1820 ierr = PetscLLCondensedCreate_Scalable(Armax,&lnk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1820,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1821
1822 for (i=0; i<pon; i++) {
1823 pnz = poti[i+1] - poti[i];
1824 ptJ = potj + poti[i];
1825 for (j=0; j<pnz; j++) {
1826 row = ptJ[j]; /* row of A_loc == col of Pot */
1827 anz = ai[row+1] - ai[row];
1828 Jptr = aj + ai[row];
1829 /* add non-zero cols of AP into the sorted linked list lnk */
1830 ierr = PetscLLCondensedAddSorted_Scalable(anz,Jptr,lnk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1830,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1831 }
1832 nnz = lnk[0];
1833
1834 /* If free space is not available, double the total space in the list */
1835 if (current_space->local_remaining<nnz) {
1836 ierr = PetscFreeSpaceGet(PetscIntSumTruncate(nnz,current_space->total_array_size),&current_space);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1836,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1837 nspacedouble++;
1838 }
1839
1840 /* Copy data into free space, and zero out denserows */
1841 ierr = PetscLLCondensedClean_Scalable(nnz,current_space->array,lnk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1841,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1842
1843 current_space->array += nnz;
1844 current_space->local_used += nnz;
1845 current_space->local_remaining -= nnz;
1846
1847 coi[i+1] = coi[i] + nnz;
1848 }
1849
1850 ierr = PetscMalloc1(coi[pon]+1,&coj)PetscMallocA(1,PETSC_FALSE,1850,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(coi[pon]+1)*sizeof(**(&coj)),(&coj));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1850,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1851 ierr = PetscFreeSpaceContiguous(&free_space,coj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1851,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1852 ierr = PetscLLCondensedDestroy_Scalable(lnk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1852,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0); /* must destroy to get a new one for C */
1853
1854 afill_tmp = (PetscReal)coi[pon]/(poti[pon] + ai[am]+1);
1855 if (afill_tmp > afill) afill = afill_tmp;
1856
1857 /* send j-array (coj) of Co to other processors */
1858 /*----------------------------------------------*/
1859 /* determine row ownership */
1860 ierr = PetscNew(&merge)PetscMallocA(1,PETSC_TRUE,1860,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(1)*sizeof(**((&merge))),((&merge)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1860,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1861 ierr = PetscLayoutCreate(comm,&merge->rowmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1861,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1862
1863 merge->rowmap->n = pn;
1864 merge->rowmap->bs = 1;
1865
1866 ierr = PetscLayoutSetUp(merge->rowmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1866,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1867 owners = merge->rowmap->range;
1868
1869 /* determine the number of messages to send, their lengths */
1870 ierr = PetscCalloc1(size,&len_si)PetscMallocA(1,PETSC_TRUE,1870,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(size)*sizeof(**(&len_si)),(&len_si));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1870,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1871 ierr = PetscCalloc1(size,&merge->len_s)PetscMallocA(1,PETSC_TRUE,1871,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(size)*sizeof(**(&merge->len_s)),(&merge->
len_s));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1871,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1872
1873 len_s = merge->len_s;
1874 merge->nsend = 0;
1875
1876 ierr = PetscMalloc1(size+2,&owners_co)PetscMallocA(1,PETSC_FALSE,1876,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(size+2)*sizeof(**(&owners_co)),(&owners_co)
);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1876,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1877
1878 proc = 0;
1879 for (i=0; i<pon; i++) {
1880 while (prmap[i] >= owners[proc+1]) proc++;
1881 len_si[proc]++; /* num of rows in Co to be sent to [proc] */
1882 len_s[proc] += coi[i+1] - coi[i];
1883 }
1884
1885 len = 0; /* max length of buf_si[] */
1886 owners_co[0] = 0;
1887 for (proc=0; proc<size; proc++) {
1888 owners_co[proc+1] = owners_co[proc] + len_si[proc];
1889 if (len_si[proc]) {
1890 merge->nsend++;
1891 len_si[proc] = 2*(len_si[proc] + 1);
1892 len += len_si[proc];
1893 }
1894 }
1895
1896 /* determine the number and length of messages to receive for coi and coj */
