/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c

Bug Summary

File:	dm/impls/plex/plex.c
Warning:	line 7399, column 21 The right operand of '<' is a garbage value

Annotated Source Code

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#include <petsc/private/dmpleximpl.h> /*I "petscdmplex.h" I*/

#include <petsc/private/isimpl.h>

#include <petsc/private/vecimpl.h>

#include <petsc/private/glvisvecimpl.h>

#include <petscsf.h>

#include <petscds.h>

#include <petscdraw.h>

#include <petscdmfield.h>

/* Logging support */

PetscLogEvent DMPLEX_Interpolate, DMPLEX_Partition, DMPLEX_Distribute, DMPLEX_DistributeCones, DMPLEX_DistributeLabels, DMPLEX_DistributeSF, DMPLEX_DistributeOverlap, DMPLEX_DistributeField, DMPLEX_DistributeData, DMPLEX_Migrate, DMPLEX_InterpolateSF, DMPLEX_GlobalToNaturalBegin, DMPLEX_GlobalToNaturalEnd, DMPLEX_NaturalToGlobalBegin, DMPLEX_NaturalToGlobalEnd, DMPLEX_Stratify, DMPLEX_Symmetrize, DMPLEX_Preallocate, DMPLEX_ResidualFEM, DMPLEX_JacobianFEM, DMPLEX_InterpolatorFEM, DMPLEX_InjectorFEM, DMPLEX_IntegralFEM, DMPLEX_CreateGmsh, DMPLEX_RebalanceSharedPoints, DMPLEX_PartSelf, DMPLEX_PartLabelInvert, DMPLEX_PartLabelCreateSF, DMPLEX_PartStratSF, DMPLEX_CreatePointSF;

PETSC_EXTERNextern __attribute__((visibility ("default"))) PetscErrorCode VecView_MPI(Vec, PetscViewer);

/*@

DMPlexRefineSimplexToTensor - Uniformly refines simplicial cells into tensor product cells.

3 quadrilaterals per triangle in 2D and 4 hexahedra per tetrahedron in 3D.

Collective

Input Parameters:

. dm - The DMPlex object

Output Parameters:

. dmRefined - The refined DMPlex object

Note: Returns NULL if the mesh is already a tensor product mesh.

Level: intermediate

.seealso: DMPlexCreate(), DMPlexSetRefinementUniform()

@*/

PetscErrorCode DMPlexRefineSimplexToTensor(DM dm, DM *dmRefined)

{

PetscInt dim, cMax, fMax, cStart, cEnd, coneSize;

CellRefiner cellRefiner;

PetscBool lop, allnoop, localized;

PetscErrorCode ierr;

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 40; petscstack->petscroutine
[petscstack->currentsize] = PETSC_TRUE; petscstack->currentsize
++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE
|| petscstack->hotdepth); } ; } while (0); ; } while (0);

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),41,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),41,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",64,PETSC_ERROR_INITIAL
,"Invalid Pointer to Object: Parameter # %d",1); if (((PetscObject
)(dm))->classid != DM_CLASSID) { if (((PetscObject)(dm))->
classid == -1) return PetscError(((MPI_Comm)0x44000001),41,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",64,PETSC_ERROR_INITIAL
,"Object already free: Parameter # %d",1); else return PetscError
(((MPI_Comm)0x44000001),41,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,62,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d"
,1); } } while (0);

PetscValidPointer(dmRefined, 1)do { if (!dmRefined) return PetscError(((MPI_Comm)0x44000001)
,42,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",1); if
(!PetscCheckPointer(dmRefined,PETSC_CHAR)) return PetscError
(((MPI_Comm)0x44000001),42,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",1);
} while (0);

ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),43,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

ierr = DMPlexGetHybridBounds(dm,&cMax,&fMax,NULL((void*)0),NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),44,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

ierr = DMPlexGetHeightStratum(dm,0,&cStart,&cEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),45,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

if (!(cEnd - cStart)) cellRefiner = REFINER_NOOP;

else {

ierr = DMPlexGetConeSize(dm,cStart,&coneSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),48,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

switch (dim) {

case 1:

cellRefiner = REFINER_NOOP;

break;

case 2:

switch (coneSize) {

case 3:

if (cMax >= 0) cellRefiner = REFINER_HYBRID_SIMPLEX_TO_HEX_2D;

else cellRefiner = REFINER_SIMPLEX_TO_HEX_2D;

break;

case 4:

if (cMax >= 0) cellRefiner = REFINER_HYBRID_SIMPLEX_TO_HEX_2D;

else cellRefiner = REFINER_NOOP;

break;

default: SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot handle coneSize %D with dimension %D",coneSize,dim)return PetscError(((MPI_Comm)0x44000001),63,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,56,PETSC_ERROR_INITIAL,"Cannot handle coneSize %D with dimension %D"
,coneSize,dim);

}

break;

case 3:

switch (coneSize) {

case 4:

if (cMax >= 0) cellRefiner = REFINER_HYBRID_SIMPLEX_TO_HEX_3D;

else cellRefiner = REFINER_SIMPLEX_TO_HEX_3D;

break;

case 5:

if (cMax >= 0) cellRefiner = REFINER_HYBRID_SIMPLEX_TO_HEX_3D;

else cellRefiner = REFINER_NOOP;

break;

case 6:

if (cMax >= 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Simplex2Tensor in 3D with Hybrid mesh not yet done")return PetscError(((MPI_Comm)0x44000001),77,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,56,PETSC_ERROR_INITIAL,"Simplex2Tensor in 3D with Hybrid mesh not yet done"
);

cellRefiner = REFINER_NOOP;

break;

default: SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot handle coneSize %D with dimension %D",coneSize,dim)return PetscError(((MPI_Comm)0x44000001),80,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,56,PETSC_ERROR_INITIAL,"Cannot handle coneSize %D with dimension %D"
,coneSize,dim);

}

break;

default: SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot handle dimension %D",dim)return PetscError(((MPI_Comm)0x44000001),83,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,56,PETSC_ERROR_INITIAL,"Cannot handle dimension %D",dim);

}

/* return if we don't need to refine */

lop = (cellRefiner == REFINER_NOOP) ? PETSC_TRUE : PETSC_FALSE;

ierr = MPIU_Allreduce(&lop,&allnoop,1,MPIU_BOOL,MPI_LAND,PetscObjectComm((PetscObject)dm))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject)dm),
1,88,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm
((PetscObject)dm))),0) || MPI_Allreduce((&lop),(&allnoop
),(1),(MPIU_BOOL),((MPI_Op)(0x58000005)),(PetscObjectComm((PetscObject
)dm)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),88,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

if (allnoop) {

*dmRefined = NULL((void*)0);

PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);

}

ierr = DMPlexRefineUniform_Internal(dm, cellRefiner, dmRefined);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),93,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

ierr = DMCopyBoundary(dm, *dmRefined);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),94,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

ierr = DMGetCoordinatesLocalized(dm, &localized);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),95,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

if (localized) {

ierr = DMLocalizeCoordinates(*dmRefined);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),97,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

}

100

}

101

102

PetscErrorCode DMPlexGetFieldType_Internal(DM dm, PetscSection section, PetscInt field, PetscInt *sStart, PetscInt *sEnd, PetscViewerVTKFieldType *ft)

103

{

104

PetscInt dim, pStart, pEnd, vStart, vEnd, cStart, cEnd, cEndInterior;

105

PetscInt vcdof[2] = {0,0}, globalvcdof[2];

106

PetscErrorCode ierr;

107

108

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 108; petscstack->petscroutine
[petscstack->currentsize] = PETSC_TRUE; petscstack->currentsize
++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE
|| petscstack->hotdepth); } ; } while (0); ; } while (0);

109

*ft = PETSC_VTK_POINT_FIELD;

110

ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),110,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

111

ierr = DMPlexGetDepthStratum(dm, 0, &vStart, &vEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),111,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

112

ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),112,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

113

ierr = DMPlexGetHybridBounds(dm, &cEndInterior, NULL((void*)0), NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),113,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

114

cEnd = cEndInterior < 0 ? cEnd : cEndInterior;

115

ierr = PetscSectionGetChart(section, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),115,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

116

if (field >= 0) {

117

if ((vStart >= pStart) && (vStart < pEnd)) {ierr = PetscSectionGetFieldDof(section, vStart, field, &vcdof[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),117,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

118

if ((cStart >= pStart) && (cStart < pEnd)) {ierr = PetscSectionGetFieldDof(section, cStart, field, &vcdof[1]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),118,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

119

} else {

120

if ((vStart >= pStart) && (vStart < pEnd)) {ierr = PetscSectionGetDof(section, vStart, &vcdof[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),120,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

121

if ((cStart >= pStart) && (cStart < pEnd)) {ierr = PetscSectionGetDof(section, cStart, &vcdof[1]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),121,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

122

}

123

ierr = MPI_Allreduce(vcdof, globalvcdof, 2, MPIU_INT, MPI_MAX, PetscObjectComm((PetscObject)dm))((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm
((PetscObject)dm))),0) || MPI_Allreduce((vcdof),(globalvcdof)
,(2),(((MPI_Datatype)0x4c000405)),((MPI_Op)(0x58000001)),(PetscObjectComm
((PetscObject)dm))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),123,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

124

if (globalvcdof[0]) {

125

*sStart = vStart;

126

*sEnd = vEnd;

127

if (globalvcdof[0] == dim) *ft = PETSC_VTK_POINT_VECTOR_FIELD;

128

else *ft = PETSC_VTK_POINT_FIELD;

129

} else if (globalvcdof[1]) {

130

*sStart = cStart;

131

*sEnd = cEnd;

132

if (globalvcdof[1] == dim) *ft = PETSC_VTK_CELL_VECTOR_FIELD;

133

else *ft = PETSC_VTK_CELL_FIELD;

134

} else SETERRQ(PetscObjectComm((PetscObject) dm), PETSC_ERR_ARG_WRONG, "Could not classify input Vec for VTK")return PetscError(PetscObjectComm((PetscObject) dm),134,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Could not classify input Vec for VTK");

135

136

}

137

138

static PetscErrorCode VecView_Plex_Local_Draw(Vec v, PetscViewer viewer)

139

{

140

DM dm;

141

PetscSection s;

142

PetscDraw draw, popup;

143

DM cdm;

144

PetscSection coordSection;

145

Vec coordinates;

146

const PetscScalar *coords, *array;

147

PetscReal bound[4] = {PETSC_MAX_REAL1.7976931348623157e+308, PETSC_MAX_REAL1.7976931348623157e+308, PETSC_MIN_REAL(-1.7976931348623157e+308), PETSC_MIN_REAL(-1.7976931348623157e+308)};

148

PetscReal vbound[2], time;

149

PetscBool isnull, flg;

150

PetscInt dim, Nf, f, Nc, comp, vStart, vEnd, cStart, cEnd, c, N, level, step, w = 0;

151

const char *name;

152

char title[PETSC_MAX_PATH_LEN4096];

153

PetscErrorCode ierr;

154

155

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 155; petscstack->petscroutine
[petscstack->currentsize] = PETSC_TRUE; petscstack->currentsize
++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE
|| petscstack->hotdepth); } ; } while (0); ; } while (0);

156

ierr = PetscViewerDrawGetDraw(viewer, 0, &draw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),156,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

157

ierr = PetscDrawIsNull(draw, &isnull);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),157,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

158

if (isnull) PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);

159

160

ierr = VecGetDM(v, &dm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),160,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

161

ierr = DMGetCoordinateDim(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),161,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

162

if (dim != 2) SETERRQ1(PetscObjectComm((PetscObject) dm), PETSC_ERR_SUP, "Cannot draw meshes of dimension %D. Use PETSCVIEWERGLVIS", dim)return PetscError(PetscObjectComm((PetscObject) dm),162,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",56,PETSC_ERROR_INITIAL
,"Cannot draw meshes of dimension %D. Use PETSCVIEWERGLVIS",dim
);

163

ierr = DMGetSection(dm, &s);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),163,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

164

ierr = PetscSectionGetNumFields(s, &Nf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),164,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

165

ierr = DMGetCoarsenLevel(dm, &level);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),165,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

166

ierr = DMGetCoordinateDM(dm, &cdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),166,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

167

ierr = DMGetSection(cdm, &coordSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),167,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

168

ierr = DMGetCoordinatesLocal(dm, &coordinates);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),168,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

169

ierr = DMPlexGetDepthStratum(dm, 0, &vStart, &vEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),169,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

170

ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),170,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

171

172

ierr = PetscObjectGetName((PetscObject) v, &name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),172,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

173

ierr = DMGetOutputSequenceNumber(dm, &step, &time);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),173,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

174

175

ierr = VecGetLocalSize(coordinates, &N);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),175,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

176

ierr = VecGetArrayRead(coordinates, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),176,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

177

for (c = 0; c < N; c += dim) {

178

bound[0] = PetscMin(bound[0], PetscRealPart(coords[c]))(((bound[0])<((coords[c]))) ? (bound[0]) : ((coords[c]))); bound[2] = PetscMax(bound[2], PetscRealPart(coords[c]))(((bound[2])<((coords[c]))) ? ((coords[c])) : (bound[2]));

179

bound[1] = PetscMin(bound[1], PetscRealPart(coords[c+1]))(((bound[1])<((coords[c+1]))) ? (bound[1]) : ((coords[c+1]
))); bound[3] = PetscMax(bound[3], PetscRealPart(coords[c+1]))(((bound[3])<((coords[c+1]))) ? ((coords[c+1])) : (bound[3
]));

180

}

181

ierr = VecRestoreArrayRead(coordinates, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),181,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

182

ierr = PetscDrawClear(draw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),182,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

183

184

/* Could implement something like DMDASelectFields() */

185

for (f = 0; f < Nf; ++f) {

186

DM fdm = dm;

187

Vec fv = v;

188

IS fis;

189

char prefix[PETSC_MAX_PATH_LEN4096];

190

const char *fname;

191

192

ierr = PetscSectionGetFieldComponents(s, f, &Nc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),192,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

193

ierr = PetscSectionGetFieldName(s, f, &fname);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),193,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

194

195

if (v->hdr.prefix) {ierr = PetscStrncpy(prefix, v->hdr.prefix,sizeof(prefix));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),195,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

196

else {prefix[0] = '\0';}

197

if (Nf > 1) {

198

ierr = DMCreateSubDM(dm, 1, &f, &fis, &fdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),198,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

199

ierr = VecGetSubVector(v, fis, &fv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),199,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

200

ierr = PetscStrlcat(prefix, fname,sizeof(prefix));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),200,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

201

ierr = PetscStrlcat(prefix, "_",sizeof(prefix));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),201,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

202

}

203

for (comp = 0; comp < Nc; ++comp, ++w) {

204

PetscInt nmax = 2;

205

206

ierr = PetscViewerDrawGetDraw(viewer, w, &draw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),206,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

207

if (Nc > 1) {ierr = PetscSNPrintf(title, sizeof(title), "%s:%s_%D Step: %D Time: %.4g", name, fname, comp, step, time);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),207,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

208

else {ierr = PetscSNPrintf(title, sizeof(title), "%s:%s Step: %D Time: %.4g", name, fname, step, time);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),208,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

209

ierr = PetscDrawSetTitle(draw, title);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),209,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

210

211

/* TODO Get max and min only for this component */

212

ierr = PetscOptionsGetRealArray(NULL((void*)0), prefix, "-vec_view_bounds", vbound, &nmax, &flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),212,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

213

if (!flg) {

214

ierr = VecMin(fv, NULL((void*)0), &vbound[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),214,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

215

ierr = VecMax(fv, NULL((void*)0), &vbound[1]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),215,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

216

if (vbound[1] <= vbound[0]) vbound[1] = vbound[0] + 1.0;

217

}

218

ierr = PetscDrawGetPopup(draw, &popup);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),218,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

219

ierr = PetscDrawScalePopup(popup, vbound[0], vbound[1]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),219,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

220

ierr = PetscDrawSetCoordinates(draw, bound[0], bound[1], bound[2], bound[3]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),220,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

221

222

ierr = VecGetArrayRead(fv, &array);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),222,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

223

for (c = cStart; c < cEnd; ++c) {

224

PetscScalar *coords = NULL((void*)0), *a = NULL((void*)0);

225

PetscInt numCoords, color[4] = {-1,-1,-1,-1};

226

227

ierr = DMPlexPointLocalRead(fdm, c, array, &a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),227,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

228

if (a) {

229

color[0] = PetscDrawRealToColor(PetscRealPart(a[comp])(a[comp]), vbound[0], vbound[1]);

230

color[1] = color[2] = color[3] = color[0];

231

} else {

232

PetscScalar *vals = NULL((void*)0);

233

PetscInt numVals, va;

234

235

ierr = DMPlexVecGetClosure(fdm, NULL((void*)0), fv, c, &numVals, &vals);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),235,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

236

if (numVals % Nc) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "The number of components %D does not divide the number of values in the closure %D", Nc, numVals)return PetscError(((MPI_Comm)0x44000001),236,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,62,PETSC_ERROR_INITIAL,"The number of components %D does not divide the number of values in the closure %D"
,Nc,numVals);

237

switch (numVals/Nc) {

238

case 3: /* P1 Triangle */

239

case 4: /* P1 Quadrangle */

240

for (va = 0; va < numVals/Nc; ++va) color[va] = PetscDrawRealToColor(PetscRealPart(vals[va*Nc+comp])(vals[va*Nc+comp]), vbound[0], vbound[1]);

241

break;

242

case 6: /* P2 Triangle */

243

case 8: /* P2 Quadrangle */

244

for (va = 0; va < numVals/(Nc*2); ++va) color[va] = PetscDrawRealToColor(PetscRealPart(vals[va*Nc+comp + numVals/(Nc*2)])(vals[va*Nc+comp + numVals/(Nc*2)]), vbound[0], vbound[1]);

245

break;

246

default: SETERRQ1(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Number of values for cell closure %D cannot be handled", numVals/Nc)return PetscError(((MPI_Comm)0x44000001),246,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,62,PETSC_ERROR_INITIAL,"Number of values for cell closure %D cannot be handled"
,numVals/Nc);

247

}

248

ierr = DMPlexVecRestoreClosure(fdm, NULL((void*)0), fv, c, &numVals, &vals);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),248,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

249

}

250

ierr = DMPlexVecGetClosure(dm, coordSection, coordinates, c, &numCoords, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),250,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

251

switch (numCoords) {

252

case 6:

253

ierr = PetscDrawTriangle(draw, PetscRealPart(coords[0])(coords[0]), PetscRealPart(coords[1])(coords[1]), PetscRealPart(coords[2])(coords[2]), PetscRealPart(coords[3])(coords[3]), PetscRealPart(coords[4])(coords[4]), PetscRealPart(coords[5])(coords[5]), color[0], color[1], color[2]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),253,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

254

break;

255

case 8:

256

ierr = PetscDrawTriangle(draw, PetscRealPart(coords[0])(coords[0]), PetscRealPart(coords[1])(coords[1]), PetscRealPart(coords[2])(coords[2]), PetscRealPart(coords[3])(coords[3]), PetscRealPart(coords[4])(coords[4]), PetscRealPart(coords[5])(coords[5]), color[0], color[1], color[2]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),256,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

257

ierr = PetscDrawTriangle(draw, PetscRealPart(coords[4])(coords[4]), PetscRealPart(coords[5])(coords[5]), PetscRealPart(coords[6])(coords[6]), PetscRealPart(coords[7])(coords[7]), PetscRealPart(coords[0])(coords[0]), PetscRealPart(coords[1])(coords[1]), color[2], color[3], color[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),257,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

258

break;

259

default: SETERRQ1(PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot draw cells with %D coordinates", numCoords)return PetscError(((MPI_Comm)0x44000001),259,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,56,PETSC_ERROR_INITIAL,"Cannot draw cells with %D coordinates"
,numCoords);

260

}

261

ierr = DMPlexVecRestoreClosure(dm, coordSection, coordinates, c, &numCoords, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),261,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

262

}

263

ierr = VecRestoreArrayRead(fv, &array);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),263,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

264

ierr = PetscDrawFlush(draw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),264,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

265

ierr = PetscDrawPause(draw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),265,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

266

ierr = PetscDrawSave(draw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),266,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

267

}

268

if (Nf > 1) {

269

ierr = VecRestoreSubVector(v, fis, &fv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),269,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

270

ierr = ISDestroy(&fis);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),270,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

271

ierr = DMDestroy(&fdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),271,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

272

}

273

}

274

275

}

276

277

static PetscErrorCode VecView_Plex_Local_VTK(Vec v, PetscViewer viewer)

278

{

279

DM dm;

280

Vec locv;

281

const char *name;

282

PetscSection section;

283

PetscInt pStart, pEnd;

284

PetscViewerVTKFieldType ft;

285

PetscErrorCode ierr;

286

287

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 287; petscstack->petscroutine
[petscstack->currentsize] = PETSC_TRUE; petscstack->currentsize
++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE
|| petscstack->hotdepth); } ; } while (0); ; } while (0);

288

ierr = VecGetDM(v, &dm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),288,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

289

ierr = DMCreateLocalVector(dm, &locv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),289,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0); /* VTK viewer requires exclusive ownership of the vector */

290

ierr = PetscObjectGetName((PetscObject) v, &name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),290,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

291

ierr = PetscObjectSetName((PetscObject) locv, name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),291,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

292

ierr = VecCopy(v, locv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),292,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

293

ierr = DMGetSection(dm, &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),293,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

294

ierr = DMPlexGetFieldType_Internal(dm, section, PETSC_DETERMINE-1, &pStart, &pEnd, &ft);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),294,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

295

ierr = PetscViewerVTKAddField(viewer, (PetscObject) dm, DMPlexVTKWriteAll, ft, PETSC_TRUE,(PetscObject) locv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),295,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

296

297

}

298

299

PetscErrorCode VecView_Plex_Local(Vec v, PetscViewer viewer)

300

{

301

DM dm;

302

PetscBool isvtk, ishdf5, isdraw, isglvis;

303

PetscErrorCode ierr;

304

305

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 305; petscstack->petscroutine
[petscstack->currentsize] = PETSC_TRUE; petscstack->currentsize
++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE
|| petscstack->hotdepth); } ; } while (0); ; } while (0);

306

ierr = VecGetDM(v, &dm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),306,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

307

if (!dm) SETERRQ(PetscObjectComm((PetscObject)v), PETSC_ERR_ARG_WRONG, "Vector not generated from a DM")return PetscError(PetscObjectComm((PetscObject)v),307,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Vector not generated from a DM");

308

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERVTK"vtk", &isvtk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),308,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

309

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERHDF5"hdf5", &ishdf5);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),309,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

310

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERDRAW"draw", &isdraw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),310,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

311

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERGLVIS"glvis", &isglvis);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),311,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

312

if (isvtk || ishdf5 || isdraw || isglvis) {

313

PetscInt i,numFields;

314

PetscObject fe;

315

PetscBool fem = PETSC_FALSE;

316

Vec locv = v;

317

const char *name;

318

PetscInt step;

319

PetscReal time;

320

321

ierr = DMGetNumFields(dm, &numFields);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),321,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

322

for (i=0; i<numFields; i++) {

323

ierr = DMGetField(dm, i, NULL((void*)0), &fe);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),323,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

324

if (fe->classid == PETSCFE_CLASSID) { fem = PETSC_TRUE; break; }

325

}

326

if (fem) {

327

ierr = DMGetLocalVector(dm, &locv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),327,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

328

ierr = PetscObjectGetName((PetscObject) v, &name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),328,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

329

ierr = PetscObjectSetName((PetscObject) locv, name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),329,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

330

ierr = VecCopy(v, locv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),330,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

331

ierr = DMGetOutputSequenceNumber(dm, NULL((void*)0), &time);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),331,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

332

ierr = DMPlexInsertBoundaryValues(dm, PETSC_TRUE, locv, time, NULL((void*)0), NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),332,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

333

}

334

if (isvtk) {

335

ierr = VecView_Plex_Local_VTK(locv, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),335,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

336

} else if (ishdf5) {

337

#if defined(PETSC_HAVE_HDF5)

338

ierr = VecView_Plex_Local_HDF5_Internal(locv, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),338,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

339

#else

340

SETERRQ(PetscObjectComm((PetscObject) dm), PETSC_ERR_SUP, "HDF5 not supported in this build.\nPlease reconfigure using --download-hdf5")return PetscError(PetscObjectComm((PetscObject) dm),340,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",56,PETSC_ERROR_INITIAL
,"HDF5 not supported in this build.\nPlease reconfigure using --download-hdf5"
);

341

#endif

342

} else if (isdraw) {

343

ierr = VecView_Plex_Local_Draw(locv, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),343,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

344

} else if (isglvis) {

345

ierr = DMGetOutputSequenceNumber(dm, &step, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),345,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

346

ierr = PetscViewerGLVisSetSnapId(viewer, step);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),346,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

347

ierr = VecView_GLVis(locv, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),347,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

348

}

349

if (fem) {ierr = DMRestoreLocalVector(dm, &locv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),349,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

350

} else {

351

PetscBool isseq;

352

353

ierr = PetscObjectTypeCompare((PetscObject) v, VECSEQ"seq", &isseq);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),353,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

354

if (isseq) {ierr = VecView_Seq(v, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),354,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

355

else {ierr = VecView_MPI(v, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),355,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

356

}

357

358

}

359

360

PetscErrorCode VecView_Plex(Vec v, PetscViewer viewer)

361

{

362

DM dm;

363

PetscBool isvtk, ishdf5, isdraw, isglvis;

364

PetscErrorCode ierr;

365

366

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 366; petscstack->petscroutine
[petscstack->currentsize] = PETSC_TRUE; petscstack->currentsize
++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE
|| petscstack->hotdepth); } ; } while (0); ; } while (0);

367

ierr = VecGetDM(v, &dm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),367,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

368

if (!dm) SETERRQ(PetscObjectComm((PetscObject)v), PETSC_ERR_ARG_WRONG, "Vector not generated from a DM")return PetscError(PetscObjectComm((PetscObject)v),368,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Vector not generated from a DM");

369

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERVTK"vtk", &isvtk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),369,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

370

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERHDF5"hdf5", &ishdf5);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),370,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

371

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERDRAW"draw", &isdraw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),371,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

372

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERGLVIS"glvis", &isglvis);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),372,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

373

if (isvtk || isdraw || isglvis) {

374

Vec locv;

375

const char *name;

376

377

ierr = DMGetLocalVector(dm, &locv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),377,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

378

ierr = PetscObjectGetName((PetscObject) v, &name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),378,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

379

ierr = PetscObjectSetName((PetscObject) locv, name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),379,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

380

ierr = DMGlobalToLocalBegin(dm, v, INSERT_VALUES, locv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),380,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

381

ierr = DMGlobalToLocalEnd(dm, v, INSERT_VALUES, locv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),381,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

382

ierr = VecView_Plex_Local(locv, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),382,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

383

ierr = DMRestoreLocalVector(dm, &locv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),383,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

384

} else if (ishdf5) {

385

#if defined(PETSC_HAVE_HDF5)

386

ierr = VecView_Plex_HDF5_Internal(v, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),386,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

387

#else

388

SETERRQ(PetscObjectComm((PetscObject) dm), PETSC_ERR_SUP, "HDF5 not supported in this build.\nPlease reconfigure using --download-hdf5")return PetscError(PetscObjectComm((PetscObject) dm),388,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",56,PETSC_ERROR_INITIAL
,"HDF5 not supported in this build.\nPlease reconfigure using --download-hdf5"
);

389

#endif

390

} else {

391

PetscBool isseq;

392

393

ierr = PetscObjectTypeCompare((PetscObject) v, VECSEQ"seq", &isseq);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),393,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

394

if (isseq) {ierr = VecView_Seq(v, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),394,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

395

else {ierr = VecView_MPI(v, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),395,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

396

}

397

398

}

399

400

PetscErrorCode VecView_Plex_Native(Vec originalv, PetscViewer viewer)

401

{

402

DM dm;

403

MPI_Comm comm;

404

PetscViewerFormat format;

405

Vec v;

406

PetscBool isvtk, ishdf5;

407

PetscErrorCode ierr;

408

409

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 409; petscstack->petscroutine
[petscstack->currentsize] = PETSC_TRUE; petscstack->currentsize
++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE
|| petscstack->hotdepth); } ; } while (0); ; } while (0);

410

ierr = VecGetDM(originalv, &dm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),410,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

411

ierr = PetscObjectGetComm((PetscObject) originalv, &comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),411,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

412

if (!dm) SETERRQ(comm, PETSC_ERR_ARG_WRONG, "Vector not generated from a DM")return PetscError(comm,412,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,62,PETSC_ERROR_INITIAL,"Vector not generated from a DM");

413

ierr = PetscViewerGetFormat(viewer, &format);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),413,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

414

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERHDF5"hdf5", &ishdf5);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),414,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

415

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERVTK"vtk", &isvtk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),415,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

416

if (format == PETSC_VIEWER_NATIVE) {

417

/* Natural ordering is the common case for DMDA, NATIVE means plain vector, for PLEX is the opposite */

418

/* this need a better fix */

419

if (dm->useNatural) {

420

if (dm->sfNatural) {

421

const char *vecname;

422

PetscInt n, nroots;

423

424

ierr = VecGetLocalSize(originalv, &n);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),424,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

425

ierr = PetscSFGetGraph(dm->sfNatural, &nroots, NULL((void*)0), NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),425,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

426

if (n == nroots) {

427

ierr = DMGetGlobalVector(dm, &v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),427,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

428

ierr = DMPlexGlobalToNaturalBegin(dm, originalv, v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),428,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

429

ierr = DMPlexGlobalToNaturalEnd(dm, originalv, v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),429,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

430

ierr = PetscObjectGetName((PetscObject) originalv, &vecname);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),430,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

431

ierr = PetscObjectSetName((PetscObject) v, vecname);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),431,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

432

} else SETERRQ(comm, PETSC_ERR_ARG_WRONG, "DM global to natural SF only handles global vectors")return PetscError(comm,432,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,62,PETSC_ERROR_INITIAL,"DM global to natural SF only handles global vectors"
);

433

} else SETERRQ(comm, PETSC_ERR_ARG_WRONGSTATE, "DM global to natural SF was not created")return PetscError(comm,433,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,73,PETSC_ERROR_INITIAL,"DM global to natural SF was not created"
);

434

} else v = originalv;

435

} else v = originalv;

436

437

if (ishdf5) {

438

#if defined(PETSC_HAVE_HDF5)

439

ierr = VecView_Plex_HDF5_Native_Internal(v, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),439,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

440

#else

441

SETERRQ(comm, PETSC_ERR_SUP, "HDF5 not supported in this build.\nPlease reconfigure using --download-hdf5")return PetscError(comm,441,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,56,PETSC_ERROR_INITIAL,"HDF5 not supported in this build.\nPlease reconfigure using --download-hdf5"
);

442

#endif

443

} else if (isvtk) {

444

SETERRQ(comm, PETSC_ERR_SUP, "VTK format does not support viewing in natural order. Please switch to HDF5.")return PetscError(comm,444,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,56,PETSC_ERROR_INITIAL,"VTK format does not support viewing in natural order. Please switch to HDF5."
);

445

} else {

446

PetscBool isseq;

447

448

ierr = PetscObjectTypeCompare((PetscObject) v, VECSEQ"seq", &isseq);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),448,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

449

if (isseq) {ierr = VecView_Seq(v, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),449,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

450

else {ierr = VecView_MPI(v, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),450,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

451

}

452

if (v != originalv) {ierr = DMRestoreGlobalVector(dm, &v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),452,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

453

454

}

455

456

PetscErrorCode VecLoad_Plex_Local(Vec v, PetscViewer viewer)

457

{

458

DM dm;

459

PetscBool ishdf5;

460

PetscErrorCode ierr;

461

462

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 462; petscstack->petscroutine
[petscstack->currentsize] = PETSC_TRUE; petscstack->currentsize
++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE
|| petscstack->hotdepth); } ; } while (0); ; } while (0);

463

ierr = VecGetDM(v, &dm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),463,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

464

if (!dm) SETERRQ(PetscObjectComm((PetscObject)v), PETSC_ERR_ARG_WRONG, "Vector not generated from a DM")return PetscError(PetscObjectComm((PetscObject)v),464,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Vector not generated from a DM");

465

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERHDF5"hdf5", &ishdf5);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),465,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

466

if (ishdf5) {

467

DM dmBC;

468

Vec gv;

469

const char *name;

470

471

ierr = DMGetOutputDM(dm, &dmBC);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),471,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

472

ierr = DMGetGlobalVector(dmBC, &gv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),472,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

473

ierr = PetscObjectGetName((PetscObject) v, &name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),473,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

474

ierr = PetscObjectSetName((PetscObject) gv, name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),474,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

475

ierr = VecLoad_Default(gv, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),475,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

476

ierr = DMGlobalToLocalBegin(dmBC, gv, INSERT_VALUES, v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),476,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

477

ierr = DMGlobalToLocalEnd(dmBC, gv, INSERT_VALUES, v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),477,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

478

ierr = DMRestoreGlobalVector(dmBC, &gv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),478,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

479

} else {

480

ierr = VecLoad_Default(v, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),480,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

481

}

482

483

}

484

485

PetscErrorCode VecLoad_Plex(Vec v, PetscViewer viewer)

486

{

487

DM dm;

488

PetscBool ishdf5;

489

PetscErrorCode ierr;

490

491

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 491; petscstack->petscroutine
[petscstack->currentsize] = PETSC_TRUE; petscstack->currentsize
++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE
|| petscstack->hotdepth); } ; } while (0); ; } while (0);

492

ierr = VecGetDM(v, &dm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),492,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

493

if (!dm) SETERRQ(PetscObjectComm((PetscObject)v), PETSC_ERR_ARG_WRONG, "Vector not generated from a DM")return PetscError(PetscObjectComm((PetscObject)v),493,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Vector not generated from a DM");

494

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERHDF5"hdf5", &ishdf5);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),494,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

495

if (ishdf5) {

496

#if defined(PETSC_HAVE_HDF5)

497

ierr = VecLoad_Plex_HDF5_Internal(v, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),497,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

498

#else

499

SETERRQ(PetscObjectComm((PetscObject) dm), PETSC_ERR_SUP, "HDF5 not supported in this build.\nPlease reconfigure using --download-hdf5")return PetscError(PetscObjectComm((PetscObject) dm),499,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",56,PETSC_ERROR_INITIAL
,"HDF5 not supported in this build.\nPlease reconfigure using --download-hdf5"
);

500

#endif

501

} else {

502

ierr = VecLoad_Default(v, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),502,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

503

}

504

505

}

506

507

PetscErrorCode VecLoad_Plex_Native(Vec originalv, PetscViewer viewer)

508

{

509

DM dm;

510

PetscViewerFormat format;

511

PetscBool ishdf5;

512

PetscErrorCode ierr;

513

514

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 514; petscstack->petscroutine
[petscstack->currentsize] = PETSC_TRUE; petscstack->currentsize
++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE
|| petscstack->hotdepth); } ; } while (0); ; } while (0);

515

ierr = VecGetDM(originalv, &dm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),515,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

516

if (!dm) SETERRQ(PetscObjectComm((PetscObject) originalv), PETSC_ERR_ARG_WRONG, "Vector not generated from a DM")return PetscError(PetscObjectComm((PetscObject) originalv),516
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,62,PETSC_ERROR_INITIAL,"Vector not generated from a DM");

517

ierr = PetscViewerGetFormat(viewer, &format);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),517,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

518

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERHDF5"hdf5", &ishdf5);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),518,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

519

if (format == PETSC_VIEWER_NATIVE) {

520

if (dm->useNatural) {

521

if (dm->sfNatural) {

522

if (ishdf5) {

523

#if defined(PETSC_HAVE_HDF5)

524

Vec v;

525

const char *vecname;

526

527

ierr = DMGetGlobalVector(dm, &v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),527,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

528

ierr = PetscObjectGetName((PetscObject) originalv, &vecname);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),528,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

529

ierr = PetscObjectSetName((PetscObject) v, vecname);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),529,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

530

ierr = VecLoad_Plex_HDF5_Native_Internal(v, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),530,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

531

ierr = DMPlexNaturalToGlobalBegin(dm, v, originalv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),531,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

532

ierr = DMPlexNaturalToGlobalEnd(dm, v, originalv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),532,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

533

ierr = DMRestoreGlobalVector(dm, &v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),533,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

534

#else

535

SETERRQ(PetscObjectComm((PetscObject) dm), PETSC_ERR_SUP, "HDF5 not supported in this build.\nPlease reconfigure using --download-hdf5")return PetscError(PetscObjectComm((PetscObject) dm),535,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",56,PETSC_ERROR_INITIAL
,"HDF5 not supported in this build.\nPlease reconfigure using --download-hdf5"
);

536

#endif

537

} else SETERRQ(PetscObjectComm((PetscObject) dm), PETSC_ERR_SUP, "Reading in natural order is not supported for anything but HDF5.")return PetscError(PetscObjectComm((PetscObject) dm),537,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",56,PETSC_ERROR_INITIAL
,"Reading in natural order is not supported for anything but HDF5."
);

538

}

539

} else {

540

ierr = VecLoad_Default(originalv, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),540,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

541

}

542

}

543

544

}

545

546

PETSC_UNUSED__attribute((unused)) static PetscErrorCode DMPlexView_Ascii_Geometry(DM dm, PetscViewer viewer)

547

{

548

PetscSection coordSection;

549

Vec coordinates;

550

DMLabel depthLabel;

551

const char *name[4];

552

const PetscScalar *a;

553

PetscInt dim, pStart, pEnd, cStart, cEnd, c;

554

PetscErrorCode ierr;

555

556

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 556; petscstack->petscroutine
[petscstack->currentsize] = PETSC_TRUE; petscstack->currentsize
++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE
|| petscstack->hotdepth); } ; } while (0); ; } while (0);

557

ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),557,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

558

ierr = DMGetCoordinatesLocal(dm, &coordinates);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),558,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

559

ierr = DMGetCoordinateSection(dm, &coordSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),559,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

560

ierr = DMPlexGetDepthLabel(dm, &depthLabel);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),560,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

561

ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),561,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

562

ierr = PetscSectionGetChart(coordSection, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),562,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

563

ierr = VecGetArrayRead(coordinates, &a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),563,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

564

name[0] = "vertex";

565

name[1] = "edge";

566

name[dim-1] = "face";

567

name[dim] = "cell";

568

for (c = cStart; c < cEnd; ++c) {

569

PetscInt *closure = NULL((void*)0);

570

PetscInt closureSize, cl;

571

572

ierr = PetscViewerASCIIPrintf(viewer, "Geometry for cell %D:\n", c);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),572,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

573

ierr = DMPlexGetTransitiveClosure(dm, c, PETSC_TRUE, &closureSize, &closure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),573,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

574

ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),574,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

575

for (cl = 0; cl < closureSize*2; cl += 2) {

576

PetscInt point = closure[cl], depth, dof, off, d, p;

577

578

if ((point < pStart) || (point >= pEnd)) continue;

579

ierr = PetscSectionGetDof(coordSection, point, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),579,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

580

if (!dof) continue;

581

ierr = DMLabelGetValue(depthLabel, point, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),581,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

582

ierr = PetscSectionGetOffset(coordSection, point, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),582,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

583

ierr = PetscViewerASCIIPrintf(viewer, "%s %D coords:", name[depth], point);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),583,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

584

for (p = 0; p < dof/dim; ++p) {

585

ierr = PetscViewerASCIIPrintf(viewer, " (");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),585,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

586

for (d = 0; d < dim; ++d) {

587

if (d > 0) {ierr = PetscViewerASCIIPrintf(viewer, ", ");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),587,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

588

ierr = PetscViewerASCIIPrintf(viewer, "%g", PetscRealPart(a[off+p*dim+d])(a[off+p*dim+d]));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),588,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

589

}

590

ierr = PetscViewerASCIIPrintf(viewer, ")");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),590,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

591

}

592

ierr = PetscViewerASCIIPrintf(viewer, "\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),592,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

593

}

594

ierr = DMPlexRestoreTransitiveClosure(dm, c, PETSC_TRUE, &closureSize, &closure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),594,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

595

ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),595,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

596

}

597

ierr = VecRestoreArrayRead(coordinates, &a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),597,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

598

599

}

600

601

static PetscErrorCode DMPlexView_Ascii(DM dm, PetscViewer viewer)

602

{

603

DM_Plex *mesh = (DM_Plex*) dm->data;

604

DM cdm;

605

DMLabel markers;

606

PetscSection coordSection;

607

Vec coordinates;

608

PetscViewerFormat format;

609

PetscErrorCode ierr;

610

611

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 611; petscstack->petscroutine
[petscstack->currentsize] = PETSC_TRUE; petscstack->currentsize
++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE
|| petscstack->hotdepth); } ; } while (0); ; } while (0);

612

ierr = DMGetCoordinateDM(dm, &cdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),612,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

613

ierr = DMGetSection(cdm, &coordSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),613,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

614

ierr = DMGetCoordinatesLocal(dm, &coordinates);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),614,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

615

ierr = PetscViewerGetFormat(viewer, &format);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),615,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

616

if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {

617

const char *name;

618

PetscInt dim, cellHeight, maxConeSize, maxSupportSize;

619

PetscInt pStart, pEnd, p;

620

PetscMPIInt rank, size;

621

622

ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm), &rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),622,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

623

ierr = MPI_Comm_size(PetscObjectComm((PetscObject)dm), &size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),623,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

624

ierr = PetscObjectGetName((PetscObject) dm, &name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),624,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

625

ierr = DMPlexGetChart(dm, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),625,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

626

ierr = DMPlexGetMaxSizes(dm, &maxConeSize, &maxSupportSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),626,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

627

ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),627,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

628

ierr = DMPlexGetVTKCellHeight(dm, &cellHeight);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),628,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

629

if (name) {ierr = PetscViewerASCIIPrintf(viewer, "%s in %D dimension%s:\n", name, dim, dim == 1 ? "" : "s");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),629,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

630

else {ierr = PetscViewerASCIIPrintf(viewer, "Mesh in %D dimension%s:\n", dim, dim == 1 ? "" : "s");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),630,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

631

if (cellHeight) {ierr = PetscViewerASCIIPrintf(viewer, " Cells are at height %D\n", cellHeight);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),631,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

632

ierr = PetscViewerASCIIPrintf(viewer, "Supports:\n", name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),632,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

633

ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),633,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

634

ierr = PetscViewerASCIISynchronizedPrintf(viewer, "[%d] Max support size: %D\n", rank, maxSupportSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),634,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

635

for (p = pStart; p < pEnd; ++p) {

636

PetscInt dof, off, s;

637

638

ierr = PetscSectionGetDof(mesh->supportSection, p, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),638,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

639

ierr = PetscSectionGetOffset(mesh->supportSection, p, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),639,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

640

for (s = off; s < off+dof; ++s) {

641

ierr = PetscViewerASCIISynchronizedPrintf(viewer, "[%d]: %D ----> %D\n", rank, p, mesh->supports[s]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),641,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

642

}

643

}

644

ierr = PetscViewerFlush(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),644,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

645

ierr = PetscViewerASCIIPrintf(viewer, "Cones:\n", name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),645,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

646

ierr = PetscViewerASCIISynchronizedPrintf(viewer, "[%d] Max cone size: %D\n", rank, maxConeSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),646,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

647

for (p = pStart; p < pEnd; ++p) {

648

PetscInt dof, off, c;

649

650

ierr = PetscSectionGetDof(mesh->coneSection, p, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),650,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

651

ierr = PetscSectionGetOffset(mesh->coneSection, p, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),651,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

652

for (c = off; c < off+dof; ++c) {

653

ierr = PetscViewerASCIISynchronizedPrintf(viewer, "[%d]: %D <---- %D (%D)\n", rank, p, mesh->cones[c], mesh->coneOrientations[c]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),653,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

654

}

655

}

656

ierr = PetscViewerFlush(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),656,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

657

ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),657,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

658

if (coordSection && coordinates) {

659

ierr = PetscSectionVecView(coordSection, coordinates, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),659,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

660

}

661

ierr = DMGetLabel(dm, "marker", &markers);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),661,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

662

if (markers) {ierr = DMLabelView(markers,viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),662,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

663

if (size > 1) {

664

PetscSF sf;

665

666

ierr = DMGetPointSF(dm, &sf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),666,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

667

ierr = PetscSFView(sf, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),667,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

668

}

669

ierr = PetscViewerFlush(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),669,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

670

} else if (format == PETSC_VIEWER_ASCII_LATEX) {

671

const char *name, *color;

672

const char *defcolors[3] = {"gray", "orange", "green"};

673

const char *deflcolors[4] = {"blue", "cyan", "red", "magenta"};

674

PetscReal scale = 2.0;

675

PetscReal tikzscale = 1.0;

676

PetscBool useNumbers = PETSC_TRUE, useLabels, useColors;

677

double tcoords[3];

678

PetscScalar *coords;

679

PetscInt numLabels, l, numColors, numLColors, dim, depth, cStart, cEnd, c, vStart, vEnd, v, eStart = 0, eEnd = 0, e, p;

680

PetscMPIInt rank, size;

681

char **names, **colors, **lcolors;

682

PetscBool plotEdges, flg;

683

684

ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),684,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

685

ierr = DMPlexGetDepth(dm, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),685,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

686

ierr = DMGetNumLabels(dm, &numLabels);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),686,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

687

numLabels = PetscMax(numLabels, 10)(((numLabels)<(10)) ? (10) : (numLabels));

688

numColors = 10;

689

numLColors = 10;

690

ierr = PetscCalloc3(numLabels, &names, numColors, &colors, numLColors, &lcolors)PetscMallocA(3,PETSC_TRUE,690,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(numLabels)*sizeof(**(&names)),(&names),(size_t
)(numColors)*sizeof(**(&colors)),(&colors),(size_t)(numLColors
)*sizeof(**(&lcolors)),(&lcolors));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),690,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

691

ierr = PetscOptionsGetReal(((PetscObject) viewer)->options,((PetscObject) viewer)->prefix, "-dm_plex_view_scale", &scale, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),691,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

692

ierr = PetscOptionsGetReal(((PetscObject) viewer)->options,((PetscObject) viewer)->prefix, "-dm_plex_view_tikzscale", &tikzscale, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),692,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

693

ierr = PetscOptionsGetBool(((PetscObject) viewer)->options,((PetscObject) viewer)->prefix, "-dm_plex_view_numbers", &useNumbers, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),693,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

694

ierr = PetscOptionsGetStringArray(((PetscObject) viewer)->options,((PetscObject) viewer)->prefix, "-dm_plex_view_labels", names, &numLabels, &useLabels);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),694,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

695

if (!useLabels) numLabels = 0;

696

ierr = PetscOptionsGetStringArray(((PetscObject) viewer)->options,((PetscObject) viewer)->prefix, "-dm_plex_view_colors", colors, &numColors, &useColors);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),696,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

697

if (!useColors) {

698

numColors = 3;

699

for (c = 0; c < numColors; ++c) {ierr = PetscStrallocpy(defcolors[c], &colors[c]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),699,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

700

}

701

ierr = PetscOptionsGetStringArray(((PetscObject) viewer)->options,((PetscObject) viewer)->prefix, "-dm_plex_view_lcolors", lcolors, &numLColors, &useColors);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),701,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