1897 ierr = PetscGatherNumberOfMessages(comm,NULL((void*)0),len_s,&merge->nrecv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1897,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1898 ierr = PetscGatherMessageLengths2(comm,merge->nsend,merge->nrecv,len_s,len_si,&merge->id_r,&merge->len_r,&len_ri);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1898,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1899
1900 /* post the Irecv and Isend of coj */
1901 ierr = PetscCommGetNewTag(comm,&tagj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1901,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1902 ierr = PetscPostIrecvInt(comm,tagj,merge->nrecv,merge->id_r,merge->len_r,&buf_rj,&rwaits);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1902,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1903 ierr = PetscMalloc1(merge->nsend+1,&swaits)PetscMallocA(1,PETSC_FALSE,1903,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(merge->nsend+1)*sizeof(**(&swaits)),(&swaits
));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1903,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1904 for (proc=0, k=0; proc<size; proc++) {
1905 if (!len_s[proc]) continue;
1906 i = owners_co[proc];
1907 ierr = MPI_Isend(coj+coi[i],len_s[proc],MPIU_INT,proc,tagj,comm,swaits+k)((petsc_isend_ct++,0) || PetscMPITypeSize(&(petsc_isend_len
),(len_s[proc]),(((MPI_Datatype)0x4c000405))) || MPI_Isend((coj
+coi[i]),(len_s[proc]),(((MPI_Datatype)0x4c000405)),(proc),(tagj
),(comm),(swaits+k)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1907,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1908 k++;
1909 }
1910
1911 /* receives and sends of coj are complete */
1912 ierr = PetscMalloc1(size,&sstatus)PetscMallocA(1,PETSC_FALSE,1912,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(size)*sizeof(**(&sstatus)),(&sstatus));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1912,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1913 for (i=0; i<merge->nrecv; i++) {
1914 PetscMPIInt icompleted;
1915 ierr = MPI_Waitany(merge->nrecv,rwaits,&icompleted,&rstatus)((petsc_wait_any_ct++,petsc_sum_of_waits_ct++,0) || MPI_Waitany
((merge->nrecv),(rwaits),(&icompleted),(&rstatus))
);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1915,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1916 }
1917 ierr = PetscFree(rwaits)((*PetscTrFree)((void*)(rwaits),1917,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((rwaits) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1917,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1918 if (merge->nsend) {ierr = MPI_Waitall(merge->nsend,swaits,sstatus)((petsc_wait_all_ct++,petsc_sum_of_waits_ct += (PetscLogDouble
) (merge->nsend),0) || MPI_Waitall((merge->nsend),(swaits
),(sstatus)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1918,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1919
1920 /* add received column indices into table to update Armax */
1921 /* Armax can be as large as aN if a P[row,:] is dense, see src/ksp/ksp/examples/tutorials/ex56.c! */
1922 for (k=0; k<merge->nrecv; k++) {/* k-th received message */
1923 Jptr = buf_rj[k];
1924 for (j=0; j<merge->len_r[k]; j++) {
1925 ierr = PetscTableAdd(ta,*(Jptr+j)+1,1,INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1925,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1926 }
1927 }
1928 ierr = PetscTableGetCount(ta,&Armax);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1928,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1929 /* printf("Armax %d, an %d + Bn %d = %d, aN %d\n",Armax,A->cmap->n,a->B->cmap->N,A->cmap->n+a->B->cmap->N,aN); */
1930
1931 /* send and recv coi */
1932 /*-------------------*/
1933 ierr = PetscCommGetNewTag(comm,&tagi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1933,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1934 ierr = PetscPostIrecvInt(comm,tagi,merge->nrecv,merge->id_r,len_ri,&buf_ri,&rwaits);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1934,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1935 ierr = PetscMalloc1(len+1,&buf_s)PetscMallocA(1,PETSC_FALSE,1935,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(len+1)*sizeof(**(&buf_s)),(&buf_s));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1935,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1936 buf_si = buf_s; /* points to the beginning of k-th msg to be sent */
1937 for (proc=0,k=0; proc<size; proc++) {
1938 if (!len_s[proc]) continue;
1939 /* form outgoing message for i-structure:
1940 buf_si[0]: nrows to be sent
1941 [1:nrows]: row index (global)
1942 [nrows+1:2*nrows+1]: i-structure index
1943 */
1944 /*-------------------------------------------*/
1945 nrows = len_si[proc]/2 - 1;
1946 buf_si_i = buf_si + nrows+1;
1947 buf_si[0] = nrows;
1948 buf_si_i[0] = 0;
1949 nrows = 0;
1950 for (i=owners_co[proc]; i<owners_co[proc+1]; i++) {