702

if (!useColors) {

703

numLColors = 4;

704

for (c = 0; c < numLColors; ++c) {ierr = PetscStrallocpy(deflcolors[c], &lcolors[c]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),704,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

705

}

706

plotEdges = (PetscBool)(depth > 1 && useNumbers && dim < 3);

707

ierr = PetscOptionsGetBool(((PetscObject) viewer)->options,((PetscObject) viewer)->prefix, "-dm_plex_view_edges", &plotEdges, &flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),707,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

708

if (flg && plotEdges && depth < dim) SETERRQ(PetscObjectComm((PetscObject) dm), PETSC_ERR_SUP, "Mesh must be interpolated")return PetscError(PetscObjectComm((PetscObject) dm),708,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",56,PETSC_ERROR_INITIAL
,"Mesh must be interpolated");

709

if (depth < dim) plotEdges = PETSC_FALSE;

710

ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)dm), &rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),710,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

711

ierr = MPI_Comm_size(PetscObjectComm((PetscObject)dm), &size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),711,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

712

ierr = PetscObjectGetName((PetscObject) dm, &name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),712,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

713

ierr = PetscViewerASCIIPrintf(viewer, "\

714

\\documentclass[tikz]{standalone}\n\n\

715

\\usepackage{pgflibraryshapes}\n\

716

\\usetikzlibrary{backgrounds}\n\

717

\\usetikzlibrary{arrows}\n\

718

\\begin{document}\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),718,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

719

if (size > 1) {

720

ierr = PetscViewerASCIIPrintf(viewer, "%s for process ", name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),720,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

721

for (p = 0; p < size; ++p) {

722

if (p > 0 && p == size-1) {

723

ierr = PetscViewerASCIIPrintf(viewer, ", and ", colors[p%numColors], p);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),723,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

724

} else if (p > 0) {

725

ierr = PetscViewerASCIIPrintf(viewer, ", ", colors[p%numColors], p);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),725,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

726

}

727

ierr = PetscViewerASCIIPrintf(viewer, "{\\textcolor{%s}%D}", colors[p%numColors], p);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),727,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

728

}

729

ierr = PetscViewerASCIIPrintf(viewer, ".\n\n\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),729,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

730

}

731

ierr = PetscViewerASCIIPrintf(viewer, "\\begin{tikzpicture}[scale = %g,font=\\fontsize{8}{8}\\selectfont]\n", tikzscale);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),731,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

732

/* Plot vertices */

733

ierr = DMPlexGetDepthStratum(dm, 0, &vStart, &vEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),733,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

734

ierr = VecGetArray(coordinates, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),734,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

735

ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),735,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

736

for (v = vStart; v < vEnd; ++v) {

737

PetscInt off, dof, d;

738

PetscBool isLabeled = PETSC_FALSE;

739

740

ierr = PetscSectionGetDof(coordSection, v, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),740,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

741

ierr = PetscSectionGetOffset(coordSection, v, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),741,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

742

ierr = PetscViewerASCIISynchronizedPrintf(viewer, "\\path (");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),742,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

743

if (PetscUnlikely(dof > 3)__builtin_expect(!!(dof > 3),0)) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_PLIB,"coordSection vertex %D has dof %D > 3",v,dof)return PetscError(((MPI_Comm)0x44000001),743,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,77,PETSC_ERROR_INITIAL,"coordSection vertex %D has dof %D > 3"
,v,dof);

744

for (d = 0; d < dof; ++d) {

745

tcoords[d] = (double) (scale*PetscRealPart(coords[off+d])(coords[off+d]));

746

tcoords[d] = PetscAbs(tcoords[d])(((tcoords[d]) >= 0) ? (tcoords[d]) : (-(tcoords[d]))) < 1e-10 ? 0.0 : tcoords[d];

747

}

748

/* Rotate coordinates since PGF makes z point out of the page instead of up */

749

if (dim == 3) {PetscReal tmp = tcoords[1]; tcoords[1] = tcoords[2]; tcoords[2] = -tmp;}

750

for (d = 0; d < dof; ++d) {

751

if (d > 0) {ierr = PetscViewerASCIISynchronizedPrintf(viewer, ",");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),751,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

752

ierr = PetscViewerASCIISynchronizedPrintf(viewer, "%g", tcoords[d]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),752,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

753

}

754

color = colors[rank%numColors];

755

for (l = 0; l < numLabels; ++l) {

756

PetscInt val;

757

ierr = DMGetLabelValue(dm, names[l], v, &val);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),757,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

758

if (val >= 0) {color = lcolors[l%numLColors]; isLabeled = PETSC_TRUE; break;}

759

}

760

if (useNumbers) {

761

ierr = PetscViewerASCIISynchronizedPrintf(viewer, ") node(%D_%d) [draw,shape=circle,color=%s] {%D};\n", v, rank, color, v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),761,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

762

} else {

763

ierr = PetscViewerASCIISynchronizedPrintf(viewer, ") node(%D_%d) [fill,inner sep=%dpt,shape=circle,color=%s] {};\n", v, rank, !isLabeled ? 1 : 2, color);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),763,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

764

}

765

}

766

ierr = VecRestoreArray(coordinates, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),766,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

767

ierr = PetscViewerFlush(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),767,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

768

/* Plot cells */

769

ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),769,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

770

ierr = DMPlexGetDepthStratum(dm, 1, &eStart, &eEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),770,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

771

if (dim == 3 || !useNumbers) {

772

for (e = eStart; e < eEnd; ++e) {

773

const PetscInt *cone;

774

775

color = colors[rank%numColors];

776

for (l = 0; l < numLabels; ++l) {

777

PetscInt val;

778

ierr = DMGetLabelValue(dm, names[l], e, &val);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),778,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

779

if (val >= 0) {color = lcolors[l%numLColors]; break;}

780

}

781

ierr = DMPlexGetCone(dm, e, &cone);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),781,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

782

ierr = PetscViewerASCIISynchronizedPrintf(viewer, "\\draw[color=%s] (%D_%d) -- (%D_%d);\n", color, cone[0], rank, cone[1], rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),782,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

783

}

784

} else {

785

for (c = cStart; c < cEnd; ++c) {

786

PetscInt *closure = NULL((void*)0);

787

PetscInt closureSize, firstPoint = -1;

788

789

ierr = DMPlexGetTransitiveClosure(dm, c, PETSC_TRUE, &closureSize, &closure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),789,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

790

ierr = PetscViewerASCIISynchronizedPrintf(viewer, "\\draw[color=%s] ", colors[rank%numColors]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),790,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

791

for (p = 0; p < closureSize*2; p += 2) {

792

const PetscInt point = closure[p];

793

794

if ((point < vStart) || (point >= vEnd)) continue;

795

if (firstPoint >= 0) {ierr = PetscViewerASCIISynchronizedPrintf(viewer, " -- ");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),795,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

796

ierr = PetscViewerASCIISynchronizedPrintf(viewer, "(%D_%d)", point, rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),796,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

797

if (firstPoint < 0) firstPoint = point;

798

}

799

/* Why doesn't this work? ierr = PetscViewerASCIISynchronizedPrintf(viewer, " -- cycle;\n");CHKERRQ(ierr); */

800

ierr = PetscViewerASCIISynchronizedPrintf(viewer, " -- (%D_%d);\n", firstPoint, rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),800,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

801

ierr = DMPlexRestoreTransitiveClosure(dm, c, PETSC_TRUE, &closureSize, &closure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),801,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

802

}

803

}

804

ierr = VecGetArray(coordinates, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),804,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

805

for (c = cStart; c < cEnd; ++c) {

806

double ccoords[3] = {0.0, 0.0, 0.0};

807

PetscBool isLabeled = PETSC_FALSE;

808

PetscInt *closure = NULL((void*)0);

809

PetscInt closureSize, dof, d, n = 0;

810

811

ierr = DMPlexGetTransitiveClosure(dm, c, PETSC_TRUE, &closureSize, &closure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),811,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

812

ierr = PetscViewerASCIISynchronizedPrintf(viewer, "\\path (");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),812,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

813

for (p = 0; p < closureSize*2; p += 2) {

814

const PetscInt point = closure[p];

815

PetscInt off;

816

817

if ((point < vStart) || (point >= vEnd)) continue;

818

ierr = PetscSectionGetDof(coordSection, point, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),818,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

819

ierr = PetscSectionGetOffset(coordSection, point, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),819,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

820

for (d = 0; d < dof; ++d) {

821

tcoords[d] = (double) (scale*PetscRealPart(coords[off+d])(coords[off+d]));

822

tcoords[d] = PetscAbs(tcoords[d])(((tcoords[d]) >= 0) ? (tcoords[d]) : (-(tcoords[d]))) < 1e-10 ? 0.0 : tcoords[d];

823

}

824

/* Rotate coordinates since PGF makes z point out of the page instead of up */

825

if (dof == 3) {PetscReal tmp = tcoords[1]; tcoords[1] = tcoords[2]; tcoords[2] = -tmp;}

826

for (d = 0; d < dof; ++d) {ccoords[d] += tcoords[d];}

827

++n;

828

}

829

for (d = 0; d < dof; ++d) {ccoords[d] /= n;}

830

ierr = DMPlexRestoreTransitiveClosure(dm, c, PETSC_TRUE, &closureSize, &closure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),830,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

831

for (d = 0; d < dof; ++d) {

832

if (d > 0) {ierr = PetscViewerASCIISynchronizedPrintf(viewer, ",");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),832,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

833

ierr = PetscViewerASCIISynchronizedPrintf(viewer, "%g", ccoords[d]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),833,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

834

}

835

color = colors[rank%numColors];

836

for (l = 0; l < numLabels; ++l) {

837

PetscInt val;

838

ierr = DMGetLabelValue(dm, names[l], c, &val);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),838,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

839

if (val >= 0) {color = lcolors[l%numLColors]; isLabeled = PETSC_TRUE; break;}

840

}

841

if (useNumbers) {

842

ierr = PetscViewerASCIISynchronizedPrintf(viewer, ") node(%D_%d) [draw,shape=circle,color=%s] {%D};\n", c, rank, color, c);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),842,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

843

} else {

844

ierr = PetscViewerASCIISynchronizedPrintf(viewer, ") node(%D_%d) [fill,inner sep=%dpt,shape=circle,color=%s] {};\n", c, rank, !isLabeled ? 1 : 2, color);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),844,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

845

}

846

}

847

ierr = VecRestoreArray(coordinates, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),847,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

848

/* Plot edges */

849

if (plotEdges) {

850

ierr = VecGetArray(coordinates, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),850,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

851

ierr = PetscViewerASCIIPrintf(viewer, "\\path\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),851,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

852

for (e = eStart; e < eEnd; ++e) {

853

const PetscInt *cone;

854

PetscInt coneSize, offA, offB, dof, d;

855

856

ierr = DMPlexGetConeSize(dm, e, &coneSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),856,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

857

if (coneSize != 2) SETERRQ2(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONG, "Edge %D cone should have two vertices, not %D", e, coneSize)return PetscError(PetscObjectComm((PetscObject)dm),857,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Edge %D cone should have two vertices, not %D",e,coneSize);

858

ierr = DMPlexGetCone(dm, e, &cone);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),858,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

859

ierr = PetscSectionGetDof(coordSection, cone[0], &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),859,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

860

ierr = PetscSectionGetOffset(coordSection, cone[0], &offA);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),860,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

861

ierr = PetscSectionGetOffset(coordSection, cone[1], &offB);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),861,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

862

ierr = PetscViewerASCIISynchronizedPrintf(viewer, "(");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),862,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

863

for (d = 0; d < dof; ++d) {

864

tcoords[d] = (double) (0.5*scale*PetscRealPart(coords[offA+d]+coords[offB+d])(coords[offA+d]+coords[offB+d]));

865

tcoords[d] = PetscAbs(tcoords[d])(((tcoords[d]) >= 0) ? (tcoords[d]) : (-(tcoords[d]))) < 1e-10 ? 0.0 : tcoords[d];

866

}

867

/* Rotate coordinates since PGF makes z point out of the page instead of up */

868

if (dim == 3) {PetscReal tmp = tcoords[1]; tcoords[1] = tcoords[2]; tcoords[2] = -tmp;}

869

for (d = 0; d < dof; ++d) {

870

if (d > 0) {ierr = PetscViewerASCIISynchronizedPrintf(viewer, ",");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),870,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

871

ierr = PetscViewerASCIISynchronizedPrintf(viewer, "%g", (double)tcoords[d]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),871,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

872

}

873

color = colors[rank%numColors];

874

for (l = 0; l < numLabels; ++l) {

875

PetscInt val;

876

ierr = DMGetLabelValue(dm, names[l], v, &val);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),876,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

877

if (val >= 0) {color = lcolors[l%numLColors]; break;}

878

}

879

ierr = PetscViewerASCIISynchronizedPrintf(viewer, ") node(%D_%d) [draw,shape=circle,color=%s] {%D} --\n", e, rank, color, e);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),879,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

880

}

881

ierr = VecRestoreArray(coordinates, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),881,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

882

ierr = PetscViewerFlush(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),882,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

883

ierr = PetscViewerASCIIPrintf(viewer, "(0,0);\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),883,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

884

}

885

ierr = PetscViewerFlush(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),885,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

886

ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),886,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

887

ierr = PetscViewerASCIIPrintf(viewer, "\\end{tikzpicture}\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),887,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

888

ierr = PetscViewerASCIIPrintf(viewer, "\\end{document}\n", name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),888,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

889

for (l = 0; l < numLabels; ++l) {ierr = PetscFree(names[l])((*PetscTrFree)((void*)(names[l]),889,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((names[l]) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),889,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

890

for (c = 0; c < numColors; ++c) {ierr = PetscFree(colors[c])((*PetscTrFree)((void*)(colors[c]),890,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((colors[c]) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),890,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

891

for (c = 0; c < numLColors; ++c) {ierr = PetscFree(lcolors[c])((*PetscTrFree)((void*)(lcolors[c]),891,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((lcolors[c]) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),891,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

892

ierr = PetscFree3(names, colors, lcolors)PetscFreeA(3,892,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,&(names),&(colors),&(lcolors));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),892,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

893

} else if (format == PETSC_VIEWER_LOAD_BALANCE) {

894

Vec cown,acown;

895

VecScatter sct;

896

ISLocalToGlobalMapping g2l;

897

IS gid,acis;

898

MPI_Comm comm,ncomm = MPI_COMM_NULL((MPI_Comm)0x04000000);

899

MPI_Group ggroup,ngroup;

900

PetscScalar *array,nid;

901

const PetscInt *idxs;

902

PetscInt *idxs2,*start,*adjacency,*work;

903

PetscInt64 lm[3],gm[3];

904

PetscInt i,c,cStart,cEnd,cum,numVertices,ect,ectn,cellHeight;

905

PetscMPIInt d1,d2,rank;

906

907

ierr = PetscObjectGetComm((PetscObject)dm,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),907,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

908

ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),908,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

909

#if defined(PETSC_HAVE_MPI_SHARED_COMM1)

910

ierr = MPI_Comm_split_type(comm,MPI_COMM_TYPE_SHARED1,rank,MPI_INFO_NULL((MPI_Info)0x1c000000),&ncomm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),910,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

911

#endif

912

if (ncomm != MPI_COMM_NULL((MPI_Comm)0x04000000)) {

913

ierr = MPI_Comm_group(comm,&ggroup);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),913,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

914

ierr = MPI_Comm_group(ncomm,&ngroup);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),914,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

915

d1 = 0;

916

ierr = MPI_Group_translate_ranks(ngroup,1,&d1,ggroup,&d2);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),916,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

917

nid = d2;

918

ierr = MPI_Group_free(&ggroup);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),918,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

919

ierr = MPI_Group_free(&ngroup);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),919,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

920

ierr = MPI_Comm_free(&ncomm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),920,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

921

} else nid = 0.0;

922

923

/* Get connectivity */

924

ierr = DMPlexGetVTKCellHeight(dm,&cellHeight);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),924,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

925

ierr = DMPlexCreatePartitionerGraph(dm,cellHeight,&numVertices,&start,&adjacency,&gid);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),925,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

926

927

/* filter overlapped local cells */

928

ierr = DMPlexGetHeightStratum(dm,cellHeight,&cStart,&cEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),928,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

929

ierr = ISGetIndices(gid,&idxs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),929,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

930

ierr = ISGetLocalSize(gid,&cum);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),930,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

931

ierr = PetscMalloc1(cum,&idxs2)PetscMallocA(1,PETSC_FALSE,931,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(cum)*sizeof(**(&idxs2)),(&idxs2));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),931,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

932

for (c = cStart, cum = 0; c < cEnd; c++) {

933

if (idxs[c-cStart] < 0) continue;

934

idxs2[cum++] = idxs[c-cStart];

935

}

936

ierr = ISRestoreIndices(gid,&idxs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),936,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

937

if (numVertices != cum) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Unexpected %D != %D",numVertices,cum)return PetscError(((MPI_Comm)0x44000001),937,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,77,PETSC_ERROR_INITIAL,"Unexpected %D != %D",numVertices,cum
);

938

ierr = ISDestroy(&gid);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),938,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

939

ierr = ISCreateGeneral(comm,numVertices,idxs2,PETSC_OWN_POINTER,&gid);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),939,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

940

941

/* support for node-aware cell locality */

942

ierr = ISCreateGeneral(comm,start[numVertices],adjacency,PETSC_USE_POINTER,&acis);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),942,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

943

ierr = VecCreateSeq(PETSC_COMM_SELF((MPI_Comm)0x44000001),start[numVertices],&acown);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),943,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

944

ierr = VecCreateMPI(comm,numVertices,PETSC_DECIDE-1,&cown);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),944,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

945

ierr = VecGetArray(cown,&array);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),945,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

946

for (c = 0; c < numVertices; c++) array[c] = nid;

947

ierr = VecRestoreArray(cown,&array);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),947,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

948

ierr = VecScatterCreate(cown,acis,acown,NULL((void*)0),&sct);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),948,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

949

ierr = VecScatterBegin(sct,cown,acown,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),949,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

950

ierr = VecScatterEnd(sct,cown,acown,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),950,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

951

ierr = ISDestroy(&acis);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),951,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

952

ierr = VecScatterDestroy(&sct);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),952,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

953

ierr = VecDestroy(&cown);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),953,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

954

955

/* compute edgeCut */

956

for (c = 0, cum = 0; c < numVertices; c++) cum = PetscMax(cum,start[c+1]-start[c])(((cum)<(start[c+1]-start[c])) ? (start[c+1]-start[c]) : (
cum));

957

ierr = PetscMalloc1(cum,&work)PetscMallocA(1,PETSC_FALSE,957,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(cum)*sizeof(**(&work)),(&work));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),957,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

958

ierr = ISLocalToGlobalMappingCreateIS(gid,&g2l);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),958,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

959

ierr = ISLocalToGlobalMappingSetType(g2l,ISLOCALTOGLOBALMAPPINGHASH"hash");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),959,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

960

ierr = ISDestroy(&gid);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),960,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

961

ierr = VecGetArray(acown,&array);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),961,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

962

for (c = 0, ect = 0, ectn = 0; c < numVertices; c++) {

963

PetscInt totl;

964

965

totl = start[c+1]-start[c];

966

ierr = ISGlobalToLocalMappingApply(g2l,IS_GTOLM_MASK,totl,adjacency+start[c],NULL((void*)0),work);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),966,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

967

for (i = 0; i < totl; i++) {

968

if (work[i] < 0) {

969

ect += 1;

970

ectn += (array[i + start[c]] != nid) ? 0 : 1;

971

}

972

}

973

}

974

ierr = PetscFree(work)((*PetscTrFree)((void*)(work),974,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((work) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),974,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

975

ierr = VecRestoreArray(acown,&array);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),975,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

976

lm[0] = numVertices > 0 ? numVertices : PETSC_MAX_INT2147483647;

977

lm[1] = -numVertices;

978

ierr = MPIU_Allreduce(lm,gm,2,MPIU_INT64,MPI_MIN,comm)(PetscAllreduceBarrierCheck(comm,2,978,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((petsc_allreduce_ct += PetscMPIParallelComm((comm)),0) ||
MPI_Allreduce((lm),(gm),(2),(((MPI_Datatype)0x4c00083a)),((MPI_Op
)(0x58000002)),(comm))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),978,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

979

ierr = PetscViewerASCIIPrintf(viewer," Cell balance: %.2f (max %D, min %D",-((double)gm[1])/((double)gm[0]),-(PetscInt)gm[1],(PetscInt)gm[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),979,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

980

lm[0] = ect; /* edgeCut */

981

lm[1] = ectn; /* node-aware edgeCut */

982

lm[2] = numVertices > 0 ? 0 : 1; /* empty processes */

983

ierr = MPIU_Allreduce(lm,gm,3,MPIU_INT64,MPI_SUM,comm)(PetscAllreduceBarrierCheck(comm,3,983,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((petsc_allreduce_ct += PetscMPIParallelComm((comm)),0) ||
MPI_Allreduce((lm),(gm),(3),(((MPI_Datatype)0x4c00083a)),((MPI_Op
)(0x58000003)),(comm))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),983,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

984

ierr = PetscViewerASCIIPrintf(viewer,", empty %D)\n",(PetscInt)gm[2]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),984,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

985

#if defined(PETSC_HAVE_MPI_SHARED_COMM1)

986

ierr = PetscViewerASCIIPrintf(viewer," Edge Cut: %D (on node %.3f)\n",(PetscInt)(gm[0]/2),gm[0] ? ((double)(gm[1]))/((double)gm[0]) : 1.);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),986,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

987

#else

988

ierr = PetscViewerASCIIPrintf(viewer," Edge Cut: %D (on node %.3f)\n",(PetscInt)(gm[0]/2),0.0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),988,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

989

#endif

990

ierr = ISLocalToGlobalMappingDestroy(&g2l);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),990,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

991

ierr = PetscFree(start)((*PetscTrFree)((void*)(start),991,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((start) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),991,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

992

ierr = PetscFree(adjacency)((*PetscTrFree)((void*)(adjacency),992,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((adjacency) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),992,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

993

ierr = VecDestroy(&acown);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),993,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

994

} else {

995

MPI_Comm comm;

996

PetscInt *sizes, *hybsizes;

997

PetscInt locDepth, depth, cellHeight, dim, d, pMax[4];

998

PetscInt pStart, pEnd, p;

999

PetscInt numLabels, l;

1000

const char *name;

1001

PetscMPIInt size;

1002

1003

ierr = PetscObjectGetComm((PetscObject)dm,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1003,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1004

ierr = MPI_Comm_size(comm, &size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1004,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1005

ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1005,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1006

ierr = DMPlexGetVTKCellHeight(dm, &cellHeight);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1006,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1007

ierr = PetscObjectGetName((PetscObject) dm, &name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1007,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1008

if (name) {ierr = PetscViewerASCIIPrintf(viewer, "%s in %D dimension%s:\n", name, dim, dim == 1 ? "" : "s");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1008,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1009

else {ierr = PetscViewerASCIIPrintf(viewer, "Mesh in %D dimension%s:\n", dim, dim == 1 ? "" : "s");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1009,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1010

if (cellHeight) {ierr = PetscViewerASCIIPrintf(viewer, " Cells are at height %D\n", cellHeight);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1010,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1011

ierr = DMPlexGetDepth(dm, &locDepth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1011,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1012

ierr = MPIU_Allreduce(&locDepth, &depth, 1, MPIU_INT, MPI_MAX, comm)(PetscAllreduceBarrierCheck(comm,1,1012,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((petsc_allreduce_ct += PetscMPIParallelComm((comm)),0) ||
MPI_Allreduce((&locDepth),(&depth),(1),(((MPI_Datatype
)0x4c000405)),((MPI_Op)(0x58000001)),(comm))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1012,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1013

ierr = DMPlexGetHybridBounds(dm, &pMax[depth], depth > 0 ? &pMax[depth-1] : NULL((void*)0), depth > 1 ? &pMax[depth - 2] : NULL((void*)0), &pMax[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1013,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1014

ierr = PetscCalloc2(size,&sizes,size,&hybsizes)PetscMallocA(2,PETSC_TRUE,1014,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(size)*sizeof(**(&sizes)),(&sizes),(size_t)(
size)*sizeof(**(&hybsizes)),(&hybsizes));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1014,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1015

if (depth == 1) {

1016

ierr = DMPlexGetDepthStratum(dm, 0, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1016,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1017

pEnd = pEnd - pStart;

1018

pMax[0] -= pStart;

1019

ierr = MPI_Gather(&pEnd, 1, MPIU_INT, sizes, 1, MPIU_INT, 0, comm)((petsc_gather_ct++,0) || PetscMPITypeSize((&petsc_send_len
),(1),(((MPI_Datatype)0x4c000405))) || MPI_Gather((&pEnd)
,(1),(((MPI_Datatype)0x4c000405)),(sizes),(1),(((MPI_Datatype
)0x4c000405)),(0),(comm)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1019,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1020

ierr = MPI_Gather(&pMax[0], 1, MPIU_INT, hybsizes, 1, MPIU_INT, 0, comm)((petsc_gather_ct++,0) || PetscMPITypeSize((&petsc_send_len
),(1),(((MPI_Datatype)0x4c000405))) || MPI_Gather((&pMax[
0]),(1),(((MPI_Datatype)0x4c000405)),(hybsizes),(1),(((MPI_Datatype
)0x4c000405)),(0),(comm)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1020,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1021

ierr = PetscViewerASCIIPrintf(viewer, " %d-cells:", 0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1021,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1022

for (p = 0; p < size; ++p) {

1023

if (hybsizes[p] >= 0) {ierr = PetscViewerASCIIPrintf(viewer, " %D (%D)", sizes[p], sizes[p] - hybsizes[p]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1023,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1024

else {ierr = PetscViewerASCIIPrintf(viewer, " %D", sizes[p]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1024,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1025

}

1026

ierr = PetscViewerASCIIPrintf(viewer, "\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1026,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1027

ierr = DMPlexGetHeightStratum(dm, 0, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1027,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1028

pEnd = pEnd - pStart;

1029

pMax[depth] -= pStart;

1030

ierr = MPI_Gather(&pEnd, 1, MPIU_INT, sizes, 1, MPIU_INT, 0, comm)((petsc_gather_ct++,0) || PetscMPITypeSize((&petsc_send_len
),(1),(((MPI_Datatype)0x4c000405))) || MPI_Gather((&pEnd)
,(1),(((MPI_Datatype)0x4c000405)),(sizes),(1),(((MPI_Datatype
)0x4c000405)),(0),(comm)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1030,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1031

ierr = MPI_Gather(&pMax[depth], 1, MPIU_INT, hybsizes, 1, MPIU_INT, 0, comm)((petsc_gather_ct++,0) || PetscMPITypeSize((&petsc_send_len
),(1),(((MPI_Datatype)0x4c000405))) || MPI_Gather((&pMax[
depth]),(1),(((MPI_Datatype)0x4c000405)),(hybsizes),(1),(((MPI_Datatype
)0x4c000405)),(0),(comm)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1031,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1032

ierr = PetscViewerASCIIPrintf(viewer, " %D-cells:", dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1032,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1033

for (p = 0; p < size; ++p) {

1034

if (hybsizes[p] >= 0) {ierr = PetscViewerASCIIPrintf(viewer, " %D (%D)", sizes[p], sizes[p] - hybsizes[p]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1034,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1035

else {ierr = PetscViewerASCIIPrintf(viewer, " %D", sizes[p]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1035,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1036

}

1037

ierr = PetscViewerASCIIPrintf(viewer, "\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1037,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1038

} else {

1039

PetscMPIInt rank;

1040

ierr = MPI_Comm_rank(comm, &rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1040,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1041

for (d = 0; d <= dim; d++) {

1042

ierr = DMPlexGetDepthStratum(dm, d, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1042,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1043

pEnd -= pStart;

1044

pMax[d] -= pStart;

1045

ierr = MPI_Gather(&pEnd, 1, MPIU_INT, sizes, 1, MPIU_INT, 0, comm)((petsc_gather_ct++,0) || PetscMPITypeSize((&petsc_send_len
),(1),(((MPI_Datatype)0x4c000405))) || MPI_Gather((&pEnd)
,(1),(((MPI_Datatype)0x4c000405)),(sizes),(1),(((MPI_Datatype
)0x4c000405)),(0),(comm)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1045,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1046

ierr = MPI_Gather(&pMax[d], 1, MPIU_INT, hybsizes, 1, MPIU_INT, 0, comm)((petsc_gather_ct++,0) || PetscMPITypeSize((&petsc_send_len
),(1),(((MPI_Datatype)0x4c000405))) || MPI_Gather((&pMax[
d]),(1),(((MPI_Datatype)0x4c000405)),(hybsizes),(1),(((MPI_Datatype
)0x4c000405)),(0),(comm)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1046,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1047

ierr = PetscViewerASCIIPrintf(viewer, " %D-cells:", d);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1047,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1048

for (p = 0; p < size; ++p) {

1049

if (!rank) {

1050

if (hybsizes[p] >= 0) {ierr = PetscViewerASCIIPrintf(viewer, " %D (%D)", sizes[p], sizes[p] - hybsizes[p]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1050,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1051

else {ierr = PetscViewerASCIIPrintf(viewer, " %D", sizes[p]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1051,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1052

}

1053

}

1054

ierr = PetscViewerASCIIPrintf(viewer, "\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1054,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1055

}

1056

}

1057

ierr = PetscFree2(sizes,hybsizes)PetscFreeA(2,1057,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,&(sizes),&(hybsizes));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1057,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1058

ierr = DMGetNumLabels(dm, &numLabels);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1058,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1059

if (numLabels) {ierr = PetscViewerASCIIPrintf(viewer, "Labels:\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1059,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1060

for (l = 0; l < numLabels; ++l) {

1061

DMLabel label;

1062

const char *name;

1063

IS valueIS;

1064

const PetscInt *values;

1065

PetscInt numValues, v;

1066

1067

ierr = DMGetLabelName(dm, l, &name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1067,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1068

ierr = DMGetLabel(dm, name, &label);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1068,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1069

ierr = DMLabelGetNumValues(label, &numValues);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1069,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1070

ierr = PetscViewerASCIIPrintf(viewer, " %s: %D strata with value/size (", name, numValues);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1070,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1071

ierr = DMLabelGetValueIS(label, &valueIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1071,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1072

ierr = ISGetIndices(valueIS, &values);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1072,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1073

ierr = PetscViewerASCIIUseTabs(viewer, PETSC_FALSE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1073,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1074

for (v = 0; v < numValues; ++v) {

1075

PetscInt size;

1076

1077

ierr = DMLabelGetStratumSize(label, values[v], &size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1077,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1078

if (v > 0) {ierr = PetscViewerASCIIPrintf(viewer, ", ");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1078,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1079

ierr = PetscViewerASCIIPrintf(viewer, "%D (%D)", values[v], size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1079,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1080

}

1081

ierr = PetscViewerASCIIPrintf(viewer, ")\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1081,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1082

ierr = PetscViewerASCIIUseTabs(viewer, PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1082,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1083

ierr = ISRestoreIndices(valueIS, &values);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1083,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1084

ierr = ISDestroy(&valueIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1084,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1085

}

1086

/* If no fields are specified, people do not want to see adjacency */

1087

if (dm->Nf) {

1088

PetscInt f;

1089

1090

for (f = 0; f < dm->Nf; ++f) {

1091

const char *name;

1092

1093

ierr = PetscObjectGetName(dm->fields[f].disc, &name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1093,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1094

if (numLabels) {ierr = PetscViewerASCIIPrintf(viewer, "Field %s:\n", name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1094,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1095

ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1095,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1096

if (dm->fields[f].label) {ierr = DMLabelView(dm->fields[f].label, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1096,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1097

if (dm->fields[f].adjacency[0]) {

1098

if (dm->fields[f].adjacency[1]) {ierr = PetscViewerASCIIPrintf(viewer, "adjacency FVM++\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1098,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1099

else {ierr = PetscViewerASCIIPrintf(viewer, "adjacency FVM\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1099,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1100

} else {

1101

if (dm->fields[f].adjacency[1]) {ierr = PetscViewerASCIIPrintf(viewer, "adjacency FEM\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1101,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1102

else {ierr = PetscViewerASCIIPrintf(viewer, "adjacency FUNKY\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1102,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

1103

}

1104

ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1104,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1105

}

1106

}

1107

ierr = DMGetCoarseDM(dm, &cdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1107,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1108

if (cdm) {

1109

ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1109,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1110

ierr = DMPlexView_Ascii(cdm, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1110,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1111

ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1111,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1112

}

1113

}

1114

1115

}

1116

1117

static PetscErrorCode DMPlexView_Draw(DM dm, PetscViewer viewer)

1118

{

1119

PetscDraw draw;

1120

DM cdm;

1121

PetscSection coordSection;

1122

Vec coordinates;

1123

const PetscScalar *coords;

1124

PetscReal xyl[2],xyr[2],bound[4] = {PETSC_MAX_REAL1.7976931348623157e+308, PETSC_MAX_REAL1.7976931348623157e+308, PETSC_MIN_REAL(-1.7976931348623157e+308), PETSC_MIN_REAL(-1.7976931348623157e+308)};

1125

PetscBool isnull;

1126

PetscInt dim, vStart, vEnd, cStart, cEnd, c, N;

1127

PetscMPIInt rank;

1128

PetscErrorCode ierr;

1129

1130

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1130; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1131

ierr = DMGetCoordinateDim(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1131,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1132

if (dim != 2) SETERRQ1(PetscObjectComm((PetscObject) dm), PETSC_ERR_SUP, "Cannot draw meshes of dimension %D", dim)return PetscError(PetscObjectComm((PetscObject) dm),1132,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",56,PETSC_ERROR_INITIAL
,"Cannot draw meshes of dimension %D",dim);

1133

ierr = DMGetCoordinateDM(dm, &cdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1133,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1134

ierr = DMGetSection(cdm, &coordSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1134,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1135

ierr = DMGetCoordinatesLocal(dm, &coordinates);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1135,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1136

ierr = DMPlexGetDepthStratum(dm, 0, &vStart, &vEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1136,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1137

ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1137,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1138

1139

ierr = PetscViewerDrawGetDraw(viewer, 0, &draw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1139,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1140

ierr = PetscDrawIsNull(draw, &isnull);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1140,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1141

1142

ierr = PetscDrawSetTitle(draw, "Mesh");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1142,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1143

1144

ierr = VecGetLocalSize(coordinates, &N);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1144,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1145

ierr = VecGetArrayRead(coordinates, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1145,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1146

for (c = 0; c < N; c += dim) {

1147

1148

1149

}

1150

ierr = VecRestoreArrayRead(coordinates, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1150,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1151

ierr = MPIU_Allreduce(&bound[0],xyl,2,MPIU_REAL,MPIU_MIN,PetscObjectComm((PetscObject)dm))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject)dm),
2,1151,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm
((PetscObject)dm))),0) || MPI_Allreduce((&bound[0]),(xyl)
,(2),(((MPI_Datatype)0x4c00080b)),((MPI_Op)(0x58000002)),(PetscObjectComm
((PetscObject)dm)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1151,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1152

ierr = MPIU_Allreduce(&bound[2],xyr,2,MPIU_REAL,MPIU_MAX,PetscObjectComm((PetscObject)dm))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject)dm),
2,1152,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm
((PetscObject)dm))),0) || MPI_Allreduce((&bound[2]),(xyr)
,(2),(((MPI_Datatype)0x4c00080b)),((MPI_Op)(0x58000001)),(PetscObjectComm
((PetscObject)dm)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1152,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1153

ierr = PetscDrawSetCoordinates(draw, xyl[0], xyl[1], xyr[0], xyr[1]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1153,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1154

ierr = PetscDrawClear(draw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1154,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1155

1156

ierr = MPI_Comm_rank(PetscObjectComm((PetscObject) dm), &rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1156,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1157

for (c = cStart; c < cEnd; ++c) {

1158

PetscScalar *coords = NULL((void*)0);

1159

PetscInt numCoords,coneSize;

1160

1161

ierr = DMPlexGetConeSize(dm, c, &coneSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1161,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1162

ierr = DMPlexVecGetClosure(dm, coordSection, coordinates, c, &numCoords, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1162,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1163

switch (coneSize) {

1164

case 3:

1165

1166

PETSC_DRAW_WHITE0 + rank % (PETSC_DRAW_BASIC_COLORS33-2) + 2,

1167

PETSC_DRAW_WHITE0 + rank % (PETSC_DRAW_BASIC_COLORS33-2) + 2,

1168

PETSC_DRAW_WHITE0 + rank % (PETSC_DRAW_BASIC_COLORS33-2) + 2);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1168,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1169

break;

1170

case 4:

1171

ierr = PetscDrawRectangle(draw, PetscRealPart(coords[0])(coords[0]), PetscRealPart(coords[1])(coords[1]), PetscRealPart(coords[4])(coords[4]), PetscRealPart(coords[5])(coords[5]),

1172

PETSC_DRAW_WHITE0 + rank % (PETSC_DRAW_BASIC_COLORS33-2) + 2,

1173

PETSC_DRAW_WHITE0 + rank % (PETSC_DRAW_BASIC_COLORS33-2) + 2,

1174

PETSC_DRAW_WHITE0 + rank % (PETSC_DRAW_BASIC_COLORS33-2) + 2,

1175

PETSC_DRAW_WHITE0 + rank % (PETSC_DRAW_BASIC_COLORS33-2) + 2);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1175,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1176

break;

1177

default: SETERRQ1(PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot draw cells with %D facets", coneSize)return PetscError(((MPI_Comm)0x44000001),1177,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,56,PETSC_ERROR_INITIAL,"Cannot draw cells with %D facets",coneSize
);

1178

}

1179

ierr = DMPlexVecRestoreClosure(dm, coordSection, coordinates, c, &numCoords, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1179,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1180

}

1181

for (c = cStart; c < cEnd; ++c) {

1182

PetscScalar *coords = NULL((void*)0);

1183

PetscInt numCoords,coneSize;

1184

1185

ierr = DMPlexGetConeSize(dm, c, &coneSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1185,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1186

ierr = DMPlexVecGetClosure(dm, coordSection, coordinates, c, &numCoords, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1186,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1187

switch (coneSize) {

1188

case 3:

1189

ierr = PetscDrawLine(draw, PetscRealPart(coords[0])(coords[0]), PetscRealPart(coords[1])(coords[1]), PetscRealPart(coords[2])(coords[2]), PetscRealPart(coords[3])(coords[3]), PETSC_DRAW_BLACK1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1189,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1190

ierr = PetscDrawLine(draw, PetscRealPart(coords[2])(coords[2]), PetscRealPart(coords[3])(coords[3]), PetscRealPart(coords[4])(coords[4]), PetscRealPart(coords[5])(coords[5]), PETSC_DRAW_BLACK1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1190,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1191

ierr = PetscDrawLine(draw, PetscRealPart(coords[4])(coords[4]), PetscRealPart(coords[5])(coords[5]), PetscRealPart(coords[0])(coords[0]), PetscRealPart(coords[1])(coords[1]), PETSC_DRAW_BLACK1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1191,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1192

break;

1193

case 4:

1194

ierr = PetscDrawLine(draw, PetscRealPart(coords[0])(coords[0]), PetscRealPart(coords[1])(coords[1]), PetscRealPart(coords[2])(coords[2]), PetscRealPart(coords[3])(coords[3]), PETSC_DRAW_BLACK1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1194,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1195

ierr = PetscDrawLine(draw, PetscRealPart(coords[2])(coords[2]), PetscRealPart(coords[3])(coords[3]), PetscRealPart(coords[4])(coords[4]), PetscRealPart(coords[5])(coords[5]), PETSC_DRAW_BLACK1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1195,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1196

ierr = PetscDrawLine(draw, PetscRealPart(coords[4])(coords[4]), PetscRealPart(coords[5])(coords[5]), PetscRealPart(coords[6])(coords[6]), PetscRealPart(coords[7])(coords[7]), PETSC_DRAW_BLACK1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1196,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1197

ierr = PetscDrawLine(draw, PetscRealPart(coords[6])(coords[6]), PetscRealPart(coords[7])(coords[7]), PetscRealPart(coords[0])(coords[0]), PetscRealPart(coords[1])(coords[1]), PETSC_DRAW_BLACK1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1197,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1198

break;

1199

default: SETERRQ1(PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot draw cells with %D facets", coneSize)return PetscError(((MPI_Comm)0x44000001),1199,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,56,PETSC_ERROR_INITIAL,"Cannot draw cells with %D facets",coneSize
);

1200

}

1201

ierr = DMPlexVecRestoreClosure(dm, coordSection, coordinates, c, &numCoords, &coords);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1201,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1202

}

1203

ierr = PetscDrawFlush(draw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1203,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1204

ierr = PetscDrawPause(draw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1204,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1205

ierr = PetscDrawSave(draw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1205,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1206

1207

}

1208

1209

PetscErrorCode DMView_Plex(DM dm, PetscViewer viewer)

1210

{

1211

PetscBool iascii, ishdf5, isvtk, isdraw, flg, isglvis;

1212

char name[PETSC_MAX_PATH_LEN4096];

1213

PetscErrorCode ierr;

1214

1215

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1215; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1216

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1216,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1216,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1216,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1216,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

1217

PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2)do { if (!viewer) return PetscError(((MPI_Comm)0x44000001),1217
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (
!PetscCheckPointer(viewer,PETSC_OBJECT)) return PetscError(((
MPI_Comm)0x44000001),1217,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(viewer))->classid != PETSC_VIEWER_CLASSID
) { if (((PetscObject)(viewer))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),1217,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),1217,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",2); } } while (0);

1218

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERASCII"ascii", &iascii);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1218,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1219

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERVTK"vtk", &isvtk);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1219,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1220

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERHDF5"hdf5", &ishdf5);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1220,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1221

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERDRAW"draw", &isdraw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1221,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1222

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERGLVIS"glvis", &isglvis);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1222,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1223

if (iascii) {

1224

PetscViewerFormat format;

1225

ierr = PetscViewerGetFormat(viewer, &format);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1225,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1226

if (format == PETSC_VIEWER_ASCII_GLVIS) {

1227

ierr = DMPlexView_GLVis(dm, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1227,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1228

} else {

1229

ierr = DMPlexView_Ascii(dm, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1229,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1230

}

1231

} else if (ishdf5) {

1232

#if defined(PETSC_HAVE_HDF5)

1233

ierr = DMPlexView_HDF5_Internal(dm, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1233,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1234

#else

1235

SETERRQ(PetscObjectComm((PetscObject) dm), PETSC_ERR_SUP, "HDF5 not supported in this build.\nPlease reconfigure using --download-hdf5")return PetscError(PetscObjectComm((PetscObject) dm),1235,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",56,PETSC_ERROR_INITIAL
,"HDF5 not supported in this build.\nPlease reconfigure using --download-hdf5"
);

1236

#endif

1237

} else if (isvtk) {

1238

ierr = DMPlexVTKWriteAll((PetscObject) dm,viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1238,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1239

} else if (isdraw) {

1240

ierr = DMPlexView_Draw(dm, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1240,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1241

} else if (isglvis) {

1242

ierr = DMPlexView_GLVis(dm, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1242,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1243

} else {

1244

SETERRQ1(PetscObjectComm((PetscObject) dm), PETSC_ERR_SUP, "Viewer type %s not yet supported for DMPlex writing", ((PetscObject)viewer)->type_name)return PetscError(PetscObjectComm((PetscObject) dm),1244,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",56,PETSC_ERROR_INITIAL
,"Viewer type %s not yet supported for DMPlex writing",((PetscObject
)viewer)->type_name);

1245

}

1246

/* Optionally view the partition */

1247

ierr = PetscOptionsHasName(((PetscObject) dm)->options, ((PetscObject) dm)->prefix, "-dm_partition_view", &flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1247,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1248

if (flg) {

1249

Vec ranks;

1250

ierr = DMPlexCreateRankField(dm, &ranks);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1250,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1251

ierr = VecView(ranks, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1251,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1252

ierr = VecDestroy(&ranks);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1252,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1253

}

1254

/* Optionally view a label */

1255

ierr = PetscOptionsGetString(((PetscObject) dm)->options, ((PetscObject) dm)->prefix, "-dm_label_view", name, PETSC_MAX_PATH_LEN4096, &flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1255,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1256

if (flg) {

1257

DMLabel label;

1258

Vec val;

1259

1260

ierr = DMGetLabel(dm, name, &label);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1260,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1261

if (!label) SETERRQ1(PetscObjectComm((PetscObject) dm), PETSC_ERR_ARG_WRONG, "Label %s provided to -dm_label_view does not exist in this DM", name)return PetscError(PetscObjectComm((PetscObject) dm),1261,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Label %s provided to -dm_label_view does not exist in this DM"
,name);

1262

ierr = DMPlexCreateLabelField(dm, label, &val);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1262,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1263

ierr = VecView(val, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1263,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1264

ierr = VecDestroy(&val);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1264,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1265

}

1266

1267

}

1268

1269

PetscErrorCode DMLoad_Plex(DM dm, PetscViewer viewer)

1270

{

1271

PetscBool ishdf5;

1272

PetscErrorCode ierr;

1273

1274

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1274; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1275

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1275,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1275,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1275,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1275,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

1276

PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2)do { if (!viewer) return PetscError(((MPI_Comm)0x44000001),1276
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (
!PetscCheckPointer(viewer,PETSC_OBJECT)) return PetscError(((
MPI_Comm)0x44000001),1276,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(viewer))->classid != PETSC_VIEWER_CLASSID
) { if (((PetscObject)(viewer))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),1276,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),1276,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",2); } } while (0);

1277

ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERHDF5"hdf5", &ishdf5);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1277,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1278

if (ishdf5) {

1279

#if defined(PETSC_HAVE_HDF5)

1280

PetscViewerFormat format;

1281

ierr = PetscViewerGetFormat(viewer, &format);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1281,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1282

if (format == PETSC_VIEWER_HDF5_XDMF || format == PETSC_VIEWER_HDF5_VIZ) {

1283

ierr = DMPlexLoad_HDF5_Xdmf_Internal(dm, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1283,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1284

} else if (format == PETSC_VIEWER_HDF5_PETSC || format == PETSC_VIEWER_DEFAULT || format == PETSC_VIEWER_NATIVE) {

1285

ierr = DMPlexLoad_HDF5_Internal(dm, viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1285,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1286

} else SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_SUP, "PetscViewerFormat %s not supported for HDF5 input.", PetscViewerFormats[format])return PetscError(PetscObjectComm((PetscObject)dm),1286,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",56,PETSC_ERROR_INITIAL
,"PetscViewerFormat %s not supported for HDF5 input.",PetscViewerFormats
[format]);

1287

#else

1288

SETERRQ(PetscObjectComm((PetscObject) dm), PETSC_ERR_SUP, "HDF5 not supported in this build.\nPlease reconfigure using --download-hdf5")return PetscError(PetscObjectComm((PetscObject) dm),1288,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",56,PETSC_ERROR_INITIAL
,"HDF5 not supported in this build.\nPlease reconfigure using --download-hdf5"
);

1289

#endif

1290

} else {

1291

SETERRQ1(PetscObjectComm((PetscObject) dm), PETSC_ERR_SUP, "Viewer type %s not yet supported for DMPlex loading", ((PetscObject)viewer)->type_name)return PetscError(PetscObjectComm((PetscObject) dm),1291,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",56,PETSC_ERROR_INITIAL
,"Viewer type %s not yet supported for DMPlex loading",((PetscObject
)viewer)->type_name);

1292

}

1293

1294

}

1295

1296

PetscErrorCode DMDestroy_Plex(DM dm)

1297

{

1298

DM_Plex *mesh = (DM_Plex*) dm->data;

1299

PetscErrorCode ierr;

1300

1301

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1301; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1302

ierr = PetscObjectComposeFunction((PetscObject)dm,"DMSetUpGLVisViewer_C",NULL)PetscObjectComposeFunction_Private((PetscObject)dm,"DMSetUpGLVisViewer_C"
,(PetscVoidFunction)(((void*)0)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1302,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1303

ierr = PetscObjectComposeFunction((PetscObject)dm,"DMPlexInsertBoundaryValues_C", NULL)PetscObjectComposeFunction_Private((PetscObject)dm,"DMPlexInsertBoundaryValues_C"
,(PetscVoidFunction)(((void*)0)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1303,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1304

if (--mesh->refct > 0) PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);

1305

ierr = PetscSectionDestroy(&mesh->coneSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1305,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1306

ierr = PetscFree(mesh->cones)((*PetscTrFree)((void*)(mesh->cones),1306,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((mesh->cones) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1306,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1307

ierr = PetscFree(mesh->coneOrientations)((*PetscTrFree)((void*)(mesh->coneOrientations),1307,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c") || (
(mesh->coneOrientations) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1307,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1308

ierr = PetscSectionDestroy(&mesh->supportSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1308,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1309

ierr = PetscSectionDestroy(&mesh->subdomainSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1309,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1310

ierr = PetscFree(mesh->supports)((*PetscTrFree)((void*)(mesh->supports),1310,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((mesh->supports) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1310,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1311

ierr = PetscFree(mesh->facesTmp)((*PetscTrFree)((void*)(mesh->facesTmp),1311,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((mesh->facesTmp) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1311,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1312

ierr = PetscFree(mesh->tetgenOpts)((*PetscTrFree)((void*)(mesh->tetgenOpts),1312,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((mesh->tetgenOpts) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1312,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1313

ierr = PetscFree(mesh->triangleOpts)((*PetscTrFree)((void*)(mesh->triangleOpts),1313,__func__,
"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c") || ((
mesh->triangleOpts) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1313,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1314

ierr = PetscPartitionerDestroy(&mesh->partitioner);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1314,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1315

ierr = DMLabelDestroy(&mesh->subpointMap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1315,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1316

ierr = ISDestroy(&mesh->globalVertexNumbers);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1316,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1317

ierr = ISDestroy(&mesh->globalCellNumbers);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1317,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1318

ierr = PetscSectionDestroy(&mesh->anchorSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1318,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1319

ierr = ISDestroy(&mesh->anchorIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1319,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1320

ierr = PetscSectionDestroy(&mesh->parentSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1320,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1321

ierr = PetscFree(mesh->parents)((*PetscTrFree)((void*)(mesh->parents),1321,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((mesh->parents) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1321,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1322

ierr = PetscFree(mesh->childIDs)((*PetscTrFree)((void*)(mesh->childIDs),1322,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((mesh->childIDs) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1322,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1323

ierr = PetscSectionDestroy(&mesh->childSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1323,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1324

ierr = PetscFree(mesh->children)((*PetscTrFree)((void*)(mesh->children),1324,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((mesh->children) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1324,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1325

ierr = DMDestroy(&mesh->referenceTree);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1325,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1326

ierr = PetscGridHashDestroy(&mesh->lbox);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1326,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1327

/* This was originally freed in DMDestroy(), but that prevents reference counting of backend objects */

1328

ierr = PetscFree(mesh)((*PetscTrFree)((void*)(mesh),1328,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((mesh) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1328,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1329

1330

}

1331

1332

PetscErrorCode DMCreateMatrix_Plex(DM dm, Mat *J)

1333

{

1334

PetscSection sectionGlobal;

1335

PetscInt bs = -1, mbs;

1336

PetscInt localSize;

1337

PetscBool isShell, isBlock, isSeqBlock, isMPIBlock, isSymBlock, isSymSeqBlock, isSymMPIBlock, isMatIS;

1338

PetscErrorCode ierr;

1339

MatType mtype;

1340

ISLocalToGlobalMapping ltog;

1341

1342

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1342; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1343

ierr = MatInitializePackage();CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1343,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1344

mtype = dm->mattype;

1345

ierr = DMGetGlobalSection(dm, &sectionGlobal);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1345,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1346

/* ierr = PetscSectionGetStorageSize(sectionGlobal, &localSize);CHKERRQ(ierr); */

1347

ierr = PetscSectionGetConstrainedStorageSize(sectionGlobal, &localSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1347,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1348

ierr = MatCreate(PetscObjectComm((PetscObject)dm), J);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1348,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1349

ierr = MatSetSizes(*J, localSize, localSize, PETSC_DETERMINE-1, PETSC_DETERMINE-1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1349,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1350

ierr = MatSetType(*J, mtype);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1350,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1351

ierr = MatSetFromOptions(*J);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1351,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1352

ierr = MatGetBlockSize(*J, &mbs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1352,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1353

if (mbs > 1) bs = mbs;

1354

ierr = PetscStrcmp(mtype, MATSHELL"shell", &isShell);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1354,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1355

ierr = PetscStrcmp(mtype, MATBAIJ"baij", &isBlock);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1355,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1356

ierr = PetscStrcmp(mtype, MATSEQBAIJ"seqbaij", &isSeqBlock);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1356,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1357

ierr = PetscStrcmp(mtype, MATMPIBAIJ"mpibaij", &isMPIBlock);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1357,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1358

ierr = PetscStrcmp(mtype, MATSBAIJ"sbaij", &isSymBlock);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1358,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1359

ierr = PetscStrcmp(mtype, MATSEQSBAIJ"seqsbaij", &isSymSeqBlock);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1359,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1360

ierr = PetscStrcmp(mtype, MATMPISBAIJ"mpisbaij", &isSymMPIBlock);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1360,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1361

ierr = PetscStrcmp(mtype, MATIS"is", &isMatIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1361,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1362

if (!isShell) {

1363

PetscSection subSection;

1364

PetscBool fillMatrix = (PetscBool)(!dm->prealloc_only && !isMatIS);

1365

PetscInt *dnz, *onz, *dnzu, *onzu, bsLocal[2], bsMinMax[2], *ltogidx, lsize;

1366

PetscInt pStart, pEnd, p, dof, cdof;

1367

1368

/* Set localtoglobalmapping on the matrix for MatSetValuesLocal() to work (it also creates the local matrices in case of MATIS) */

1369

if (isMatIS) { /* need a different l2g map than the one computed by DMGetLocalToGlobalMapping */

1370

PetscSection section;

1371

PetscInt size;

1372

1373

ierr = DMGetSection(dm, &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1373,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1374

ierr = PetscSectionGetStorageSize(section, &size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1374,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1375

ierr = PetscMalloc1(size,&ltogidx)PetscMallocA(1,PETSC_FALSE,1375,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(size)*sizeof(**(&ltogidx)),(&ltogidx));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1375,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1376

ierr = DMPlexGetSubdomainSection(dm, &subSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1376,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1377

} else {

1378

ierr = DMGetLocalToGlobalMapping(dm,&ltog);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1378,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1379

}

1380

ierr = PetscSectionGetChart(sectionGlobal, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1380,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1381

for (p = pStart, lsize = 0; p < pEnd; ++p) {

1382

PetscInt bdof;

1383

1384

ierr = PetscSectionGetDof(sectionGlobal, p, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1384,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1385

ierr = PetscSectionGetConstraintDof(sectionGlobal, p, &cdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1385,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1386

dof = dof < 0 ? -(dof+1) : dof;

1387

bdof = cdof && (dof-cdof) ? 1 : dof;

1388

if (dof) {

1389

if (bs < 0) {bs = bdof;}

1390

else if (bs != bdof) {bs = 1; if (!isMatIS) break;}

1391

}

1392

if (isMatIS) {

1393

PetscInt loff,c,off;

1394

ierr = PetscSectionGetOffset(subSection, p, &loff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1394,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1395

ierr = PetscSectionGetOffset(sectionGlobal, p, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1395,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1396

for (c = 0; c < dof-cdof; ++c, ++lsize) ltogidx[loff+c] = off > -1 ? off+c : -(off+1)+c;

1397

}

1398

}

1399

/* Must have same blocksize on all procs (some might have no points) */

1400

bsLocal[0] = bs < 0 ? PETSC_MAX_INT2147483647 : bs; bsLocal[1] = bs;

1401

ierr = PetscGlobalMinMaxInt(PetscObjectComm((PetscObject) dm), bsLocal, bsMinMax);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1401,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1402

if (bsMinMax[0] != bsMinMax[1]) {bs = 1;}

1403

else {bs = bsMinMax[0];}

1404

bs = bs < 0 ? 1 : bs;

1405

if (isMatIS) {

1406

PetscInt l;

1407

/* Must reduce indices by blocksize */

1408

if (bs > 1) for (l = 0; l < lsize; ++l) ltogidx[l] /= bs;

1409

ierr = ISLocalToGlobalMappingCreate(PetscObjectComm((PetscObject)dm), bs, lsize, ltogidx, PETSC_OWN_POINTER, &ltog);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1409,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1410

}

1411

ierr = MatSetLocalToGlobalMapping(*J,ltog,ltog);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1411,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1412

if (isMatIS) {

1413

ierr = ISLocalToGlobalMappingDestroy(&ltog);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1413,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1414

}

1415

ierr = PetscCalloc4(localSize/bs, &dnz, localSize/bs, &onz, localSize/bs, &dnzu, localSize/bs, &onzu)PetscMallocA(4,PETSC_TRUE,1415,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(localSize/bs)*sizeof(**(&dnz)),(&dnz),(size_t
)(localSize/bs)*sizeof(**(&onz)),(&onz),(size_t)(localSize
/bs)*sizeof(**(&dnzu)),(&dnzu),(size_t)(localSize/bs)
*sizeof(**(&onzu)),(&onzu));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1415,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1416

ierr = DMPlexPreallocateOperator(dm, bs, dnz, onz, dnzu, onzu, *J, fillMatrix);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1416,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1417

ierr = PetscFree4(dnz, onz, dnzu, onzu)PetscFreeA(4,1417,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,&(dnz),&(onz),&(dnzu),&(onzu));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1417,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1418

}

1419

ierr = MatSetDM(*J, dm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1419,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1420

1421

}

1422

1423

/*@

1424

DMPlexGetSubdomainSection - Returns the section associated with the subdomain

1425

1426

Not collective

1427

1428

Input Parameter:

1429

. mesh - The DMPlex

1430

1431

Output Parameters:

1432

. subsection - The subdomain section

1433

1434

Level: developer

1435

1436

.seealso:

1437

@*/

1438

PetscErrorCode DMPlexGetSubdomainSection(DM dm, PetscSection *subsection)

1439

{

1440

DM_Plex *mesh = (DM_Plex*) dm->data;

1441

PetscErrorCode ierr;

1442

1443

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1443; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1444

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1444,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1444,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1444,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1444,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

1445

if (!mesh->subdomainSection) {

1446

PetscSection section;

1447

PetscSF sf;

1448

1449

ierr = PetscSFCreate(PETSC_COMM_SELF((MPI_Comm)0x44000001),&sf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1449,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1450

ierr = DMGetSection(dm,&section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1450,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1451

ierr = PetscSectionCreateGlobalSection(section,sf,PETSC_FALSE,PETSC_TRUE,&mesh->subdomainSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1451,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1452

ierr = PetscSFDestroy(&sf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1452,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1453

}

1454

*subsection = mesh->subdomainSection;

1455

1456

}

1457

1458

/*@

1459

DMPlexGetChart - Return the interval for all mesh points [pStart, pEnd)

1460

1461

Not collective

1462

1463

Input Parameter:

1464

. mesh - The DMPlex

1465

1466

Output Parameters:

1467

+ pStart - The first mesh point

1468

- pEnd - The upper bound for mesh points

1469

1470

Level: beginner

1471

1472

.seealso: DMPlexCreate(), DMPlexSetChart()

1473

@*/

1474

PetscErrorCode DMPlexGetChart(DM dm, PetscInt *pStart, PetscInt *pEnd)

1475

{

1476

DM_Plex *mesh = (DM_Plex*) dm->data;

1477

PetscErrorCode ierr;

1478

1479

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1479; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1480

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1480,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1480,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1480,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1480,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

1481

ierr = PetscSectionGetChart(mesh->coneSection, pStart, pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1481,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1482

1483

}

1484

1485

/*@

1486

DMPlexSetChart - Set the interval for all mesh points [pStart, pEnd)

1487

1488

Not collective

1489

1490

Input Parameters:

1491

+ mesh - The DMPlex

1492

. pStart - The first mesh point

1493

- pEnd - The upper bound for mesh points

1494

1495

Output Parameters:

1496

1497

Level: beginner

1498

1499

.seealso: DMPlexCreate(), DMPlexGetChart()

1500

@*/

1501

PetscErrorCode DMPlexSetChart(DM dm, PetscInt pStart, PetscInt pEnd)

1502

{

1503

DM_Plex *mesh = (DM_Plex*) dm->data;

1504

PetscErrorCode ierr;

1505

1506

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1506; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1507

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1507,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1507,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1507,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1507,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

1508

ierr = PetscSectionSetChart(mesh->coneSection, pStart, pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1508,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1509

ierr = PetscSectionSetChart(mesh->supportSection, pStart, pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1509,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1510

1511

}

1512

1513

/*@

1514

DMPlexGetConeSize - Return the number of in-edges for this point in the DAG

1515

1516

Not collective

1517

1518

Input Parameters:

1519

+ mesh - The DMPlex

1520

- p - The point, which must lie in the chart set with DMPlexSetChart()

1521

1522

Output Parameter:

1523

. size - The cone size for point p

1524

1525

Level: beginner

1526

1527

.seealso: DMPlexCreate(), DMPlexSetConeSize(), DMPlexSetChart()

1528

@*/

1529

PetscErrorCode DMPlexGetConeSize(DM dm, PetscInt p, PetscInt *size)

1530

{

1531

DM_Plex *mesh = (DM_Plex*) dm->data;

1532

PetscErrorCode ierr;

1533

1534

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1534; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1535

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1535,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1535,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1535,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1535,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

1536

PetscValidPointer(size, 3)do { if (!size) return PetscError(((MPI_Comm)0x44000001),1536
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(size,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),1536,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",3);
} while (0);

1537

ierr = PetscSectionGetDof(mesh->coneSection, p, size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1537,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1538

1539

}

1540

1541

/*@

1542

DMPlexSetConeSize - Set the number of in-edges for this point in the DAG

1543

1544

Not collective

1545

1546

Input Parameters:

1547

+ mesh - The DMPlex

1548

. p - The point, which must lie in the chart set with DMPlexSetChart()

1549

- size - The cone size for point p

1550

1551

Output Parameter:

1552

1553

Note:

1554

This should be called after DMPlexSetChart().

1555

1556

Level: beginner

1557

1558

.seealso: DMPlexCreate(), DMPlexGetConeSize(), DMPlexSetChart()

1559

@*/

1560

PetscErrorCode DMPlexSetConeSize(DM dm, PetscInt p, PetscInt size)

1561

{

1562

DM_Plex *mesh = (DM_Plex*) dm->data;

1563

PetscErrorCode ierr;

1564

1565

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1565; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1566

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1566,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1566,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1566,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1566,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

1567

ierr = PetscSectionSetDof(mesh->coneSection, p, size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1567,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1568

1569

mesh->maxConeSize = PetscMax(mesh->maxConeSize, size)(((mesh->maxConeSize)<(size)) ? (size) : (mesh->maxConeSize
));

1570

1571

}

1572

1573

/*@

1574

DMPlexAddConeSize - Add the given number of in-edges to this point in the DAG

1575

1576

Not collective

1577

1578

Input Parameters:

1579

+ mesh - The DMPlex

1580

. p - The point, which must lie in the chart set with DMPlexSetChart()

1581

- size - The additional cone size for point p

1582

1583

Output Parameter:

1584

1585

Note:

1586

This should be called after DMPlexSetChart().

1587

1588

Level: beginner

1589

1590

.seealso: DMPlexCreate(), DMPlexSetConeSize(), DMPlexGetConeSize(), DMPlexSetChart()

1591

@*/

1592

PetscErrorCode DMPlexAddConeSize(DM dm, PetscInt p, PetscInt size)

1593

{

1594

DM_Plex *mesh = (DM_Plex*) dm->data;

1595

PetscInt csize;

1596

PetscErrorCode ierr;

1597

1598

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1598; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1599

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1599,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1599,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1599,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1599,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

1600

ierr = PetscSectionAddDof(mesh->coneSection, p, size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1600,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1601

ierr = PetscSectionGetDof(mesh->coneSection, p, &csize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1601,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1602

1603

mesh->maxConeSize = PetscMax(mesh->maxConeSize, csize)(((mesh->maxConeSize)<(csize)) ? (csize) : (mesh->maxConeSize
));

1604

1605

}

1606

1607

/*@C

1608

DMPlexGetCone - Return the points on the in-edges for this point in the DAG

1609

1610

Not collective

1611

1612

Input Parameters:

1613

+ dm - The DMPlex

1614

- p - The point, which must lie in the chart set with DMPlexSetChart()

1615

1616

Output Parameter:

1617

. cone - An array of points which are on the in-edges for point p

1618

1619

Level: beginner

1620

1621

Fortran Notes:

1622

Since it returns an array, this routine is only available in Fortran 90, and you must

1623

include petsc.h90 in your code.

1624

You must also call DMPlexRestoreCone() after you finish using the returned array.

1625

DMPlexRestoreCone() is not needed/available in C.

1626

1627

.seealso: DMPlexCreate(), DMPlexSetCone(), DMPlexGetConeTuple(), DMPlexSetChart()

1628

@*/

1629

PetscErrorCode DMPlexGetCone(DM dm, PetscInt p, const PetscInt *cone[])

1630

{

1631

DM_Plex *mesh = (DM_Plex*) dm->data;

1632

PetscInt off;

1633

PetscErrorCode ierr;

1634

1635

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1635; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1636

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1636,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1636,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1636,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1636,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

1637

PetscValidPointer(cone, 3)do { if (!cone) return PetscError(((MPI_Comm)0x44000001),1637
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(cone,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),1637,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",3);
} while (0);

1638

ierr = PetscSectionGetOffset(mesh->coneSection, p, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1638,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1639

*cone = &mesh->cones[off];

1640

1641

}

1642

1643

/*@C

1644

DMPlexGetConeTuple - Return the points on the in-edges of several points in the DAG

1645

1646

Not collective

1647

1648

Input Parameters:

1649

+ dm - The DMPlex

1650

- p - The IS of points, which must lie in the chart set with DMPlexSetChart()

1651

1652

Output Parameter:

1653

+ pConesSection - PetscSection describing the layout of pCones

1654

- pCones - An array of points which are on the in-edges for the point set p

1655

1656

Level: intermediate

1657

1658

.seealso: DMPlexCreate(), DMPlexGetCone(), DMPlexGetConeRecursive(), DMPlexSetChart()

1659

@*/

1660

PetscErrorCode DMPlexGetConeTuple(DM dm, IS p, PetscSection *pConesSection, IS *pCones)

1661

{

1662

PetscSection cs, newcs;

1663

PetscInt *cones;

1664

PetscInt *newarr=NULL((void*)0);

1665

PetscInt n;

1666

PetscErrorCode ierr;

1667

1668

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1668; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1669

ierr = DMPlexGetCones(dm, &cones);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1669,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1670

ierr = DMPlexGetConeSection(dm, &cs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1670,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1671

ierr = PetscSectionExtractDofsFromArray(cs, MPIU_INT((MPI_Datatype)0x4c000405), cones, p, &newcs, pCones ? ((void**)&newarr) : NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1671,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1672

if (pConesSection) *pConesSection = newcs;

1673

if (pCones) {

1674

ierr = PetscSectionGetStorageSize(newcs, &n);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1674,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1675

ierr = ISCreateGeneral(PetscObjectComm((PetscObject)p), n, newarr, PETSC_OWN_POINTER, pCones);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1675,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1676

}

1677

1678

}

1679

1680

static PetscErrorCode DMPlexGetConeRecursive_Private(DM dm, PetscInt *n_inout, const PetscInt points[], PetscInt *offset_inout, PetscInt buf[])

1681

{

1682

PetscInt p, n, cn, i;

1683

const PetscInt *cone;

1684

PetscErrorCode ierr;

1685

1686

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1686; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1687

n = *n_inout;

1688

*n_inout = 0;

1689

for (i=0; i<n; i++) {

1690

p = points[i];

1691

ierr = DMPlexGetConeSize(dm, p, &cn);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1691,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1692

if (!cn) {

1693

cn = 1;

1694

if (buf) {

1695

buf[*offset_inout] = p;

1696

++(*offset_inout);

1697

}

1698

} else {

1699

ierr = DMPlexGetCone(dm, p, &cone);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1699,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1700

ierr = DMPlexGetConeRecursive_Private(dm, &cn, cone, offset_inout, buf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1700,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1701

}

1702

*n_inout += cn;

1703

}

1704

1705

}

1706

1707

/*@C

1708

DMPlexGetConeRecursive - Like DMPlexGetConeTuple() but recursive, i.e. each cone point is expanded into a set of its own cone points until a vertex (DAG point with no cone) is reached.

1709

1710

Not collective

1711

1712

Input Parameters:

1713

+ dm - The DMPlex

1714

- p - The IS of points, which must lie in the chart set with DMPlexSetChart()

1715

1716

Output Parameter:

1717

. pCones - An array of recursively expanded cones, i.e. containing only vertices, and each of them can be present multiple times

1718

1719

Level: advanced

1720

1721

.seealso: DMPlexCreate(), DMPlexGetCone(), DMPlexGetConeTuple()

1722

@*/

1723

PetscErrorCode DMPlexGetConeRecursive(DM dm, IS p, IS *pCones)

1724

{

1725

const PetscInt *arr=NULL((void*)0);

1726

PetscInt *cpoints=NULL((void*)0);

1727

PetscInt n, cn;

1728

PetscInt zero;

1729

PetscErrorCode ierr;

1730

1731

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1731; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1732

ierr = ISGetLocalSize(p, &n);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1732,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1733

ierr = ISGetIndices(p, &arr);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1733,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1734

zero = 0;

1735

/* first figure out the total number of returned points */

1736

cn = n;

1737

ierr = DMPlexGetConeRecursive_Private(dm, &cn, arr, &zero, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1737,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1738

ierr = PetscMalloc1(cn, &cpoints)PetscMallocA(1,PETSC_FALSE,1738,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(cn)*sizeof(**(&cpoints)),(&cpoints));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1738,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1739

/* now get recursive cones themselves */

1740

ierr = DMPlexGetConeRecursive_Private(dm, &n, arr, &zero, cpoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1740,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1741

ierr = ISCreateGeneral(PetscObjectComm((PetscObject)p), n, cpoints, PETSC_OWN_POINTER, pCones);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1741,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1742

ierr = ISRestoreIndices(p, &arr);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1742,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1743

1744

}

1745

1746

/*@

1747

DMPlexSetCone - Set the points on the in-edges for this point in the DAG; that is these are the points that cover the specific point

1748

1749

Not collective

1750

1751

Input Parameters:

1752

+ mesh - The DMPlex

1753

. p - The point, which must lie in the chart set with DMPlexSetChart()

1754

- cone - An array of points which are on the in-edges for point p

1755

1756

Output Parameter:

1757

1758

Note:

1759

This should be called after all calls to DMPlexSetConeSize() and DMSetUp().

1760

1761

Developer Note: Why not call this DMPlexSetCover()

1762

1763

Level: beginner

1764

1765

.seealso: DMPlexCreate(), DMPlexGetCone(), DMPlexSetChart(), DMPlexSetConeSize(), DMSetUp(), DMPlexSetSupport(), DMPlexSetSupportSize()

1766

@*/

1767

PetscErrorCode DMPlexSetCone(DM dm, PetscInt p, const PetscInt cone[])

1768

{

1769

DM_Plex *mesh = (DM_Plex*) dm->data;

1770

PetscInt pStart, pEnd;

1771

PetscInt dof, off, c;

1772

PetscErrorCode ierr;

1773

1774

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1774; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1775

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1775,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1775,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1775,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1775,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

1776

ierr = PetscSectionGetChart(mesh->coneSection, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1776,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1777

ierr = PetscSectionGetDof(mesh->coneSection, p, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1777,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1778

if (dof) PetscValidPointer(cone, 3)do { if (!cone) return PetscError(((MPI_Comm)0x44000001),1778
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(cone,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),1778,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",3);
} while (0);

1779

ierr = PetscSectionGetOffset(mesh->coneSection, p, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1779,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1780

if ((p < pStart) || (p >= pEnd)) SETERRQ3(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Mesh point %D is not in the valid range [%D, %D)", p, pStart, pEnd)return PetscError(PetscObjectComm((PetscObject)dm),1780,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Mesh point %D is not in the valid range [%D, %D)",p,pStart,
pEnd);

1781

for (c = 0; c < dof; ++c) {

1782

if ((cone[c] < pStart) || (cone[c] >= pEnd)) SETERRQ3(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Cone point %D is not in the valid range [%D, %D)", cone[c], pStart, pEnd)return PetscError(PetscObjectComm((PetscObject)dm),1782,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Cone point %D is not in the valid range [%D, %D)",cone[c],pStart
,pEnd);

1783

mesh->cones[off+c] = cone[c];

1784

}

1785

1786

}

1787

1788

/*@C

1789

DMPlexGetConeOrientation - Return the orientations on the in-edges for this point in the DAG

1790

1791

Not collective

1792

1793

Input Parameters:

1794

+ mesh - The DMPlex

1795

- p - The point, which must lie in the chart set with DMPlexSetChart()

1796

1797

Output Parameter:

1798

. coneOrientation - An array of orientations which are on the in-edges for point p. An orientation is an

1799

integer giving the prescription for cone traversal. If it is negative, the cone is

1800

traversed in the opposite direction. Its value 'o', or if negative '-(o+1)', gives

1801

the index of the cone point on which to start.

1802

1803

Level: beginner

1804

1805

Fortran Notes:

1806

Since it returns an array, this routine is only available in Fortran 90, and you must

1807

include petsc.h90 in your code.

1808

You must also call DMPlexRestoreConeOrientation() after you finish using the returned array.

1809

DMPlexRestoreConeOrientation() is not needed/available in C.

1810

1811

.seealso: DMPlexCreate(), DMPlexGetCone(), DMPlexSetCone(), DMPlexSetChart()

1812

@*/

1813

PetscErrorCode DMPlexGetConeOrientation(DM dm, PetscInt p, const PetscInt *coneOrientation[])

1814

{

1815

DM_Plex *mesh = (DM_Plex*) dm->data;

1816

PetscInt off;

1817

PetscErrorCode ierr;

1818

1819

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1819; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1820

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1820,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1820,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1820,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1820,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

1821

#if defined(PETSC_USE_DEBUG1)

1822

{

1823

PetscInt dof;

1824

ierr = PetscSectionGetDof(mesh->coneSection, p, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1824,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1825

if (dof) PetscValidPointer(coneOrientation, 3)do { if (!coneOrientation) return PetscError(((MPI_Comm)0x44000001
),1825,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(coneOrientation,PETSC_CHAR)) return PetscError
(((MPI_Comm)0x44000001),1825,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",3);
} while (0);

1826

}

1827

#endif

1828

ierr = PetscSectionGetOffset(mesh->coneSection, p, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1828,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1829

1830

*coneOrientation = &mesh->coneOrientations[off];

1831

1832

}

1833

1834

/*@

1835

DMPlexSetConeOrientation - Set the orientations on the in-edges for this point in the DAG

1836

1837

Not collective

1838

1839

Input Parameters:

1840

+ mesh - The DMPlex

1841

. p - The point, which must lie in the chart set with DMPlexSetChart()

1842

- coneOrientation - An array of orientations which are on the in-edges for point p. An orientation is an

1843

integer giving the prescription for cone traversal. If it is negative, the cone is

1844

traversed in the opposite direction. Its value 'o', or if negative '-(o+1)', gives

1845

the index of the cone point on which to start.

1846

1847

Output Parameter:

1848

1849

Note:

1850

This should be called after all calls to DMPlexSetConeSize() and DMSetUp().

1851

1852

Level: beginner

1853

1854

.seealso: DMPlexCreate(), DMPlexGetConeOrientation(), DMPlexSetCone(), DMPlexSetChart(), DMPlexSetConeSize(), DMSetUp()

1855

@*/

1856

PetscErrorCode DMPlexSetConeOrientation(DM dm, PetscInt p, const PetscInt coneOrientation[])

1857

{

1858

DM_Plex *mesh = (DM_Plex*) dm->data;

1859

PetscInt pStart, pEnd;

1860

PetscInt dof, off, c;

1861

PetscErrorCode ierr;

1862

1863

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1863; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1864

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1864,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1864,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1864,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1864,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

1865

ierr = PetscSectionGetChart(mesh->coneSection, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1865,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1866

ierr = PetscSectionGetDof(mesh->coneSection, p, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1866,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1867

if (dof) PetscValidPointer(coneOrientation, 3)do { if (!coneOrientation) return PetscError(((MPI_Comm)0x44000001
),1867,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(coneOrientation,PETSC_CHAR)) return PetscError
(((MPI_Comm)0x44000001),1867,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",3);
} while (0);

1868

ierr = PetscSectionGetOffset(mesh->coneSection, p, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1868,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1869

if ((p < pStart) || (p >= pEnd)) SETERRQ3(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Mesh point %D is not in the valid range [%D, %D)", p, pStart, pEnd)return PetscError(PetscObjectComm((PetscObject)dm),1869,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Mesh point %D is not in the valid range [%D, %D)",p,pStart,
pEnd);

1870

for (c = 0; c < dof; ++c) {

1871

PetscInt cdof, o = coneOrientation[c];

1872

1873

ierr = PetscSectionGetDof(mesh->coneSection, mesh->cones[off+c], &cdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1873,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1874

if (o && ((o < -(cdof+1)) || (o >= cdof))) SETERRQ3(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Cone orientation %D is not in the valid range [%D. %D)", o, -(cdof+1), cdof)return PetscError(PetscObjectComm((PetscObject)dm),1874,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Cone orientation %D is not in the valid range [%D. %D)",o,-
(cdof+1),cdof);

1875

mesh->coneOrientations[off+c] = o;

1876

}

1877

1878

}

1879

1880

/*@

1881

DMPlexInsertCone - Insert a point into the in-edges for the point p in the DAG

1882

1883

Not collective

1884

1885

Input Parameters:

1886

+ mesh - The DMPlex

1887

. p - The point, which must lie in the chart set with DMPlexSetChart()

1888

. conePos - The local index in the cone where the point should be put

1889

- conePoint - The mesh point to insert

1890

1891

Level: beginner

1892

1893

.seealso: DMPlexCreate(), DMPlexGetCone(), DMPlexSetChart(), DMPlexSetConeSize(), DMSetUp()

1894

@*/

1895

PetscErrorCode DMPlexInsertCone(DM dm, PetscInt p, PetscInt conePos, PetscInt conePoint)

1896

{

1897

DM_Plex *mesh = (DM_Plex*) dm->data;

1898

PetscInt pStart, pEnd;

1899

PetscInt dof, off;

1900

PetscErrorCode ierr;

1901

1902

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1902; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1903

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1903,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1903,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1903,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1903,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

1904

ierr = PetscSectionGetChart(mesh->coneSection, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1904,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1905

if ((p < pStart) || (p >= pEnd)) SETERRQ3(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Mesh point %D is not in the valid range [%D, %D)", p, pStart, pEnd)return PetscError(PetscObjectComm((PetscObject)dm),1905,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Mesh point %D is not in the valid range [%D, %D)",p,pStart,
pEnd);

1906

if ((conePoint < pStart) || (conePoint >= pEnd)) SETERRQ3(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Cone point %D is not in the valid range [%D, %D)", conePoint, pStart, pEnd)return PetscError(PetscObjectComm((PetscObject)dm),1906,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Cone point %D is not in the valid range [%D, %D)",conePoint
,pStart,pEnd);

1907

ierr = PetscSectionGetDof(mesh->coneSection, p, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1907,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1908

ierr = PetscSectionGetOffset(mesh->coneSection, p, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1908,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1909

if ((conePos < 0) || (conePos >= dof)) SETERRQ3(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Cone position %D of point %D is not in the valid range [0, %D)", conePos, p, dof)return PetscError(PetscObjectComm((PetscObject)dm),1909,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Cone position %D of point %D is not in the valid range [0, %D)"
,conePos,p,dof);

1910

mesh->cones[off+conePos] = conePoint;

1911

1912

}

1913

1914

/*@

1915

DMPlexInsertConeOrientation - Insert a point orientation for the in-edge for the point p in the DAG

1916

1917

Not collective

1918

1919

Input Parameters:

1920

+ mesh - The DMPlex

1921

. p - The point, which must lie in the chart set with DMPlexSetChart()

1922

. conePos - The local index in the cone where the point should be put

1923

- coneOrientation - The point orientation to insert

1924

1925

Level: beginner

1926

1927

.seealso: DMPlexCreate(), DMPlexGetCone(), DMPlexSetChart(), DMPlexSetConeSize(), DMSetUp()

1928

@*/

1929

PetscErrorCode DMPlexInsertConeOrientation(DM dm, PetscInt p, PetscInt conePos, PetscInt coneOrientation)

1930

{

1931

DM_Plex *mesh = (DM_Plex*) dm->data;

1932

PetscInt pStart, pEnd;

1933

PetscInt dof, off;

1934

PetscErrorCode ierr;

1935

1936

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1936; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1937

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1937,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1937,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1937,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1937,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

1938

ierr = PetscSectionGetChart(mesh->coneSection, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1938,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1939

if ((p < pStart) || (p >= pEnd)) SETERRQ3(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Mesh point %D is not in the valid range [%D, %D)", p, pStart, pEnd)return PetscError(PetscObjectComm((PetscObject)dm),1939,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Mesh point %D is not in the valid range [%D, %D)",p,pStart,
pEnd);

1940

ierr = PetscSectionGetDof(mesh->coneSection, p, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1940,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1941

ierr = PetscSectionGetOffset(mesh->coneSection, p, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1941,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1942

if ((conePos < 0) || (conePos >= dof)) SETERRQ3(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Cone position %D of point %D is not in the valid range [0, %D)", conePos, p, dof)return PetscError(PetscObjectComm((PetscObject)dm),1942,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Cone position %D of point %D is not in the valid range [0, %D)"
,conePos,p,dof);

1943

mesh->coneOrientations[off+conePos] = coneOrientation;

1944

1945

}

1946

1947

/*@

1948

DMPlexGetSupportSize - Return the number of out-edges for this point in the DAG

1949

1950

Not collective

1951

1952

Input Parameters:

1953

+ mesh - The DMPlex

1954

- p - The point, which must lie in the chart set with DMPlexSetChart()

1955

1956

Output Parameter:

1957

. size - The support size for point p

1958

1959

Level: beginner

1960

1961

.seealso: DMPlexCreate(), DMPlexSetConeSize(), DMPlexSetChart(), DMPlexGetConeSize()

1962

@*/

1963

PetscErrorCode DMPlexGetSupportSize(DM dm, PetscInt p, PetscInt *size)

1964

{

1965

DM_Plex *mesh = (DM_Plex*) dm->data;

1966

PetscErrorCode ierr;

1967

1968

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1968; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

1969

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),1969,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),1969,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),1969,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),1969,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

1970

PetscValidPointer(size, 3)do { if (!size) return PetscError(((MPI_Comm)0x44000001),1970
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(size,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),1970,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",3);
} while (0);

1971

ierr = PetscSectionGetDof(mesh->supportSection, p, size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),1971,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

1972

1973

}

1974

1975

/*@

1976

DMPlexSetSupportSize - Set the number of out-edges for this point in the DAG

1977

1978

Not collective

1979

1980

Input Parameters:

1981

+ mesh - The DMPlex

1982

. p - The point, which must lie in the chart set with DMPlexSetChart()

1983

- size - The support size for point p

1984

1985

Output Parameter:

1986

1987

Note:

1988

This should be called after DMPlexSetChart().

1989

1990

Level: beginner

1991

1992

.seealso: DMPlexCreate(), DMPlexGetSupportSize(), DMPlexSetChart()

1993

@*/

1994

PetscErrorCode DMPlexSetSupportSize(DM dm, PetscInt p, PetscInt size)

1995

{

1996

DM_Plex *mesh = (DM_Plex*) dm->data;

1997

PetscErrorCode ierr;

1998

1999

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 1999; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2000

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2000,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2000,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2000,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2000,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

2001

ierr = PetscSectionSetDof(mesh->supportSection, p, size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2001,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2002

2003

mesh->maxSupportSize = PetscMax(mesh->maxSupportSize, size)(((mesh->maxSupportSize)<(size)) ? (size) : (mesh->maxSupportSize
));

2004

2005

}

2006

2007

/*@C

2008

DMPlexGetSupport - Return the points on the out-edges for this point in the DAG

2009

2010

Not collective

2011

2012

Input Parameters:

2013

+ mesh - The DMPlex

2014

- p - The point, which must lie in the chart set with DMPlexSetChart()

2015

2016

Output Parameter:

2017

. support - An array of points which are on the out-edges for point p

2018

2019

Level: beginner

2020

2021

Fortran Notes:

2022

Since it returns an array, this routine is only available in Fortran 90, and you must

2023

include petsc.h90 in your code.

2024

You must also call DMPlexRestoreSupport() after you finish using the returned array.

2025

DMPlexRestoreSupport() is not needed/available in C.

2026

2027

.seealso: DMPlexCreate(), DMPlexSetCone(), DMPlexSetChart(), DMPlexGetCone()

2028

@*/

2029

PetscErrorCode DMPlexGetSupport(DM dm, PetscInt p, const PetscInt *support[])

2030

{

2031

DM_Plex *mesh = (DM_Plex*) dm->data;

2032

PetscInt off;

2033

PetscErrorCode ierr;

2034

2035

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 2035; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2036

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2036,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2036,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2036,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2036,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

2037

PetscValidPointer(support, 3)do { if (!support) return PetscError(((MPI_Comm)0x44000001),2037
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(support,PETSC_CHAR)) return PetscError((
(MPI_Comm)0x44000001),2037,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",3);
} while (0);

2038

ierr = PetscSectionGetOffset(mesh->supportSection, p, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2038,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2039

*support = &mesh->supports[off];

2040

2041

}

2042

2043

/*@

2044

DMPlexSetSupport - Set the points on the out-edges for this point in the DAG, that is the list of points that this point covers

2045

2046

Not collective

2047

2048

Input Parameters:

2049

+ mesh - The DMPlex

2050

. p - The point, which must lie in the chart set with DMPlexSetChart()

2051

- support - An array of points which are on the out-edges for point p

2052

2053

Output Parameter:

2054

2055

Note:

2056

This should be called after all calls to DMPlexSetSupportSize() and DMSetUp().

2057

2058

Level: beginner

2059

2060

.seealso: DMPlexSetCone(), DMPlexSetConeSize(), DMPlexCreate(), DMPlexGetSupport(), DMPlexSetChart(), DMPlexSetSupportSize(), DMSetUp()

2061

@*/

2062

PetscErrorCode DMPlexSetSupport(DM dm, PetscInt p, const PetscInt support[])

2063

{

2064

DM_Plex *mesh = (DM_Plex*) dm->data;

2065

PetscInt pStart, pEnd;

2066

PetscInt dof, off, c;

2067

PetscErrorCode ierr;

2068

2069

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 2069; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2070

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2070,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2070,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2070,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2070,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

2071

ierr = PetscSectionGetChart(mesh->supportSection, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2071,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2072

ierr = PetscSectionGetDof(mesh->supportSection, p, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2072,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2073

if (dof) PetscValidPointer(support, 3)do { if (!support) return PetscError(((MPI_Comm)0x44000001),2073
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(support,PETSC_CHAR)) return PetscError((
(MPI_Comm)0x44000001),2073,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",3);
} while (0);

2074

ierr = PetscSectionGetOffset(mesh->supportSection, p, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2074,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2075

if ((p < pStart) || (p >= pEnd)) SETERRQ3(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Mesh point %D is not in the valid range [%D, %D)", p, pStart, pEnd)return PetscError(PetscObjectComm((PetscObject)dm),2075,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Mesh point %D is not in the valid range [%D, %D)",p,pStart,
pEnd);

2076

for (c = 0; c < dof; ++c) {

2077

if ((support[c] < pStart) || (support[c] >= pEnd)) SETERRQ3(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Support point %D is not in the valid range [%D, %D)", support[c], pStart, pEnd)return PetscError(PetscObjectComm((PetscObject)dm),2077,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Support point %D is not in the valid range [%D, %D)",support
[c],pStart,pEnd);

2078

mesh->supports[off+c] = support[c];

2079

}

2080

2081

}

2082

2083

/*@

2084

DMPlexInsertSupport - Insert a point into the out-edges for the point p in the DAG

2085

2086

Not collective

2087

2088

Input Parameters:

2089

+ mesh - The DMPlex

2090

. p - The point, which must lie in the chart set with DMPlexSetChart()

2091

. supportPos - The local index in the cone where the point should be put

2092

- supportPoint - The mesh point to insert

2093

2094

Level: beginner

2095

2096

.seealso: DMPlexCreate(), DMPlexGetCone(), DMPlexSetChart(), DMPlexSetConeSize(), DMSetUp()

2097

@*/

2098

PetscErrorCode DMPlexInsertSupport(DM dm, PetscInt p, PetscInt supportPos, PetscInt supportPoint)

2099

{

2100

DM_Plex *mesh = (DM_Plex*) dm->data;

2101

PetscInt pStart, pEnd;

2102

PetscInt dof, off;

2103

PetscErrorCode ierr;

2104

2105

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 2105; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2106

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2106,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2106,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2106,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2106,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

2107

ierr = PetscSectionGetChart(mesh->supportSection, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2107,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2108

ierr = PetscSectionGetDof(mesh->supportSection, p, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2108,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2109

ierr = PetscSectionGetOffset(mesh->supportSection, p, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2109,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2110

if ((p < pStart) || (p >= pEnd)) SETERRQ3(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Mesh point %D is not in the valid range [%D, %D)", p, pStart, pEnd)return PetscError(PetscObjectComm((PetscObject)dm),2110,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Mesh point %D is not in the valid range [%D, %D)",p,pStart,
pEnd);

2111

if ((supportPoint < pStart) || (supportPoint >= pEnd)) SETERRQ3(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Support point %D is not in the valid range [%D, %D)", supportPoint, pStart, pEnd)return PetscError(PetscObjectComm((PetscObject)dm),2111,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Support point %D is not in the valid range [%D, %D)",supportPoint
,pStart,pEnd);

2112

if (supportPos >= dof) SETERRQ3(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Support position %D of point %D is not in the valid range [0, %D)", supportPos, p, dof)return PetscError(PetscObjectComm((PetscObject)dm),2112,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Support position %D of point %D is not in the valid range [0, %D)"
,supportPos,p,dof);

2113

mesh->supports[off+supportPos] = supportPoint;

2114

2115

}

2116

2117

/*@C

2118

DMPlexGetTransitiveClosure - Return the points on the transitive closure of the in-edges or out-edges for this point in the DAG

2119

2120

Not collective

2121

2122

Input Parameters:

2123

+ mesh - The DMPlex

2124

. p - The point, which must lie in the chart set with DMPlexSetChart()

2125

. useCone - PETSC_TRUE for in-edges, otherwise use out-edges

2126

- points - If points is NULL on input, internal storage will be returned, otherwise the provided array is used

2127

2128

Output Parameters:

2129

+ numPoints - The number of points in the closure, so points[] is of size 2*numPoints

2130

- points - The points and point orientations, interleaved as pairs [p0, o0, p1, o1, ...]

2131

2132

Note:

2133

If using internal storage (points is NULL on input), each call overwrites the last output.

2134

2135

Fortran Notes:

2136

Since it returns an array, this routine is only available in Fortran 90, and you must

2137

include petsc.h90 in your code.

2138

2139

The numPoints argument is not present in the Fortran 90 binding since it is internal to the array.