1951 nzi = coi[i+1] - coi[i];
1952 buf_si_i[nrows+1] = buf_si_i[nrows] + nzi; /* i-structure */
1953 buf_si[nrows+1] = prmap[i] -owners[proc]; /* local row index */
1954 nrows++;
1955 }
1956 ierr = MPI_Isend(buf_si,len_si[proc],MPIU_INT,proc,tagi,comm,swaits+k)((petsc_isend_ct++,0) || PetscMPITypeSize(&(petsc_isend_len
),(len_si[proc]),(((MPI_Datatype)0x4c000405))) || MPI_Isend((
buf_si),(len_si[proc]),(((MPI_Datatype)0x4c000405)),(proc),(tagi
),(comm),(swaits+k)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1956,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1957 k++;
1958 buf_si += len_si[proc];
1959 }
1960 i = merge->nrecv;
1961 while (i--) {
1962 PetscMPIInt icompleted;
1963 ierr = MPI_Waitany(merge->nrecv,rwaits,&icompleted,&rstatus)((petsc_wait_any_ct++,petsc_sum_of_waits_ct++,0) || MPI_Waitany
((merge->nrecv),(rwaits),(&icompleted),(&rstatus))
);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1963,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1964 }
1965 ierr = PetscFree(rwaits)((*PetscTrFree)((void*)(rwaits),1965,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((rwaits) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1965,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1966 if (merge->nsend) {ierr = MPI_Waitall(merge->nsend,swaits,sstatus)((petsc_wait_all_ct++,petsc_sum_of_waits_ct += (PetscLogDouble
) (merge->nsend),0) || MPI_Waitall((merge->nsend),(swaits
),(sstatus)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1966,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}
1967 ierr = PetscFree(len_si)((*PetscTrFree)((void*)(len_si),1967,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((len_si) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1967,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1968 ierr = PetscFree(len_ri)((*PetscTrFree)((void*)(len_ri),1968,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((len_ri) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1968,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1969 ierr = PetscFree(swaits)((*PetscTrFree)((void*)(swaits),1969,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((swaits) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1969,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1970 ierr = PetscFree(sstatus)((*PetscTrFree)((void*)(sstatus),1970,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((sstatus) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1970,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1971 ierr = PetscFree(buf_s)((*PetscTrFree)((void*)(buf_s),1971,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
) || ((buf_s) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1971,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1972
1973 /* compute the local portion of C (mpi mat) */
1974 /*------------------------------------------*/
1975 /* allocate bi array and free space for accumulating nonzero column info */
1976 ierr = PetscMalloc1(pn+1,&bi)PetscMallocA(1,PETSC_FALSE,1976,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(pn+1)*sizeof(**(&bi)),(&bi));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1976,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1977 bi[0] = 0;
1978
1979 /* set initial free space to be fill*(nnz(P) + nnz(AP)) */
1980 nnz = PetscRealIntMultTruncate(fill,PetscIntSumTruncate(pdti[pn],PetscIntSumTruncate(poti[pon],ai[am])));
1981 ierr = PetscFreeSpaceGet(nnz,&free_space);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1981,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1982 current_space = free_space;
1983
1984 ierr = PetscMalloc3(merge->nrecv,&buf_ri_k,merge->nrecv,&nextrow,merge->nrecv,&nextci)PetscMallocA(3,PETSC_FALSE,1984,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(merge->nrecv)*sizeof(**(&buf_ri_k)),(&buf_ri_k
),(size_t)(merge->nrecv)*sizeof(**(&nextrow)),(&nextrow
),(size_t)(merge->nrecv)*sizeof(**(&nextci)),(&nextci
));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1984,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1985 for (k=0; k<merge->nrecv; k++) {
1986 buf_ri_k[k] = buf_ri[k]; /* beginning of k-th recved i-structure */
1987 nrows = *buf_ri_k[k];
1988 nextrow[k] = buf_ri_k[k] + 1; /* next row number of k-th recved i-structure */
1989 nextci[k] = buf_ri_k[k] + (nrows + 1); /* points to the next i-structure of k-th recieved i-structure */
1990 }
1991
1992 ierr = PetscLLCondensedCreate_Scalable(Armax,&lnk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1992,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1993 ierr = MatPreallocateInitialize(comm,pn,A->cmap->n,dnz,onz)0; do { PetscErrorCode _4_ierr; PetscInt __nrows = (pn),__ncols
= (A->cmap->n),__rstart,__start,__end; _4_ierr = PetscMallocA