2140

2141

Level: beginner

2142

2143

.seealso: DMPlexRestoreTransitiveClosure(), DMPlexCreate(), DMPlexSetCone(), DMPlexSetChart(), DMPlexGetCone()

2144

@*/

2145

PetscErrorCode DMPlexGetTransitiveClosure(DM dm, PetscInt p, PetscBool useCone, PetscInt *numPoints, PetscInt *points[])

2146

{

2147

DM_Plex *mesh = (DM_Plex*) dm->data;

2148

PetscInt *closure, *fifo;

2149

const PetscInt *tmp = NULL((void*)0), *tmpO = NULL((void*)0);

2150

PetscInt tmpSize, t;

2151

PetscInt depth = 0, maxSize;

2152

PetscInt closureSize = 2, fifoSize = 0, fifoStart = 0;

2153

PetscErrorCode ierr;

2154

2155

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 2155; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2156

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2156,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2156,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2156,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2156,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

2157

ierr = DMPlexGetDepth(dm, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2157,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2158

/* This is only 1-level */

2159

if (useCone) {

2160

ierr = DMPlexGetConeSize(dm, p, &tmpSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2160,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2161

ierr = DMPlexGetCone(dm, p, &tmp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2161,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2162

ierr = DMPlexGetConeOrientation(dm, p, &tmpO);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2162,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2163

} else {

2164

ierr = DMPlexGetSupportSize(dm, p, &tmpSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2164,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2165

ierr = DMPlexGetSupport(dm, p, &tmp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2165,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2166

}

2167

if (depth == 1) {

2168

if (*points) {

2169

closure = *points;

2170

} else {

2171

maxSize = 2*(PetscMax(mesh->maxConeSize, mesh->maxSupportSize)(((mesh->maxConeSize)<(mesh->maxSupportSize)) ? (mesh
->maxSupportSize) : (mesh->maxConeSize))+1);

2172

ierr = DMGetWorkArray(dm, maxSize, MPIU_INT((MPI_Datatype)0x4c000405), &closure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2172,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2173

}

2174

closure[0] = p; closure[1] = 0;

2175

for (t = 0; t < tmpSize; ++t, closureSize += 2) {

2176

closure[closureSize] = tmp[t];

2177

closure[closureSize+1] = tmpO ? tmpO[t] : 0;

2178

}

2179

if (numPoints) *numPoints = closureSize/2;

2180

if (points) *points = closure;

2181

2182

}

2183

{

2184

PetscInt c, coneSeries, s,supportSeries;

2185

2186

c = mesh->maxConeSize;

2187

coneSeries = (c > 1) ? ((PetscPowInt(c,depth+1)-1)/(c-1)) : depth+1;

2188

s = mesh->maxSupportSize;

2189

supportSeries = (s > 1) ? ((PetscPowInt(s,depth+1)-1)/(s-1)) : depth+1;

2190

maxSize = 2*PetscMax(coneSeries,supportSeries)(((coneSeries)<(supportSeries)) ? (supportSeries) : (coneSeries
));

2191

}

2192

ierr = DMGetWorkArray(dm, maxSize, MPIU_INT((MPI_Datatype)0x4c000405), &fifo);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2192,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2193

if (*points) {

2194

closure = *points;

2195

} else {

2196

ierr = DMGetWorkArray(dm, maxSize, MPIU_INT((MPI_Datatype)0x4c000405), &closure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2196,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2197

}

2198

closure[0] = p; closure[1] = 0;

2199

for (t = 0; t < tmpSize; ++t, closureSize += 2, fifoSize += 2) {

2200

const PetscInt cp = tmp[t];

2201

const PetscInt co = tmpO ? tmpO[t] : 0;

2202

2203

closure[closureSize] = cp;

2204

closure[closureSize+1] = co;

2205

fifo[fifoSize] = cp;

2206

fifo[fifoSize+1] = co;

2207

}

2208

/* Should kick out early when depth is reached, rather than checking all vertices for empty cones */

2209

while (fifoSize - fifoStart) {

2210

const PetscInt q = fifo[fifoStart];

2211

const PetscInt o = fifo[fifoStart+1];

2212

const PetscInt rev = o >= 0 ? 0 : 1;

2213

const PetscInt off = rev ? -(o+1) : o;

2214

2215

if (useCone) {

2216

ierr = DMPlexGetConeSize(dm, q, &tmpSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2216,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2217

ierr = DMPlexGetCone(dm, q, &tmp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2217,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2218

ierr = DMPlexGetConeOrientation(dm, q, &tmpO);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2218,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2219

} else {

2220

ierr = DMPlexGetSupportSize(dm, q, &tmpSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2220,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2221

ierr = DMPlexGetSupport(dm, q, &tmp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2221,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2222

tmpO = NULL((void*)0);

2223

}

2224

for (t = 0; t < tmpSize; ++t) {

2225

const PetscInt i = ((rev ? tmpSize-t : t) + off)%tmpSize;

2226

const PetscInt cp = tmp[i];

2227

/* Must propogate orientation: When we reverse orientation, we both reverse the direction of iteration and start at the other end of the chain. */

2228

/* HACK: It is worse to get the size here, than to change the interpretation of -(*+1)

2229

const PetscInt co = tmpO ? (rev ? -(tmpO[i]+1) : tmpO[i]) : 0; */

2230

PetscInt co = tmpO ? tmpO[i] : 0;

2231

PetscInt c;

2232

2233

if (rev) {

2234

PetscInt childSize, coff;

2235

ierr = DMPlexGetConeSize(dm, cp, &childSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2235,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2236

coff = tmpO[i] < 0 ? -(tmpO[i]+1) : tmpO[i];

2237

co = childSize ? -(((coff+childSize-1)%childSize)+1) : 0;

2238

}

2239

/* Check for duplicate */

2240

for (c = 0; c < closureSize; c += 2) {

2241

if (closure[c] == cp) break;

2242

}

2243

if (c == closureSize) {

2244

closure[closureSize] = cp;

2245

closure[closureSize+1] = co;

2246

fifo[fifoSize] = cp;

2247

fifo[fifoSize+1] = co;

2248

closureSize += 2;

2249

fifoSize += 2;

2250

}

2251

}

2252

fifoStart += 2;

2253

}

2254

if (numPoints) *numPoints = closureSize/2;

2255

if (points) *points = closure;

2256

ierr = DMRestoreWorkArray(dm, maxSize, MPIU_INT((MPI_Datatype)0x4c000405), &fifo);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2256,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2257

2258

}

2259

2260

/*@C

2261

DMPlexGetTransitiveClosure_Internal - Return the points on the transitive closure of the in-edges or out-edges for this point in the DAG with a specified initial orientation

2262

2263

Not collective

2264

2265

Input Parameters:

2266

+ mesh - The DMPlex

2267

. p - The point, which must lie in the chart set with DMPlexSetChart()

2268

. orientation - The orientation of the point

2269

. useCone - PETSC_TRUE for in-edges, otherwise use out-edges

2270

- points - If points is NULL on input, internal storage will be returned, otherwise the provided array is used

2271

2272

Output Parameters:

2273

+ numPoints - The number of points in the closure, so points[] is of size 2*numPoints

2274

- points - The points and point orientations, interleaved as pairs [p0, o0, p1, o1, ...]

2275

2276

Note:

2277

If using internal storage (points is NULL on input), each call overwrites the last output.

2278

2279

Fortran Notes:

2280

Since it returns an array, this routine is only available in Fortran 90, and you must

2281

include petsc.h90 in your code.

2282

2283

The numPoints argument is not present in the Fortran 90 binding since it is internal to the array.

2284

2285

Level: beginner

2286

2287

.seealso: DMPlexRestoreTransitiveClosure(), DMPlexCreate(), DMPlexSetCone(), DMPlexSetChart(), DMPlexGetCone()

2288

@*/

2289

PetscErrorCode DMPlexGetTransitiveClosure_Internal(DM dm, PetscInt p, PetscInt ornt, PetscBool useCone, PetscInt *numPoints, PetscInt *points[])

2290

{

2291

DM_Plex *mesh = (DM_Plex*) dm->data;

2292

PetscInt *closure, *fifo;

2293

const PetscInt *tmp = NULL((void*)0), *tmpO = NULL((void*)0);

2294

PetscInt tmpSize, t;

2295

PetscInt depth = 0, maxSize;

2296

PetscInt closureSize = 2, fifoSize = 0, fifoStart = 0;

2297

PetscErrorCode ierr;

2298

2299

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 2299; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2300

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2300,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2300,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2300,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2300,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

2301

ierr = DMPlexGetDepth(dm, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2301,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2302

/* This is only 1-level */

2303

if (useCone) {

2304

ierr = DMPlexGetConeSize(dm, p, &tmpSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2304,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2305

ierr = DMPlexGetCone(dm, p, &tmp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2305,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2306

ierr = DMPlexGetConeOrientation(dm, p, &tmpO);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2306,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2307

} else {

2308

ierr = DMPlexGetSupportSize(dm, p, &tmpSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2308,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2309

ierr = DMPlexGetSupport(dm, p, &tmp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2309,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2310

}

2311

if (depth == 1) {

2312

if (*points) {

2313

closure = *points;

2314

} else {

2315

maxSize = 2*(PetscMax(mesh->maxConeSize, mesh->maxSupportSize)(((mesh->maxConeSize)<(mesh->maxSupportSize)) ? (mesh
->maxSupportSize) : (mesh->maxConeSize))+1);

2316

ierr = DMGetWorkArray(dm, maxSize, MPIU_INT((MPI_Datatype)0x4c000405), &closure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2316,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2317

}

2318

closure[0] = p; closure[1] = ornt;

2319

for (t = 0; t < tmpSize; ++t, closureSize += 2) {

2320

const PetscInt i = ornt >= 0 ? (t+ornt)%tmpSize : (-(ornt+1) + tmpSize-t)%tmpSize;

2321

closure[closureSize] = tmp[i];

2322

closure[closureSize+1] = tmpO ? tmpO[i] : 0;

2323

}

2324

if (numPoints) *numPoints = closureSize/2;

2325

if (points) *points = closure;

2326

2327

}

2328

{

2329

PetscInt c, coneSeries, s,supportSeries;

2330

2331

c = mesh->maxConeSize;

2332

coneSeries = (c > 1) ? ((PetscPowInt(c,depth+1)-1)/(c-1)) : depth+1;

2333

s = mesh->maxSupportSize;

2334

supportSeries = (s > 1) ? ((PetscPowInt(s,depth+1)-1)/(s-1)) : depth+1;

2335

maxSize = 2*PetscMax(coneSeries,supportSeries)(((coneSeries)<(supportSeries)) ? (supportSeries) : (coneSeries
));

2336

}

2337

ierr = DMGetWorkArray(dm, maxSize, MPIU_INT((MPI_Datatype)0x4c000405), &fifo);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2337,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2338

if (*points) {

2339

closure = *points;

2340

} else {

2341

ierr = DMGetWorkArray(dm, maxSize, MPIU_INT((MPI_Datatype)0x4c000405), &closure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2341,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2342

}

2343

closure[0] = p; closure[1] = ornt;

2344

for (t = 0; t < tmpSize; ++t, closureSize += 2, fifoSize += 2) {

2345

const PetscInt i = ornt >= 0 ? (t+ornt)%tmpSize : (-(ornt+1) + tmpSize-t)%tmpSize;

2346

const PetscInt cp = tmp[i];

2347

PetscInt co = tmpO ? tmpO[i] : 0;

2348

2349

if (ornt < 0) {

2350

PetscInt childSize, coff;

2351

ierr = DMPlexGetConeSize(dm, cp, &childSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2351,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2352

coff = co < 0 ? -(tmpO[i]+1) : tmpO[i];

2353

co = childSize ? -(((coff+childSize-1)%childSize)+1) : 0;

2354

}

2355

closure[closureSize] = cp;

2356

closure[closureSize+1] = co;

2357

fifo[fifoSize] = cp;

2358

fifo[fifoSize+1] = co;

2359

}

2360

/* Should kick out early when depth is reached, rather than checking all vertices for empty cones */

2361

while (fifoSize - fifoStart) {

2362

const PetscInt q = fifo[fifoStart];

2363

const PetscInt o = fifo[fifoStart+1];

2364

const PetscInt rev = o >= 0 ? 0 : 1;

2365

const PetscInt off = rev ? -(o+1) : o;

2366

2367

if (useCone) {

2368

ierr = DMPlexGetConeSize(dm, q, &tmpSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2368,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2369

ierr = DMPlexGetCone(dm, q, &tmp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2369,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2370

ierr = DMPlexGetConeOrientation(dm, q, &tmpO);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2370,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2371

} else {

2372

ierr = DMPlexGetSupportSize(dm, q, &tmpSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2372,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2373

ierr = DMPlexGetSupport(dm, q, &tmp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2373,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2374

tmpO = NULL((void*)0);

2375

}

2376

for (t = 0; t < tmpSize; ++t) {

2377

const PetscInt i = ((rev ? tmpSize-t : t) + off)%tmpSize;

2378

const PetscInt cp = tmp[i];

2379

/* Must propogate orientation: When we reverse orientation, we both reverse the direction of iteration and start at the other end of the chain. */

2380

/* HACK: It is worse to get the size here, than to change the interpretation of -(*+1)

2381

const PetscInt co = tmpO ? (rev ? -(tmpO[i]+1) : tmpO[i]) : 0; */

2382

PetscInt co = tmpO ? tmpO[i] : 0;

2383

PetscInt c;

2384

2385

if (rev) {

2386

PetscInt childSize, coff;

2387

ierr = DMPlexGetConeSize(dm, cp, &childSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2387,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2388

coff = tmpO[i] < 0 ? -(tmpO[i]+1) : tmpO[i];

2389

co = childSize ? -(((coff+childSize-1)%childSize)+1) : 0;

2390

}

2391

/* Check for duplicate */

2392

for (c = 0; c < closureSize; c += 2) {

2393

if (closure[c] == cp) break;

2394

}

2395

if (c == closureSize) {

2396

closure[closureSize] = cp;

2397

closure[closureSize+1] = co;

2398

fifo[fifoSize] = cp;

2399

fifo[fifoSize+1] = co;

2400

closureSize += 2;

2401

fifoSize += 2;

2402

}

2403

}

2404

fifoStart += 2;

2405

}

2406

if (numPoints) *numPoints = closureSize/2;

2407

if (points) *points = closure;

2408

ierr = DMRestoreWorkArray(dm, maxSize, MPIU_INT((MPI_Datatype)0x4c000405), &fifo);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2408,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2409

2410

}

2411

2412

/*@C

2413

DMPlexRestoreTransitiveClosure - Restore the array of points on the transitive closure of the in-edges or out-edges for this point in the DAG

2414

2415

Not collective

2416

2417

Input Parameters:

2418

+ mesh - The DMPlex

2419

. p - The point, which must lie in the chart set with DMPlexSetChart()

2420

. useCone - PETSC_TRUE for in-edges, otherwise use out-edges

2421

. numPoints - The number of points in the closure, so points[] is of size 2*numPoints, zeroed on exit

2422

- points - The points and point orientations, interleaved as pairs [p0, o0, p1, o1, ...], zeroed on exit

2423

2424

Note:

2425

If not using internal storage (points is not NULL on input), this call is unnecessary

2426

2427

Fortran Notes:

2428

Since it returns an array, this routine is only available in Fortran 90, and you must

2429

include petsc.h90 in your code.

2430

2431

The numPoints argument is not present in the Fortran 90 binding since it is internal to the array.

2432

2433

Level: beginner

2434

2435

.seealso: DMPlexGetTransitiveClosure(), DMPlexCreate(), DMPlexSetCone(), DMPlexSetChart(), DMPlexGetCone()

2436

@*/

2437

PetscErrorCode DMPlexRestoreTransitiveClosure(DM dm, PetscInt p, PetscBool useCone, PetscInt *numPoints, PetscInt *points[])

2438

{

2439

PetscErrorCode ierr;

2440

2441

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 2441; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2442

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2442,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2442,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2442,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2442,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

2443

if (numPoints) PetscValidIntPointer(numPoints,4)do { if (!numPoints) return PetscError(((MPI_Comm)0x44000001)
,2443,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",4); if
(!PetscCheckPointer(numPoints,PETSC_INT)) return PetscError(
((MPI_Comm)0x44000001),2443,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer to Int: Parameter # %d"
,4); } while (0);

2444

if (points) PetscValidPointer(points,5)do { if (!points) return PetscError(((MPI_Comm)0x44000001),2444
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",5); if
(!PetscCheckPointer(points,PETSC_CHAR)) return PetscError(((
MPI_Comm)0x44000001),2444,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",5);
} while (0);

2445

ierr = DMRestoreWorkArray(dm, 0, MPIU_INT((MPI_Datatype)0x4c000405), points);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2445,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2446

if (numPoints) *numPoints = 0;

2447

2448

}

2449

2450

/*@

2451

DMPlexGetMaxSizes - Return the maximum number of in-edges (cone) and out-edges (support) for any point in the DAG

2452

2453

Not collective

2454

2455

Input Parameter:

2456

. mesh - The DMPlex

2457

2458

Output Parameters:

2459

+ maxConeSize - The maximum number of in-edges

2460

- maxSupportSize - The maximum number of out-edges

2461

2462

Level: beginner

2463

2464

.seealso: DMPlexCreate(), DMPlexSetConeSize(), DMPlexSetChart()

2465

@*/

2466

PetscErrorCode DMPlexGetMaxSizes(DM dm, PetscInt *maxConeSize, PetscInt *maxSupportSize)

2467

{

2468

DM_Plex *mesh = (DM_Plex*) dm->data;

2469

2470

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 2470; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2471

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2471,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2471,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2471,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2471,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

2472

if (maxConeSize) *maxConeSize = mesh->maxConeSize;

2473

if (maxSupportSize) *maxSupportSize = mesh->maxSupportSize;

2474

2475

}

2476

2477

PetscErrorCode DMSetUp_Plex(DM dm)

2478

{

2479

DM_Plex *mesh = (DM_Plex*) dm->data;

2480

PetscInt size;

2481

PetscErrorCode ierr;

2482

2483

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 2483; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2484

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2484,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2484,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2484,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2484,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

2485

ierr = PetscSectionSetUp(mesh->coneSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2485,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2486

ierr = PetscSectionGetStorageSize(mesh->coneSection, &size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2486,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2487

ierr = PetscMalloc1(size, &mesh->cones)PetscMallocA(1,PETSC_FALSE,2487,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(size)*sizeof(**(&mesh->cones)),(&mesh->
cones));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2487,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2488

ierr = PetscCalloc1(size, &mesh->coneOrientations)PetscMallocA(1,PETSC_TRUE,2488,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(size)*sizeof(**(&mesh->coneOrientations)),(&
mesh->coneOrientations));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2488,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2489

if (mesh->maxSupportSize) {

2490

ierr = PetscSectionSetUp(mesh->supportSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2490,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2491

ierr = PetscSectionGetStorageSize(mesh->supportSection, &size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2491,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2492

ierr = PetscMalloc1(size, &mesh->supports)PetscMallocA(1,PETSC_FALSE,2492,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(size)*sizeof(**(&mesh->supports)),(&mesh
->supports));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2492,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2493

}

2494

2495

}

2496

2497

PetscErrorCode DMCreateSubDM_Plex(DM dm, PetscInt numFields, const PetscInt fields[], IS *is, DM *subdm)

2498

{

2499

PetscErrorCode ierr;

2500

2501

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 2501; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2502

if (subdm) {ierr = DMClone(dm, subdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2502,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

2503

ierr = DMCreateSectionSubDM(dm, numFields, fields, is, subdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2503,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2504

if (subdm) {(*subdm)->useNatural = dm->useNatural;}

2505

if (dm->useNatural && dm->sfMigration) {

2506

PetscSF sfMigrationInv,sfNatural;

2507

PetscSection section, sectionSeq;

2508

2509

(*subdm)->sfMigration = dm->sfMigration;

2510

ierr = PetscObjectReference((PetscObject) dm->sfMigration);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2510,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2511

ierr = DMGetSection((*subdm), &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2511,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2511,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2512

ierr = PetscSFCreateInverseSF((*subdm)->sfMigration, &sfMigrationInv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2512,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2513

ierr = PetscSectionCreate(PetscObjectComm((PetscObject) (*subdm)), &sectionSeq);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2513,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2514

ierr = PetscSFDistributeSection(sfMigrationInv, section, NULL((void*)0), sectionSeq);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2514,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2515

2516

ierr = DMPlexCreateGlobalToNaturalSF(*subdm, sectionSeq, (*subdm)->sfMigration, &sfNatural);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2516,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2517

(*subdm)->sfNatural = sfNatural;

2518

ierr = PetscSectionDestroy(&sectionSeq);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2518,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2519

ierr = PetscSFDestroy(&sfMigrationInv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2519,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2520

}

2521

2522

}

2523

2524

PetscErrorCode DMCreateSuperDM_Plex(DM dms[], PetscInt len, IS **is, DM *superdm)

2525

{

2526

PetscErrorCode ierr;

2527

PetscInt i = 0;

2528

2529

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 2529; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2530

ierr = DMClone(dms[0], superdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2530,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2531

ierr = DMCreateSectionSuperDM(dms, len, is, superdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2531,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2532

(*superdm)->useNatural = PETSC_FALSE;

2533

for (i = 0; i < len; i++){

2534

if (dms[i]->useNatural && dms[i]->sfMigration) {

2535

PetscSF sfMigrationInv,sfNatural;

2536

PetscSection section, sectionSeq;

2537

2538

(*superdm)->sfMigration = dms[i]->sfMigration;

2539

ierr = PetscObjectReference((PetscObject) dms[i]->sfMigration);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2539,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2540

(*superdm)->useNatural = PETSC_TRUE;

2541

ierr = DMGetSection((*superdm), &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2541,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2542

ierr = PetscSFCreateInverseSF((*superdm)->sfMigration, &sfMigrationInv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2542,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2543

ierr = PetscSectionCreate(PetscObjectComm((PetscObject) (*superdm)), &sectionSeq);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2543,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2544

ierr = PetscSFDistributeSection(sfMigrationInv, section, NULL((void*)0), sectionSeq);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2544,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2545

2546

ierr = DMPlexCreateGlobalToNaturalSF(*superdm, sectionSeq, (*superdm)->sfMigration, &sfNatural);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2546,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2547

(*superdm)->sfNatural = sfNatural;

2548

ierr = PetscSectionDestroy(&sectionSeq);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2548,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2549

ierr = PetscSFDestroy(&sfMigrationInv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2549,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2550

break;

2551

}

2552

}

2553

2554

}

2555

2556

/*@

2557

DMPlexSymmetrize - Create support (out-edge) information from cone (in-edge) information

2558

2559

Not collective

2560

2561

Input Parameter:

2562

. mesh - The DMPlex

2563

2564

Output Parameter:

2565

2566

Note:

2567

This should be called after all calls to DMPlexSetCone()

2568

2569

Level: beginner

2570

2571

.seealso: DMPlexCreate(), DMPlexSetChart(), DMPlexSetConeSize(), DMPlexSetCone()

2572

@*/

2573

PetscErrorCode DMPlexSymmetrize(DM dm)

2574

{

2575

DM_Plex *mesh = (DM_Plex*) dm->data;

2576

PetscInt *offsets;

2577

PetscInt supportSize;

2578

PetscInt pStart, pEnd, p;

2579

PetscErrorCode ierr;

2580

2581

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 2581; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2582

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2582,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2582,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2582,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2582,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

2583

if (mesh->supports) SETERRQ(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONGSTATE, "Supports were already setup in this DMPlex")return PetscError(PetscObjectComm((PetscObject)dm),2583,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",73,PETSC_ERROR_INITIAL
,"Supports were already setup in this DMPlex");

2584

ierr = PetscLogEventBegin(DMPLEX_Symmetrize,dm,0,0,0)(((PetscLogPLB && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[DMPLEX_Symmetrize].active) ? (*PetscLogPLB)((DMPLEX_Symmetrize
),0,(PetscObject)(dm),(PetscObject)(0),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2584,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2585

/* Calculate support sizes */

2586

ierr = DMPlexGetChart(dm, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2586,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2587

for (p = pStart; p < pEnd; ++p) {

2588

PetscInt dof, off, c;

2589

2590

ierr = PetscSectionGetDof(mesh->coneSection, p, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2590,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2591

ierr = PetscSectionGetOffset(mesh->coneSection, p, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2591,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2592

for (c = off; c < off+dof; ++c) {

2593

ierr = PetscSectionAddDof(mesh->supportSection, mesh->cones[c], 1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2593,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2594

}

2595

}

2596

for (p = pStart; p < pEnd; ++p) {

2597

PetscInt dof;

2598

2599

ierr = PetscSectionGetDof(mesh->supportSection, p, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2599,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2600

2601

mesh->maxSupportSize = PetscMax(mesh->maxSupportSize, dof)(((mesh->maxSupportSize)<(dof)) ? (dof) : (mesh->maxSupportSize
));

2602

}

2603

ierr = PetscSectionSetUp(mesh->supportSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2603,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2604

/* Calculate supports */

2605

ierr = PetscSectionGetStorageSize(mesh->supportSection, &supportSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2605,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2606

ierr = PetscMalloc1(supportSize, &mesh->supports)PetscMallocA(1,PETSC_FALSE,2606,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(supportSize)*sizeof(**(&mesh->supports)),(&
mesh->supports));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2606,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2607

ierr = PetscCalloc1(pEnd - pStart, &offsets)PetscMallocA(1,PETSC_TRUE,2607,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(pEnd - pStart)*sizeof(**(&offsets)),(&offsets
));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2607,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2608

for (p = pStart; p < pEnd; ++p) {

2609

PetscInt dof, off, c;

2610

2611

ierr = PetscSectionGetDof(mesh->coneSection, p, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2611,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2612

ierr = PetscSectionGetOffset(mesh->coneSection, p, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2612,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2613

for (c = off; c < off+dof; ++c) {

2614

const PetscInt q = mesh->cones[c];

2615

PetscInt offS;

2616

2617

ierr = PetscSectionGetOffset(mesh->supportSection, q, &offS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2617,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2618

2619

mesh->supports[offS+offsets[q]] = p;

2620

++offsets[q];

2621

}

2622

}

2623

ierr = PetscFree(offsets)((*PetscTrFree)((void*)(offsets),2623,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((offsets) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2623,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2624

ierr = PetscLogEventEnd(DMPLEX_Symmetrize,dm,0,0,0)(((PetscLogPLE && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[DMPLEX_Symmetrize].active) ? (*PetscLogPLE)((DMPLEX_Symmetrize
),0,(PetscObject)(dm),(PetscObject)(0),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2624,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2625

2626

}

2627

2628

static PetscErrorCode DMPlexCreateDepthStratum(DM dm, DMLabel label, PetscInt depth, PetscInt pStart, PetscInt pEnd)

2629

{

2630

IS stratumIS;

2631

PetscErrorCode ierr;

2632

2633

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 2633; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2634

if (pStart >= pEnd) PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);

2635

#if defined(PETSC_USE_DEBUG1)

2636

{

2637

PetscInt qStart, qEnd, numLevels, level;

2638

PetscBool overlap = PETSC_FALSE;

2639

ierr = DMLabelGetNumValues(label, &numLevels);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2639,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2640

for (level = 0; level < numLevels; level++) {

2641

ierr = DMLabelGetStratumBounds(label, level, &qStart, &qEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2641,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2642

if ((pStart >= qStart && pStart < qEnd) || (pEnd > qStart && pEnd <= qEnd)) {overlap = PETSC_TRUE; break;}

2643

}

2644

if (overlap) SETERRQ6(PETSC_COMM_SELF, PETSC_ERR_PLIB, "New depth %D range [%D,%D) overlaps with depth %D range [%D,%D)", depth, pStart, pEnd, level, qStart, qEnd)return PetscError(((MPI_Comm)0x44000001),2644,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,77,PETSC_ERROR_INITIAL,"New depth %D range [%D,%D) overlaps with depth %D range [%D,%D)"
,depth,pStart,pEnd,level,qStart,qEnd);

2645

}

2646

#endif

2647

ierr = ISCreateStride(PETSC_COMM_SELF((MPI_Comm)0x44000001), pEnd-pStart, pStart, 1, &stratumIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2647,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2648

ierr = DMLabelSetStratumIS(label, depth, stratumIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2648,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2649

ierr = ISDestroy(&stratumIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2649,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2650

2651

}

2652

2653

static PetscErrorCode DMPlexCreateDimStratum(DM,DMLabel,DMLabel,PetscInt,PetscInt);

2654

2655

/*@

2656

DMPlexStratify - The DAG for most topologies is a graded poset (https://en.wikipedia.org/wiki/Graded_poset), and

2657

can be illustrated by a Hasse Diagram (https://en.wikipedia.org/wiki/Hasse_diagram). The strata group all points of the

2658

same grade, and this function calculates the strata. This grade can be seen as the height (or depth) of the point in

2659

the DAG.

2660

2661

Collective on dm

2662

2663

Input Parameter:

2664

. mesh - The DMPlex

2665

2666

Output Parameter:

2667

2668

Notes:

2669

Concretely, DMPlexStratify() creates a new label named "depth" containing the dimension of each element: 0 for vertices,

2670

1 for edges, and so on. The depth label can be accessed through DMPlexGetDepthLabel() or DMPlexGetDepthStratum(), or

2671

manually via DMGetLabel(). The height is defined implicitly by height = maxDimension - depth, and can be accessed

2672

via DMPlexGetHeightStratum(). For example, cells have height 0 and faces have height 1.

2673

2674

DMPlexStratify() should be called after all calls to DMPlexSymmetrize()

2675

2676

Level: beginner

2677

2678

.seealso: DMPlexCreate(), DMPlexSymmetrize()

2679

@*/

2680

PetscErrorCode DMPlexStratify(DM dm)

2681

{

2682

DM_Plex *mesh = (DM_Plex*) dm->data;

2683

DMLabel label;

2684

PetscInt pStart, pEnd, p;

2685

PetscInt numRoots = 0, numLeaves = 0;

2686

PetscInt cMax, fMax, eMax, vMax;

2687

PetscErrorCode ierr;

2688

2689

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 2689; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2690

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2690,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2690,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2690,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2690,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

2691

ierr = PetscLogEventBegin(DMPLEX_Stratify,dm,0,0,0)(((PetscLogPLB && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[DMPLEX_Stratify].active) ? (*PetscLogPLB)((DMPLEX_Stratify),
0,(PetscObject)(dm),(PetscObject)(0),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2691,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2692

2693

/* Create depth label */

2694

ierr = DMPlexGetChart(dm, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2694,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2695

ierr = DMCreateLabel(dm, "depth");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2695,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2696

ierr = DMPlexGetDepthLabel(dm, &label);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2696,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2697

2698

{

2699

/* Initialize roots and count leaves */

2700

PetscInt sMin = PETSC_MAX_INT2147483647;

2701

PetscInt sMax = PETSC_MIN_INT(-2147483647 - 1);

2702

PetscInt coneSize, supportSize;

2703

2704

for (p = pStart; p < pEnd; ++p) {

2705

ierr = DMPlexGetConeSize(dm, p, &coneSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2705,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2706

ierr = DMPlexGetSupportSize(dm, p, &supportSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2706,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2707

if (!coneSize && supportSize) {

2708

sMin = PetscMin(p, sMin)(((p)<(sMin)) ? (p) : (sMin));

2709

sMax = PetscMax(p, sMax)(((p)<(sMax)) ? (sMax) : (p));

2710

++numRoots;

2711

} else if (!supportSize && coneSize) {

2712

++numLeaves;

2713

} else if (!supportSize && !coneSize) {

2714

/* Isolated points */

2715

sMin = PetscMin(p, sMin)(((p)<(sMin)) ? (p) : (sMin));

2716

sMax = PetscMax(p, sMax)(((p)<(sMax)) ? (sMax) : (p));

2717

}

2718

}

2719

ierr = DMPlexCreateDepthStratum(dm, label, 0, sMin, sMax+1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2719,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2720

}

2721

2722

if (numRoots + numLeaves == (pEnd - pStart)) {

2723

PetscInt sMin = PETSC_MAX_INT2147483647;

2724

PetscInt sMax = PETSC_MIN_INT(-2147483647 - 1);

2725

PetscInt coneSize, supportSize;

2726

2727

for (p = pStart; p < pEnd; ++p) {

2728

ierr = DMPlexGetConeSize(dm, p, &coneSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2728,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2729

ierr = DMPlexGetSupportSize(dm, p, &supportSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2729,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2730

if (!supportSize && coneSize) {

2731

sMin = PetscMin(p, sMin)(((p)<(sMin)) ? (p) : (sMin));

2732

sMax = PetscMax(p, sMax)(((p)<(sMax)) ? (sMax) : (p));

2733

}

2734

}

2735

ierr = DMPlexCreateDepthStratum(dm, label, 1, sMin, sMax+1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2735,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2736

} else {

2737

PetscInt level = 0;

2738

PetscInt qStart, qEnd, q;

2739

2740

ierr = DMLabelGetStratumBounds(label, level, &qStart, &qEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2740,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2741

while (qEnd > qStart) {

2742

PetscInt sMin = PETSC_MAX_INT2147483647;

2743

PetscInt sMax = PETSC_MIN_INT(-2147483647 - 1);

2744

2745

for (q = qStart; q < qEnd; ++q) {

2746

const PetscInt *support;

2747

PetscInt supportSize, s;

2748

2749

ierr = DMPlexGetSupportSize(dm, q, &supportSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2749,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2750

ierr = DMPlexGetSupport(dm, q, &support);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2750,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2751

for (s = 0; s < supportSize; ++s) {

2752

sMin = PetscMin(support[s], sMin)(((support[s])<(sMin)) ? (support[s]) : (sMin));

2753

sMax = PetscMax(support[s], sMax)(((support[s])<(sMax)) ? (sMax) : (support[s]));

2754

}

2755

}

2756

ierr = DMLabelGetNumValues(label, &level);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2756,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2757

ierr = DMPlexCreateDepthStratum(dm, label, level, sMin, sMax+1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2757,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2758

ierr = DMLabelGetStratumBounds(label, level, &qStart, &qEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2758,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2759

}

2760

}

2761

{ /* just in case there is an empty process */

2762

PetscInt numValues, maxValues = 0, v;

2763

2764

ierr = DMLabelGetNumValues(label, &numValues);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2764,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2765

ierr = MPI_Allreduce(&numValues,&maxValues,1,MPIU_INT,MPI_MAX,PetscObjectComm((PetscObject)dm))((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm
((PetscObject)dm))),0) || MPI_Allreduce((&numValues),(&
maxValues),(1),(((MPI_Datatype)0x4c000405)),((MPI_Op)(0x58000001
)),(PetscObjectComm((PetscObject)dm))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2765,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2766

for (v = numValues; v < maxValues; v++) {

2767

ierr = DMLabelAddStratum(label, v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2767,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2768

}

2769

}

2770

ierr = PetscObjectStateGet((PetscObject) label, &mesh->depthState);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2770,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2771

2772

ierr = DMPlexGetHybridBounds(dm, &cMax, &fMax, &eMax, &vMax);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2772,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2773

if (cMax >= 0 || fMax >= 0 || eMax >= 0 || vMax >= 0) {

2774

PetscInt dim;

2775

DMLabel dimLabel;

2776

2777

ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2777,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2778

ierr = DMCreateLabel(dm, "dim");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2778,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2779

ierr = DMGetLabel(dm, "dim", &dimLabel);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2779,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2780

if (cMax >= 0) {ierr = DMPlexCreateDimStratum(dm, label, dimLabel, dim, cMax);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2780,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

2781

if (fMax >= 0) {ierr = DMPlexCreateDimStratum(dm, label, dimLabel, dim - 1, fMax);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2781,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

2782

if (eMax >= 0) {ierr = DMPlexCreateDimStratum(dm, label, dimLabel, 1, eMax);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2782,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

2783

if (vMax >= 0) {ierr = DMPlexCreateDimStratum(dm, label, dimLabel, 0, vMax);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2783,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

2784

}

2785

ierr = PetscLogEventEnd(DMPLEX_Stratify,dm,0,0,0)(((PetscLogPLE && petsc_stageLog->stageInfo[petsc_stageLog
->curStage].perfInfo.active && petsc_stageLog->
stageInfo[petsc_stageLog->curStage].eventLog->eventInfo
[DMPLEX_Stratify].active) ? (*PetscLogPLE)((DMPLEX_Stratify),
0,(PetscObject)(dm),(PetscObject)(0),(PetscObject)(0),(PetscObject
)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2785,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2786

2787

}

2788

2789

/*@C

2790

DMPlexGetJoin - Get an array for the join of the set of points

2791

2792

Not Collective

2793

2794

Input Parameters:

2795

+ dm - The DMPlex object

2796

. numPoints - The number of input points for the join

2797

- points - The input points

2798

2799

Output Parameters:

2800

+ numCoveredPoints - The number of points in the join

2801

- coveredPoints - The points in the join

2802

2803

Level: intermediate

2804

2805

Note: Currently, this is restricted to a single level join

2806

2807

Fortran Notes:

2808

Since it returns an array, this routine is only available in Fortran 90, and you must

2809

include petsc.h90 in your code.

2810

2811

The numCoveredPoints argument is not present in the Fortran 90 binding since it is internal to the array.

2812

2813

.seealso: DMPlexRestoreJoin(), DMPlexGetMeet()

2814

@*/

2815

PetscErrorCode DMPlexGetJoin(DM dm, PetscInt numPoints, const PetscInt points[], PetscInt *numCoveredPoints, const PetscInt **coveredPoints)

2816

{

2817

DM_Plex *mesh = (DM_Plex*) dm->data;

2818

PetscInt *join[2];

2819

PetscInt joinSize, i = 0;

2820

PetscInt dof, off, p, c, m;

2821

PetscErrorCode ierr;

2822

2823

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 2823; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2824

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2824,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2824,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2824,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2824,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

2825

PetscValidIntPointer(points, 3)do { if (!points) return PetscError(((MPI_Comm)0x44000001),2825
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(points,PETSC_INT)) return PetscError(((MPI_Comm
)0x44000001),2825,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer to Int: Parameter # %d"
,3); } while (0);

2826

PetscValidIntPointer(numCoveredPoints, 4)do { if (!numCoveredPoints) return PetscError(((MPI_Comm)0x44000001
),2826,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",4); if
(!PetscCheckPointer(numCoveredPoints,PETSC_INT)) return PetscError
(((MPI_Comm)0x44000001),2826,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer to Int: Parameter # %d"
,4); } while (0);

2827

PetscValidPointer(coveredPoints, 5)do { if (!coveredPoints) return PetscError(((MPI_Comm)0x44000001
),2827,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",5); if
(!PetscCheckPointer(coveredPoints,PETSC_CHAR)) return PetscError
(((MPI_Comm)0x44000001),2827,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",5);
} while (0);

2828

ierr = DMGetWorkArray(dm, mesh->maxSupportSize, MPIU_INT((MPI_Datatype)0x4c000405), &join[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2828,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2829

ierr = DMGetWorkArray(dm, mesh->maxSupportSize, MPIU_INT((MPI_Datatype)0x4c000405), &join[1]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2829,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2830

/* Copy in support of first point */

2831

ierr = PetscSectionGetDof(mesh->supportSection, points[0], &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2831,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2832

ierr = PetscSectionGetOffset(mesh->supportSection, points[0], &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2832,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2833

for (joinSize = 0; joinSize < dof; ++joinSize) {

2834

join[i][joinSize] = mesh->supports[off+joinSize];

2835

}

2836

/* Check each successive support */

2837

for (p = 1; p < numPoints; ++p) {

2838

PetscInt newJoinSize = 0;

2839

2840

ierr = PetscSectionGetDof(mesh->supportSection, points[p], &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2840,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2841

ierr = PetscSectionGetOffset(mesh->supportSection, points[p], &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2841,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2842

for (c = 0; c < dof; ++c) {

2843

const PetscInt point = mesh->supports[off+c];

2844

2845

for (m = 0; m < joinSize; ++m) {

2846

if (point == join[i][m]) {

2847

join[1-i][newJoinSize++] = point;

2848

break;

2849

}

2850

}

2851

}

2852

joinSize = newJoinSize;

2853

i = 1-i;

2854

}

2855

*numCoveredPoints = joinSize;

2856

*coveredPoints = join[i];

2857

ierr = DMRestoreWorkArray(dm, mesh->maxSupportSize, MPIU_INT((MPI_Datatype)0x4c000405), &join[1-i]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2857,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2858

2859

}

2860

2861

/*@C

2862

DMPlexRestoreJoin - Restore an array for the join of the set of points

2863

2864

Not Collective

2865

2866

Input Parameters:

2867

+ dm - The DMPlex object

2868

. numPoints - The number of input points for the join

2869

- points - The input points

2870

2871

Output Parameters:

2872

+ numCoveredPoints - The number of points in the join

2873

- coveredPoints - The points in the join

2874

2875

Fortran Notes:

2876

Since it returns an array, this routine is only available in Fortran 90, and you must

2877

include petsc.h90 in your code.

2878

2879

The numCoveredPoints argument is not present in the Fortran 90 binding since it is internal to the array.

2880

2881

Level: intermediate

2882

2883

.seealso: DMPlexGetJoin(), DMPlexGetFullJoin(), DMPlexGetMeet()

2884

@*/

2885

PetscErrorCode DMPlexRestoreJoin(DM dm, PetscInt numPoints, const PetscInt points[], PetscInt *numCoveredPoints, const PetscInt **coveredPoints)

2886

{

2887

PetscErrorCode ierr;

2888

2889

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 2889; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2890

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2890,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2890,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2890,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2890,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

2891

if (points) PetscValidIntPointer(points,3)do { if (!points) return PetscError(((MPI_Comm)0x44000001),2891
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(points,PETSC_INT)) return PetscError(((MPI_Comm
)0x44000001),2891,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer to Int: Parameter # %d"
,3); } while (0);

2892

if (numCoveredPoints) PetscValidIntPointer(numCoveredPoints,4)do { if (!numCoveredPoints) return PetscError(((MPI_Comm)0x44000001
),2892,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",4); if
(!PetscCheckPointer(numCoveredPoints,PETSC_INT)) return PetscError
(((MPI_Comm)0x44000001),2892,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer to Int: Parameter # %d"
,4); } while (0);

2893

PetscValidPointer(coveredPoints, 5)do { if (!coveredPoints) return PetscError(((MPI_Comm)0x44000001
),2893,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",5); if
(!PetscCheckPointer(coveredPoints,PETSC_CHAR)) return PetscError
(((MPI_Comm)0x44000001),2893,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",5);
} while (0);

2894

ierr = DMRestoreWorkArray(dm, 0, MPIU_INT((MPI_Datatype)0x4c000405), (void*) coveredPoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2894,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2895

if (numCoveredPoints) *numCoveredPoints = 0;

2896

2897

}

2898

2899

/*@C

2900

DMPlexGetFullJoin - Get an array for the join of the set of points

2901

2902

Not Collective

2903

2904

Input Parameters:

2905

+ dm - The DMPlex object

2906

. numPoints - The number of input points for the join

2907

- points - The input points

2908

2909

Output Parameters:

2910

+ numCoveredPoints - The number of points in the join

2911

- coveredPoints - The points in the join

2912

2913

Fortran Notes:

2914

Since it returns an array, this routine is only available in Fortran 90, and you must

2915

include petsc.h90 in your code.

2916

2917

The numCoveredPoints argument is not present in the Fortran 90 binding since it is internal to the array.

2918

2919

Level: intermediate

2920

2921

.seealso: DMPlexGetJoin(), DMPlexRestoreJoin(), DMPlexGetMeet()

2922

@*/

2923

PetscErrorCode DMPlexGetFullJoin(DM dm, PetscInt numPoints, const PetscInt points[], PetscInt *numCoveredPoints, const PetscInt **coveredPoints)

2924

{

2925

DM_Plex *mesh = (DM_Plex*) dm->data;

2926

PetscInt *offsets, **closures;

2927

PetscInt *join[2];

2928

PetscInt depth = 0, maxSize, joinSize = 0, i = 0;

2929

PetscInt p, d, c, m, ms;

2930

PetscErrorCode ierr;

2931

2932

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 2932; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

2933

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),2933,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),2933,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),2933,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),2933,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

2934

PetscValidIntPointer(points, 3)do { if (!points) return PetscError(((MPI_Comm)0x44000001),2934
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(points,PETSC_INT)) return PetscError(((MPI_Comm
)0x44000001),2934,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer to Int: Parameter # %d"
,3); } while (0);

2935

PetscValidIntPointer(numCoveredPoints, 4)do { if (!numCoveredPoints) return PetscError(((MPI_Comm)0x44000001
),2935,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",4); if
(!PetscCheckPointer(numCoveredPoints,PETSC_INT)) return PetscError
(((MPI_Comm)0x44000001),2935,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer to Int: Parameter # %d"
,4); } while (0);

2936

PetscValidPointer(coveredPoints, 5)do { if (!coveredPoints) return PetscError(((MPI_Comm)0x44000001
),2936,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",5); if
(!PetscCheckPointer(coveredPoints,PETSC_CHAR)) return PetscError
(((MPI_Comm)0x44000001),2936,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",5);
} while (0);

2937

2938

ierr = DMPlexGetDepth(dm, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2938,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2939

ierr = PetscCalloc1(numPoints, &closures)PetscMallocA(1,PETSC_TRUE,2939,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(numPoints)*sizeof(**(&closures)),(&closures
));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2939,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2940

ierr = DMGetWorkArray(dm, numPoints*(depth+2), MPIU_INT((MPI_Datatype)0x4c000405), &offsets);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2940,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2941

ms = mesh->maxSupportSize;

2942

maxSize = (ms > 1) ? ((PetscPowInt(ms,depth+1)-1)/(ms-1)) : depth + 1;

2943

ierr = DMGetWorkArray(dm, maxSize, MPIU_INT((MPI_Datatype)0x4c000405), &join[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2943,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2944

ierr = DMGetWorkArray(dm, maxSize, MPIU_INT((MPI_Datatype)0x4c000405), &join[1]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2944,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2945

2946

for (p = 0; p < numPoints; ++p) {

2947

PetscInt closureSize;

2948

2949

ierr = DMPlexGetTransitiveClosure(dm, points[p], PETSC_FALSE, &closureSize, &closures[p]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2949,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2950

2951

offsets[p*(depth+2)+0] = 0;

2952

for (d = 0; d < depth+1; ++d) {

2953

PetscInt pStart, pEnd, i;

2954

2955

ierr = DMPlexGetDepthStratum(dm, d, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2955,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2956

for (i = offsets[p*(depth+2)+d]; i < closureSize; ++i) {

2957

if ((pStart > closures[p][i*2]) || (pEnd <= closures[p][i*2])) {

2958

offsets[p*(depth+2)+d+1] = i;

2959

break;

2960

}

2961

}

2962

if (i == closureSize) offsets[p*(depth+2)+d+1] = i;

2963

}

2964

if (offsets[p*(depth+2)+depth+1] != closureSize) SETERRQ2(PetscObjectComm((PetscObject)dm), PETSC_ERR_PLIB, "Total size of closure %D should be %D", offsets[p*(depth+2)+depth+1], closureSize)return PetscError(PetscObjectComm((PetscObject)dm),2964,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",77,PETSC_ERROR_INITIAL
,"Total size of closure %D should be %D",offsets[p*(depth+2)+
depth+1],closureSize);

2965

}

2966

for (d = 0; d < depth+1; ++d) {

2967

PetscInt dof;

2968

2969

/* Copy in support of first point */

2970

dof = offsets[d+1] - offsets[d];

2971

for (joinSize = 0; joinSize < dof; ++joinSize) {

2972

join[i][joinSize] = closures[0][(offsets[d]+joinSize)*2];

2973

}

2974

/* Check each successive cone */

2975

for (p = 1; p < numPoints && joinSize; ++p) {

2976

PetscInt newJoinSize = 0;

2977

2978

dof = offsets[p*(depth+2)+d+1] - offsets[p*(depth+2)+d];

2979

for (c = 0; c < dof; ++c) {

2980

const PetscInt point = closures[p][(offsets[p*(depth+2)+d]+c)*2];

2981

2982

for (m = 0; m < joinSize; ++m) {

2983

if (point == join[i][m]) {

2984

join[1-i][newJoinSize++] = point;

2985

break;

2986

}

2987

}

2988

}

2989

joinSize = newJoinSize;

2990

i = 1-i;

2991

}

2992

if (joinSize) break;

2993

}

2994

*numCoveredPoints = joinSize;

2995

*coveredPoints = join[i];

2996

for (p = 0; p < numPoints; ++p) {

2997

ierr = DMPlexRestoreTransitiveClosure(dm, points[p], PETSC_FALSE, NULL((void*)0), &closures[p]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2997,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

2998

}

2999

ierr = PetscFree(closures)((*PetscTrFree)((void*)(closures),2999,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((closures) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),2999,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3000

ierr = DMRestoreWorkArray(dm, numPoints*(depth+2), MPIU_INT((MPI_Datatype)0x4c000405), &offsets);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3000,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3001

ierr = DMRestoreWorkArray(dm, mesh->maxSupportSize, MPIU_INT((MPI_Datatype)0x4c000405), &join[1-i]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3001,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3002

3003

}

3004

3005

/*@C

3006

DMPlexGetMeet - Get an array for the meet of the set of points

3007

3008

Not Collective

3009

3010

Input Parameters:

3011

+ dm - The DMPlex object

3012

. numPoints - The number of input points for the meet

3013

- points - The input points

3014

3015

Output Parameters:

3016

+ numCoveredPoints - The number of points in the meet

3017

- coveredPoints - The points in the meet

3018

3019

Level: intermediate

3020

3021

Note: Currently, this is restricted to a single level meet

3022

3023

Fortran Notes:

3024

Since it returns an array, this routine is only available in Fortran 90, and you must

3025

include petsc.h90 in your code.

3026

3027

The numCoveredPoints argument is not present in the Fortran 90 binding since it is internal to the array.

3028

3029

.seealso: DMPlexRestoreMeet(), DMPlexGetJoin()

3030

@*/

3031

PetscErrorCode DMPlexGetMeet(DM dm, PetscInt numPoints, const PetscInt points[], PetscInt *numCoveringPoints, const PetscInt **coveringPoints)

3032

{

3033

DM_Plex *mesh = (DM_Plex*) dm->data;

3034

PetscInt *meet[2];

3035

PetscInt meetSize, i = 0;

3036

PetscInt dof, off, p, c, m;

3037

PetscErrorCode ierr;

3038

3039

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3039; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

3040

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),3040,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),3040,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),3040,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),3040,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

3041

PetscValidPointer(points, 2)do { if (!points) return PetscError(((MPI_Comm)0x44000001),3041
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",2); if
(!PetscCheckPointer(points,PETSC_CHAR)) return PetscError(((
MPI_Comm)0x44000001),3041,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",2);
} while (0);

3042

PetscValidPointer(numCoveringPoints, 3)do { if (!numCoveringPoints) return PetscError(((MPI_Comm)0x44000001
),3042,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(numCoveringPoints,PETSC_CHAR)) return PetscError
(((MPI_Comm)0x44000001),3042,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",3);
} while (0);

3043

PetscValidPointer(coveringPoints, 4)do { if (!coveringPoints) return PetscError(((MPI_Comm)0x44000001
),3043,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",4); if
(!PetscCheckPointer(coveringPoints,PETSC_CHAR)) return PetscError
(((MPI_Comm)0x44000001),3043,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",4);
} while (0);

3044

ierr = DMGetWorkArray(dm, mesh->maxConeSize, MPIU_INT((MPI_Datatype)0x4c000405), &meet[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3044,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3045

ierr = DMGetWorkArray(dm, mesh->maxConeSize, MPIU_INT((MPI_Datatype)0x4c000405), &meet[1]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3045,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3046

/* Copy in cone of first point */

3047

ierr = PetscSectionGetDof(mesh->coneSection, points[0], &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3047,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3048

ierr = PetscSectionGetOffset(mesh->coneSection, points[0], &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3048,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3049

for (meetSize = 0; meetSize < dof; ++meetSize) {

3050

meet[i][meetSize] = mesh->cones[off+meetSize];

3051

}

3052

/* Check each successive cone */

3053

for (p = 1; p < numPoints; ++p) {

3054

PetscInt newMeetSize = 0;

3055

3056

ierr = PetscSectionGetDof(mesh->coneSection, points[p], &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3056,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3057

ierr = PetscSectionGetOffset(mesh->coneSection, points[p], &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3057,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3058

for (c = 0; c < dof; ++c) {

3059

const PetscInt point = mesh->cones[off+c];

3060

3061

for (m = 0; m < meetSize; ++m) {

3062

if (point == meet[i][m]) {

3063

meet[1-i][newMeetSize++] = point;

3064

break;

3065

}

3066

}

3067

}

3068

meetSize = newMeetSize;

3069

i = 1-i;

3070

}

3071

*numCoveringPoints = meetSize;

3072

*coveringPoints = meet[i];

3073

ierr = DMRestoreWorkArray(dm, mesh->maxConeSize, MPIU_INT((MPI_Datatype)0x4c000405), &meet[1-i]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3073,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3074

3075

}

3076

3077

/*@C

3078

DMPlexRestoreMeet - Restore an array for the meet of the set of points

3079

3080

Not Collective

3081

3082

Input Parameters:

3083

+ dm - The DMPlex object

3084

. numPoints - The number of input points for the meet

3085

- points - The input points

3086

3087

Output Parameters:

3088

+ numCoveredPoints - The number of points in the meet

3089

- coveredPoints - The points in the meet

3090

3091

Level: intermediate

3092

3093

Fortran Notes:

3094

Since it returns an array, this routine is only available in Fortran 90, and you must

3095

include petsc.h90 in your code.

3096

3097

The numCoveredPoints argument is not present in the Fortran 90 binding since it is internal to the array.

3098

3099

.seealso: DMPlexGetMeet(), DMPlexGetFullMeet(), DMPlexGetJoin()

3100

@*/

3101

PetscErrorCode DMPlexRestoreMeet(DM dm, PetscInt numPoints, const PetscInt points[], PetscInt *numCoveredPoints, const PetscInt **coveredPoints)

3102

{

3103

PetscErrorCode ierr;

3104

3105

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3105; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

3106

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),3106,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),3106,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),3106,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),3106,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

3107

if (points) PetscValidIntPointer(points,3)do { if (!points) return PetscError(((MPI_Comm)0x44000001),3107
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(points,PETSC_INT)) return PetscError(((MPI_Comm
)0x44000001),3107,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer to Int: Parameter # %d"
,3); } while (0);

3108

if (numCoveredPoints) PetscValidIntPointer(numCoveredPoints,4)do { if (!numCoveredPoints) return PetscError(((MPI_Comm)0x44000001
),3108,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",4); if
(!PetscCheckPointer(numCoveredPoints,PETSC_INT)) return PetscError
(((MPI_Comm)0x44000001),3108,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer to Int: Parameter # %d"
,4); } while (0);

3109

PetscValidPointer(coveredPoints,5)do { if (!coveredPoints) return PetscError(((MPI_Comm)0x44000001
),3109,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",5); if
(!PetscCheckPointer(coveredPoints,PETSC_CHAR)) return PetscError
(((MPI_Comm)0x44000001),3109,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",5);
} while (0);

3110

ierr = DMRestoreWorkArray(dm, 0, MPIU_INT((MPI_Datatype)0x4c000405), (void*) coveredPoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3110,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3111

if (numCoveredPoints) *numCoveredPoints = 0;

3112

3113

}

3114

3115

/*@C

3116

DMPlexGetFullMeet - Get an array for the meet of the set of points

3117

3118

Not Collective

3119

3120

Input Parameters:

3121

+ dm - The DMPlex object

3122

. numPoints - The number of input points for the meet

3123

- points - The input points

3124

3125

Output Parameters:

3126

+ numCoveredPoints - The number of points in the meet

3127

- coveredPoints - The points in the meet

3128

3129

Level: intermediate

3130

3131

Fortran Notes:

3132

Since it returns an array, this routine is only available in Fortran 90, and you must

3133

include petsc.h90 in your code.

3134

3135

The numCoveredPoints argument is not present in the Fortran 90 binding since it is internal to the array.

3136

3137

.seealso: DMPlexGetMeet(), DMPlexRestoreMeet(), DMPlexGetJoin()

3138

@*/

3139

PetscErrorCode DMPlexGetFullMeet(DM dm, PetscInt numPoints, const PetscInt points[], PetscInt *numCoveredPoints, const PetscInt **coveredPoints)

3140

{

3141

DM_Plex *mesh = (DM_Plex*) dm->data;

3142

PetscInt *offsets, **closures;

3143

PetscInt *meet[2];

3144

PetscInt height = 0, maxSize, meetSize = 0, i = 0;

3145

PetscInt p, h, c, m, mc;

3146

PetscErrorCode ierr;

3147

3148

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3148; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

3149

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),3149,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),3149,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),3149,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),3149,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

3150

PetscValidPointer(points, 2)do { if (!points) return PetscError(((MPI_Comm)0x44000001),3150
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",2); if
(!PetscCheckPointer(points,PETSC_CHAR)) return PetscError(((
MPI_Comm)0x44000001),3150,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",2);
} while (0);

3151

PetscValidPointer(numCoveredPoints, 3)do { if (!numCoveredPoints) return PetscError(((MPI_Comm)0x44000001
),3151,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(numCoveredPoints,PETSC_CHAR)) return PetscError
(((MPI_Comm)0x44000001),3151,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",3);
} while (0);

3152

PetscValidPointer(coveredPoints, 4)do { if (!coveredPoints) return PetscError(((MPI_Comm)0x44000001
),3152,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",4); if
(!PetscCheckPointer(coveredPoints,PETSC_CHAR)) return PetscError
(((MPI_Comm)0x44000001),3152,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",4);
} while (0);

3153

3154

ierr = DMPlexGetDepth(dm, &height);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3154,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3155

ierr = PetscMalloc1(numPoints, &closures)PetscMallocA(1,PETSC_FALSE,3155,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(numPoints)*sizeof(**(&closures)),(&closures
));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3155,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3156

ierr = DMGetWorkArray(dm, numPoints*(height+2), MPIU_INT((MPI_Datatype)0x4c000405), &offsets);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3156,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3157

mc = mesh->maxConeSize;

3158

maxSize = (mc > 1) ? ((PetscPowInt(mc,height+1)-1)/(mc-1)) : height + 1;

3159

ierr = DMGetWorkArray(dm, maxSize, MPIU_INT((MPI_Datatype)0x4c000405), &meet[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3159,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3160

ierr = DMGetWorkArray(dm, maxSize, MPIU_INT((MPI_Datatype)0x4c000405), &meet[1]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3160,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3161

3162

for (p = 0; p < numPoints; ++p) {

3163

PetscInt closureSize;

3164

3165

ierr = DMPlexGetTransitiveClosure(dm, points[p], PETSC_TRUE, &closureSize, &closures[p]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3165,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3166

3167

offsets[p*(height+2)+0] = 0;

3168

for (h = 0; h < height+1; ++h) {

3169

PetscInt pStart, pEnd, i;

3170

3171

ierr = DMPlexGetHeightStratum(dm, h, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3171,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3172

for (i = offsets[p*(height+2)+h]; i < closureSize; ++i) {

3173

if ((pStart > closures[p][i*2]) || (pEnd <= closures[p][i*2])) {

3174

offsets[p*(height+2)+h+1] = i;

3175

break;

3176

}

3177

}

3178

if (i == closureSize) offsets[p*(height+2)+h+1] = i;

3179

}

3180

if (offsets[p*(height+2)+height+1] != closureSize) SETERRQ2(PetscObjectComm((PetscObject)dm), PETSC_ERR_PLIB, "Total size of closure %D should be %D", offsets[p*(height+2)+height+1], closureSize)return PetscError(PetscObjectComm((PetscObject)dm),3180,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",77,PETSC_ERROR_INITIAL
,"Total size of closure %D should be %D",offsets[p*(height+2)
+height+1],closureSize);

3181

}

3182

for (h = 0; h < height+1; ++h) {

3183

PetscInt dof;

3184

3185

/* Copy in cone of first point */

3186

dof = offsets[h+1] - offsets[h];

3187

for (meetSize = 0; meetSize < dof; ++meetSize) {

3188

meet[i][meetSize] = closures[0][(offsets[h]+meetSize)*2];

3189

}

3190

/* Check each successive cone */

3191

for (p = 1; p < numPoints && meetSize; ++p) {

3192

PetscInt newMeetSize = 0;

3193

3194

dof = offsets[p*(height+2)+h+1] - offsets[p*(height+2)+h];

3195

for (c = 0; c < dof; ++c) {

3196

const PetscInt point = closures[p][(offsets[p*(height+2)+h]+c)*2];

3197

3198

for (m = 0; m < meetSize; ++m) {

3199

if (point == meet[i][m]) {

3200

meet[1-i][newMeetSize++] = point;

3201

break;

3202

}

3203

}

3204

}

3205

meetSize = newMeetSize;

3206

i = 1-i;

3207

}

3208

if (meetSize) break;

3209

}

3210

*numCoveredPoints = meetSize;

3211

*coveredPoints = meet[i];

3212

for (p = 0; p < numPoints; ++p) {

3213

ierr = DMPlexRestoreTransitiveClosure(dm, points[p], PETSC_TRUE, NULL((void*)0), &closures[p]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3213,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3214

}

3215

ierr = PetscFree(closures)((*PetscTrFree)((void*)(closures),3215,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((closures) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3215,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3216

ierr = DMRestoreWorkArray(dm, numPoints*(height+2), MPIU_INT((MPI_Datatype)0x4c000405), &offsets);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3216,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3217

ierr = DMRestoreWorkArray(dm, mesh->maxConeSize, MPIU_INT((MPI_Datatype)0x4c000405), &meet[1-i]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3217,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3218

3219

}

3220

3221

/*@C

3222

DMPlexEqual - Determine if two DMs have the same topology

3223

3224

Not Collective

3225

3226

Input Parameters:

3227

+ dmA - A DMPlex object

3228

- dmB - A DMPlex object

3229

3230

Output Parameters:

3231

. equal - PETSC_TRUE if the topologies are identical

3232

3233

Level: intermediate

3234

3235

Notes:

3236

We are not solving graph isomorphism, so we do not permutation.

3237

3238

.seealso: DMPlexGetCone()

3239

@*/

3240

PetscErrorCode DMPlexEqual(DM dmA, DM dmB, PetscBool *equal)

3241

{

3242

PetscInt depth, depthB, pStart, pEnd, pStartB, pEndB, p;

3243

PetscErrorCode ierr;

3244

3245

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3245; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

3246

PetscValidHeaderSpecific(dmA, DM_CLASSID, 1)do { if (!dmA) return PetscError(((MPI_Comm)0x44000001),3246,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",1); if (
!PetscCheckPointer(dmA,PETSC_OBJECT)) return PetscError(((MPI_Comm
)0x44000001),3246,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dmA))->classid != DM_CLASSID) { if
(((PetscObject)(dmA))->classid == -1) return PetscError((
(MPI_Comm)0x44000001),3246,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),3246,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

3247

PetscValidHeaderSpecific(dmB, DM_CLASSID, 2)do { if (!dmB) return PetscError(((MPI_Comm)0x44000001),3247,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (
!PetscCheckPointer(dmB,PETSC_OBJECT)) return PetscError(((MPI_Comm
)0x44000001),3247,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(dmB))->classid != DM_CLASSID) { if
(((PetscObject)(dmB))->classid == -1) return PetscError((
(MPI_Comm)0x44000001),3247,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),3247,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",2); } } while (0);

3248

PetscValidPointer(equal, 3)do { if (!equal) return PetscError(((MPI_Comm)0x44000001),3248
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(equal,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),3248,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",3);
} while (0);

3249

3250

*equal = PETSC_FALSE;

3251

ierr = DMPlexGetDepth(dmA, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3251,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3252

ierr = DMPlexGetDepth(dmB, &depthB);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3252,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3253

if (depth != depthB) PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);

3254

ierr = DMPlexGetChart(dmA, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3254,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3255

ierr = DMPlexGetChart(dmB, &pStartB, &pEndB);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3255,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3256

if ((pStart != pStartB) || (pEnd != pEndB)) PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);

3257

for (p = pStart; p < pEnd; ++p) {

3258

const PetscInt *cone, *coneB, *ornt, *orntB, *support, *supportB;

3259

PetscInt coneSize, coneSizeB, c, supportSize, supportSizeB, s;

3260

3261

ierr = DMPlexGetConeSize(dmA, p, &coneSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3261,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3262

ierr = DMPlexGetCone(dmA, p, &cone);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3262,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3263

ierr = DMPlexGetConeOrientation(dmA, p, &ornt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3263,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3264

ierr = DMPlexGetConeSize(dmB, p, &coneSizeB);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3264,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3265

ierr = DMPlexGetCone(dmB, p, &coneB);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3265,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3266

ierr = DMPlexGetConeOrientation(dmB, p, &orntB);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3266,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3267

if (coneSize != coneSizeB) PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);

3268

for (c = 0; c < coneSize; ++c) {

3269

if (cone[c] != coneB[c]) PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);

3270

if (ornt[c] != orntB[c]) PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);

3271

}

3272

ierr = DMPlexGetSupportSize(dmA, p, &supportSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3272,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3273

ierr = DMPlexGetSupport(dmA, p, &support);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3273,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3274

ierr = DMPlexGetSupportSize(dmB, p, &supportSizeB);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3274,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3275

ierr = DMPlexGetSupport(dmB, p, &supportB);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3275,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3276

if (supportSize != supportSizeB) PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);

3277

for (s = 0; s < supportSize; ++s) {

3278

if (support[s] != supportB[s]) PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);

3279

}

3280

}

3281

*equal = PETSC_TRUE;

3282

3283

}

3284

3285

/*@C

3286

DMPlexGetNumFaceVertices - Returns the number of vertices on a face

3287

3288

Not Collective

3289

3290

Input Parameters:

3291

+ dm - The DMPlex

3292

. cellDim - The cell dimension

3293

- numCorners - The number of vertices on a cell

3294

3295

Output Parameters:

3296

. numFaceVertices - The number of vertices on a face

3297

3298

Level: developer

3299

3300

Notes:

3301

Of course this can only work for a restricted set of symmetric shapes

3302

3303

.seealso: DMPlexGetCone()

3304

@*/

3305

PetscErrorCode DMPlexGetNumFaceVertices(DM dm, PetscInt cellDim, PetscInt numCorners, PetscInt *numFaceVertices)

3306

{

3307

MPI_Comm comm;

3308

PetscErrorCode ierr;

3309

3310

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3310; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

3311

ierr = PetscObjectGetComm((PetscObject)dm,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3311,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3312

PetscValidPointer(numFaceVertices,3)do { if (!numFaceVertices) return PetscError(((MPI_Comm)0x44000001
),3312,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(numFaceVertices,PETSC_CHAR)) return PetscError
(((MPI_Comm)0x44000001),3312,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",3);
} while (0);

3313

switch (cellDim) {

3314

case 0:

3315

*numFaceVertices = 0;

3316

break;

3317

case 1:

3318

*numFaceVertices = 1;

3319

break;

3320

case 2:

3321

switch (numCorners) {

3322

case 3: /* triangle */

3323

*numFaceVertices = 2; /* Edge has 2 vertices */

3324

break;

3325

case 4: /* quadrilateral */

3326

*numFaceVertices = 2; /* Edge has 2 vertices */

3327

break;

3328

case 6: /* quadratic triangle, tri and quad cohesive Lagrange cells */

3329

*numFaceVertices = 3; /* Edge has 3 vertices */

3330

break;

3331

case 9: /* quadratic quadrilateral, quadratic quad cohesive Lagrange cells */

3332

*numFaceVertices = 3; /* Edge has 3 vertices */

3333

break;

3334

default:

3335

SETERRQ2(comm, PETSC_ERR_ARG_OUTOFRANGE, "Invalid number of face corners %D for dimension %D", numCorners, cellDim)return PetscError(comm,3335,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,63,PETSC_ERROR_INITIAL,"Invalid number of face corners %D for dimension %D"
,numCorners,cellDim);

3336

}

3337

break;

3338

case 3:

3339

switch (numCorners) {

3340

case 4: /* tetradehdron */

3341

*numFaceVertices = 3; /* Face has 3 vertices */

3342

break;

3343

case 6: /* tet cohesive cells */

3344

*numFaceVertices = 4; /* Face has 4 vertices */

3345

break;

3346

case 8: /* hexahedron */

3347

*numFaceVertices = 4; /* Face has 4 vertices */

3348

break;

3349

case 9: /* tet cohesive Lagrange cells */

3350

*numFaceVertices = 6; /* Face has 6 vertices */

3351

break;

3352

case 10: /* quadratic tetrahedron */

3353

*numFaceVertices = 6; /* Face has 6 vertices */

3354

break;

3355

case 12: /* hex cohesive Lagrange cells */

3356

*numFaceVertices = 6; /* Face has 6 vertices */

3357

break;

3358

case 18: /* quadratic tet cohesive Lagrange cells */

3359

*numFaceVertices = 6; /* Face has 6 vertices */

3360

break;

3361

case 27: /* quadratic hexahedron, quadratic hex cohesive Lagrange cells */

3362

*numFaceVertices = 9; /* Face has 9 vertices */

3363

break;

3364

default:

3365

SETERRQ2(comm, PETSC_ERR_ARG_OUTOFRANGE, "Invalid number of face corners %D for dimension %D", numCorners, cellDim)return PetscError(comm,3365,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,63,PETSC_ERROR_INITIAL,"Invalid number of face corners %D for dimension %D"
,numCorners,cellDim);

3366

}

3367

break;

3368

default:

3369

SETERRQ1(comm, PETSC_ERR_ARG_OUTOFRANGE, "Invalid cell dimension %D", cellDim)return PetscError(comm,3369,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,63,PETSC_ERROR_INITIAL,"Invalid cell dimension %D",cellDim);

3370

}

3371

3372

}

3373

3374

/*@

3375

DMPlexGetDepthLabel - Get the DMLabel recording the depth of each point

3376

3377

Not Collective

3378

3379

Input Parameter:

3380

. dm - The DMPlex object

3381

3382

Output Parameter:

3383

. depthLabel - The DMLabel recording point depth

3384

3385

Level: developer

3386

3387

.seealso: DMPlexGetDepth(), DMPlexGetHeightStratum(), DMPlexGetDepthStratum()

3388

@*/

3389

PetscErrorCode DMPlexGetDepthLabel(DM dm, DMLabel *depthLabel)

3390

{

3391

PetscErrorCode ierr;

3392

3393

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3393; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

3394

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),3394,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),3394,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),3394,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),3394,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

3395

PetscValidPointer(depthLabel, 2)do { if (!depthLabel) return PetscError(((MPI_Comm)0x44000001
),3395,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",2); if
(!PetscCheckPointer(depthLabel,PETSC_CHAR)) return PetscError
(((MPI_Comm)0x44000001),3395,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",2);
} while (0);

3396

if (!dm->depthLabel) {ierr = DMGetLabel(dm, "depth", &dm->depthLabel);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3396,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

3397

*depthLabel = dm->depthLabel;

3398

3399

}

3400

3401

/*@

3402

DMPlexGetDepth - Get the depth of the DAG representing this mesh

3403

3404

Not Collective

3405

3406

Input Parameter:

3407

. dm - The DMPlex object

3408

3409

Output Parameter:

3410

. depth - The number of strata (breadth first levels) in the DAG

3411

3412

Level: developer

3413

3414

.seealso: DMPlexGetDepthLabel(), DMPlexGetHeightStratum(), DMPlexGetDepthStratum()

3415

@*/

3416

PetscErrorCode DMPlexGetDepth(DM dm, PetscInt *depth)

3417

{

3418

DMLabel label;

3419

PetscInt d = 0;

3420

PetscErrorCode ierr;

3421

3422

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3422; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

3423

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),3423,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),3423,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),3423,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),3423,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

3424

PetscValidPointer(depth, 2)do { if (!depth) return PetscError(((MPI_Comm)0x44000001),3424
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",2); if
(!PetscCheckPointer(depth,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),3424,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",2);
} while (0);

3425

ierr = DMPlexGetDepthLabel(dm, &label);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3425,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3426

if (label) {ierr = DMLabelGetNumValues(label, &d);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3426,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

3427

*depth = d-1;

3428

3429

}

3430

3431

/*@

3432

DMPlexGetDepthStratum - Get the bounds [start, end) for all points at a certain depth.

3433

3434

Not Collective

3435

3436

Input Parameters:

3437

+ dm - The DMPlex object

3438

- stratumValue - The requested depth

3439

3440

Output Parameters:

3441

+ start - The first point at this depth

3442

- end - One beyond the last point at this depth

3443

3444

Notes:

3445

Depth indexing is related to topological dimension. Depth stratum 0 contains the lowest topological dimension points,

3446

often "vertices". If the mesh is "interpolated" (see DMPlexInterpolate()), then depth stratum 1 contains the next

3447

higher dimension, e.g., "edges".

3448

3449

Level: developer

3450

3451

.seealso: DMPlexGetHeightStratum(), DMPlexGetDepth()

3452

@*/

3453

PetscErrorCode DMPlexGetDepthStratum(DM dm, PetscInt stratumValue, PetscInt *start, PetscInt *end)

3454

{

3455

DMLabel label;

3456

PetscInt pStart, pEnd;

3457

PetscErrorCode ierr;

3458

3459

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3459; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

3460

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),3460,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),3460,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),3460,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),3460,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

3461

if (start) {PetscValidPointer(start, 3)do { if (!start) return PetscError(((MPI_Comm)0x44000001),3461
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(start,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),3461,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",3);
} while (0); *start = 0;}

3462

if (end) {PetscValidPointer(end, 4)do { if (!end) return PetscError(((MPI_Comm)0x44000001),3462,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",4); if
(!PetscCheckPointer(end,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),3462,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",4);
} while (0); *end = 0;}

3463

ierr = DMPlexGetChart(dm, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3463,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3464

if (pStart == pEnd) PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);

3465

if (stratumValue < 0) {

3466

if (start) *start = pStart;

3467

if (end) *end = pEnd;

3468

3469

}

3470

ierr = DMPlexGetDepthLabel(dm, &label);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3470,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3471

if (!label) SETERRQ(PetscObjectComm((PetscObject) dm), PETSC_ERR_ARG_WRONG, "No label named depth was found")return PetscError(PetscObjectComm((PetscObject) dm),3471,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"No label named depth was found");

3472

ierr = DMLabelGetStratumBounds(label, stratumValue, start, end);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3472,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3473

3474

}

3475

3476

/*@

3477

DMPlexGetHeightStratum - Get the bounds [start, end) for all points at a certain height.

3478

3479

Not Collective

3480

3481

Input Parameters:

3482

+ dm - The DMPlex object

3483

- stratumValue - The requested height

3484

3485

Output Parameters:

3486

+ start - The first point at this height

3487

- end - One beyond the last point at this height

3488

3489

Notes:

3490

Height indexing is related to topological codimension. Height stratum 0 contains the highest topological dimension

3491

points, often called "cells" or "elements". If the mesh is "interpolated" (see DMPlexInterpolate()), then height

3492

stratum 1 contains the boundary of these "cells", often called "faces" or "facets".

3493

3494

Level: developer

3495

3496

.seealso: DMPlexGetDepthStratum(), DMPlexGetDepth()

3497

@*/

3498

PetscErrorCode DMPlexGetHeightStratum(DM dm, PetscInt stratumValue, PetscInt *start, PetscInt *end)

3499

{

3500

DMLabel label;

3501

PetscInt depth, pStart, pEnd;

3502

PetscErrorCode ierr;

3503

3504

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3504; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

3505

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),3505,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),3505,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),3505,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),3505,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

3506

if (start) {PetscValidPointer(start, 3)do { if (!start) return PetscError(((MPI_Comm)0x44000001),3506
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(start,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),3506,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",3);
} while (0); *start = 0;}

3507

if (end) {PetscValidPointer(end, 4)do { if (!end) return PetscError(((MPI_Comm)0x44000001),3507,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",4); if
(!PetscCheckPointer(end,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),3507,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",4);
} while (0); *end = 0;}

3508

ierr = DMPlexGetChart(dm, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3508,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3509

3510

if (stratumValue < 0) {

3511

if (start) *start = pStart;

3512

if (end) *end = pEnd;

3513

3514

}

3515

ierr = DMPlexGetDepthLabel(dm, &label);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3515,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3516

if (!label) SETERRQ(PetscObjectComm((PetscObject) dm), PETSC_ERR_ARG_WRONG, "No label named depth was found")return PetscError(PetscObjectComm((PetscObject) dm),3516,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"No label named depth was found");

3517

ierr = DMLabelGetNumValues(label, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3517,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3518

ierr = DMLabelGetStratumBounds(label, depth-1-stratumValue, start, end);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3518,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3519

3520

}

3521

3522

PetscErrorCode DMCreateCoordinateDM_Plex(DM dm, DM *cdm)

3523

{

3524

PetscSection section, s;

3525

Mat m;

3526

PetscInt maxHeight;

3527

PetscErrorCode ierr;

3528

3529

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3529; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

3530

ierr = DMClone(dm, cdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3530,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3531

ierr = DMPlexGetMaxProjectionHeight(dm, &maxHeight);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3531,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3532

ierr = DMPlexSetMaxProjectionHeight(*cdm, maxHeight);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3532,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3533

ierr = PetscSectionCreate(PetscObjectComm((PetscObject)dm), &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3533,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3534

ierr = DMSetSection(*cdm, section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3534,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3535

ierr = PetscSectionDestroy(&section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3535,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3536

ierr = PetscSectionCreate(PETSC_COMM_SELF((MPI_Comm)0x44000001), &s);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3536,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3537

ierr = MatCreate(PETSC_COMM_SELF((MPI_Comm)0x44000001), &m);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3537,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3538

ierr = DMSetDefaultConstraints(*cdm, s, m);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3538,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3539

ierr = PetscSectionDestroy(&s);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3539,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3540

ierr = MatDestroy(&m);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3540,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3541

3542

ierr = DMSetNumFields(*cdm, 1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3542,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3543

ierr = DMCreateDS(*cdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3543,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3544

3545

}

3546

3547

PetscErrorCode DMCreateCoordinateField_Plex(DM dm, DMField *field)

3548

{

3549

Vec coordsLocal;

3550

DM coordsDM;

3551

PetscErrorCode ierr;

3552

3553

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3553; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

3554

*field = NULL((void*)0);

3555

ierr = DMGetCoordinatesLocal(dm,&coordsLocal);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3555,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3556

ierr = DMGetCoordinateDM(dm,&coordsDM);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3556,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3557

if (coordsLocal && coordsDM) {

3558

ierr = DMFieldCreateDS(coordsDM, 0, coordsLocal, field);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3558,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3559

}

3560

3561

}

3562

3563

/*@C

3564

DMPlexGetConeSection - Return a section which describes the layout of cone data

3565

3566

Not Collective

3567

3568

Input Parameters:

3569

. dm - The DMPlex object

3570

3571

Output Parameter:

3572

. section - The PetscSection object

3573

3574

Level: developer

3575

3576

.seealso: DMPlexGetSupportSection(), DMPlexGetCones(), DMPlexGetConeOrientations()

3577

@*/

3578

PetscErrorCode DMPlexGetConeSection(DM dm, PetscSection *section)

3579

{

3580

DM_Plex *mesh = (DM_Plex*) dm->data;

3581

3582

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3582; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

3583

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),3583,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),3583,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),3583,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),3583,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

3584

if (section) *section = mesh->coneSection;

3585

3586

}

3587

3588

/*@C

3589

DMPlexGetSupportSection - Return a section which describes the layout of support data

3590

3591

Not Collective

3592

3593

Input Parameters:

3594

. dm - The DMPlex object

3595

3596

Output Parameter:

3597

. section - The PetscSection object

3598

3599

Level: developer

3600

3601

.seealso: DMPlexGetConeSection()

3602

@*/

3603

PetscErrorCode DMPlexGetSupportSection(DM dm, PetscSection *section)

3604

{

3605

DM_Plex *mesh = (DM_Plex*) dm->data;

3606

3607

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3607; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

3608

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),3608,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),3608,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),3608,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),3608,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

3609

if (section) *section = mesh->supportSection;

3610

3611

}

3612

3613

/*@C

3614

DMPlexGetCones - Return cone data

3615

3616

Not Collective

3617

3618

Input Parameters:

3619

. dm - The DMPlex object

3620

3621

Output Parameter:

3622

. cones - The cone for each point

3623

3624

Level: developer

3625

3626

.seealso: DMPlexGetConeSection()

3627

@*/

3628

PetscErrorCode DMPlexGetCones(DM dm, PetscInt *cones[])

3629

{

3630

DM_Plex *mesh = (DM_Plex*) dm->data;

3631

3632

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3632; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

3633

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),3633,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),3633,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),3633,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),3633,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

3634

if (cones) *cones = mesh->cones;

3635

3636

}

3637

3638

/*@C

3639

DMPlexGetConeOrientations - Return cone orientation data

3640

3641

Not Collective

3642

3643

Input Parameters:

3644

. dm - The DMPlex object

3645

3646

Output Parameter:

3647

. coneOrientations - The cone orientation for each point

3648

3649

Level: developer

3650

3651

.seealso: DMPlexGetConeSection()

3652

@*/

3653

PetscErrorCode DMPlexGetConeOrientations(DM dm, PetscInt *coneOrientations[])

3654

{

3655

DM_Plex *mesh = (DM_Plex*) dm->data;

3656

3657

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3657; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

3658

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),3658,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),3658,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),3658,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),3658,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

3659

if (coneOrientations) *coneOrientations = mesh->coneOrientations;

3660

3661

}

3662

3663

/******************************** FEM Support **********************************/

3664

3665

3666

Returns number of components and tensor degree for the field. For interpolated meshes, line should be a point

3667

representing a line in the section.

3668

3669

static PetscErrorCode PetscSectionFieldGetTensorDegree_Private(PetscSection section,PetscInt field,PetscInt line,PetscBool vertexchart,PetscInt *Nc,PetscInt *k)

3670

{

3671

PetscErrorCode ierr;

3672

3673

PetscFunctionBeginHotdo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3673; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_TRUE || petscstack->hotdepth); } ; } while (0);
; } while (0);

3674

ierr = PetscSectionGetFieldComponents(section, field, Nc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3674,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3675

if (vertexchart) { /* If we only have a vertex chart, we must have degree k=1 */

3676

*k = 1;

3677

} else { /* Assume the full interpolated mesh is in the chart; lines in particular */

3678

/* An order k SEM disc has k-1 dofs on an edge */

3679

ierr = PetscSectionGetFieldDof(section, line, field, k);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3679,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3680

*k = *k / *Nc + 1;

3681

}

3682

3683

}

3684

3685

/*@

3686

3687

DMPlexSetClosurePermutationTensor - Create a permutation from the default (BFS) point ordering in the closure, to a

3688

lexicographic ordering over the tensor product cell (i.e., line, quad, hex, etc.), and set this permutation in the

3689

section provided (or default section of the DM).

3690

3691

Input Parameters:

3692

+ dm - The DM

3693

. point - Either a cell (highest dim point) or an edge (dim 1 point), or PETSC_DETERMINE

3694

- section - The PetscSection to reorder, or NULL for the default section

3695

3696

Note: The point is used to determine the number of dofs/field on an edge. For SEM, this is related to the polynomial

3697

degree of the basis.

3698

3699

Example:

3700

A typical interpolated single-quad mesh might order points as

3701

.vb

3702

[c0, v1, v2, v3, v4, e5, e6, e7, e8]

3703

3704

v4 -- e6 -- v3

3705

| |

3706

e7 c0 e8

3707

| |

3708

v1 -- e5 -- v2

3709

.ve

3710

3711

(There is no significance to the ordering described here.) The default section for a Q3 quad might typically assign

3712

dofs in the order of points, e.g.,

3713

.vb

3714

c0 -> [0,1,2,3]

3715

v1 -> [4]

3716

...

3717

e5 -> [8, 9]

3718

.ve

3719

3720

which corresponds to the dofs

3721

.vb

3722

6 10 11 7

3723

13 2 3 15

3724

12 0 1 14

3725

4 8 9 5

3726

.ve

3727

3728

The closure in BFS ordering works through height strata (cells, edges, vertices) to produce the ordering

3729

.vb

3730

0 1 2 3 8 9 14 15 11 10 13 12 4 5 7 6

3731

.ve

3732

3733

After calling DMPlexSetClosurePermutationTensor(), the closure will be ordered lexicographically,

3734

.vb

3735

4 8 9 5 12 0 1 14 13 2 3 15 6 10 11 7

3736

.ve

3737

3738

Level: developer

3739

3740

.seealso: DMGetSection(), PetscSectionSetClosurePermutation()

3741

@*/

3742

PetscErrorCode DMPlexSetClosurePermutationTensor(DM dm, PetscInt point, PetscSection section)

3743

{

3744

DMLabel label;

3745

PetscInt *perm;

3746

PetscInt dim, depth, eStart, k, Nf, f, Nc, c, i, j, size = 0, offset = 0, foffset = 0;

3747

PetscBool vertexchart;

3748

PetscErrorCode ierr;

3749

3750

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3750; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

3751

if (point < 0) {ierr = DMPlexGetDepthStratum(dm, 1, &point, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3751,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

3752

ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3752,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3753

ierr = DMPlexGetDepthLabel(dm, &label);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3753,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3754

ierr = DMLabelGetValue(label, point, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3754,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3755

if (depth == 1) {eStart = point;}

3756

else if (depth == dim) {

3757

const PetscInt *cone;

3758

3759

ierr = DMPlexGetCone(dm, point, &cone);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3759,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3760

if (dim == 2) eStart = cone[0];

3761

else if (dim == 3) {

3762

const PetscInt *cone2;

3763

ierr = DMPlexGetCone(dm, cone[0], &cone2);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3763,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3764

eStart = cone2[0];

3765

} else SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Point %D of depth %D cannot be used to bootstrap spectral ordering for dim %D", point, depth, dim)return PetscError(((MPI_Comm)0x44000001),3765,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,62,PETSC_ERROR_INITIAL,"Point %D of depth %D cannot be used to bootstrap spectral ordering for dim %D"
,point,depth,dim);

3766

} else SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Point %D of depth %D cannot be used to bootstrap spectral ordering for dim %D", point, depth, dim)return PetscError(((MPI_Comm)0x44000001),3766,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,62,PETSC_ERROR_INITIAL,"Point %D of depth %D cannot be used to bootstrap spectral ordering for dim %D"
,point,depth,dim);

3767

if (!section) {ierr = DMGetSection(dm, &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3767,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

3768

{ /* Determine whether the chart covers all points or just vertices. */

3769

PetscInt pStart,pEnd,cStart,cEnd;

3770

ierr = DMPlexGetDepthStratum(dm,0,&pStart,&pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3770,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3771

ierr = PetscSectionGetChart(section,&cStart,&cEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3771,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3772

if (pStart == cStart && pEnd == cEnd) vertexchart = PETSC_TRUE; /* Just vertices */

3773

else vertexchart = PETSC_FALSE; /* Assume all interpolated points are in chart */

3774

}

3775

ierr = PetscSectionGetNumFields(section, &Nf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3775,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3776

if (dim < 1) PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize
> 0) { petscstack->currentsize--; petscstack->function
[petscstack->currentsize] = 0; petscstack->file[petscstack
->currentsize] = 0; petscstack->line[petscstack->currentsize
] = 0; petscstack->petscroutine[petscstack->currentsize
] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth =
(((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack->
hotdepth-1)); } ; } while (0); return(0);} while (0);

3777

for (f = 0; f < Nf; ++f) {

3778

ierr = PetscSectionFieldGetTensorDegree_Private(section,f,eStart,vertexchart,&Nc,&k);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3778,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3779

size += PetscPowInt(k+1, dim)*Nc;

3780

}

3781

ierr = PetscMalloc1(size, &perm)PetscMallocA(1,PETSC_FALSE,3781,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(size)*sizeof(**(&perm)),(&perm));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3781,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3782

for (f = 0; f < Nf; ++f) {

3783

switch (dim) {

3784

case 1:

3785

ierr = PetscSectionFieldGetTensorDegree_Private(section,f,eStart,vertexchart,&Nc,&k);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3785,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3786

3787

Original ordering is [ edge of length k-1; vtx0; vtx1 ]

3788

We want [ vtx0; edge of length k-1; vtx1 ]

3789

3790

for (c=0; c<Nc; c++,offset++) perm[offset] = (k-1)*Nc + c + foffset;

3791

for (i=0; i<k-1; i++) for (c=0; c<Nc; c++,offset++) perm[offset] = i*Nc + c + foffset;

3792

for (c=0; c<Nc; c++,offset++) perm[offset] = k*Nc + c + foffset;

3793

foffset = offset;

3794

break;

3795

case 2:

3796

/* The original quad closure is oriented clockwise, {f, e_b, e_r, e_t, e_l, v_lb, v_rb, v_tr, v_tl} */

3797

ierr = PetscSectionFieldGetTensorDegree_Private(section,f,eStart,vertexchart,&Nc,&k);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3797,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3798

/* The SEM order is

3799

3800

v_lb, {e_b}, v_rb,

3801

e^{(k-1)-i}_l, {f^{i*(k-1)}}, e^i_r,

3802

v_lt, reverse {e_t}, v_rt

3803

3804

{

3805

const PetscInt of = 0;

3806

const PetscInt oeb = of + PetscSqr(k-1)((k-1)*(k-1));

3807

const PetscInt oer = oeb + (k-1);

3808

const PetscInt oet = oer + (k-1);

3809

const PetscInt oel = oet + (k-1);

3810

const PetscInt ovlb = oel + (k-1);

3811

const PetscInt ovrb = ovlb + 1;

3812

const PetscInt ovrt = ovrb + 1;

3813

const PetscInt ovlt = ovrt + 1;

3814

PetscInt o;

3815

3816

/* bottom */

3817

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = ovlb*Nc + c + foffset;

3818

for (o = oeb; o < oer; ++o) for (c = 0; c < Nc; ++c, ++offset) perm[offset] = o*Nc + c + foffset;

3819

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = ovrb*Nc + c + foffset;

3820

/* middle */

3821

for (i = 0; i < k-1; ++i) {

3822

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = (oel+(k-2)-i)*Nc + c + foffset;

3823

for (o = of+(k-1)*i; o < of+(k-1)*(i+1); ++o) for (c = 0; c < Nc; ++c, ++offset) perm[offset] = o*Nc + c + foffset;

3824

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = (oer+i)*Nc + c + foffset;

3825

}

3826

/* top */

3827

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = ovlt*Nc + c + foffset;

3828

for (o = oel-1; o >= oet; --o) for (c = 0; c < Nc; ++c, ++offset) perm[offset] = o*Nc + c + foffset;

3829

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = ovrt*Nc + c + foffset;

3830

foffset = offset;

3831

}

3832

break;

3833

case 3:

3834

/* The original hex closure is

3835

3836

{c,

3837

f_b, f_t, f_f, f_b, f_r, f_l,

3838

e_bl, e_bb, e_br, e_bf, e_tf, e_tr, e_tb, e_tl, e_rf, e_lf, e_lb, e_rb,

3839

v_blf, v_blb, v_brb, v_brf, v_tlf, v_trf, v_trb, v_tlb}

3840

3841

ierr = PetscSectionFieldGetTensorDegree_Private(section,f,eStart,vertexchart,&Nc,&k);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3841,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3842

/* The SEM order is

3843

Bottom Slice

3844

v_blf, {e^{(k-1)-n}_bf}, v_brf,

3845

e^{i}_bl, f^{n*(k-1)+(k-1)-i}_b, e^{(k-1)-i}_br,

3846

v_blb, {e_bb}, v_brb,

3847

3848

Middle Slice (j)

3849

{e^{(k-1)-j}_lf}, {f^{j*(k-1)+n}_f}, e^j_rf,

3850

f^{i*(k-1)+j}_l, {c^{(j*(k-1) + i)*(k-1)+n}_t}, f^{j*(k-1)+i}_r,

3851

e^j_lb, {f^{j*(k-1)+(k-1)-n}_b}, e^{(k-1)-j}_rb,

3852

3853

Top Slice

3854

v_tlf, {e_tf}, v_trf,

3855

e^{(k-1)-i}_tl, {f^{i*(k-1)}_t}, e^{i}_tr,

3856

v_tlb, {e^{(k-1)-n}_tb}, v_trb,

3857

3858

{

3859

const PetscInt oc = 0;

3860

const PetscInt ofb = oc + PetscSqr(k-1)((k-1)*(k-1))*(k-1);

3861

const PetscInt oft = ofb + PetscSqr(k-1)((k-1)*(k-1));

3862

const PetscInt off = oft + PetscSqr(k-1)((k-1)*(k-1));

3863

const PetscInt ofk = off + PetscSqr(k-1)((k-1)*(k-1));

3864

const PetscInt ofr = ofk + PetscSqr(k-1)((k-1)*(k-1));

3865

const PetscInt ofl = ofr + PetscSqr(k-1)((k-1)*(k-1));

3866

const PetscInt oebl = ofl + PetscSqr(k-1)((k-1)*(k-1));

3867

const PetscInt oebb = oebl + (k-1);

3868

const PetscInt oebr = oebb + (k-1);

3869

const PetscInt oebf = oebr + (k-1);

3870

const PetscInt oetf = oebf + (k-1);

3871

const PetscInt oetr = oetf + (k-1);

3872

const PetscInt oetb = oetr + (k-1);

3873

const PetscInt oetl = oetb + (k-1);

3874

const PetscInt oerf = oetl + (k-1);

3875

const PetscInt oelf = oerf + (k-1);

3876

const PetscInt oelb = oelf + (k-1);

3877

const PetscInt oerb = oelb + (k-1);

3878

const PetscInt ovblf = oerb + (k-1);

3879

const PetscInt ovblb = ovblf + 1;

3880

const PetscInt ovbrb = ovblb + 1;

3881

const PetscInt ovbrf = ovbrb + 1;

3882

const PetscInt ovtlf = ovbrf + 1;

3883

const PetscInt ovtrf = ovtlf + 1;

3884

const PetscInt ovtrb = ovtrf + 1;

3885

const PetscInt ovtlb = ovtrb + 1;

3886

PetscInt o, n;

3887

3888

/* Bottom Slice */

3889

/* bottom */

3890

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = ovblf*Nc + c + foffset;

3891

for (o = oetf-1; o >= oebf; --o) for (c = 0; c < Nc; ++c, ++offset) perm[offset] = o*Nc + c + foffset;

3892

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = ovbrf*Nc + c + foffset;

3893

/* middle */

3894

for (i = 0; i < k-1; ++i) {

3895

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = (oebl+i)*Nc + c + foffset;

3896

for (n = 0; n < k-1; ++n) {o = ofb+n*(k-1)+i; for (c = 0; c < Nc; ++c, ++offset) perm[offset] = o*Nc + c + foffset;}

3897

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = (oebr+(k-2)-i)*Nc + c + foffset;

3898

}

3899

/* top */

3900

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = ovblb*Nc + c + foffset;

3901

for (o = oebb; o < oebr; ++o) for (c = 0; c < Nc; ++c, ++offset) perm[offset] = o*Nc + c + foffset;

3902

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = ovbrb*Nc + c + foffset;

3903

3904

/* Middle Slice */

3905

for (j = 0; j < k-1; ++j) {

3906

/* bottom */

3907

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = (oelf+(k-2)-j)*Nc + c + foffset;

3908

for (o = off+j*(k-1); o < off+(j+1)*(k-1); ++o) for (c = 0; c < Nc; ++c, ++offset) perm[offset] = o*Nc + c + foffset;

3909

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = (oerf+j)*Nc + c + foffset;

3910

/* middle */

3911

for (i = 0; i < k-1; ++i) {

3912

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = (ofl+i*(k-1)+j)*Nc + c + foffset;

3913

for (n = 0; n < k-1; ++n) for (c = 0; c < Nc; ++c, ++offset) perm[offset] = (oc+(j*(k-1)+i)*(k-1)+n)*Nc + c + foffset;

3914

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = (ofr+j*(k-1)+i)*Nc + c + foffset;

3915

}

3916

/* top */

3917

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = (oelb+j)*Nc + c + foffset;

3918

for (o = ofk+j*(k-1)+(k-2); o >= ofk+j*(k-1); --o) for (c = 0; c < Nc; ++c, ++offset) perm[offset] = o*Nc + c + foffset;

3919

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = (oerb+(k-2)-j)*Nc + c + foffset;

3920

}

3921

3922

/* Top Slice */

3923

/* bottom */

3924

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = ovtlf*Nc + c + foffset;

3925

for (o = oetf; o < oetr; ++o) for (c = 0; c < Nc; ++c, ++offset) perm[offset] = o*Nc + c + foffset;

3926

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = ovtrf*Nc + c + foffset;

3927

/* middle */

3928

for (i = 0; i < k-1; ++i) {

3929

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = (oetl+(k-2)-i)*Nc + c + foffset;

3930

for (n = 0; n < k-1; ++n) for (c = 0; c < Nc; ++c, ++offset) perm[offset] = (oft+i*(k-1)+n)*Nc + c + foffset;