(2,PETSC_TRUE,1993,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)((size_t)__nrows)*sizeof(**(&dnz)),(&dnz),(size_t
)((size_t)__nrows)*sizeof(**(&onz)),(&onz));do {if (__builtin_expect
(!!(_4_ierr),0)) return PetscError(((MPI_Comm)0x44000001),1993
,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __start = 0; __end
= __start; _4_ierr = MPI_Scan(&__ncols,&__end,1,((MPI_Datatype
)0x4c000405),(MPI_Op)(0x58000003),comm);do {if (__builtin_expect
(!!(_4_ierr),0)) return PetscError(((MPI_Comm)0x44000001),1993
,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __start = __end
- __ncols; _4_ierr = MPI_Scan(&__nrows,&__rstart,1,(
(MPI_Datatype)0x4c000405),(MPI_Op)(0x58000003),comm);do {if (
__builtin_expect(!!(_4_ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1993,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __rstart = __rstart
- __nrows; do { } while(0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1993,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
1994 rmax = 0;
1995 for (i=0; i<pn; i++) {
1996 /* add pdt[i,:]*AP into lnk */
1997 pnz = pdti[i+1] - pdti[i];
1998 ptJ = pdtj + pdti[i];
1999 for (j=0; j<pnz; j++) {
2000 row = ptJ[j]; /* row of AP == col of Pt */
2001 anz = ai[row+1] - ai[row];
2002 Jptr = aj + ai[row];
2003 /* add non-zero cols of AP into the sorted linked list lnk */
2004 ierr = PetscLLCondensedAddSorted_Scalable(anz,Jptr,lnk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2004,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2005 }
2006
2007 /* add received col data into lnk */
2008 for (k=0; k<merge->nrecv; k++) { /* k-th received message */
2009 if (i == *nextrow[k]) { /* i-th row */
2010 nzi = *(nextci[k]+1) - *nextci[k];
2011 Jptr = buf_rj[k] + *nextci[k];
2012 ierr = PetscLLCondensedAddSorted_Scalable(nzi,Jptr,lnk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2012,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2013 nextrow[k]++; nextci[k]++;
2014 }
2015 }
2016 nnz = lnk[0];
2017
2018 /* if free space is not available, make more free space */
2019 if (current_space->local_remaining<nnz) {
2020 ierr = PetscFreeSpaceGet(PetscIntSumTruncate(nnz,current_space->total_array_size),&current_space);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2020,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2021 nspacedouble++;
2022 }
2023 /* copy data into free space, then initialize lnk */
2024 ierr = PetscLLCondensedClean_Scalable(nnz,current_space->array,lnk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2024,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2025 ierr = MatPreallocateSet(i+owners[rank],nnz,current_space->array,dnz,onz)0;do { PetscInt __i; if (i+owners[rank] < __rstart) return
PetscError(((MPI_Comm)0x44000001),2025,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,63,PETSC_ERROR_INITIAL,"Trying to set preallocation for row %D less than first local row %D"
,i+owners[rank],__rstart); if (i+owners[rank] >= __rstart+
__nrows) return PetscError(((MPI_Comm)0x44000001),2025,__func__
,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,63,PETSC_ERROR_INITIAL,"Trying to set preallocation for row %D greater than last local row %D"
,i+owners[rank],__rstart+__nrows-1); for (__i=0; __i<nnz; __i
++) { if ((current_space->array)[__i] < __start || (current_space
->array)[__i] >= __end) onz[i+owners[rank] - __rstart]++
; else if (dnz[i+owners[rank] - __rstart] < __ncols) dnz[i
+owners[rank] - __rstart]++; }} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2025,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2026
2027 current_space->array += nnz;
2028 current_space->local_used += nnz;
2029 current_space->local_remaining -= nnz;
2030
2031 bi[i+1] = bi[i] + nnz;
2032 if (nnz > rmax) rmax = nnz;
2033 }
2034 ierr = PetscFree3(buf_ri_k,nextrow,nextci)PetscFreeA(3,2034,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,&(buf_ri_k),&(nextrow),&(nextci));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2034,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2035
2036 ierr = PetscMalloc1(bi[pn]+1,&bj)PetscMallocA(1,PETSC_FALSE,2036,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,(size_t)(bi[pn]+1)*sizeof(**(&bj)),(&bj));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2036,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2037 ierr = PetscFreeSpaceContiguous(&free_space,bj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2037,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2038 afill_tmp = (PetscReal)bi[pn]/(pdti[pn] + poti[pon] + ai[am]+1);
2039 if (afill_tmp > afill) afill = afill_tmp;
2040 ierr = PetscLLCondensedDestroy_Scalable(lnk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2040,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2041 ierr = PetscTableDestroy(&ta);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2041,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2042
2043 ierr = MatDestroy(&POt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2043,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2044 ierr = MatDestroy(&PDt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2044,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2045
2046 /* create symbolic parallel matrix Cmpi - why cannot be assembled in Numeric part */
2047 /*----------------------------------------------------------------------------------*/
2048 ierr = MatCreate(comm,&Cmpi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2048,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2049 ierr = MatSetSizes(Cmpi,pn,A->cmap->n,PETSC_DETERMINE-1,PETSC_DETERMINE-1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2049,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2050 ierr = MatSetBlockSizes(Cmpi,PetscAbs(P->cmap->bs)(((P->cmap->bs) >= 0) ? (P->cmap->bs) : (-(P->
cmap->bs))),PetscAbs(A->cmap->bs)(((A->cmap->bs) >= 0) ? (A->cmap->bs) : (-(A->
cmap->bs))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2050,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2051 ierr = MatGetType(A,&mtype);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2051,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2052 ierr = MatSetType(Cmpi,mtype);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2052,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2053 ierr = MatMPIAIJSetPreallocation(Cmpi,0,dnz,0,onz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2053,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2054 ierr = MatPreallocateFinalize(dnz,onz)0;_4_ierr = PetscFreeA(2,2054,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,&(dnz),&(onz));do {if (__builtin_expect(!!(_4_ierr),
0)) return PetscError(((MPI_Comm)0x44000001),2054,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0);} while(0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2054,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2055 ierr = MatSetBlockSize(Cmpi,1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2055,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2056 for (i=0; i<pn; i++) {
2057 row = i + rstart;
2058 nnz = bi[i+1] - bi[i];
2059 Jptr = bj + bi[i];
2060 ierr = MatSetValues(Cmpi,1,&row,nnz,Jptr,NULL((void*)0),INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2060,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2061 }
2062 ierr = MatAssemblyBegin(Cmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2062,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2063 ierr = MatAssemblyEnd(Cmpi,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2063,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2064 merge->bi = bi;
2065 merge->bj = bj;
2066 merge->coi = coi;
2067 merge->coj = coj;
2068 merge->buf_ri = buf_ri;
2069 merge->buf_rj = buf_rj;
2070 merge->owners_co = owners_co;
2071
2072 /* attach the supporting struct to Cmpi for reuse */
2073 c = (Mat_MPIAIJ*)Cmpi->data;
2074
2075 c->ap = ptap;
2076 ptap->api = NULL((void*)0);
2077 ptap->apj = NULL((void*)0);
2078 ptap->merge = merge;
2079 ptap->apa = NULL((void*)0);
2080 ptap->destroy = Cmpi->ops->destroy;
2081 ptap->duplicate = Cmpi->ops->duplicate;
2082
2083 Cmpi->ops->mattransposemultnumeric = MatTransposeMatMultNumeric_MPIAIJ_MPIAIJ;
2084 Cmpi->ops->destroy = MatDestroy_MPIAIJ_PtAP;
2085 Cmpi->ops->freeintermediatedatastructures = MatFreeIntermediateDataStructures_MPIAIJ_AP;
2086
2087 *C = Cmpi;
2088#if defined(PETSC_USE_INFO1)
2089 if (bi[pn] != 0) {
2090 ierr = PetscInfo3(Cmpi,"Reallocs %D; Fill ratio: given %g needed %g.\n",nspacedouble,(double)fill,(double)afill)PetscInfo_Private(__func__,Cmpi,"Reallocs %D; Fill ratio: given %g needed %g.\n"
,nspacedouble,(double)fill,(double)afill);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2090,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2091 ierr = PetscInfo1(Cmpi,"Use MatTransposeMatMult(A,B,MatReuse,%g,&C) for best performance.\n",(double)afill)PetscInfo_Private(__func__,Cmpi,"Use MatTransposeMatMult(A,B,MatReuse,%g,&C) for best performance.\n"
,(double)afill);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2091,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2092 } else {
2093 ierr = PetscInfo(Cmpi,"Empty matrix product\n")PetscInfo_Private(__func__,Cmpi,"Empty matrix product\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2093,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/aij/mpi/mpimatmatmult.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);
2094 }
2095#endif
2096 PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);
2097}