3931

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = (oetr+i)*Nc + c + foffset;

3932

}

3933

/* top */

3934

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = ovtlb*Nc + c + foffset;

3935

for (o = oetl-1; o >= oetb; --o) for (c = 0; c < Nc; ++c, ++offset) perm[offset] = o*Nc + c + foffset;

3936

for (c = 0; c < Nc; ++c, ++offset) perm[offset] = ovtrb*Nc + c + foffset;

3937

3938

foffset = offset;

3939

}

3940

break;

3941

default: SETERRQ1(PetscObjectComm((PetscObject) dm), PETSC_ERR_ARG_OUTOFRANGE, "No spectral ordering for dimension %D", dim)return PetscError(PetscObjectComm((PetscObject) dm),3941,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"No spectral ordering for dimension %D",dim);

3942

}

3943

}

3944

if (offset != size) SETERRQ2(PetscObjectComm((PetscObject) dm), PETSC_ERR_PLIB, "Number of permutation entries %D != %D", offset, size)return PetscError(PetscObjectComm((PetscObject) dm),3944,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",77,PETSC_ERROR_INITIAL
,"Number of permutation entries %D != %D",offset,size);

3945

/* Check permutation */

3946

{

3947

PetscInt *check;

3948

3949

ierr = PetscMalloc1(size, &check)PetscMallocA(1,PETSC_FALSE,3949,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(size)*sizeof(**(&check)),(&check));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3949,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3950

for (i = 0; i < size; ++i) {check[i] = -1; if (perm[i] < 0 || perm[i] >= size) SETERRQ2(PetscObjectComm((PetscObject) dm), PETSC_ERR_PLIB, "Invalid permutation index p[%D] = %D", i, perm[i])return PetscError(PetscObjectComm((PetscObject) dm),3950,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",77,PETSC_ERROR_INITIAL
,"Invalid permutation index p[%D] = %D",i,perm[i]);}

3951

for (i = 0; i < size; ++i) check[perm[i]] = i;

3952

for (i = 0; i < size; ++i) {if (check[i] < 0) SETERRQ1(PetscObjectComm((PetscObject) dm), PETSC_ERR_PLIB, "Missing permutation index %D", i)return PetscError(PetscObjectComm((PetscObject) dm),3952,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",77,PETSC_ERROR_INITIAL
,"Missing permutation index %D",i);}

3953

ierr = PetscFree(check)((*PetscTrFree)((void*)(check),3953,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((check) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3953,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3954

}

3955

ierr = PetscSectionSetClosurePermutation_Internal(section, (PetscObject) dm, size, PETSC_OWN_POINTER, perm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3955,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3956

3957

}

3958

3959

PetscErrorCode DMPlexGetPointDualSpaceFEM(DM dm, PetscInt point, PetscInt field, PetscDualSpace *dspace)

3960

{

3961

PetscDS prob;

3962

PetscInt depth, Nf, h;

3963

DMLabel label;

3964

PetscErrorCode ierr;

3965

3966

PetscFunctionBeginHotdo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3966; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_TRUE || petscstack->hotdepth); } ; } while (0);
; } while (0);

3967

ierr = DMGetDS(dm, &prob);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3967,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3968

Nf = prob->Nf;

3969

label = dm->depthLabel;

3970

*dspace = NULL((void*)0);

3971

if (field < Nf) {

3972

PetscObject disc = prob->disc[field];

3973

3974

if (disc->classid == PETSCFE_CLASSID) {

3975

PetscDualSpace dsp;

3976

3977

ierr = PetscFEGetDualSpace((PetscFE)disc,&dsp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3977,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3978

ierr = DMLabelGetNumValues(label,&depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3978,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3979

ierr = DMLabelGetValue(label,point,&h);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3979,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3980

h = depth - 1 - h;

3981

if (h) {

3982

ierr = PetscDualSpaceGetHeightSubspace(dsp,h,dspace);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),3982,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

3983

} else {

3984

*dspace = dsp;

3985

}

3986

}

3987

}

3988

3989

}

3990

3991

3992

PETSC_STATIC_INLINEstatic inline PetscErrorCode DMPlexVecGetClosure_Depth1_Static(DM dm, PetscSection section, Vec v, PetscInt point, PetscInt *csize, PetscScalar *values[])

3993

{

3994

PetscScalar *array, *vArray;

3995

const PetscInt *cone, *coneO;

3996

PetscInt pStart, pEnd, p, numPoints, size = 0, offset = 0;

3997

PetscErrorCode ierr;

3998

3999

PetscFunctionBeginHotdo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 3999; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_TRUE || petscstack->hotdepth); } ; } while (0);
; } while (0);

4000

ierr = PetscSectionGetChart(section, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4000,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4001

ierr = DMPlexGetConeSize(dm, point, &numPoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4001,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4002

ierr = DMPlexGetCone(dm, point, &cone);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4002,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4003

ierr = DMPlexGetConeOrientation(dm, point, &coneO);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4003,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4004

if (!values || !*values) {

4005

if ((point >= pStart) && (point < pEnd)) {

4006

PetscInt dof;

4007

4008

ierr = PetscSectionGetDof(section, point, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4008,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4009

size += dof;

4010

}

4011

for (p = 0; p < numPoints; ++p) {

4012

const PetscInt cp = cone[p];

4013

PetscInt dof;

4014

4015

if ((cp < pStart) || (cp >= pEnd)) continue;

4016

ierr = PetscSectionGetDof(section, cp, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4016,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4017

size += dof;

4018

}

4019

if (!values) {

4020

if (csize) *csize = size;

4021

4022

}

4023

ierr = DMGetWorkArray(dm, size, MPIU_SCALAR((MPI_Datatype)0x4c00080b), &array);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4023,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4024

} else {

4025

array = *values;

4026

}

4027

size = 0;

4028

ierr = VecGetArray(v, &vArray);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4028,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4029

if ((point >= pStart) && (point < pEnd)) {

4030

PetscInt dof, off, d;

4031

PetscScalar *varr;

4032

4033

ierr = PetscSectionGetDof(section, point, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4033,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4034

ierr = PetscSectionGetOffset(section, point, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4034,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4035

varr = &vArray[off];

4036

for (d = 0; d < dof; ++d, ++offset) {

4037

array[offset] = varr[d];

4038

}

4039

size += dof;

4040

}

4041

for (p = 0; p < numPoints; ++p) {

4042

const PetscInt cp = cone[p];

4043

PetscInt o = coneO[p];

4044

PetscInt dof, off, d;

4045

PetscScalar *varr;

4046

4047

if ((cp < pStart) || (cp >= pEnd)) continue;

4048

ierr = PetscSectionGetDof(section, cp, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4048,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4049

ierr = PetscSectionGetOffset(section, cp, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4049,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4050

varr = &vArray[off];

4051

if (o >= 0) {

4052

for (d = 0; d < dof; ++d, ++offset) {

4053

array[offset] = varr[d];

4054

}

4055

} else {

4056

for (d = dof-1; d >= 0; --d, ++offset) {

4057

array[offset] = varr[d];

4058

}

4059

}

4060

size += dof;

4061

}

4062

ierr = VecRestoreArray(v, &vArray);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4062,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4063

if (!*values) {

4064

if (csize) *csize = size;

4065

*values = array;

4066

} else {

4067

if (size > *csize) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Size of input array %D < actual size %D", *csize, size)return PetscError(((MPI_Comm)0x44000001),4067,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,63,PETSC_ERROR_INITIAL,"Size of input array %D < actual size %D"
,*csize,size);

4068

*csize = size;

4069

}

4070

4071

}

4072

4073

PetscErrorCode DMPlexGetCompressedClosure(DM dm, PetscSection section, PetscInt point, PetscInt *numPoints, PetscInt **points, PetscSection *clSec, IS *clPoints, const PetscInt **clp)

4074

{

4075

const PetscInt *cla;

4076

PetscInt np, *pts = NULL((void*)0);

4077

PetscErrorCode ierr;

4078

4079

PetscFunctionBeginHotdo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 4079; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_TRUE || petscstack->hotdepth); } ; } while (0);
; } while (0);

4080

ierr = PetscSectionGetClosureIndex(section, (PetscObject) dm, clSec, clPoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4080,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4081

if (!*clPoints) {

4082

PetscInt pStart, pEnd, p, q;

4083

4084

ierr = PetscSectionGetChart(section, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4084,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4085

ierr = DMPlexGetTransitiveClosure(dm, point, PETSC_TRUE, &np, &pts);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4085,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4086

/* Compress out points not in the section */

4087

for (p = 0, q = 0; p < np; p++) {

4088

PetscInt r = pts[2*p];

4089

if ((r >= pStart) && (r < pEnd)) {

4090

pts[q*2] = r;

4091

pts[q*2+1] = pts[2*p+1];

4092

++q;

4093

}

4094

}

4095

np = q;

4096

cla = NULL((void*)0);

4097

} else {

4098

PetscInt dof, off;

4099

4100

ierr = PetscSectionGetDof(*clSec, point, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4100,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4101

ierr = PetscSectionGetOffset(*clSec, point, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4101,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4102

ierr = ISGetIndices(*clPoints, &cla);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4102,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4103

np = dof/2;

4104

pts = (PetscInt *) &cla[off];

4105

}

4106

*numPoints = np;

4107

*points = pts;

4108

*clp = cla;

4109

4110

4111

}

4112

4113

PetscErrorCode DMPlexRestoreCompressedClosure(DM dm, PetscSection section, PetscInt point, PetscInt *numPoints, PetscInt **points, PetscSection *clSec, IS *clPoints, const PetscInt **clp)

4114

{

4115

PetscErrorCode ierr;

4116

4117

PetscFunctionBeginHotdo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 4117; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_TRUE || petscstack->hotdepth); } ; } while (0);
; } while (0);

4118

if (!*clPoints) {

4119

ierr = DMPlexRestoreTransitiveClosure(dm, point, PETSC_TRUE, numPoints, points);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4119,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4120

} else {

4121

ierr = ISRestoreIndices(*clPoints, clp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4121,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4122

}

4123

*numPoints = 0;

4124

*points = NULL((void*)0);

4125

*clSec = NULL((void*)0);

4126

*clPoints = NULL((void*)0);

4127

*clp = NULL((void*)0);

4128

4129

}

4130

4131

PETSC_STATIC_INLINEstatic inline PetscErrorCode DMPlexVecGetClosure_Static(DM dm, PetscSection section, PetscInt numPoints, const PetscInt points[], const PetscInt clperm[], const PetscScalar vArray[], PetscInt *size, PetscScalar array[])

4132

{

4133

PetscInt offset = 0, p;

4134

const PetscInt **perms = NULL((void*)0);

4135

const PetscScalar **flips = NULL((void*)0);

4136

PetscErrorCode ierr;

4137

4138

PetscFunctionBeginHotdo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 4138; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_TRUE || petscstack->hotdepth); } ; } while (0);
; } while (0);

4139

*size = 0;

4140

ierr = PetscSectionGetPointSyms(section,numPoints,points,&perms,&flips);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4140,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4141

for (p = 0; p < numPoints; p++) {

4142

const PetscInt point = points[2*p];

4143

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4144

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4145

PetscInt dof, off, d;

4146

const PetscScalar *varr;

4147

4148

ierr = PetscSectionGetDof(section, point, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4148,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4149

ierr = PetscSectionGetOffset(section, point, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4149,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4150

varr = &vArray[off];

4151

if (clperm) {

4152

if (perm) {

4153

for (d = 0; d < dof; d++) array[clperm[offset + perm[d]]] = varr[d];

4154

} else {

4155

for (d = 0; d < dof; d++) array[clperm[offset + d ]] = varr[d];

4156

}

4157

if (flip) {

4158

for (d = 0; d < dof; d++) array[clperm[offset + d ]] *= flip[d];

4159

}

4160

} else {

4161

if (perm) {

4162

for (d = 0; d < dof; d++) array[offset + perm[d]] = varr[d];

4163

} else {

4164

for (d = 0; d < dof; d++) array[offset + d ] = varr[d];

4165

}

4166

if (flip) {

4167

for (d = 0; d < dof; d++) array[offset + d ] *= flip[d];

4168

}

4169

}

4170

offset += dof;

4171

}

4172

ierr = PetscSectionRestorePointSyms(section,numPoints,points,&perms,&flips);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4172,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4173

*size = offset;

4174

4175

}

4176

4177

PETSC_STATIC_INLINEstatic inline PetscErrorCode DMPlexVecGetClosure_Fields_Static(DM dm, PetscSection section, PetscInt numPoints, const PetscInt points[], PetscInt numFields, const PetscInt clperm[], const PetscScalar vArray[], PetscInt *size, PetscScalar array[])

4178

{

4179

PetscInt offset = 0, f;

4180

PetscErrorCode ierr;

4181

4182

PetscFunctionBeginHotdo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 4182; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_TRUE || petscstack->hotdepth); } ; } while (0);
; } while (0);

4183

*size = 0;

4184

for (f = 0; f < numFields; ++f) {

4185

PetscInt p;

4186

const PetscInt **perms = NULL((void*)0);

4187

const PetscScalar **flips = NULL((void*)0);

4188

4189

ierr = PetscSectionGetFieldPointSyms(section,f,numPoints,points,&perms,&flips);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4189,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4190

for (p = 0; p < numPoints; p++) {

4191

const PetscInt point = points[2*p];

4192

PetscInt fdof, foff, b;

4193

const PetscScalar *varr;

4194

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4195

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4196

4197

ierr = PetscSectionGetFieldDof(section, point, f, &fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4197,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4198

ierr = PetscSectionGetFieldOffset(section, point, f, &foff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4198,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4199

varr = &vArray[foff];

4200

if (clperm) {

4201

if (perm) {for (b = 0; b < fdof; b++) {array[clperm[offset + perm[b]]] = varr[b];}}

4202

else {for (b = 0; b < fdof; b++) {array[clperm[offset + b ]] = varr[b];}}

4203

if (flip) {for (b = 0; b < fdof; b++) {array[clperm[offset + b ]] *= flip[b];}}

4204

} else {

4205

if (perm) {for (b = 0; b < fdof; b++) {array[offset + perm[b]] = varr[b];}}

4206

else {for (b = 0; b < fdof; b++) {array[offset + b ] = varr[b];}}

4207

if (flip) {for (b = 0; b < fdof; b++) {array[offset + b ] *= flip[b];}}

4208

}

4209

offset += fdof;

4210

}

4211

ierr = PetscSectionRestoreFieldPointSyms(section,f,numPoints,points,&perms,&flips);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4211,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4212

}

4213

*size = offset;

4214

4215

}

4216

4217

/*@C

4218

DMPlexVecGetClosure - Get an array of the values on the closure of 'point'

4219

4220

Not collective

4221

4222

Input Parameters:

4223

+ dm - The DM

4224

. section - The section describing the layout in v, or NULL to use the default section

4225

. v - The local vector

4226

. point - The point in the DM

4227

. csize - The size of the input values array, or NULL

4228

- values - An array to use for the values, or NULL to have it allocated automatically

4229

4230

Output Parameters:

4231

+ csize - The number of values in the closure

4232

- values - The array of values. If the user provided NULL, it is a borrowed array and should not be freed

4233

4234

$ Note that DMPlexVecGetClosure/DMPlexVecRestoreClosure only allocates the values array if it set to NULL in the

4235

$ calling function. This is because DMPlexVecGetClosure() is typically called in the inner loop of a Vec or Mat

4236

$ assembly function, and a user may already have allocated storage for this operation.

4237

4238

$ A typical use could be

4239

4240

$ values = NULL;

4241

$ ierr = DMPlexVecGetClosure(dm, NULL, v, p, &clSize, &values);CHKERRQ(ierr);

4242

$ for (cl = 0; cl < clSize; ++cl) {

4243

$ <Compute on closure>

4244

$ }

4245

$ ierr = DMPlexVecRestoreClosure(dm, NULL, v, p, &clSize, &values);CHKERRQ(ierr);

4246

4247

$ or

4248

4249

$ PetscMalloc1(clMaxSize, &values);

4250

$ for (p = pStart; p < pEnd; ++p) {

4251

$ clSize = clMaxSize;

4252

$ ierr = DMPlexVecGetClosure(dm, NULL, v, p, &clSize, &values);CHKERRQ(ierr);

4253

$ for (cl = 0; cl < clSize; ++cl) {

4254

$ <Compute on closure>

4255

$ }

4256

$ }

4257

$ PetscFree(values);

4258

4259

Fortran Notes:

4260

Since it returns an array, this routine is only available in Fortran 90, and you must

4261

include petsc.h90 in your code.

4262

4263

The csize argument is not present in the Fortran 90 binding since it is internal to the array.

4264

4265

Level: intermediate

4266

4267

.seealso DMPlexVecRestoreClosure(), DMPlexVecSetClosure(), DMPlexMatSetClosure()

4268

@*/

4269

PetscErrorCode DMPlexVecGetClosure(DM dm, PetscSection section, Vec v, PetscInt point, PetscInt *csize, PetscScalar *values[])

4270

{

4271

PetscSection clSection;

4272

IS clPoints;

4273

PetscScalar *array;

4274

const PetscScalar *vArray;

4275

PetscInt *points = NULL((void*)0);

4276

const PetscInt *clp, *perm;

4277

PetscInt depth, numFields, numPoints, size;

4278

PetscErrorCode ierr;

4279

4280

PetscFunctionBeginHotdo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 4280; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_TRUE || petscstack->hotdepth); } ; } while (0);
; } while (0);

4281

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),4281,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),4281,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),4281,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),4281,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

4282

if (!section) {ierr = DMGetSection(dm, &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4282,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

4283

PetscValidHeaderSpecific(section, PETSC_SECTION_CLASSID, 2)do { if (!section) return PetscError(((MPI_Comm)0x44000001),4283
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (
!PetscCheckPointer(section,PETSC_OBJECT)) return PetscError((
(MPI_Comm)0x44000001),4283,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(section))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(section))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),4283,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),4283,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",2); } } while (0);

4284

PetscValidHeaderSpecific(v, VEC_CLASSID, 3)do { if (!v) return PetscError(((MPI_Comm)0x44000001),4284,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",3); if (!PetscCheckPointer(v,PETSC_OBJECT
)) return PetscError(((MPI_Comm)0x44000001),4284,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,3); if (((PetscObject)(v))->classid != VEC_CLASSID) { if (
((PetscObject)(v))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),4284,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,3); else return PetscError(((MPI_Comm)0x44000001),4284,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",3); } } while (0);

4285

ierr = DMPlexGetDepth(dm, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4285,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4286

ierr = PetscSectionGetNumFields(section, &numFields);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4286,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4287

if (depth == 1 && numFields < 2) {

4288

ierr = DMPlexVecGetClosure_Depth1_Static(dm, section, v, point, csize, values);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4288,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4289

4290

}

4291

/* Get points */

4292

ierr = DMPlexGetCompressedClosure(dm,section,point,&numPoints,&points,&clSection,&clPoints,&clp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4292,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4293

ierr = PetscSectionGetClosureInversePermutation_Internal(section, (PetscObject) dm, NULL((void*)0), &perm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4293,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4294

/* Get array */

4295

if (!values || !*values) {

4296

PetscInt asize = 0, dof, p;

4297

4298

for (p = 0; p < numPoints*2; p += 2) {

4299

ierr = PetscSectionGetDof(section, points[p], &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4299,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4300

asize += dof;

4301

}

4302

if (!values) {

4303

ierr = DMPlexRestoreCompressedClosure(dm,section,point,&numPoints,&points,&clSection,&clPoints,&clp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4303,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4304

if (csize) *csize = asize;

4305

4306

}

4307

ierr = DMGetWorkArray(dm, asize, MPIU_SCALAR((MPI_Datatype)0x4c00080b), &array);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4307,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4308

} else {

4309

array = *values;

4310

}

4311

ierr = VecGetArrayRead(v, &vArray);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4311,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4312

/* Get values */

4313

if (numFields > 0) {ierr = DMPlexVecGetClosure_Fields_Static(dm, section, numPoints, points, numFields, perm, vArray, &size, array);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4313,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

4314

else {ierr = DMPlexVecGetClosure_Static(dm, section, numPoints, points, perm, vArray, &size, array);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4314,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

4315

/* Cleanup points */

4316

ierr = DMPlexRestoreCompressedClosure(dm,section,point,&numPoints,&points,&clSection,&clPoints,&clp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4316,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4317

/* Cleanup array */

4318

ierr = VecRestoreArrayRead(v, &vArray);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4318,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4319

if (!*values) {

4320

if (csize) *csize = size;

4321

*values = array;

4322

} else {

4323

if (size > *csize) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Size of input array %D < actual size %D", *csize, size)return PetscError(((MPI_Comm)0x44000001),4323,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,63,PETSC_ERROR_INITIAL,"Size of input array %D < actual size %D"
,*csize,size);

4324

*csize = size;

4325

}

4326

4327

}

4328

4329

/*@C

4330

DMPlexVecRestoreClosure - Restore the array of the values on the closure of 'point'

4331

4332

Not collective

4333

4334

Input Parameters:

4335

+ dm - The DM

4336

. section - The section describing the layout in v, or NULL to use the default section

4337

. v - The local vector

4338

. point - The point in the DM

4339

. csize - The number of values in the closure, or NULL

4340

- values - The array of values, which is a borrowed array and should not be freed

4341

4342

Note that the array values are discarded and not copied back into v. In order to copy values back to v, use DMPlexVecSetClosure()

4343

4344

Fortran Notes:

4345

Since it returns an array, this routine is only available in Fortran 90, and you must

4346

include petsc.h90 in your code.

4347

4348

The csize argument is not present in the Fortran 90 binding since it is internal to the array.

4349

4350

Level: intermediate

4351

4352

.seealso DMPlexVecGetClosure(), DMPlexVecSetClosure(), DMPlexMatSetClosure()

4353

@*/

4354

PetscErrorCode DMPlexVecRestoreClosure(DM dm, PetscSection section, Vec v, PetscInt point, PetscInt *csize, PetscScalar *values[])

4355

{

4356

PetscInt size = 0;

4357

PetscErrorCode ierr;

4358

4359

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 4359; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

4360

/* Should work without recalculating size */

4361

ierr = DMRestoreWorkArray(dm, size, MPIU_SCALAR((MPI_Datatype)0x4c00080b), (void*) values);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4361,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4362

*values = NULL((void*)0);

4363

4364

}

4365

4366

PETSC_STATIC_INLINEstatic inline void add (PetscScalar *x, PetscScalar y) {*x += y;}

4367

PETSC_STATIC_INLINEstatic inline void insert(PetscScalar *x, PetscScalar y) {*x = y;}

4368

4369

PETSC_STATIC_INLINEstatic inline PetscErrorCode updatePoint_private(PetscSection section, PetscInt point, PetscInt dof, void (*fuse)(PetscScalar*, PetscScalar), PetscBool setBC, const PetscInt perm[], const PetscScalar flip[], const PetscInt clperm[], const PetscScalar values[], PetscInt offset, PetscScalar array[])

4370

{

4371

PetscInt cdof; /* The number of constraints on this point */

4372

const PetscInt *cdofs; /* The indices of the constrained dofs on this point */

4373

PetscScalar *a;

4374

PetscInt off, cind = 0, k;

4375

PetscErrorCode ierr;

4376

4377

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 4377; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

4378

ierr = PetscSectionGetConstraintDof(section, point, &cdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4378,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4379

ierr = PetscSectionGetOffset(section, point, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4379,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4380

a = &array[off];

4381

if (!cdof || setBC) {

4382

if (clperm) {

4383

if (perm) {for (k = 0; k < dof; ++k) {fuse(&a[k], values[clperm[offset+perm[k]]] * (flip ? flip[perm[k]] : 1.));}}

4384

else {for (k = 0; k < dof; ++k) {fuse(&a[k], values[clperm[offset+ k ]] * (flip ? flip[ k ] : 1.));}}

4385

} else {

4386

if (perm) {for (k = 0; k < dof; ++k) {fuse(&a[k], values[offset+perm[k]] * (flip ? flip[perm[k]] : 1.));}}

4387

else {for (k = 0; k < dof; ++k) {fuse(&a[k], values[offset+ k ] * (flip ? flip[ k ] : 1.));}}

4388

}

4389

} else {

4390

ierr = PetscSectionGetConstraintIndices(section, point, &cdofs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4390,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4391

if (clperm) {

4392

if (perm) {for (k = 0; k < dof; ++k) {

4393

if ((cind < cdof) && (k == cdofs[cind])) {++cind; continue;}

4394

fuse(&a[k], values[clperm[offset+perm[k]]] * (flip ? flip[perm[k]] : 1.));

4395

}

4396

} else {

4397

for (k = 0; k < dof; ++k) {

4398

if ((cind < cdof) && (k == cdofs[cind])) {++cind; continue;}

4399

fuse(&a[k], values[clperm[offset+ k ]] * (flip ? flip[ k ] : 1.));

4400

}

4401

}

4402

} else {

4403

if (perm) {

4404

for (k = 0; k < dof; ++k) {

4405

if ((cind < cdof) && (k == cdofs[cind])) {++cind; continue;}

4406

fuse(&a[k], values[offset+perm[k]] * (flip ? flip[perm[k]] : 1.));

4407

}

4408

} else {

4409

for (k = 0; k < dof; ++k) {

4410

if ((cind < cdof) && (k == cdofs[cind])) {++cind; continue;}

4411

fuse(&a[k], values[offset+ k ] * (flip ? flip[ k ] : 1.));

4412

}

4413

}

4414

}

4415

}

4416

4417

}

4418

4419

PETSC_STATIC_INLINEstatic inline PetscErrorCode updatePointBC_private(PetscSection section, PetscInt point, PetscInt dof, void (*fuse)(PetscScalar*, PetscScalar), const PetscInt perm[], const PetscScalar flip[], const PetscInt clperm[], const PetscScalar values[], PetscInt offset, PetscScalar array[])

4420

{

4421

PetscInt cdof; /* The number of constraints on this point */

4422

const PetscInt *cdofs; /* The indices of the constrained dofs on this point */

4423

PetscScalar *a;

4424

PetscInt off, cind = 0, k;

4425

PetscErrorCode ierr;

4426

4427

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 4427; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

4428

ierr = PetscSectionGetConstraintDof(section, point, &cdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4428,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4429

ierr = PetscSectionGetOffset(section, point, &off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4429,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4430

a = &array[off];

4431

if (cdof) {

4432

ierr = PetscSectionGetConstraintIndices(section, point, &cdofs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4432,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4433

if (clperm) {

4434

if (perm) {

4435

for (k = 0; k < dof; ++k) {

4436

if ((cind < cdof) && (k == cdofs[cind])) {

4437

fuse(&a[k], values[clperm[offset+perm[k]]] * (flip ? flip[perm[k]] : 1.));

4438

cind++;

4439

}

4440

}

4441

} else {

4442

for (k = 0; k < dof; ++k) {

4443

if ((cind < cdof) && (k == cdofs[cind])) {

4444

fuse(&a[k], values[clperm[offset+ k ]] * (flip ? flip[ k ] : 1.));

4445

cind++;

4446

}

4447

}

4448

}

4449

} else {

4450

if (perm) {

4451

for (k = 0; k < dof; ++k) {

4452

if ((cind < cdof) && (k == cdofs[cind])) {

4453

fuse(&a[k], values[offset+perm[k]] * (flip ? flip[perm[k]] : 1.));

4454

cind++;

4455

}

4456

}

4457

} else {

4458

for (k = 0; k < dof; ++k) {

4459

if ((cind < cdof) && (k == cdofs[cind])) {

4460

fuse(&a[k], values[offset+ k ] * (flip ? flip[ k ] : 1.));

4461

cind++;

4462

}

4463

}

4464

}

4465

}

4466

}

4467

4468

}

4469

4470

PETSC_STATIC_INLINEstatic inline PetscErrorCode updatePointFields_private(PetscSection section, PetscInt point, const PetscInt *perm, const PetscScalar *flip, PetscInt f, void (*fuse)(PetscScalar*, PetscScalar), PetscBool setBC, const PetscInt clperm[], const PetscScalar values[], PetscInt *offset, PetscScalar array[])

4471

{

4472

PetscScalar *a;

4473

PetscInt fdof, foff, fcdof, foffset = *offset;

4474

const PetscInt *fcdofs; /* The indices of the constrained dofs for field f on this point */

4475

PetscInt cind = 0, b;

4476

PetscErrorCode ierr;

4477

4478

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 4478; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

4479

ierr = PetscSectionGetFieldDof(section, point, f, &fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4479,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4480

ierr = PetscSectionGetFieldConstraintDof(section, point, f, &fcdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4480,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4481

ierr = PetscSectionGetFieldOffset(section, point, f, &foff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4481,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4482

a = &array[foff];

4483

if (!fcdof || setBC) {

4484

if (clperm) {

4485

if (perm) {for (b = 0; b < fdof; b++) {fuse(&a[b], values[clperm[foffset+perm[b]]] * (flip ? flip[perm[b]] : 1.));}}

4486

else {for (b = 0; b < fdof; b++) {fuse(&a[b], values[clperm[foffset+ b ]] * (flip ? flip[ b ] : 1.));}}

4487

} else {

4488

if (perm) {for (b = 0; b < fdof; b++) {fuse(&a[b], values[foffset+perm[b]] * (flip ? flip[perm[b]] : 1.));}}

4489

else {for (b = 0; b < fdof; b++) {fuse(&a[b], values[foffset+ b ] * (flip ? flip[ b ] : 1.));}}

4490

}

4491

} else {

4492

ierr = PetscSectionGetFieldConstraintIndices(section, point, f, &fcdofs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4492,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4493

if (clperm) {

4494

if (perm) {

4495

for (b = 0; b < fdof; b++) {

4496

if ((cind < fcdof) && (b == fcdofs[cind])) {++cind; continue;}

4497

fuse(&a[b], values[clperm[foffset+perm[b]]] * (flip ? flip[perm[b]] : 1.));

4498

}

4499

} else {

4500

for (b = 0; b < fdof; b++) {

4501

if ((cind < fcdof) && (b == fcdofs[cind])) {++cind; continue;}

4502

fuse(&a[b], values[clperm[foffset+ b ]] * (flip ? flip[ b ] : 1.));

4503

}

4504

}

4505

} else {

4506

if (perm) {

4507

for (b = 0; b < fdof; b++) {

4508

if ((cind < fcdof) && (b == fcdofs[cind])) {++cind; continue;}

4509

fuse(&a[b], values[foffset+perm[b]] * (flip ? flip[perm[b]] : 1.));

4510

}

4511

} else {

4512

for (b = 0; b < fdof; b++) {

4513

if ((cind < fcdof) && (b == fcdofs[cind])) {++cind; continue;}

4514

fuse(&a[b], values[foffset+ b ] * (flip ? flip[ b ] : 1.));

4515

}

4516

}

4517

}

4518

}

4519

*offset += fdof;

4520

4521

}

4522

4523

PETSC_STATIC_INLINEstatic inline PetscErrorCode updatePointFieldsBC_private(PetscSection section, PetscInt point, const PetscInt perm[], const PetscScalar flip[], PetscInt f, PetscInt Ncc, const PetscInt comps[], void (*fuse)(PetscScalar*, PetscScalar), const PetscInt clperm[], const PetscScalar values[], PetscInt *offset, PetscScalar array[])

4524

{

4525

PetscScalar *a;

4526

PetscInt fdof, foff, fcdof, foffset = *offset;

4527

const PetscInt *fcdofs; /* The indices of the constrained dofs for field f on this point */

4528

PetscInt cind = 0, ncind = 0, b;

4529

PetscBool ncSet, fcSet;

4530

PetscErrorCode ierr;

4531

4532

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 4532; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

4533

ierr = PetscSectionGetFieldDof(section, point, f, &fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4533,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4534

ierr = PetscSectionGetFieldConstraintDof(section, point, f, &fcdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4534,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4535

ierr = PetscSectionGetFieldOffset(section, point, f, &foff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4535,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4536

a = &array[foff];

4537

if (fcdof) {

4538

/* We just override fcdof and fcdofs with Ncc and comps */

4539

ierr = PetscSectionGetFieldConstraintIndices(section, point, f, &fcdofs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4539,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4540

if (clperm) {

4541

if (perm) {

4542

if (comps) {

4543

for (b = 0; b < fdof; b++) {

4544

ncSet = fcSet = PETSC_FALSE;

4545

if ((ncind < Ncc) && (b == comps[ncind])) {++ncind; ncSet = PETSC_TRUE;}

4546

if ((cind < fcdof) && (b == fcdofs[cind])) {++cind; fcSet = PETSC_TRUE;}

4547

if (ncSet && fcSet) {fuse(&a[b], values[clperm[foffset+perm[b]]] * (flip ? flip[perm[b]] : 1.));}

4548

}

4549

} else {

4550

for (b = 0; b < fdof; b++) {

4551

if ((cind < fcdof) && (b == fcdofs[cind])) {

4552

fuse(&a[b], values[clperm[foffset+perm[b]]] * (flip ? flip[perm[b]] : 1.));

4553

++cind;

4554

}

4555

}

4556

}

4557

} else {

4558

if (comps) {

4559

for (b = 0; b < fdof; b++) {

4560

ncSet = fcSet = PETSC_FALSE;

4561

if ((ncind < Ncc) && (b == comps[ncind])) {++ncind; ncSet = PETSC_TRUE;}

4562

if ((cind < fcdof) && (b == fcdofs[cind])) {++cind; fcSet = PETSC_TRUE;}

4563

if (ncSet && fcSet) {fuse(&a[b], values[clperm[foffset+ b ]] * (flip ? flip[ b ] : 1.));}

4564

}

4565

} else {

4566

for (b = 0; b < fdof; b++) {

4567

if ((cind < fcdof) && (b == fcdofs[cind])) {

4568

fuse(&a[b], values[clperm[foffset+ b ]] * (flip ? flip[ b ] : 1.));

4569

++cind;

4570

}

4571

}

4572

}

4573

}

4574

} else {

4575

if (perm) {

4576

if (comps) {

4577

for (b = 0; b < fdof; b++) {

4578

ncSet = fcSet = PETSC_FALSE;

4579

if ((ncind < Ncc) && (b == comps[ncind])) {++ncind; ncSet = PETSC_TRUE;}

4580

if ((cind < fcdof) && (b == fcdofs[cind])) {++cind; fcSet = PETSC_TRUE;}

4581

if (ncSet && fcSet) {fuse(&a[b], values[foffset+perm[b]] * (flip ? flip[perm[b]] : 1.));}

4582

}

4583

} else {

4584

for (b = 0; b < fdof; b++) {

4585

if ((cind < fcdof) && (b == fcdofs[cind])) {

4586

fuse(&a[b], values[foffset+perm[b]] * (flip ? flip[perm[b]] : 1.));

4587

++cind;

4588

}

4589

}

4590

}

4591

} else {

4592

if (comps) {

4593

for (b = 0; b < fdof; b++) {

4594

ncSet = fcSet = PETSC_FALSE;

4595

if ((ncind < Ncc) && (b == comps[ncind])) {++ncind; ncSet = PETSC_TRUE;}

4596

if ((cind < fcdof) && (b == fcdofs[cind])) {++cind; fcSet = PETSC_TRUE;}

4597

if (ncSet && fcSet) {fuse(&a[b], values[foffset+ b ] * (flip ? flip[ b ] : 1.));}

4598

}

4599

} else {

4600

for (b = 0; b < fdof; b++) {

4601

if ((cind < fcdof) && (b == fcdofs[cind])) {

4602

fuse(&a[b], values[foffset+ b ] * (flip ? flip[ b ] : 1.));

4603

++cind;

4604

}

4605

}

4606

}

4607

}

4608

}

4609

}

4610

*offset += fdof;

4611

4612

}

4613

4614

PETSC_STATIC_INLINEstatic inline PetscErrorCode DMPlexVecSetClosure_Depth1_Static(DM dm, PetscSection section, Vec v, PetscInt point, const PetscScalar values[], InsertMode mode)

4615

{

4616

PetscScalar *array;

4617

const PetscInt *cone, *coneO;

4618

PetscInt pStart, pEnd, p, numPoints, off, dof;

4619

PetscErrorCode ierr;

4620

4621

PetscFunctionBeginHotdo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 4621; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_TRUE || petscstack->hotdepth); } ; } while (0);
; } while (0);

4622

ierr = PetscSectionGetChart(section, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4622,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4623

ierr = DMPlexGetConeSize(dm, point, &numPoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4623,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4624

ierr = DMPlexGetCone(dm, point, &cone);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4624,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4625

ierr = DMPlexGetConeOrientation(dm, point, &coneO);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4625,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4626

ierr = VecGetArray(v, &array);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4626,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4627

for (p = 0, off = 0; p <= numPoints; ++p, off += dof) {

4628

const PetscInt cp = !p ? point : cone[p-1];

4629

const PetscInt o = !p ? 0 : coneO[p-1];

4630

4631

if ((cp < pStart) || (cp >= pEnd)) {dof = 0; continue;}

4632

ierr = PetscSectionGetDof(section, cp, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4632,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4633

/* ADD_VALUES */

4634

{

4635

const PetscInt *cdofs; /* The indices of the constrained dofs on this point */

4636

PetscScalar *a;

4637

PetscInt cdof, coff, cind = 0, k;

4638

4639

ierr = PetscSectionGetConstraintDof(section, cp, &cdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4639,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4640

ierr = PetscSectionGetOffset(section, cp, &coff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4640,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4641

a = &array[coff];

4642

if (!cdof) {

4643

if (o >= 0) {

4644

for (k = 0; k < dof; ++k) {

4645

a[k] += values[off+k];

4646

}

4647

} else {

4648

for (k = 0; k < dof; ++k) {

4649

a[k] += values[off+dof-k-1];

4650

}

4651

}

4652

} else {

4653

ierr = PetscSectionGetConstraintIndices(section, cp, &cdofs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4653,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4654

if (o >= 0) {

4655

for (k = 0; k < dof; ++k) {

4656

if ((cind < cdof) && (k == cdofs[cind])) {++cind; continue;}

4657

a[k] += values[off+k];

4658

}

4659

} else {

4660

for (k = 0; k < dof; ++k) {

4661

if ((cind < cdof) && (k == cdofs[cind])) {++cind; continue;}

4662

a[k] += values[off+dof-k-1];

4663

}

4664

}

4665

}

4666

}

4667

}

4668

ierr = VecRestoreArray(v, &array);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4668,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4669

4670

}

4671

4672

/*@C

4673

DMPlexVecSetClosure - Set an array of the values on the closure of 'point'

4674

4675

Not collective

4676

4677

Input Parameters:

4678

+ dm - The DM

4679

. section - The section describing the layout in v, or NULL to use the default section

4680

. v - The local vector

4681

. point - The point in the DM

4682

. values - The array of values

4683

- mode - The insert mode. One of INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_VALUES, ADD_VALUES, INSERT_BC_VALUES, and ADD_BC_VALUES,

4684

where INSERT_ALL_VALUES and ADD_ALL_VALUES also overwrite boundary conditions.

4685

4686

Fortran Notes:

4687

This routine is only available in Fortran 90, and you must include petsc.h90 in your code.

4688

4689

Level: intermediate

4690

4691

.seealso DMPlexVecGetClosure(), DMPlexMatSetClosure()

4692

@*/

4693

PetscErrorCode DMPlexVecSetClosure(DM dm, PetscSection section, Vec v, PetscInt point, const PetscScalar values[], InsertMode mode)

4694

{

4695

PetscSection clSection;

4696

IS clPoints;

4697

PetscScalar *array;

4698

PetscInt *points = NULL((void*)0);

4699

const PetscInt *clp, *clperm;

4700

PetscInt depth, numFields, numPoints, p;

4701

PetscErrorCode ierr;

4702

4703

PetscFunctionBeginHotdo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 4703; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_TRUE || petscstack->hotdepth); } ; } while (0);
; } while (0);

4704

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),4704,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),4704,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),4704,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),4704,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

4705

if (!section) {ierr = DMGetSection(dm, &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4705,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

4706

PetscValidHeaderSpecific(section, PETSC_SECTION_CLASSID, 2)do { if (!section) return PetscError(((MPI_Comm)0x44000001),4706
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (
!PetscCheckPointer(section,PETSC_OBJECT)) return PetscError((
(MPI_Comm)0x44000001),4706,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(section))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(section))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),4706,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),4706,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",2); } } while (0);

4707

PetscValidHeaderSpecific(v, VEC_CLASSID, 3)do { if (!v) return PetscError(((MPI_Comm)0x44000001),4707,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",3); if (!PetscCheckPointer(v,PETSC_OBJECT
)) return PetscError(((MPI_Comm)0x44000001),4707,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,3); if (((PetscObject)(v))->classid != VEC_CLASSID) { if (
((PetscObject)(v))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),4707,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,3); else return PetscError(((MPI_Comm)0x44000001),4707,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",3); } } while (0);

4708

ierr = DMPlexGetDepth(dm, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4708,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4709

ierr = PetscSectionGetNumFields(section, &numFields);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4709,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4710

if (depth == 1 && numFields < 2 && mode == ADD_VALUES) {

4711

ierr = DMPlexVecSetClosure_Depth1_Static(dm, section, v, point, values, mode);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4711,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4712

4713

}

4714

/* Get points */

4715

ierr = PetscSectionGetClosureInversePermutation_Internal(section, (PetscObject) dm, NULL((void*)0), &clperm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4715,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4716

ierr = DMPlexGetCompressedClosure(dm,section,point,&numPoints,&points,&clSection,&clPoints,&clp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4716,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4717

/* Get array */

4718

ierr = VecGetArray(v, &array);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4718,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4719

/* Get values */

4720

if (numFields > 0) {

4721

PetscInt offset = 0, f;

4722

for (f = 0; f < numFields; ++f) {

4723

const PetscInt **perms = NULL((void*)0);

4724

const PetscScalar **flips = NULL((void*)0);

4725

4726

ierr = PetscSectionGetFieldPointSyms(section,f,numPoints,points,&perms,&flips);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4726,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4727

switch (mode) {

4728

case INSERT_VALUES:

4729

for (p = 0; p < numPoints; p++) {

4730

const PetscInt point = points[2*p];

4731

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4732

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4733

updatePointFields_private(section, point, perm, flip, f, insert, PETSC_FALSE, clperm, values, &offset, array);

4734

} break;

4735

case INSERT_ALL_VALUES:

4736

for (p = 0; p < numPoints; p++) {

4737

const PetscInt point = points[2*p];

4738

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4739

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4740

updatePointFields_private(section, point, perm, flip, f, insert, PETSC_TRUE, clperm, values, &offset, array);

4741

} break;

4742

case INSERT_BC_VALUES:

4743

for (p = 0; p < numPoints; p++) {

4744

const PetscInt point = points[2*p];

4745

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4746

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4747

updatePointFieldsBC_private(section, point, perm, flip, f, -1, NULL((void*)0), insert, clperm, values, &offset, array);

4748

} break;

4749

case ADD_VALUES:

4750

for (p = 0; p < numPoints; p++) {

4751

const PetscInt point = points[2*p];

4752

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4753

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4754

updatePointFields_private(section, point, perm, flip, f, add, PETSC_FALSE, clperm, values, &offset, array);

4755

} break;

4756

case ADD_ALL_VALUES:

4757

for (p = 0; p < numPoints; p++) {

4758

const PetscInt point = points[2*p];

4759

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4760

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4761

updatePointFields_private(section, point, perm, flip, f, add, PETSC_TRUE, clperm, values, &offset, array);

4762

} break;

4763

case ADD_BC_VALUES:

4764

for (p = 0; p < numPoints; p++) {

4765

const PetscInt point = points[2*p];

4766

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4767

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4768

updatePointFieldsBC_private(section, point, perm, flip, f, -1, NULL((void*)0), add, clperm, values, &offset, array);

4769

} break;

4770

default:

4771

SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Invalid insert mode %d", mode)return PetscError(PetscObjectComm((PetscObject)dm),4771,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Invalid insert mode %d",mode);

4772

}

4773

ierr = PetscSectionRestoreFieldPointSyms(section,f,numPoints,points,&perms,&flips);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4773,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4774

}

4775

} else {

4776

PetscInt dof, off;

4777

const PetscInt **perms = NULL((void*)0);

4778

const PetscScalar **flips = NULL((void*)0);

4779

4780

ierr = PetscSectionGetPointSyms(section,numPoints,points,&perms,&flips);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4780,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4781

switch (mode) {

4782

case INSERT_VALUES:

4783

for (p = 0, off = 0; p < numPoints; p++, off += dof) {

4784

const PetscInt point = points[2*p];

4785

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4786

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4787

ierr = PetscSectionGetDof(section, point, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4787,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4788

updatePoint_private(section, point, dof, insert, PETSC_FALSE, perm, flip, clperm, values, off, array);

4789

} break;

4790

case INSERT_ALL_VALUES:

4791

for (p = 0, off = 0; p < numPoints; p++, off += dof) {

4792

const PetscInt point = points[2*p];

4793

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4794

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4795

ierr = PetscSectionGetDof(section, point, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4795,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4796

updatePoint_private(section, point, dof, insert, PETSC_TRUE, perm, flip, clperm, values, off, array);

4797

} break;

4798

case INSERT_BC_VALUES:

4799

for (p = 0, off = 0; p < numPoints; p++, off += dof) {

4800

const PetscInt point = points[2*p];

4801

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4802

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4803

ierr = PetscSectionGetDof(section, point, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4803,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4804

updatePointBC_private(section, point, dof, insert, perm, flip, clperm, values, off, array);

4805

} break;

4806

case ADD_VALUES:

4807

for (p = 0, off = 0; p < numPoints; p++, off += dof) {

4808

const PetscInt point = points[2*p];

4809

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4810

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4811

ierr = PetscSectionGetDof(section, point, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4811,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4812

updatePoint_private(section, point, dof, add, PETSC_FALSE, perm, flip, clperm, values, off, array);

4813

} break;

4814

case ADD_ALL_VALUES:

4815

for (p = 0, off = 0; p < numPoints; p++, off += dof) {

4816

const PetscInt point = points[2*p];

4817

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4818

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4819

ierr = PetscSectionGetDof(section, point, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4819,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4820

updatePoint_private(section, point, dof, add, PETSC_TRUE, perm, flip, clperm, values, off, array);

4821

} break;

4822

case ADD_BC_VALUES:

4823

for (p = 0, off = 0; p < numPoints; p++, off += dof) {

4824

const PetscInt point = points[2*p];

4825

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4826

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4827

ierr = PetscSectionGetDof(section, point, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4827,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4828

updatePointBC_private(section, point, dof, add, perm, flip, clperm, values, off, array);

4829

} break;

4830

default:

4831

SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Invalid insert mode %d", mode)return PetscError(PetscObjectComm((PetscObject)dm),4831,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Invalid insert mode %d",mode);

4832

}

4833

ierr = PetscSectionRestorePointSyms(section,numPoints,points,&perms,&flips);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4833,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4834

}

4835

/* Cleanup points */

4836

ierr = DMPlexRestoreCompressedClosure(dm,section,point,&numPoints,&points,&clSection,&clPoints,&clp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4836,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4837

/* Cleanup array */

4838

ierr = VecRestoreArray(v, &array);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4838,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4839

4840

}

4841

4842

PetscErrorCode DMPlexVecSetFieldClosure_Internal(DM dm, PetscSection section, Vec v, PetscBool fieldActive[], PetscInt point, PetscInt Ncc, const PetscInt comps[], const PetscScalar values[], InsertMode mode)

4843

{

4844

PetscSection clSection;

4845

IS clPoints;

4846

PetscScalar *array;

4847

PetscInt *points = NULL((void*)0);

4848

const PetscInt *clp, *clperm;

4849

PetscInt numFields, numPoints, p;

4850

PetscInt offset = 0, f;

4851

PetscErrorCode ierr;

4852

4853

PetscFunctionBeginHotdo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 4853; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_TRUE || petscstack->hotdepth); } ; } while (0);
; } while (0);

4854

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),4854,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),4854,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),4854,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),4854,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

4855

if (!section) {ierr = DMGetSection(dm, &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4855,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

4856

PetscValidHeaderSpecific(section, PETSC_SECTION_CLASSID, 2)do { if (!section) return PetscError(((MPI_Comm)0x44000001),4856
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (
!PetscCheckPointer(section,PETSC_OBJECT)) return PetscError((
(MPI_Comm)0x44000001),4856,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(section))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(section))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),4856,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),4856,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",2); } } while (0);

4857

PetscValidHeaderSpecific(v, VEC_CLASSID, 3)do { if (!v) return PetscError(((MPI_Comm)0x44000001),4857,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",3); if (!PetscCheckPointer(v,PETSC_OBJECT
)) return PetscError(((MPI_Comm)0x44000001),4857,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,3); if (((PetscObject)(v))->classid != VEC_CLASSID) { if (
((PetscObject)(v))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),4857,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,3); else return PetscError(((MPI_Comm)0x44000001),4857,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",3); } } while (0);

4858

ierr = PetscSectionGetNumFields(section, &numFields);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4858,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4859

/* Get points */

4860

ierr = PetscSectionGetClosureInversePermutation_Internal(section, (PetscObject) dm, NULL((void*)0), &clperm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4860,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4861

ierr = DMPlexGetCompressedClosure(dm,section,point,&numPoints,&points,&clSection,&clPoints,&clp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4861,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4862

/* Get array */

4863

ierr = VecGetArray(v, &array);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4863,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4864

/* Get values */

4865

for (f = 0; f < numFields; ++f) {

4866

const PetscInt **perms = NULL((void*)0);

4867

const PetscScalar **flips = NULL((void*)0);

4868

4869

if (!fieldActive[f]) {

4870

for (p = 0; p < numPoints*2; p += 2) {

4871

PetscInt fdof;

4872

ierr = PetscSectionGetFieldDof(section, points[p], f, &fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4872,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4873

offset += fdof;

4874

}

4875

continue;

4876

}

4877

ierr = PetscSectionGetFieldPointSyms(section,f,numPoints,points,&perms,&flips);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4877,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4878

switch (mode) {

4879

case INSERT_VALUES:

4880

for (p = 0; p < numPoints; p++) {

4881

const PetscInt point = points[2*p];

4882

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4883

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4884

updatePointFields_private(section, point, perm, flip, f, insert, PETSC_FALSE, clperm, values, &offset, array);

4885

} break;

4886

case INSERT_ALL_VALUES:

4887

for (p = 0; p < numPoints; p++) {

4888

const PetscInt point = points[2*p];

4889

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4890

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4891

updatePointFields_private(section, point, perm, flip, f, insert, PETSC_TRUE, clperm, values, &offset, array);

4892

} break;

4893

case INSERT_BC_VALUES:

4894

for (p = 0; p < numPoints; p++) {

4895

const PetscInt point = points[2*p];

4896

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4897

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4898

updatePointFieldsBC_private(section, point, perm, flip, f, Ncc, comps, insert, clperm, values, &offset, array);

4899

} break;

4900

case ADD_VALUES:

4901

for (p = 0; p < numPoints; p++) {

4902

const PetscInt point = points[2*p];

4903

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4904

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4905

updatePointFields_private(section, point, perm, flip, f, add, PETSC_FALSE, clperm, values, &offset, array);

4906

} break;

4907

case ADD_ALL_VALUES:

4908

for (p = 0; p < numPoints; p++) {

4909

const PetscInt point = points[2*p];

4910

const PetscInt *perm = perms ? perms[p] : NULL((void*)0);

4911

const PetscScalar *flip = flips ? flips[p] : NULL((void*)0);

4912

updatePointFields_private(section, point, perm, flip, f, add, PETSC_TRUE, clperm, values, &offset, array);

4913

} break;

4914

default:

4915

SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Invalid insert mode %d", mode)return PetscError(PetscObjectComm((PetscObject)dm),4915,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Invalid insert mode %d",mode);

4916

}

4917

ierr = PetscSectionRestoreFieldPointSyms(section,f,numPoints,points,&perms,&flips);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4917,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4918

}

4919

/* Cleanup points */

4920

ierr = DMPlexRestoreCompressedClosure(dm,section,point,&numPoints,&points,&clSection,&clPoints,&clp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4920,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4921

/* Cleanup array */

4922

ierr = VecRestoreArray(v, &array);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4922,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4923

4924

}

4925

4926

static PetscErrorCode DMPlexPrintMatSetValues(PetscViewer viewer, Mat A, PetscInt point, PetscInt numRIndices, const PetscInt rindices[], PetscInt numCIndices, const PetscInt cindices[], const PetscScalar values[])

4927

{

4928

PetscMPIInt rank;

4929

PetscInt i, j;

4930

PetscErrorCode ierr;

4931

4932

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 4932; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

4933

ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)A), &rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4933,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4934

ierr = PetscViewerASCIIPrintf(viewer, "[%d]mat for point %D\n", rank, point);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4934,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4935

for (i = 0; i < numRIndices; i++) {ierr = PetscViewerASCIIPrintf(viewer, "[%d]mat row indices[%D] = %D\n", rank, i, rindices[i]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4935,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

4936

for (i = 0; i < numCIndices; i++) {ierr = PetscViewerASCIIPrintf(viewer, "[%d]mat col indices[%D] = %D\n", rank, i, cindices[i]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4936,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

4937

numCIndices = numCIndices ? numCIndices : numRIndices;

4938

for (i = 0; i < numRIndices; i++) {

4939

ierr = PetscViewerASCIIPrintf(viewer, "[%d]", rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4939,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4940

for (j = 0; j < numCIndices; j++) {

4941

#if defined(PETSC_USE_COMPLEX)

4942

ierr = PetscViewerASCIIPrintf(viewer, " (%g,%g)", (double)PetscRealPart(values[i*numCIndices+j])(values[i*numCIndices+j]), (double)PetscImaginaryPart(values[i*numCIndices+j])((PetscReal)0.));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4942,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4943

#else

4944

ierr = PetscViewerASCIIPrintf(viewer, " %g", (double)values[i*numCIndices+j]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4944,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4945

#endif

4946

}

4947

ierr = PetscViewerASCIIPrintf(viewer, "\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4947,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4948

}

4949

4950

}

4951

4952

4953

DMPlexGetIndicesPoint_Internal - Add the indices for dofs on a point to an index array

4954

4955

Input Parameters:

4956

+ section - The section for this data layout

4957

. point - The point contributing dofs with these indices

4958

. off - The global offset of this point

4959

. loff - The local offset of each field

4960

. setBC - The flag determining whether to include indices of bounsary values

4961

. perm - A permutation of the dofs on this point, or NULL

4962

- indperm - A permutation of the entire indices array, or NULL

4963

4964

Output Parameter:

4965

. indices - Indices for dofs on this point

4966

4967

Level: developer

4968

4969

Note: The indices could be local or global, depending on the value of 'off'.

4970

4971

PetscErrorCode DMPlexGetIndicesPoint_Internal(PetscSection section, PetscInt point, PetscInt off, PetscInt *loff, PetscBool setBC, const PetscInt perm[], const PetscInt indperm[], PetscInt indices[])

4972

{

4973

PetscInt dof; /* The number of unknowns on this point */

4974

PetscInt cdof; /* The number of constraints on this point */

4975

const PetscInt *cdofs; /* The indices of the constrained dofs on this point */

4976

PetscInt cind = 0, k;

4977

PetscErrorCode ierr;

4978

4979

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 4979; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

4980

ierr = PetscSectionGetDof(section, point, &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4980,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4981

ierr = PetscSectionGetConstraintDof(section, point, &cdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4981,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4982

if (!cdof || setBC) {

4983

for (k = 0; k < dof; ++k) {

4984

const PetscInt preind = perm ? *loff+perm[k] : *loff+k;

4985

const PetscInt ind = indperm ? indperm[preind] : preind;

4986

4987

indices[ind] = off + k;

4988

}

4989

} else {

4990

ierr = PetscSectionGetConstraintIndices(section, point, &cdofs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),4990,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

4991

for (k = 0; k < dof; ++k) {

4992

const PetscInt preind = perm ? *loff+perm[k] : *loff+k;

4993

const PetscInt ind = indperm ? indperm[preind] : preind;

4994

4995

if ((cind < cdof) && (k == cdofs[cind])) {

4996

/* Insert check for returning constrained indices */

4997

indices[ind] = -(off+k+1);

4998

++cind;

4999

} else {

5000

indices[ind] = off+k-cind;

5001

}

5002

}

5003

}

5004

*loff += dof;

5005

5006

}

5007

5008

5009

This version only believes the point offset from the globalSection

5010

5011

. off - The global offset of this point

5012

5013

PetscErrorCode DMPlexGetIndicesPointFields_Internal(PetscSection section, PetscInt point, PetscInt off, PetscInt foffs[], PetscBool setBC, const PetscInt ***perms, PetscInt permsoff, const PetscInt indperm[], PetscInt indices[])

5014

{

5015

PetscInt numFields, foff, f;

5016

PetscErrorCode ierr;

5017

5018

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 5018; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

5019

ierr = PetscSectionGetNumFields(section, &numFields);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5019,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5020

for (f = 0, foff = 0; f < numFields; ++f) {

5021

PetscInt fdof, cfdof;

5022

const PetscInt *fcdofs; /* The indices of the constrained dofs for field f on this point */

5023

PetscInt cind = 0, b;

5024

const PetscInt *perm = (perms && perms[f]) ? perms[f][permsoff] : NULL((void*)0);

5025

5026

ierr = PetscSectionGetFieldDof(section, point, f, &fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5026,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5027

ierr = PetscSectionGetFieldConstraintDof(section, point, f, &cfdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5027,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5028

if (!cfdof || setBC) {

5029

for (b = 0; b < fdof; ++b) {

5030

const PetscInt preind = perm ? foffs[f]+perm[b] : foffs[f]+b;

5031

const PetscInt ind = indperm ? indperm[preind] : preind;

5032

5033

indices[ind] = off+foff+b;

5034

}

5035

} else {

5036

ierr = PetscSectionGetFieldConstraintIndices(section, point, f, &fcdofs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5036,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5037

for (b = 0; b < fdof; ++b) {

5038

const PetscInt preind = perm ? foffs[f]+perm[b] : foffs[f]+b;

5039

const PetscInt ind = indperm ? indperm[preind] : preind;

5040

5041

if ((cind < cfdof) && (b == fcdofs[cind])) {

5042

indices[ind] = -(off+foff+b+1);

5043

++cind;

5044

} else {

5045

indices[ind] = off+foff+b-cind;

5046

}

5047

}

5048

}

5049

foff += (setBC ? fdof : (fdof - cfdof));

5050

foffs[f] += fdof;

5051

}

5052

5053

}

5054

5055

5056

This version believes the globalSection offsets for each field, rather than just the point offset

5057

5058

. foffs - The offset into 'indices' for each field, since it is segregated by field

5059

5060

PetscErrorCode DMPlexGetIndicesPointFieldsSplit_Internal(PetscSection section, PetscSection globalSection, PetscInt point, PetscInt foffs[], PetscBool setBC, const PetscInt ***perms, PetscInt permsoff, const PetscInt indperm[], PetscInt indices[])

5061

{

5062

PetscInt numFields, foff, f;

5063

PetscErrorCode ierr;

5064

5065

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 5065; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

5066

ierr = PetscSectionGetNumFields(section, &numFields);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5066,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5067

for (f = 0; f < numFields; ++f) {

5068

PetscInt fdof, cfdof;

5069

const PetscInt *fcdofs; /* The indices of the constrained dofs for field f on this point */

5070

PetscInt cind = 0, b;

5071

const PetscInt *perm = (perms && perms[f]) ? perms[f][permsoff] : NULL((void*)0);

5072

5073

ierr = PetscSectionGetFieldDof(section, point, f, &fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5073,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5074

ierr = PetscSectionGetFieldConstraintDof(section, point, f, &cfdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5074,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5075

ierr = PetscSectionGetFieldOffset(globalSection, point, f, &foff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5075,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5076

if (!cfdof || setBC) {

5077

for (b = 0; b < fdof; ++b) {

5078

const PetscInt preind = perm ? foffs[f]+perm[b] : foffs[f]+b;

5079

const PetscInt ind = indperm ? indperm[preind] : preind;

5080

5081

indices[ind] = foff+b;

5082

}

5083

} else {

5084

ierr = PetscSectionGetFieldConstraintIndices(section, point, f, &fcdofs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5084,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5085

for (b = 0; b < fdof; ++b) {

5086

const PetscInt preind = perm ? foffs[f]+perm[b] : foffs[f]+b;

5087

const PetscInt ind = indperm ? indperm[preind] : preind;

5088

5089

if ((cind < cfdof) && (b == fcdofs[cind])) {

5090

indices[ind] = -(foff+b+1);

5091

++cind;

5092

} else {

5093

indices[ind] = foff+b-cind;

5094

}

5095

}

5096

}

5097

foffs[f] += fdof;

5098

}

5099

5100

}

5101

5102

PetscErrorCode DMPlexAnchorsModifyMat(DM dm, PetscSection section, PetscInt numPoints, PetscInt numIndices, const PetscInt points[], const PetscInt ***perms, const PetscScalar values[], PetscInt *outNumPoints, PetscInt *outNumIndices, PetscInt *outPoints[], PetscScalar *outValues[], PetscInt offsets[], PetscBool multiplyLeft)

5103

{

5104

Mat cMat;

5105

PetscSection aSec, cSec;

5106

IS aIS;

5107

PetscInt aStart = -1, aEnd = -1;

5108

const PetscInt *anchors;

5109

PetscInt numFields, f, p, q, newP = 0;

5110

PetscInt newNumPoints = 0, newNumIndices = 0;

5111

PetscInt *newPoints, *indices, *newIndices;

5112

PetscInt maxAnchor, maxDof;

5113

PetscInt newOffsets[32];

5114

PetscInt *pointMatOffsets[32];

5115

PetscInt *newPointOffsets[32];

5116

PetscScalar *pointMat[32];

5117

PetscScalar *newValues=NULL((void*)0),*tmpValues;

5118

PetscBool anyConstrained = PETSC_FALSE;

5119

PetscErrorCode ierr;

5120

5121

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 5121; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

5122

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),5122,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),5122,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),5122,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),5122,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

5123

PetscValidHeaderSpecific(section, PETSC_SECTION_CLASSID, 2)do { if (!section) return PetscError(((MPI_Comm)0x44000001),5123
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (
!PetscCheckPointer(section,PETSC_OBJECT)) return PetscError((
(MPI_Comm)0x44000001),5123,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(section))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(section))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),5123,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),5123,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",2); } } while (0);

5124

ierr = PetscSectionGetNumFields(section, &numFields);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5124,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5125

5126

ierr = DMPlexGetAnchors(dm,&aSec,&aIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5126,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5127

/* if there are point-to-point constraints */

5128

if (aSec) {

5129

ierr = PetscArrayzero(newOffsets, 32)PetscMemzero(newOffsets,(32)*sizeof(*(newOffsets)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5129,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5130

ierr = ISGetIndices(aIS,&anchors);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5130,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5131

ierr = PetscSectionGetChart(aSec,&aStart,&aEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5131,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5132

/* figure out how many points are going to be in the new element matrix

5133

* (we allow double counting, because it's all just going to be summed

5134

* into the global matrix anyway) */

5135

for (p = 0; p < 2*numPoints; p+=2) {

5136

PetscInt b = points[p];

5137

PetscInt bDof = 0, bSecDof;

5138

5139

ierr = PetscSectionGetDof(section,b,&bSecDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5139,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5140

if (!bSecDof) {

5141

continue;

5142

}

5143

if (b >= aStart && b < aEnd) {

5144

ierr = PetscSectionGetDof(aSec,b,&bDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5144,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5145

}

5146

if (bDof) {

5147

/* this point is constrained */

5148

/* it is going to be replaced by its anchors */

5149

PetscInt bOff, q;

5150

5151

anyConstrained = PETSC_TRUE;

5152

newNumPoints += bDof;

5153

ierr = PetscSectionGetOffset(aSec,b,&bOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5153,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5154

for (q = 0; q < bDof; q++) {

5155

PetscInt a = anchors[bOff + q];

5156

PetscInt aDof;

5157

5158

ierr = PetscSectionGetDof(section,a,&aDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5158,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5159

newNumIndices += aDof;

5160

for (f = 0; f < numFields; ++f) {

5161

PetscInt fDof;

5162

5163

ierr = PetscSectionGetFieldDof(section, a, f, &fDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5163,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5164

newOffsets[f+1] += fDof;

5165

}

5166

}

5167

}

5168

else {

5169

/* this point is not constrained */

5170

newNumPoints++;

5171

newNumIndices += bSecDof;

5172

for (f = 0; f < numFields; ++f) {

5173

PetscInt fDof;

5174

5175

ierr = PetscSectionGetFieldDof(section, b, f, &fDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5175,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5176

newOffsets[f+1] += fDof;

5177

}

5178

}

5179

}

5180

}

5181

if (!anyConstrained) {

5182

if (outNumPoints) *outNumPoints = 0;

5183

if (outNumIndices) *outNumIndices = 0;

5184

if (outPoints) *outPoints = NULL((void*)0);

5185

if (outValues) *outValues = NULL((void*)0);

5186

if (aSec) {ierr = ISRestoreIndices(aIS,&anchors);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5186,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5187

5188

}

5189

5190

if (outNumPoints) *outNumPoints = newNumPoints;

5191

if (outNumIndices) *outNumIndices = newNumIndices;

5192

5193

for (f = 0; f < numFields; ++f) newOffsets[f+1] += newOffsets[f];

5194

5195

if (!outPoints && !outValues) {

5196

if (offsets) {

5197

for (f = 0; f <= numFields; f++) {

5198

offsets[f] = newOffsets[f];

5199

}

5200

}

5201

if (aSec) {ierr = ISRestoreIndices(aIS,&anchors);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5201,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5202

5203

}

5204

5205

if (numFields && newOffsets[numFields] != newNumIndices) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_PLIB, "Invalid size for closure %D should be %D", newOffsets[numFields], newNumIndices)return PetscError(((MPI_Comm)0x44000001),5205,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,77,PETSC_ERROR_INITIAL,"Invalid size for closure %D should be %D"
,newOffsets[numFields],newNumIndices);

5206

5207

ierr = DMGetDefaultConstraints(dm, &cSec, &cMat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5207,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5208

5209

/* workspaces */

5210

if (numFields) {

5211

for (f = 0; f < numFields; f++) {

5212

ierr = DMGetWorkArray(dm,numPoints+1,MPIU_INT((MPI_Datatype)0x4c000405),&pointMatOffsets[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5212,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5213

ierr = DMGetWorkArray(dm,numPoints+1,MPIU_INT((MPI_Datatype)0x4c000405),&newPointOffsets[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5213,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5214

}

5215

}

5216

else {

5217

ierr = DMGetWorkArray(dm,numPoints+1,MPIU_INT((MPI_Datatype)0x4c000405),&pointMatOffsets[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5217,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5218

ierr = DMGetWorkArray(dm,numPoints,MPIU_INT((MPI_Datatype)0x4c000405),&newPointOffsets[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5218,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5219

}

5220

5221

/* get workspaces for the point-to-point matrices */

5222

if (numFields) {

5223

PetscInt totalOffset, totalMatOffset;

5224

5225

for (p = 0; p < numPoints; p++) {

5226

PetscInt b = points[2*p];

5227

PetscInt bDof = 0, bSecDof;

5228

5229

ierr = PetscSectionGetDof(section,b,&bSecDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5229,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5230

if (!bSecDof) {

5231

for (f = 0; f < numFields; f++) {

5232

newPointOffsets[f][p + 1] = 0;

5233

pointMatOffsets[f][p + 1] = 0;

5234

}

5235

continue;

5236

}

5237

if (b >= aStart && b < aEnd) {

5238

ierr = PetscSectionGetDof(aSec, b, &bDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5238,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5239

}

5240

if (bDof) {

5241

for (f = 0; f < numFields; f++) {

5242

PetscInt fDof, q, bOff, allFDof = 0;

5243

5244

ierr = PetscSectionGetFieldDof(section, b, f, &fDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5244,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5245

ierr = PetscSectionGetOffset(aSec, b, &bOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5245,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5246

for (q = 0; q < bDof; q++) {

5247

PetscInt a = anchors[bOff + q];

5248

PetscInt aFDof;

5249

5250

ierr = PetscSectionGetFieldDof(section, a, f, &aFDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5250,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5251

allFDof += aFDof;

5252

}

5253

newPointOffsets[f][p+1] = allFDof;

5254

pointMatOffsets[f][p+1] = fDof * allFDof;

5255

}

5256

}

5257

else {

5258

for (f = 0; f < numFields; f++) {

5259

PetscInt fDof;

5260

5261

ierr = PetscSectionGetFieldDof(section, b, f, &fDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5261,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5262

newPointOffsets[f][p+1] = fDof;

5263

pointMatOffsets[f][p+1] = 0;

5264

}

5265

}

5266

}

5267

for (f = 0, totalOffset = 0, totalMatOffset = 0; f < numFields; f++) {

5268

newPointOffsets[f][0] = totalOffset;

5269

pointMatOffsets[f][0] = totalMatOffset;

5270

for (p = 0; p < numPoints; p++) {

5271

newPointOffsets[f][p+1] += newPointOffsets[f][p];

5272

pointMatOffsets[f][p+1] += pointMatOffsets[f][p];

5273

}

5274

totalOffset = newPointOffsets[f][numPoints];

5275

totalMatOffset = pointMatOffsets[f][numPoints];

5276

ierr = DMGetWorkArray(dm,pointMatOffsets[f][numPoints],MPIU_SCALAR((MPI_Datatype)0x4c00080b),&pointMat[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5276,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5277

}

5278

}

5279

else {

5280

for (p = 0; p < numPoints; p++) {

5281

PetscInt b = points[2*p];

5282

PetscInt bDof = 0, bSecDof;

5283

5284

ierr = PetscSectionGetDof(section,b,&bSecDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5284,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5285

if (!bSecDof) {

5286

newPointOffsets[0][p + 1] = 0;

5287

pointMatOffsets[0][p + 1] = 0;

5288

continue;

5289

}

5290

if (b >= aStart && b < aEnd) {

5291

ierr = PetscSectionGetDof(aSec, b, &bDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5291,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5292

}

5293

if (bDof) {

5294

PetscInt bOff, q, allDof = 0;

5295

5296

ierr = PetscSectionGetOffset(aSec, b, &bOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5296,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5297

for (q = 0; q < bDof; q++) {

5298

PetscInt a = anchors[bOff + q], aDof;

5299

5300

ierr = PetscSectionGetDof(section, a, &aDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5300,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5301

allDof += aDof;

5302

}

5303

newPointOffsets[0][p+1] = allDof;

5304

pointMatOffsets[0][p+1] = bSecDof * allDof;

5305

}

5306

else {

5307

newPointOffsets[0][p+1] = bSecDof;

5308

pointMatOffsets[0][p+1] = 0;

5309

}

5310

}

5311

newPointOffsets[0][0] = 0;

5312

pointMatOffsets[0][0] = 0;

5313

for (p = 0; p < numPoints; p++) {

5314

newPointOffsets[0][p+1] += newPointOffsets[0][p];

5315

pointMatOffsets[0][p+1] += pointMatOffsets[0][p];

5316

}

5317

ierr = DMGetWorkArray(dm,pointMatOffsets[0][numPoints],MPIU_SCALAR((MPI_Datatype)0x4c00080b),&pointMat[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5317,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5318

}

5319

5320

/* output arrays */

5321

ierr = DMGetWorkArray(dm,2*newNumPoints,MPIU_INT((MPI_Datatype)0x4c000405),&newPoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5321,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5322

5323

/* get the point-to-point matrices; construct newPoints */

5324

ierr = PetscSectionGetMaxDof(aSec, &maxAnchor);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5324,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5325

ierr = PetscSectionGetMaxDof(section, &maxDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5325,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5326

ierr = DMGetWorkArray(dm,maxDof,MPIU_INT((MPI_Datatype)0x4c000405),&indices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5326,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5327

ierr = DMGetWorkArray(dm,maxAnchor*maxDof,MPIU_INT((MPI_Datatype)0x4c000405),&newIndices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5327,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5328

if (numFields) {

5329

for (p = 0, newP = 0; p < numPoints; p++) {

5330

PetscInt b = points[2*p];

5331

PetscInt o = points[2*p+1];

5332

PetscInt bDof = 0, bSecDof;

5333

5334

ierr = PetscSectionGetDof(section, b, &bSecDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5334,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5335

if (!bSecDof) {

5336

continue;

5337

}

5338

if (b >= aStart && b < aEnd) {

5339

ierr = PetscSectionGetDof(aSec, b, &bDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5339,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5340

}

5341

if (bDof) {

5342

PetscInt fStart[32], fEnd[32], fAnchorStart[32], fAnchorEnd[32], bOff, q;

5343

5344

fStart[0] = 0;

5345

fEnd[0] = 0;

5346

for (f = 0; f < numFields; f++) {

5347

PetscInt fDof;

5348

5349

ierr = PetscSectionGetFieldDof(cSec, b, f, &fDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5349,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5350

fStart[f+1] = fStart[f] + fDof;

5351

fEnd[f+1] = fStart[f+1];

5352

}

5353

ierr = PetscSectionGetOffset(cSec, b, &bOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5353,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5354

ierr = DMPlexGetIndicesPointFields_Internal(cSec, b, bOff, fEnd, PETSC_TRUE, perms, p, NULL((void*)0), indices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5354,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5355

5356

fAnchorStart[0] = 0;

5357

fAnchorEnd[0] = 0;

5358

for (f = 0; f < numFields; f++) {

5359

PetscInt fDof = newPointOffsets[f][p + 1] - newPointOffsets[f][p];

5360

5361

fAnchorStart[f+1] = fAnchorStart[f] + fDof;

5362

fAnchorEnd[f+1] = fAnchorStart[f + 1];

5363

}

5364

ierr = PetscSectionGetOffset(aSec, b, &bOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5364,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5365

for (q = 0; q < bDof; q++) {

5366

PetscInt a = anchors[bOff + q], aOff;

5367

5368

/* we take the orientation of ap into account in the order that we constructed the indices above: the newly added points have no orientation */

5369

newPoints[2*(newP + q)] = a;

5370

newPoints[2*(newP + q) + 1] = 0;

5371

ierr = PetscSectionGetOffset(section, a, &aOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5371,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5372

ierr = DMPlexGetIndicesPointFields_Internal(section, a, aOff, fAnchorEnd, PETSC_TRUE, NULL((void*)0), -1, NULL((void*)0), newIndices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5372,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5373

}

5374

newP += bDof;

5375

5376

if (outValues) {

5377

/* get the point-to-point submatrix */

5378

for (f = 0; f < numFields; f++) {

5379

ierr = MatGetValues(cMat,fEnd[f]-fStart[f],indices + fStart[f],fAnchorEnd[f] - fAnchorStart[f],newIndices + fAnchorStart[f],pointMat[f] + pointMatOffsets[f][p]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5379,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5380

}

5381

}

5382

}

5383

else {

5384

newPoints[2 * newP] = b;

5385

newPoints[2 * newP + 1] = o;

5386

newP++;

5387

}

5388

}

5389

} else {

5390

for (p = 0; p < numPoints; p++) {

5391

PetscInt b = points[2*p];

5392

PetscInt o = points[2*p+1];

5393

PetscInt bDof = 0, bSecDof;

5394

5395

ierr = PetscSectionGetDof(section, b, &bSecDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5395,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5396

if (!bSecDof) {

5397

continue;

5398

}

5399

if (b >= aStart && b < aEnd) {

5400

ierr = PetscSectionGetDof(aSec, b, &bDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5400,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5401

}

5402

if (bDof) {

5403

PetscInt bEnd = 0, bAnchorEnd = 0, bOff;

5404

5405

ierr = PetscSectionGetOffset(cSec, b, &bOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5405,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5406

ierr = DMPlexGetIndicesPoint_Internal(cSec, b, bOff, &bEnd, PETSC_TRUE, (perms && perms[0]) ? perms[0][p] : NULL((void*)0), NULL((void*)0), indices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5406,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5407

5408

ierr = PetscSectionGetOffset (aSec, b, &bOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5408,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5409

for (q = 0; q < bDof; q++) {

5410

PetscInt a = anchors[bOff + q], aOff;

5411

5412

/* we take the orientation of ap into account in the order that we constructed the indices above: the newly added points have no orientation */

5413

5414

newPoints[2*(newP + q)] = a;

5415

newPoints[2*(newP + q) + 1] = 0;

5416

ierr = PetscSectionGetOffset(section, a, &aOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5416,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5417

ierr = DMPlexGetIndicesPoint_Internal(section, a, aOff, &bAnchorEnd, PETSC_TRUE, NULL((void*)0), NULL((void*)0), newIndices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5417,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5418

}

5419

newP += bDof;

5420

5421

/* get the point-to-point submatrix */

5422

if (outValues) {

5423

ierr = MatGetValues(cMat,bEnd,indices,bAnchorEnd,newIndices,pointMat[0] + pointMatOffsets[0][p]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5423,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5424

}

5425

}

5426

else {

5427

newPoints[2 * newP] = b;

5428

newPoints[2 * newP + 1] = o;

5429

newP++;

5430

}

5431

}

5432

}

5433

5434

if (outValues) {

5435

ierr = DMGetWorkArray(dm,newNumIndices*numIndices,MPIU_SCALAR((MPI_Datatype)0x4c00080b),&tmpValues);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5435,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5436

ierr = PetscArrayzero(tmpValues,newNumIndices*numIndices)PetscMemzero(tmpValues,(newNumIndices*numIndices)*sizeof(*(tmpValues
)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5436,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5437

/* multiply constraints on the right */

5438

if (numFields) {

5439

for (f = 0; f < numFields; f++) {

5440

PetscInt oldOff = offsets[f];

5441

5442

for (p = 0; p < numPoints; p++) {

5443

PetscInt cStart = newPointOffsets[f][p];

5444

PetscInt b = points[2 * p];

5445

PetscInt c, r, k;

5446

PetscInt dof;

5447

5448

ierr = PetscSectionGetFieldDof(section,b,f,&dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5448,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5449

if (!dof) {

5450

continue;

5451

}

5452

if (pointMatOffsets[f][p] < pointMatOffsets[f][p + 1]) {

5453

PetscInt nCols = newPointOffsets[f][p+1]-cStart;

5454

const PetscScalar *mat = pointMat[f] + pointMatOffsets[f][p];

5455

5456

for (r = 0; r < numIndices; r++) {

5457

for (c = 0; c < nCols; c++) {

5458

for (k = 0; k < dof; k++) {

5459

tmpValues[r * newNumIndices + cStart + c] += values[r * numIndices + oldOff + k] * mat[k * nCols + c];

5460

}

5461

}

5462

}

5463

}

5464

else {

5465

/* copy this column as is */

5466

for (r = 0; r < numIndices; r++) {

5467

for (c = 0; c < dof; c++) {

5468

tmpValues[r * newNumIndices + cStart + c] = values[r * numIndices + oldOff + c];

5469

}

5470

}

5471

}

5472

oldOff += dof;

5473

}

5474

}

5475

}

5476

else {

5477

PetscInt oldOff = 0;

5478

for (p = 0; p < numPoints; p++) {

5479

PetscInt cStart = newPointOffsets[0][p];

5480

PetscInt b = points[2 * p];

5481

PetscInt c, r, k;

5482

PetscInt dof;

5483

5484

ierr = PetscSectionGetDof(section,b,&dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5484,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5485

if (!dof) {

5486

continue;

5487

}

5488

if (pointMatOffsets[0][p] < pointMatOffsets[0][p + 1]) {

5489

PetscInt nCols = newPointOffsets[0][p+1]-cStart;

5490

const PetscScalar *mat = pointMat[0] + pointMatOffsets[0][p];

5491

5492

for (r = 0; r < numIndices; r++) {

5493

for (c = 0; c < nCols; c++) {

5494

for (k = 0; k < dof; k++) {

5495

tmpValues[r * newNumIndices + cStart + c] += mat[k * nCols + c] * values[r * numIndices + oldOff + k];

5496

}

5497

}

5498

}

5499

}

5500

else {

5501

/* copy this column as is */

5502

for (r = 0; r < numIndices; r++) {

5503

for (c = 0; c < dof; c++) {

5504

tmpValues[r * newNumIndices + cStart + c] = values[r * numIndices + oldOff + c];

5505

}

5506

}

5507

}

5508

oldOff += dof;

5509

}

5510

}

5511

5512

if (multiplyLeft) {

5513

ierr = DMGetWorkArray(dm,newNumIndices*newNumIndices,MPIU_SCALAR((MPI_Datatype)0x4c00080b),&newValues);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5513,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5514

ierr = PetscArrayzero(newValues,newNumIndices*newNumIndices)PetscMemzero(newValues,(newNumIndices*newNumIndices)*sizeof(*
(newValues)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5514,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5515

/* multiply constraints transpose on the left */

5516

if (numFields) {

5517

for (f = 0; f < numFields; f++) {

5518

PetscInt oldOff = offsets[f];

5519

5520

for (p = 0; p < numPoints; p++) {

5521

PetscInt rStart = newPointOffsets[f][p];

5522

PetscInt b = points[2 * p];

5523

PetscInt c, r, k;

5524

PetscInt dof;

5525

5526

ierr = PetscSectionGetFieldDof(section,b,f,&dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5526,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5527

if (pointMatOffsets[f][p] < pointMatOffsets[f][p + 1]) {

5528

PetscInt nRows = newPointOffsets[f][p+1]-rStart;

5529

const PetscScalar *PETSC_RESTRICT__restrict mat = pointMat[f] + pointMatOffsets[f][p];

5530

5531

for (r = 0; r < nRows; r++) {

5532

for (c = 0; c < newNumIndices; c++) {

5533

for (k = 0; k < dof; k++) {

5534

newValues[(rStart + r) * newNumIndices + c] += mat[k * nRows + r] * tmpValues[(oldOff + k) * newNumIndices + c];

5535

}

5536

}

5537

}

5538

}

5539

else {

5540

/* copy this row as is */

5541

for (r = 0; r < dof; r++) {

5542

for (c = 0; c < newNumIndices; c++) {

5543

newValues[(rStart + r) * newNumIndices + c] = tmpValues[(oldOff + r) * newNumIndices + c];

5544

}

5545

}

5546

}

5547

oldOff += dof;

5548

}

5549

}

5550

}

5551

else {

5552

PetscInt oldOff = 0;

5553

5554

for (p = 0; p < numPoints; p++) {

5555

PetscInt rStart = newPointOffsets[0][p];

5556

PetscInt b = points[2 * p];

5557

PetscInt c, r, k;

5558

PetscInt dof;

5559

5560

ierr = PetscSectionGetDof(section,b,&dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5560,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5561

if (pointMatOffsets[0][p] < pointMatOffsets[0][p + 1]) {

5562

PetscInt nRows = newPointOffsets[0][p+1]-rStart;

5563

const PetscScalar *PETSC_RESTRICT__restrict mat = pointMat[0] + pointMatOffsets[0][p];

5564

5565

for (r = 0; r < nRows; r++) {

5566

for (c = 0; c < newNumIndices; c++) {

5567

for (k = 0; k < dof; k++) {

5568

newValues[(rStart + r) * newNumIndices + c] += mat[k * nRows + r] * tmpValues[(oldOff + k) * newNumIndices + c];

5569

}

5570

}

5571

}

5572

}

5573

else {

5574

/* copy this row as is */

5575

for (r = 0; r < dof; r++) {

5576

for (c = 0; c < newNumIndices; c++) {

5577

newValues[(rStart + r) * newNumIndices + c] = tmpValues[(oldOff + r) * newNumIndices + c];

5578

}

5579

}

5580

}

5581

oldOff += dof;

5582

}

5583

}

5584

5585

ierr = DMRestoreWorkArray(dm,newNumIndices*numIndices,MPIU_SCALAR((MPI_Datatype)0x4c00080b),&tmpValues);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5585,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5586

}

5587

else {

5588

newValues = tmpValues;

5589

}

5590

}

5591

5592

/* clean up */

5593

ierr = DMRestoreWorkArray(dm,maxDof,MPIU_INT((MPI_Datatype)0x4c000405),&indices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5593,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5594

ierr = DMRestoreWorkArray(dm,maxAnchor*maxDof,MPIU_INT((MPI_Datatype)0x4c000405),&newIndices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5594,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5595

5596

if (numFields) {

5597

for (f = 0; f < numFields; f++) {

5598

ierr = DMRestoreWorkArray(dm,pointMatOffsets[f][numPoints],MPIU_SCALAR((MPI_Datatype)0x4c00080b),&pointMat[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5598,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5599

ierr = DMRestoreWorkArray(dm,numPoints+1,MPIU_INT((MPI_Datatype)0x4c000405),&pointMatOffsets[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5599,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5600

ierr = DMRestoreWorkArray(dm,numPoints+1,MPIU_INT((MPI_Datatype)0x4c000405),&newPointOffsets[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5600,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5601

}

5602

}

5603

else {

5604

ierr = DMRestoreWorkArray(dm,pointMatOffsets[0][numPoints],MPIU_SCALAR((MPI_Datatype)0x4c00080b),&pointMat[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5604,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5605

ierr = DMRestoreWorkArray(dm,numPoints+1,MPIU_INT((MPI_Datatype)0x4c000405),&pointMatOffsets[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5605,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5606

ierr = DMRestoreWorkArray(dm,numPoints+1,MPIU_INT((MPI_Datatype)0x4c000405),&newPointOffsets[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5606,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5607

}

5608

ierr = ISRestoreIndices(aIS,&anchors);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5608,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5609

5610

/* output */

5611

if (outPoints) {

5612

*outPoints = newPoints;

5613

}

5614

else {

5615

ierr = DMRestoreWorkArray(dm,2*newNumPoints,MPIU_INT((MPI_Datatype)0x4c000405),&newPoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5615,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5616

}

5617

if (outValues) {

5618

*outValues = newValues;

5619

}

5620

for (f = 0; f <= numFields; f++) {

5621

offsets[f] = newOffsets[f];

5622

}

5623

5624

}

5625

5626

/*@C

5627

DMPlexGetClosureIndices - Get the global indices in a vector v for all points in the closure of the given point

5628

5629

Not collective

5630

5631

Input Parameters:

5632

+ dm - The DM

5633

. section - The section describing the layout in v, or NULL to use the default section

5634

. globalSection - The section describing the parallel layout in v, or NULL to use the default section

5635

- point - The mesh point

5636

5637

Output parameters:

5638

+ numIndices - The number of indices

5639

. indices - The indices

5640

- outOffsets - Field offset if not NULL

5641

5642

Note: Must call DMPlexRestoreClosureIndices() to free allocated memory

5643

5644

Level: advanced

5645

5646

.seealso DMPlexRestoreClosureIndices(), DMPlexVecGetClosure(), DMPlexMatSetClosure()

5647

@*/

5648

PetscErrorCode DMPlexGetClosureIndices(DM dm, PetscSection section, PetscSection globalSection, PetscInt point, PetscInt *numIndices, PetscInt **indices, PetscInt *outOffsets)

5649

{

5650

PetscSection clSection;

5651

IS clPoints;

5652

const PetscInt *clp, *clperm;

5653

const PetscInt **perms[32] = {NULL((void*)0)};

5654

PetscInt *points = NULL((void*)0), *pointsNew;

5655

PetscInt numPoints, numPointsNew;

5656

PetscInt offsets[32];

5657

PetscInt Nf, Nind, NindNew, off, globalOff, f, p;

5658

PetscErrorCode ierr;

5659

5660

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 5660; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

5661

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),5661,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),5661,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),5661,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),5661,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

5662

PetscValidHeaderSpecific(section, PETSC_SECTION_CLASSID, 2)do { if (!section) return PetscError(((MPI_Comm)0x44000001),5662
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (
!PetscCheckPointer(section,PETSC_OBJECT)) return PetscError((
(MPI_Comm)0x44000001),5662,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(section))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(section))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),5662,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),5662,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",2); } } while (0);

5663

PetscValidHeaderSpecific(globalSection, PETSC_SECTION_CLASSID, 3)do { if (!globalSection) return PetscError(((MPI_Comm)0x44000001
),5663,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",3); if (
!PetscCheckPointer(globalSection,PETSC_OBJECT)) return PetscError
(((MPI_Comm)0x44000001),5663,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,3); if (((PetscObject)(globalSection))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(globalSection))->classid == -1) return
PetscError(((MPI_Comm)0x44000001),5663,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,3); else return PetscError(((MPI_Comm)0x44000001),5663,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",3); } } while (0);

5664

if (numIndices) PetscValidPointer(numIndices, 4)do { if (!numIndices) return PetscError(((MPI_Comm)0x44000001
),5664,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",4); if
(!PetscCheckPointer(numIndices,PETSC_CHAR)) return PetscError
(((MPI_Comm)0x44000001),5664,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",4);
} while (0);

5665

PetscValidPointer(indices, 5)do { if (!indices) return PetscError(((MPI_Comm)0x44000001),5665
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",5); if
(!PetscCheckPointer(indices,PETSC_CHAR)) return PetscError((
(MPI_Comm)0x44000001),5665,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",5);
} while (0);

5666

ierr = PetscSectionGetNumFields(section, &Nf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5666,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5667

if (Nf > 31) SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Number of fields %D limited to 31", Nf)return PetscError(PetscObjectComm((PetscObject)dm),5667,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Number of fields %D limited to 31",Nf);

5668

ierr = PetscArrayzero(offsets, 32)PetscMemzero(offsets,(32)*sizeof(*(offsets)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5668,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5669

/* Get points in closure */

5670

ierr = DMPlexGetCompressedClosure(dm,section,point,&numPoints,&points,&clSection,&clPoints,&clp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5670,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5671

ierr = PetscSectionGetClosureInversePermutation_Internal(section, (PetscObject) dm, NULL((void*)0), &clperm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5671,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5672

/* Get number of indices and indices per field */

5673

for (p = 0, Nind = 0; p < numPoints*2; p += 2) {

5674

PetscInt dof, fdof;

5675

5676

ierr = PetscSectionGetDof(section, points[p], &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5676,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5677

for (f = 0; f < Nf; ++f) {

5678

ierr = PetscSectionGetFieldDof(section, points[p], f, &fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5678,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5679

offsets[f+1] += fdof;

5680

}

5681

Nind += dof;

5682

}

5683

for (f = 1; f < Nf; ++f) offsets[f+1] += offsets[f];

5684

if (Nf && offsets[Nf] != Nind) SETERRQ2(PetscObjectComm((PetscObject) dm), PETSC_ERR_PLIB, "Invalid size for closure %D should be %D", offsets[Nf], Nind)return PetscError(PetscObjectComm((PetscObject) dm),5684,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",77,PETSC_ERROR_INITIAL
,"Invalid size for closure %D should be %D",offsets[Nf],Nind);

5685

if (!Nf) offsets[1] = Nind;

5686

/* Get dual space symmetries */

5687

for (f = 0; f < PetscMax(1,Nf)(((1)<(Nf)) ? (Nf) : (1)); f++) {

5688

if (Nf) {ierr = PetscSectionGetFieldPointSyms(section,f,numPoints,points,&perms[f],NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5688,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5689

else {ierr = PetscSectionGetPointSyms(section,numPoints,points,&perms[f],NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5689,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5690

}

5691

/* Correct for hanging node constraints */

5692

{

5693

ierr = DMPlexAnchorsModifyMat(dm, section, numPoints, Nind, points, perms, NULL((void*)0), &numPointsNew, &NindNew, &pointsNew, NULL((void*)0), offsets, PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5693,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5694

if (numPointsNew) {

5695

for (f = 0; f < PetscMax(1,Nf)(((1)<(Nf)) ? (Nf) : (1)); f++) {

5696

if (Nf) {ierr = PetscSectionRestoreFieldPointSyms(section,f,numPoints,points,&perms[f],NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5696,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5697

else {ierr = PetscSectionRestorePointSyms(section,numPoints,points,&perms[f],NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5697,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5698

}

5699

for (f = 0; f < PetscMax(1,Nf)(((1)<(Nf)) ? (Nf) : (1)); f++) {

5700

if (Nf) {ierr = PetscSectionGetFieldPointSyms(section,f,numPointsNew,pointsNew,&perms[f],NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5700,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5701

else {ierr = PetscSectionGetPointSyms(section,numPointsNew,pointsNew,&perms[f],NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5701,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5702

}

5703

ierr = DMPlexRestoreCompressedClosure(dm,section,point,&numPoints,&points,&clSection,&clPoints,&clp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5703,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5704

numPoints = numPointsNew;

5705

Nind = NindNew;

5706

points = pointsNew;

5707

}

5708

}

5709

/* Calculate indices */

5710

ierr = DMGetWorkArray(dm, Nind, MPIU_INT((MPI_Datatype)0x4c000405), indices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5710,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5711

if (Nf) {

5712

if (outOffsets) {

5713

PetscInt f;

5714

5715

for (f = 0; f <= Nf; f++) {

5716

outOffsets[f] = offsets[f];

5717

}

5718

}

5719

for (p = 0; p < numPoints; p++) {

5720

ierr = PetscSectionGetOffset(globalSection, points[2*p], &globalOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5720,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5721

DMPlexGetIndicesPointFields_Internal(section, points[2*p], globalOff < 0 ? -(globalOff+1) : globalOff, offsets, PETSC_FALSE, perms, p, clperm, *indices);

5722

}

5723

} else {

5724

for (p = 0, off = 0; p < numPoints; p++) {

5725

const PetscInt *perm = perms[0] ? perms[0][p] : NULL((void*)0);

5726

5727

ierr = PetscSectionGetOffset(globalSection, points[2*p], &globalOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5727,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5728

DMPlexGetIndicesPoint_Internal(section, points[2*p], globalOff < 0 ? -(globalOff+1) : globalOff, &off, PETSC_FALSE, perm, clperm, *indices);

5729

}

5730

}

5731

/* Cleanup points */

5732

for (f = 0; f < PetscMax(1,Nf)(((1)<(Nf)) ? (Nf) : (1)); f++) {

5733

if (Nf) {ierr = PetscSectionRestoreFieldPointSyms(section,f,numPoints,points,&perms[f],NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5733,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5734

else {ierr = PetscSectionRestorePointSyms(section,numPoints,points,&perms[f],NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5734,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5735

}

5736

if (numPointsNew) {

5737

ierr = DMRestoreWorkArray(dm, 2*numPointsNew, MPIU_INT((MPI_Datatype)0x4c000405), &pointsNew);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5737,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5738

} else {

5739

ierr = DMPlexRestoreCompressedClosure(dm,section,point,&numPoints,&points,&clSection,&clPoints,&clp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5739,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5740

}

5741

if (numIndices) *numIndices = Nind;

5742

5743

}

5744

5745

/*@C

5746

DMPlexRestoreClosureIndices - Restore the indices in a vector v for all points in the closure of the given point

5747

5748

Not collective

5749

5750

Input Parameters:

5751

+ dm - The DM

5752

. section - The section describing the layout in v, or NULL to use the default section

5753

. globalSection - The section describing the parallel layout in v, or NULL to use the default section

5754

. point - The mesh point

5755

. numIndices - The number of indices

5756

. indices - The indices

5757

- outOffsets - Field offset if not NULL

5758

5759

Level: advanced

5760

5761

.seealso DMPlexGetClosureIndices(), DMPlexVecGetClosure(), DMPlexMatSetClosure()

5762

@*/

5763

PetscErrorCode DMPlexRestoreClosureIndices(DM dm, PetscSection section, PetscSection globalSection, PetscInt point, PetscInt *numIndices, PetscInt **indices,PetscInt *outOffsets)

5764

{

5765

PetscErrorCode ierr;

5766

5767

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 5767; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

5768

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),5768,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),5768,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),5768,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),5768,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

5769

PetscValidPointer(indices, 5)do { if (!indices) return PetscError(((MPI_Comm)0x44000001),5769
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",5); if
(!PetscCheckPointer(indices,PETSC_CHAR)) return PetscError((
(MPI_Comm)0x44000001),5769,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",5);
} while (0);

5770

ierr = DMRestoreWorkArray(dm, 0, MPIU_INT((MPI_Datatype)0x4c000405), indices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5770,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5771

5772

}

5773

5774

/*@C

5775

DMPlexMatSetClosure - Set an array of the values on the closure of 'point'

5776

5777

Not collective

5778

5779

Input Parameters:

5780

+ dm - The DM

5781

. section - The section describing the layout in v, or NULL to use the default section

5782

. globalSection - The section describing the layout in v, or NULL to use the default global section

5783

. A - The matrix

5784

. point - The point in the DM

5785

. values - The array of values

5786

- mode - The insert mode, where INSERT_ALL_VALUES and ADD_ALL_VALUES also overwrite boundary conditions

5787

5788

Fortran Notes:

5789

This routine is only available in Fortran 90, and you must include petsc.h90 in your code.

5790

5791

Level: intermediate

5792

5793

.seealso DMPlexVecGetClosure(), DMPlexVecSetClosure()

5794

@*/

5795

PetscErrorCode DMPlexMatSetClosure(DM dm, PetscSection section, PetscSection globalSection, Mat A, PetscInt point, const PetscScalar values[], InsertMode mode)

5796

{

5797

DM_Plex *mesh = (DM_Plex*) dm->data;

5798

PetscSection clSection;

5799

IS clPoints;

5800

PetscInt *points = NULL((void*)0), *newPoints;

5801

const PetscInt *clp, *clperm;

5802

PetscInt *indices;

5803

PetscInt offsets[32];

5804

const PetscInt **perms[32] = {NULL((void*)0)};

5805

const PetscScalar **flips[32] = {NULL((void*)0)};

5806

PetscInt numFields, numPoints, newNumPoints, numIndices, newNumIndices, dof, off, globalOff, p, f;

5807

PetscScalar *valCopy = NULL((void*)0);

5808

PetscScalar *newValues;

5809

PetscErrorCode ierr;

5810

5811

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 5811; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

5812

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),5812,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),5812,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),5812,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),5812,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

5813

if (!section) {ierr = DMGetSection(dm, &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5813,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5814

PetscValidHeaderSpecific(section, PETSC_SECTION_CLASSID, 2)do { if (!section) return PetscError(((MPI_Comm)0x44000001),5814
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (
!PetscCheckPointer(section,PETSC_OBJECT)) return PetscError((
(MPI_Comm)0x44000001),5814,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(section))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(section))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),5814,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),5814,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",2); } } while (0);

5815

if (!globalSection) {ierr = DMGetGlobalSection(dm, &globalSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5815,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5816

PetscValidHeaderSpecific(globalSection, PETSC_SECTION_CLASSID, 3)do { if (!globalSection) return PetscError(((MPI_Comm)0x44000001
),5816,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",3); if (
!PetscCheckPointer(globalSection,PETSC_OBJECT)) return PetscError
(((MPI_Comm)0x44000001),5816,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,3); if (((PetscObject)(globalSection))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(globalSection))->classid == -1) return
PetscError(((MPI_Comm)0x44000001),5816,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,3); else return PetscError(((MPI_Comm)0x44000001),5816,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",3); } } while (0);

5817

PetscValidHeaderSpecific(A, MAT_CLASSID, 4)do { if (!A) return PetscError(((MPI_Comm)0x44000001),5817,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",4); if (!PetscCheckPointer(A,PETSC_OBJECT
)) return PetscError(((MPI_Comm)0x44000001),5817,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,4); if (((PetscObject)(A))->classid != MAT_CLASSID) { if (
((PetscObject)(A))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),5817,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,4); else return PetscError(((MPI_Comm)0x44000001),5817,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",4); } } while (0);

5818

ierr = PetscSectionGetNumFields(section, &numFields);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5818,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5819

if (numFields > 31) SETERRQ1(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_OUTOFRANGE, "Number of fields %D limited to 31", numFields)return PetscError(PetscObjectComm((PetscObject)dm),5819,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Number of fields %D limited to 31",numFields);

5820

ierr = PetscArrayzero(offsets, 32)PetscMemzero(offsets,(32)*sizeof(*(offsets)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5820,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5821

ierr = PetscSectionGetClosureInversePermutation_Internal(section, (PetscObject) dm, NULL((void*)0), &clperm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5821,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5822

ierr = DMPlexGetCompressedClosure(dm,section,point,&numPoints,&points,&clSection,&clPoints,&clp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5822,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5823

for (p = 0, numIndices = 0; p < numPoints*2; p += 2) {

5824

PetscInt fdof;

5825

5826

ierr = PetscSectionGetDof(section, points[p], &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5826,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5827

for (f = 0; f < numFields; ++f) {

5828

ierr = PetscSectionGetFieldDof(section, points[p], f, &fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5828,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5829

offsets[f+1] += fdof;

5830

}

5831

numIndices += dof;

5832

}

5833

for (f = 1; f < numFields; ++f) offsets[f+1] += offsets[f];

5834

5835

if (numFields && offsets[numFields] != numIndices) SETERRQ2(PetscObjectComm((PetscObject)dm), PETSC_ERR_PLIB, "Invalid size for closure %D should be %D", offsets[numFields], numIndices)return PetscError(PetscObjectComm((PetscObject)dm),5835,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",77,PETSC_ERROR_INITIAL
,"Invalid size for closure %D should be %D",offsets[numFields
],numIndices);

5836

/* Get symmetries */

5837

for (f = 0; f < PetscMax(1,numFields)(((1)<(numFields)) ? (numFields) : (1)); f++) {

5838

if (numFields) {ierr = PetscSectionGetFieldPointSyms(section,f,numPoints,points,&perms[f],&flips[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5838,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5839

else {ierr = PetscSectionGetPointSyms(section,numPoints,points,&perms[f],&flips[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5839,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5840

if (values && flips[f]) { /* may need to apply sign changes to the element matrix */

5841

PetscInt foffset = offsets[f];

5842

5843

for (p = 0; p < numPoints; p++) {

5844

PetscInt point = points[2*p], fdof;

5845

const PetscScalar *flip = flips[f] ? flips[f][p] : NULL((void*)0);

5846

5847

if (!numFields) {

5848

ierr = PetscSectionGetDof(section,point,&fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5848,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5849

} else {

5850

ierr = PetscSectionGetFieldDof(section,point,f,&fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5850,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5851

}

5852

if (flip) {

5853

PetscInt i, j, k;

5854

5855

if (!valCopy) {

5856

ierr = DMGetWorkArray(dm,numIndices*numIndices,MPIU_SCALAR((MPI_Datatype)0x4c00080b),&valCopy);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5856,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5857

for (j = 0; j < numIndices * numIndices; j++) valCopy[j] = values[j];

5858

values = valCopy;

5859

}

5860

for (i = 0; i < fdof; i++) {

5861

PetscScalar fval = flip[i];

5862

5863

for (k = 0; k < numIndices; k++) {

5864

valCopy[numIndices * (foffset + i) + k] *= fval;

5865

valCopy[numIndices * k + (foffset + i)] *= fval;

5866

}

5867

}

5868

}

5869

foffset += fdof;

5870

}

5871

}

5872

}

5873

ierr = DMPlexAnchorsModifyMat(dm,section,numPoints,numIndices,points,perms,values,&newNumPoints,&newNumIndices,&newPoints,&newValues,offsets,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5873,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5874

if (newNumPoints) {

5875

if (valCopy) {

5876

ierr = DMRestoreWorkArray(dm,numIndices*numIndices,MPIU_SCALAR((MPI_Datatype)0x4c00080b),&valCopy);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5876,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5877

}

5878

for (f = 0; f < PetscMax(1,numFields)(((1)<(numFields)) ? (numFields) : (1)); f++) {

5879

if (numFields) {ierr = PetscSectionRestoreFieldPointSyms(section,f,numPoints,points,&perms[f],&flips[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5879,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5880

else {ierr = PetscSectionRestorePointSyms(section,numPoints,points,&perms[f],&flips[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5880,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5881

}

5882

for (f = 0; f < PetscMax(1,numFields)(((1)<(numFields)) ? (numFields) : (1)); f++) {

5883

if (numFields) {ierr = PetscSectionGetFieldPointSyms(section,f,newNumPoints,newPoints,&perms[f],&flips[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5883,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5884

else {ierr = PetscSectionGetPointSyms(section,newNumPoints,newPoints,&perms[f],&flips[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5884,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5885

}

5886

ierr = DMPlexRestoreCompressedClosure(dm,section,point,&numPoints,&points,&clSection,&clPoints,&clp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5886,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5887

numPoints = newNumPoints;

5888

numIndices = newNumIndices;

5889

points = newPoints;

5890

values = newValues;

5891

}

5892

ierr = DMGetWorkArray(dm, numIndices, MPIU_INT((MPI_Datatype)0x4c000405), &indices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5892,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5893

if (numFields) {

5894

PetscBool useFieldOffsets;

5895

5896

ierr = PetscSectionGetUseFieldOffsets(globalSection, &useFieldOffsets);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5896,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5897

if (useFieldOffsets) {

5898

for (p = 0; p < numPoints; p++) {

5899

DMPlexGetIndicesPointFieldsSplit_Internal(section, globalSection, points[2*p], offsets, PETSC_FALSE, perms, p, clperm, indices);

5900

}

5901

} else {

5902

for (p = 0; p < numPoints; p++) {

5903

ierr = PetscSectionGetOffset(globalSection, points[2*p], &globalOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5903,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5904

DMPlexGetIndicesPointFields_Internal(section, points[2*p], globalOff < 0 ? -(globalOff+1) : globalOff, offsets, PETSC_FALSE, perms, p, clperm, indices);

5905

}

5906

}

5907

} else {

5908

for (p = 0, off = 0; p < numPoints; p++) {

5909

const PetscInt *perm = perms[0] ? perms[0][p] : NULL((void*)0);

5910

ierr = PetscSectionGetOffset(globalSection, points[2*p], &globalOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5910,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5911

DMPlexGetIndicesPoint_Internal(section, points[2*p], globalOff < 0 ? -(globalOff+1) : globalOff, &off, PETSC_FALSE, perm, clperm, indices);

5912

}

5913

}

5914

if (mesh->printSetValues) {ierr = DMPlexPrintMatSetValues(PETSC_VIEWER_STDOUT_SELFPETSC_VIEWER_STDOUT_(((MPI_Comm)0x44000001)), A, point, numIndices, indices, 0, NULL((void*)0), values);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5914,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5915

ierr = MatSetValues(A, numIndices, indices, numIndices, indices, values, mode);

5916

if (mesh->printFEM > 1) {

5917

PetscInt i;

5918

ierr = PetscPrintf(PETSC_COMM_SELF((MPI_Comm)0x44000001), " Indices:");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5918,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5919

for (i = 0; i < numIndices; ++i) {ierr = PetscPrintf(PETSC_COMM_SELF((MPI_Comm)0x44000001), " %D", indices[i]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5919,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5920

ierr = PetscPrintf(PETSC_COMM_SELF((MPI_Comm)0x44000001), "\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5920,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5921

}

5922

if (ierr) {

5923

PetscMPIInt rank;

5924

PetscErrorCode ierr2;

5925

5926

ierr2 = MPI_Comm_rank(PetscObjectComm((PetscObject)A), &rank);CHKERRQ(ierr2)do {if (__builtin_expect(!!(ierr2),0)) return PetscError(((MPI_Comm
)0x44000001),5926,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr2,PETSC_ERROR_REPEAT," ");} while (0);

5927

ierr2 = (*PetscErrorPrintf)("[%d]ERROR in DMPlexMatSetClosure\n", rank);CHKERRQ(ierr2)do {if (__builtin_expect(!!(ierr2),0)) return PetscError(((MPI_Comm
)0x44000001),5927,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr2,PETSC_ERROR_REPEAT," ");} while (0);

5928

ierr2 = DMPlexPrintMatSetValues(PETSC_VIEWER_STDERR_SELFPETSC_VIEWER_STDERR_(((MPI_Comm)0x44000001)), A, point, numIndices, indices, 0, NULL((void*)0), values);CHKERRQ(ierr2)do {if (__builtin_expect(!!(ierr2),0)) return PetscError(((MPI_Comm
)0x44000001),5928,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr2,PETSC_ERROR_REPEAT," ");} while (0);

5929

ierr2 = DMRestoreWorkArray(dm, numIndices, MPIU_INT((MPI_Datatype)0x4c000405), &indices);CHKERRQ(ierr2)do {if (__builtin_expect(!!(ierr2),0)) return PetscError(((MPI_Comm
)0x44000001),5929,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr2,PETSC_ERROR_REPEAT," ");} while (0);

5930

CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5930,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5931

}

5932

for (f = 0; f < PetscMax(1,numFields)(((1)<(numFields)) ? (numFields) : (1)); f++) {

5933

if (numFields) {ierr = PetscSectionRestoreFieldPointSyms(section,f,numPoints,points,&perms[f],&flips[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5933,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5934

else {ierr = PetscSectionRestorePointSyms(section,numPoints,points,&perms[f],&flips[f]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5934,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5935

}

5936

if (newNumPoints) {

5937

ierr = DMRestoreWorkArray(dm,newNumIndices*newNumIndices,MPIU_SCALAR((MPI_Datatype)0x4c00080b),&newValues);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5937,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5938

ierr = DMRestoreWorkArray(dm,2*newNumPoints,MPIU_INT((MPI_Datatype)0x4c000405),&newPoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5938,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5939

}

5940

else {

5941

if (valCopy) {

5942

ierr = DMRestoreWorkArray(dm,numIndices*numIndices,MPIU_SCALAR((MPI_Datatype)0x4c00080b),&valCopy);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5942,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5943

}

5944

ierr = DMPlexRestoreCompressedClosure(dm,section,point,&numPoints,&points,&clSection,&clPoints,&clp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5944,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5945

}

5946

ierr = DMRestoreWorkArray(dm, numIndices, MPIU_INT((MPI_Datatype)0x4c000405), &indices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5946,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5947

5948

}

5949

5950

PetscErrorCode DMPlexMatSetClosureRefined(DM dmf, PetscSection fsection, PetscSection globalFSection, DM dmc, PetscSection csection, PetscSection globalCSection, Mat A, PetscInt point, const PetscScalar values[], InsertMode mode)

5951

{

5952

DM_Plex *mesh = (DM_Plex*) dmf->data;

5953

PetscInt *fpoints = NULL((void*)0), *ftotpoints = NULL((void*)0);

5954

PetscInt *cpoints = NULL((void*)0);

5955

PetscInt *findices, *cindices;

5956

const PetscInt *fclperm, *cclperm;

5957

PetscInt foffsets[32], coffsets[32];

5958

CellRefiner cellRefiner;

5959

PetscInt numFields, numSubcells, maxFPoints, numFPoints, numCPoints, numFIndices, numCIndices, dof, off, globalOff, pStart, pEnd, p, q, r, s, f;

5960

PetscErrorCode ierr;

5961

5962

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 5962; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

5963

PetscValidHeaderSpecific(dmf, DM_CLASSID, 1)do { if (!dmf) return PetscError(((MPI_Comm)0x44000001),5963,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",1); if (
!PetscCheckPointer(dmf,PETSC_OBJECT)) return PetscError(((MPI_Comm
)0x44000001),5963,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dmf))->classid != DM_CLASSID) { if
(((PetscObject)(dmf))->classid == -1) return PetscError((
(MPI_Comm)0x44000001),5963,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),5963,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

5964

PetscValidHeaderSpecific(dmc, DM_CLASSID, 4)do { if (!dmc) return PetscError(((MPI_Comm)0x44000001),5964,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",4); if (
!PetscCheckPointer(dmc,PETSC_OBJECT)) return PetscError(((MPI_Comm
)0x44000001),5964,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,4); if (((PetscObject)(dmc))->classid != DM_CLASSID) { if
(((PetscObject)(dmc))->classid == -1) return PetscError((
(MPI_Comm)0x44000001),5964,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,4); else return PetscError(((MPI_Comm)0x44000001),5964,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",4); } } while (0);

5965

if (!fsection) {ierr = DMGetSection(dmf, &fsection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5965,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5966

PetscValidHeaderSpecific(fsection, PETSC_SECTION_CLASSID, 2)do { if (!fsection) return PetscError(((MPI_Comm)0x44000001),
5966,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (
!PetscCheckPointer(fsection,PETSC_OBJECT)) return PetscError(
((MPI_Comm)0x44000001),5966,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(fsection))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(fsection))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),5966,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),5966,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",2); } } while (0);

5967

if (!csection) {ierr = DMGetSection(dmc, &csection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5967,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5968

PetscValidHeaderSpecific(csection, PETSC_SECTION_CLASSID, 5)do { if (!csection) return PetscError(((MPI_Comm)0x44000001),
5968,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",5); if (
!PetscCheckPointer(csection,PETSC_OBJECT)) return PetscError(
((MPI_Comm)0x44000001),5968,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,5); if (((PetscObject)(csection))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(csection))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),5968,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,5); else return PetscError(((MPI_Comm)0x44000001),5968,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",5); } } while (0);

5969

if (!globalFSection) {ierr = DMGetGlobalSection(dmf, &globalFSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5969,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5970

PetscValidHeaderSpecific(globalFSection, PETSC_SECTION_CLASSID, 3)do { if (!globalFSection) return PetscError(((MPI_Comm)0x44000001
),5970,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",3); if (
!PetscCheckPointer(globalFSection,PETSC_OBJECT)) return PetscError
(((MPI_Comm)0x44000001),5970,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,3); if (((PetscObject)(globalFSection))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(globalFSection))->classid == -1) return
PetscError(((MPI_Comm)0x44000001),5970,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,3); else return PetscError(((MPI_Comm)0x44000001),5970,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",3); } } while (0);

5971

if (!globalCSection) {ierr = DMGetGlobalSection(dmc, &globalCSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5971,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

5972

PetscValidHeaderSpecific(globalCSection, PETSC_SECTION_CLASSID, 6)do { if (!globalCSection) return PetscError(((MPI_Comm)0x44000001
),5972,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",6); if (
!PetscCheckPointer(globalCSection,PETSC_OBJECT)) return PetscError
(((MPI_Comm)0x44000001),5972,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,6); if (((PetscObject)(globalCSection))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(globalCSection))->classid == -1) return
PetscError(((MPI_Comm)0x44000001),5972,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,6); else return PetscError(((MPI_Comm)0x44000001),5972,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",6); } } while (0);

5973

PetscValidHeaderSpecific(A, MAT_CLASSID, 7)do { if (!A) return PetscError(((MPI_Comm)0x44000001),5973,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",7); if (!PetscCheckPointer(A,PETSC_OBJECT
)) return PetscError(((MPI_Comm)0x44000001),5973,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,7); if (((PetscObject)(A))->classid != MAT_CLASSID) { if (
((PetscObject)(A))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),5973,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,7); else return PetscError(((MPI_Comm)0x44000001),5973,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",7); } } while (0);

5974

ierr = PetscSectionGetNumFields(fsection, &numFields);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5974,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5975

if (numFields > 31) SETERRQ1(PetscObjectComm((PetscObject)dmf), PETSC_ERR_ARG_OUTOFRANGE, "Number of fields %D limited to 31", numFields)return PetscError(PetscObjectComm((PetscObject)dmf),5975,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Number of fields %D limited to 31",numFields);

5976

ierr = PetscArrayzero(foffsets, 32)PetscMemzero(foffsets,(32)*sizeof(*(foffsets)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5976,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5977

ierr = PetscArrayzero(coffsets, 32)PetscMemzero(coffsets,(32)*sizeof(*(coffsets)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5977,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5978

ierr = PetscSectionGetClosureInversePermutation_Internal(fsection, (PetscObject) dmf, NULL((void*)0), &fclperm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5978,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5979

ierr = PetscSectionGetClosureInversePermutation_Internal(csection, (PetscObject) dmc, NULL((void*)0), &cclperm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5979,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5980

/* Column indices */

5981

ierr = DMPlexGetTransitiveClosure(dmc, point, PETSC_TRUE, &numCPoints, &cpoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5981,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5982

maxFPoints = numCPoints;

5983

/* Compress out points not in the section */

5984

/* TODO: Squeeze out points with 0 dof as well */

5985

ierr = PetscSectionGetChart(csection, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5985,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5986

for (p = 0, q = 0; p < numCPoints*2; p += 2) {

5987

if ((cpoints[p] >= pStart) && (cpoints[p] < pEnd)) {

5988

cpoints[q*2] = cpoints[p];

5989

cpoints[q*2+1] = cpoints[p+1];

5990

++q;

5991

}

5992

}

5993

numCPoints = q;

5994

for (p = 0, numCIndices = 0; p < numCPoints*2; p += 2) {

5995

PetscInt fdof;

5996

5997

ierr = PetscSectionGetDof(csection, cpoints[p], &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),5997,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

5998

if (!dof) continue;

5999

for (f = 0; f < numFields; ++f) {

6000

ierr = PetscSectionGetFieldDof(csection, cpoints[p], f, &fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6000,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6001

coffsets[f+1] += fdof;

6002

}

6003

numCIndices += dof;

6004

}

6005

for (f = 1; f < numFields; ++f) coffsets[f+1] += coffsets[f];

6006

/* Row indices */

6007

ierr = DMPlexGetCellRefiner_Internal(dmc, &cellRefiner);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6007,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6008

ierr = CellRefinerGetAffineTransforms_Internal(cellRefiner, &numSubcells, NULL((void*)0), NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6008,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6009

ierr = DMGetWorkArray(dmf, maxFPoints*2*numSubcells, MPIU_INT((MPI_Datatype)0x4c000405), &ftotpoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6009,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6010

for (r = 0, q = 0; r < numSubcells; ++r) {

6011

/* TODO Map from coarse to fine cells */

6012

ierr = DMPlexGetTransitiveClosure(dmf, point*numSubcells + r, PETSC_TRUE, &numFPoints, &fpoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6012,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6013

/* Compress out points not in the section */

6014

ierr = PetscSectionGetChart(fsection, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6014,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6015

for (p = 0; p < numFPoints*2; p += 2) {

6016

if ((fpoints[p] >= pStart) && (fpoints[p] < pEnd)) {

6017

ierr = PetscSectionGetDof(fsection, fpoints[p], &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6017,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6018

if (!dof) continue;

6019

for (s = 0; s < q; ++s) if (fpoints[p] == ftotpoints[s*2]) break;

6020

if (s < q) continue;

6021

ftotpoints[q*2] = fpoints[p];

6022

ftotpoints[q*2+1] = fpoints[p+1];

6023

++q;

6024

}

6025

}

6026

ierr = DMPlexRestoreTransitiveClosure(dmf, point, PETSC_TRUE, &numFPoints, &fpoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6026,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6027

}

6028

numFPoints = q;

6029

for (p = 0, numFIndices = 0; p < numFPoints*2; p += 2) {

6030

PetscInt fdof;

6031

6032

ierr = PetscSectionGetDof(fsection, ftotpoints[p], &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6032,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6033

if (!dof) continue;

6034

for (f = 0; f < numFields; ++f) {

6035

ierr = PetscSectionGetFieldDof(fsection, ftotpoints[p], f, &fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6035,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6036

foffsets[f+1] += fdof;

6037

}

6038

numFIndices += dof;

6039

}

6040

for (f = 1; f < numFields; ++f) foffsets[f+1] += foffsets[f];

6041

6042

if (numFields && foffsets[numFields] != numFIndices) SETERRQ2(PetscObjectComm((PetscObject)dmf), PETSC_ERR_PLIB, "Invalid size for closure %D should be %D", foffsets[numFields], numFIndices)return PetscError(PetscObjectComm((PetscObject)dmf),6042,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",77,PETSC_ERROR_INITIAL
,"Invalid size for closure %D should be %D",foffsets[numFields
],numFIndices);

6043

if (numFields && coffsets[numFields] != numCIndices) SETERRQ2(PetscObjectComm((PetscObject)dmc), PETSC_ERR_PLIB, "Invalid size for closure %D should be %D", coffsets[numFields], numCIndices)return PetscError(PetscObjectComm((PetscObject)dmc),6043,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",77,PETSC_ERROR_INITIAL
,"Invalid size for closure %D should be %D",coffsets[numFields
],numCIndices);

6044

ierr = DMGetWorkArray(dmf, numFIndices, MPIU_INT((MPI_Datatype)0x4c000405), &findices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6044,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6045

ierr = DMGetWorkArray(dmc, numCIndices, MPIU_INT((MPI_Datatype)0x4c000405), &cindices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6045,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6046

if (numFields) {

6047

const PetscInt **permsF[32] = {NULL((void*)0)};

6048

const PetscInt **permsC[32] = {NULL((void*)0)};

6049

6050

for (f = 0; f < numFields; f++) {

6051

ierr = PetscSectionGetFieldPointSyms(fsection,f,numFPoints,ftotpoints,&permsF[f],NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6051,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6052

ierr = PetscSectionGetFieldPointSyms(csection,f,numCPoints,cpoints,&permsC[f],NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6052,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6053

}

6054

for (p = 0; p < numFPoints; p++) {

6055

ierr = PetscSectionGetOffset(globalFSection, ftotpoints[2*p], &globalOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6055,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6056

ierr = DMPlexGetIndicesPointFields_Internal(fsection, ftotpoints[2*p], globalOff < 0 ? -(globalOff+1) : globalOff, foffsets, PETSC_FALSE, permsF, p, fclperm, findices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6056,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6057

}

6058

for (p = 0; p < numCPoints; p++) {

6059

ierr = PetscSectionGetOffset(globalCSection, cpoints[2*p], &globalOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6059,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6060

ierr = DMPlexGetIndicesPointFields_Internal(csection, cpoints[2*p], globalOff < 0 ? -(globalOff+1) : globalOff, coffsets, PETSC_FALSE, permsC, p, cclperm, cindices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6060,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6061

}

6062

for (f = 0; f < numFields; f++) {

6063

ierr = PetscSectionRestoreFieldPointSyms(fsection,f,numFPoints,ftotpoints,&permsF[f],NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6063,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6064

ierr = PetscSectionRestoreFieldPointSyms(csection,f,numCPoints,cpoints,&permsC[f],NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6064,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6065

}

6066

} else {

6067

const PetscInt **permsF = NULL((void*)0);

6068

const PetscInt **permsC = NULL((void*)0);

6069

6070

ierr = PetscSectionGetPointSyms(fsection,numFPoints,ftotpoints,&permsF,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6070,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6071

ierr = PetscSectionGetPointSyms(csection,numCPoints,cpoints,&permsC,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6071,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6072

for (p = 0, off = 0; p < numFPoints; p++) {

6073

const PetscInt *perm = permsF ? permsF[p] : NULL((void*)0);

6074

6075

ierr = PetscSectionGetOffset(globalFSection, ftotpoints[2*p], &globalOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6075,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6076

ierr = DMPlexGetIndicesPoint_Internal(fsection, ftotpoints[2*p], globalOff < 0 ? -(globalOff+1) : globalOff, &off, PETSC_FALSE, perm, fclperm, findices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6076,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6077

}

6078

for (p = 0, off = 0; p < numCPoints; p++) {

6079

const PetscInt *perm = permsC ? permsC[p] : NULL((void*)0);

6080

6081

ierr = PetscSectionGetOffset(globalCSection, cpoints[2*p], &globalOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6081,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6082

ierr = DMPlexGetIndicesPoint_Internal(csection, cpoints[2*p], globalOff < 0 ? -(globalOff+1) : globalOff, &off, PETSC_FALSE, perm, cclperm, cindices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6082,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6083

}

6084

ierr = PetscSectionRestorePointSyms(fsection,numFPoints,ftotpoints,&permsF,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6084,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6085

ierr = PetscSectionRestorePointSyms(csection,numCPoints,cpoints,&permsC,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6085,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6086

}

6087

if (mesh->printSetValues) {ierr = DMPlexPrintMatSetValues(PETSC_VIEWER_STDOUT_SELFPETSC_VIEWER_STDOUT_(((MPI_Comm)0x44000001)), A, point, numFIndices, findices, numCIndices, cindices, values);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6087,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

6088

/* TODO: flips */

6089

ierr = MatSetValues(A, numFIndices, findices, numCIndices, cindices, values, mode);

6090

if (ierr) {

6091

PetscMPIInt rank;

6092

PetscErrorCode ierr2;

6093

6094

ierr2 = MPI_Comm_rank(PetscObjectComm((PetscObject)A), &rank);CHKERRQ(ierr2)do {if (__builtin_expect(!!(ierr2),0)) return PetscError(((MPI_Comm
)0x44000001),6094,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr2,PETSC_ERROR_REPEAT," ");} while (0);

6095

ierr2 = (*PetscErrorPrintf)("[%d]ERROR in DMPlexMatSetClosure\n", rank);CHKERRQ(ierr2)do {if (__builtin_expect(!!(ierr2),0)) return PetscError(((MPI_Comm
)0x44000001),6095,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr2,PETSC_ERROR_REPEAT," ");} while (0);

6096

ierr2 = DMPlexPrintMatSetValues(PETSC_VIEWER_STDERR_SELFPETSC_VIEWER_STDERR_(((MPI_Comm)0x44000001)), A, point, numFIndices, findices, numCIndices, cindices, values);CHKERRQ(ierr2)do {if (__builtin_expect(!!(ierr2),0)) return PetscError(((MPI_Comm
)0x44000001),6096,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr2,PETSC_ERROR_REPEAT," ");} while (0);

6097

ierr2 = DMRestoreWorkArray(dmf, numFIndices, MPIU_INT((MPI_Datatype)0x4c000405), &findices);CHKERRQ(ierr2)do {if (__builtin_expect(!!(ierr2),0)) return PetscError(((MPI_Comm
)0x44000001),6097,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr2,PETSC_ERROR_REPEAT," ");} while (0);

6098

ierr2 = DMRestoreWorkArray(dmc, numCIndices, MPIU_INT((MPI_Datatype)0x4c000405), &cindices);CHKERRQ(ierr2)do {if (__builtin_expect(!!(ierr2),0)) return PetscError(((MPI_Comm
)0x44000001),6098,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr2,PETSC_ERROR_REPEAT," ");} while (0);

6099

CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6099,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6100

}

6101

ierr = DMRestoreWorkArray(dmf, numCPoints*2*4, MPIU_INT((MPI_Datatype)0x4c000405), &ftotpoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6101,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6102

ierr = DMPlexRestoreTransitiveClosure(dmc, point, PETSC_TRUE, &numCPoints, &cpoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6102,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6103

ierr = DMRestoreWorkArray(dmf, numFIndices, MPIU_INT((MPI_Datatype)0x4c000405), &findices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6103,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6104

ierr = DMRestoreWorkArray(dmc, numCIndices, MPIU_INT((MPI_Datatype)0x4c000405), &cindices);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6104,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6105

6106

}

6107

6108

PetscErrorCode DMPlexMatGetClosureIndicesRefined(DM dmf, PetscSection fsection, PetscSection globalFSection, DM dmc, PetscSection csection, PetscSection globalCSection, PetscInt point, PetscInt cindices[], PetscInt findices[])

6109

{

6110

PetscInt *fpoints = NULL((void*)0), *ftotpoints = NULL((void*)0);

6111

PetscInt *cpoints = NULL((void*)0);

6112

PetscInt foffsets[32], coffsets[32];

6113

const PetscInt *fclperm, *cclperm;

6114

CellRefiner cellRefiner;

6115

PetscInt numFields, numSubcells, maxFPoints, numFPoints, numCPoints, numFIndices, numCIndices, dof, off, globalOff, pStart, pEnd, p, q, r, s, f;

6116

PetscErrorCode ierr;

6117

6118

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6118; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6119

PetscValidHeaderSpecific(dmf, DM_CLASSID, 1)do { if (!dmf) return PetscError(((MPI_Comm)0x44000001),6119,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",1); if (
!PetscCheckPointer(dmf,PETSC_OBJECT)) return PetscError(((MPI_Comm
)0x44000001),6119,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dmf))->classid != DM_CLASSID) { if
(((PetscObject)(dmf))->classid == -1) return PetscError((
(MPI_Comm)0x44000001),6119,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),6119,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

6120

PetscValidHeaderSpecific(dmc, DM_CLASSID, 4)do { if (!dmc) return PetscError(((MPI_Comm)0x44000001),6120,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",4); if (
!PetscCheckPointer(dmc,PETSC_OBJECT)) return PetscError(((MPI_Comm
)0x44000001),6120,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,4); if (((PetscObject)(dmc))->classid != DM_CLASSID) { if
(((PetscObject)(dmc))->classid == -1) return PetscError((
(MPI_Comm)0x44000001),6120,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,4); else return PetscError(((MPI_Comm)0x44000001),6120,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",4); } } while (0);

6121

if (!fsection) {ierr = DMGetSection(dmf, &fsection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6121,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

6122

PetscValidHeaderSpecific(fsection, PETSC_SECTION_CLASSID, 2)do { if (!fsection) return PetscError(((MPI_Comm)0x44000001),
6122,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (
!PetscCheckPointer(fsection,PETSC_OBJECT)) return PetscError(
((MPI_Comm)0x44000001),6122,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(fsection))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(fsection))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),6122,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),6122,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",2); } } while (0);

6123

if (!csection) {ierr = DMGetSection(dmc, &csection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6123,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

6124

PetscValidHeaderSpecific(csection, PETSC_SECTION_CLASSID, 5)do { if (!csection) return PetscError(((MPI_Comm)0x44000001),
6124,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",5); if (
!PetscCheckPointer(csection,PETSC_OBJECT)) return PetscError(
((MPI_Comm)0x44000001),6124,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,5); if (((PetscObject)(csection))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(csection))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),6124,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,5); else return PetscError(((MPI_Comm)0x44000001),6124,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",5); } } while (0);

6125

if (!globalFSection) {ierr = DMGetGlobalSection(dmf, &globalFSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6125,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

6126

PetscValidHeaderSpecific(globalFSection, PETSC_SECTION_CLASSID, 3)do { if (!globalFSection) return PetscError(((MPI_Comm)0x44000001
),6126,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",3); if (
!PetscCheckPointer(globalFSection,PETSC_OBJECT)) return PetscError
(((MPI_Comm)0x44000001),6126,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,3); if (((PetscObject)(globalFSection))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(globalFSection))->classid == -1) return
PetscError(((MPI_Comm)0x44000001),6126,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,3); else return PetscError(((MPI_Comm)0x44000001),6126,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",3); } } while (0);

6127

if (!globalCSection) {ierr = DMGetGlobalSection(dmc, &globalCSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6127,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

6128

PetscValidHeaderSpecific(globalCSection, PETSC_SECTION_CLASSID, 6)do { if (!globalCSection) return PetscError(((MPI_Comm)0x44000001
),6128,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",6); if (
!PetscCheckPointer(globalCSection,PETSC_OBJECT)) return PetscError
(((MPI_Comm)0x44000001),6128,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,6); if (((PetscObject)(globalCSection))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(globalCSection))->classid == -1) return
PetscError(((MPI_Comm)0x44000001),6128,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,6); else return PetscError(((MPI_Comm)0x44000001),6128,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",6); } } while (0);

6129

ierr = PetscSectionGetNumFields(fsection, &numFields);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6129,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6130

if (numFields > 31) SETERRQ1(PetscObjectComm((PetscObject)dmf), PETSC_ERR_ARG_OUTOFRANGE, "Number of fields %D limited to 31", numFields)return PetscError(PetscObjectComm((PetscObject)dmf),6130,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Number of fields %D limited to 31",numFields);

6131

ierr = PetscArrayzero(foffsets, 32)PetscMemzero(foffsets,(32)*sizeof(*(foffsets)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6131,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6132

ierr = PetscArrayzero(coffsets, 32)PetscMemzero(coffsets,(32)*sizeof(*(coffsets)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6132,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6133

ierr = PetscSectionGetClosureInversePermutation_Internal(fsection, (PetscObject) dmf, NULL((void*)0), &fclperm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6133,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6134

ierr = PetscSectionGetClosureInversePermutation_Internal(csection, (PetscObject) dmc, NULL((void*)0), &cclperm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6134,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6135

/* Column indices */

6136

ierr = DMPlexGetTransitiveClosure(dmc, point, PETSC_TRUE, &numCPoints, &cpoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6136,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6137

maxFPoints = numCPoints;

6138

/* Compress out points not in the section */

6139

/* TODO: Squeeze out points with 0 dof as well */

6140

ierr = PetscSectionGetChart(csection, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6140,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6141

for (p = 0, q = 0; p < numCPoints*2; p += 2) {

6142

if ((cpoints[p] >= pStart) && (cpoints[p] < pEnd)) {

6143

cpoints[q*2] = cpoints[p];

6144

cpoints[q*2+1] = cpoints[p+1];

6145

++q;

6146

}

6147

}

6148

numCPoints = q;

6149

for (p = 0, numCIndices = 0; p < numCPoints*2; p += 2) {

6150

PetscInt fdof;

6151

6152

ierr = PetscSectionGetDof(csection, cpoints[p], &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6152,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6153

if (!dof) continue;

6154

for (f = 0; f < numFields; ++f) {

6155

ierr = PetscSectionGetFieldDof(csection, cpoints[p], f, &fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6155,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6156

coffsets[f+1] += fdof;

6157

}

6158

numCIndices += dof;

6159

}

6160

for (f = 1; f < numFields; ++f) coffsets[f+1] += coffsets[f];

6161

/* Row indices */

6162

ierr = DMPlexGetCellRefiner_Internal(dmc, &cellRefiner);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6162,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6163

ierr = CellRefinerGetAffineTransforms_Internal(cellRefiner, &numSubcells, NULL((void*)0), NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6163,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6164

ierr = DMGetWorkArray(dmf, maxFPoints*2*numSubcells, MPIU_INT((MPI_Datatype)0x4c000405), &ftotpoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6164,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6165

for (r = 0, q = 0; r < numSubcells; ++r) {

6166

/* TODO Map from coarse to fine cells */

6167

ierr = DMPlexGetTransitiveClosure(dmf, point*numSubcells + r, PETSC_TRUE, &numFPoints, &fpoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6167,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6168

/* Compress out points not in the section */

6169

ierr = PetscSectionGetChart(fsection, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6169,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6170

for (p = 0; p < numFPoints*2; p += 2) {

6171

if ((fpoints[p] >= pStart) && (fpoints[p] < pEnd)) {

6172

ierr = PetscSectionGetDof(fsection, fpoints[p], &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6172,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6173

if (!dof) continue;

6174

for (s = 0; s < q; ++s) if (fpoints[p] == ftotpoints[s*2]) break;

6175

if (s < q) continue;

6176

ftotpoints[q*2] = fpoints[p];

6177

ftotpoints[q*2+1] = fpoints[p+1];

6178

++q;

6179

}

6180

}

6181

ierr = DMPlexRestoreTransitiveClosure(dmf, point, PETSC_TRUE, &numFPoints, &fpoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6181,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6182

}

6183

numFPoints = q;

6184

for (p = 0, numFIndices = 0; p < numFPoints*2; p += 2) {

6185

PetscInt fdof;

6186

6187

ierr = PetscSectionGetDof(fsection, ftotpoints[p], &dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6187,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6188

if (!dof) continue;

6189

for (f = 0; f < numFields; ++f) {

6190

ierr = PetscSectionGetFieldDof(fsection, ftotpoints[p], f, &fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6190,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6191

foffsets[f+1] += fdof;

6192

}

6193

numFIndices += dof;

6194

}

6195

for (f = 1; f < numFields; ++f) foffsets[f+1] += foffsets[f];

6196

6197

if (numFields && foffsets[numFields] != numFIndices) SETERRQ2(PetscObjectComm((PetscObject)dmf), PETSC_ERR_PLIB, "Invalid size for closure %D should be %D", foffsets[numFields], numFIndices)return PetscError(PetscObjectComm((PetscObject)dmf),6197,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",77,PETSC_ERROR_INITIAL
,"Invalid size for closure %D should be %D",foffsets[numFields
],numFIndices);

6198

if (numFields && coffsets[numFields] != numCIndices) SETERRQ2(PetscObjectComm((PetscObject)dmc), PETSC_ERR_PLIB, "Invalid size for closure %D should be %D", coffsets[numFields], numCIndices)return PetscError(PetscObjectComm((PetscObject)dmc),6198,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",77,PETSC_ERROR_INITIAL
,"Invalid size for closure %D should be %D",coffsets[numFields
],numCIndices);

6199

if (numFields) {

6200

const PetscInt **permsF[32] = {NULL((void*)0)};

6201

const PetscInt **permsC[32] = {NULL((void*)0)};

6202

6203

for (f = 0; f < numFields; f++) {

6204

ierr = PetscSectionGetFieldPointSyms(fsection,f,numFPoints,ftotpoints,&permsF[f],NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6204,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6205

ierr = PetscSectionGetFieldPointSyms(csection,f,numCPoints,cpoints,&permsC[f],NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6205,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6206

}

6207

for (p = 0; p < numFPoints; p++) {

6208

ierr = PetscSectionGetOffset(globalFSection, ftotpoints[2*p], &globalOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6208,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6209

DMPlexGetIndicesPointFields_Internal(fsection, ftotpoints[2*p], globalOff < 0 ? -(globalOff+1) : globalOff, foffsets, PETSC_FALSE, permsF, p, fclperm, findices);

6210

}

6211

for (p = 0; p < numCPoints; p++) {

6212

ierr = PetscSectionGetOffset(globalCSection, cpoints[2*p], &globalOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6212,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6213

DMPlexGetIndicesPointFields_Internal(csection, cpoints[2*p], globalOff < 0 ? -(globalOff+1) : globalOff, coffsets, PETSC_FALSE, permsC, p, cclperm, cindices);

6214

}

6215

for (f = 0; f < numFields; f++) {

6216

ierr = PetscSectionRestoreFieldPointSyms(fsection,f,numFPoints,ftotpoints,&permsF[f],NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6216,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6217

ierr = PetscSectionRestoreFieldPointSyms(csection,f,numCPoints,cpoints,&permsC[f],NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6217,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6218

}

6219

} else {

6220

const PetscInt **permsF = NULL((void*)0);

6221

const PetscInt **permsC = NULL((void*)0);

6222

6223

ierr = PetscSectionGetPointSyms(fsection,numFPoints,ftotpoints,&permsF,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6223,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6224

ierr = PetscSectionGetPointSyms(csection,numCPoints,cpoints,&permsC,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6224,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6225

for (p = 0, off = 0; p < numFPoints; p++) {

6226

const PetscInt *perm = permsF ? permsF[p] : NULL((void*)0);

6227

6228

ierr = PetscSectionGetOffset(globalFSection, ftotpoints[2*p], &globalOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6228,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6229

DMPlexGetIndicesPoint_Internal(fsection, ftotpoints[2*p], globalOff < 0 ? -(globalOff+1) : globalOff, &off, PETSC_FALSE, perm, fclperm, findices);

6230

}

6231

for (p = 0, off = 0; p < numCPoints; p++) {

6232

const PetscInt *perm = permsC ? permsC[p] : NULL((void*)0);

6233

6234

ierr = PetscSectionGetOffset(globalCSection, cpoints[2*p], &globalOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6234,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6235

DMPlexGetIndicesPoint_Internal(csection, cpoints[2*p], globalOff < 0 ? -(globalOff+1) : globalOff, &off, PETSC_FALSE, perm, cclperm, cindices);

6236

}

6237

ierr = PetscSectionRestorePointSyms(fsection,numFPoints,ftotpoints,&permsF,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6237,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6238

ierr = PetscSectionRestorePointSyms(csection,numCPoints,cpoints,&permsC,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6238,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6239

}

6240

ierr = DMRestoreWorkArray(dmf, numCPoints*2*4, MPIU_INT((MPI_Datatype)0x4c000405), &ftotpoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6240,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6241

ierr = DMPlexRestoreTransitiveClosure(dmc, point, PETSC_TRUE, &numCPoints, &cpoints);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6241,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6242

6243

}

6244

6245

/*@

6246

DMPlexGetHybridBounds - Get the first mesh point of each dimension which is a hybrid

6247

6248

Input Parameter:

6249

. dm - The DMPlex object

6250

6251

Output Parameters:

6252

+ cMax - The first hybrid cell

6253

. fMax - The first hybrid face

6254

. eMax - The first hybrid edge

6255

- vMax - The first hybrid vertex

6256

6257

Level: developer

6258

6259

.seealso DMPlexCreateHybridMesh(), DMPlexSetHybridBounds()

6260

@*/

6261

PetscErrorCode DMPlexGetHybridBounds(DM dm, PetscInt *cMax, PetscInt *fMax, PetscInt *eMax, PetscInt *vMax)

6262

{

6263

DM_Plex *mesh = (DM_Plex*) dm->data;

6264

PetscInt dim;

6265

PetscErrorCode ierr;

6266

6267

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6267; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6268

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),6268,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),6268,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),6268,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),6268,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

6269

ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6269,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6270

if (dim < 0) SETERRQ(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONGSTATE, "DM dimension not yet set")return PetscError(PetscObjectComm((PetscObject)dm),6270,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",73,PETSC_ERROR_INITIAL
,"DM dimension not yet set");

6271

if (cMax) *cMax = mesh->hybridPointMax[dim];

6272

if (fMax) *fMax = mesh->hybridPointMax[PetscMax(dim-1,0)(((dim-1)<(0)) ? (0) : (dim-1))];

6273

if (eMax) *eMax = mesh->hybridPointMax[1];

6274

if (vMax) *vMax = mesh->hybridPointMax[0];

6275

6276

}

6277

6278

static PetscErrorCode DMPlexCreateDimStratum(DM dm, DMLabel depthLabel, DMLabel dimLabel, PetscInt d, PetscInt dMax)

6279

{

6280

IS is, his;

6281

PetscInt first = 0, stride;

6282

PetscBool isStride;

6283

PetscErrorCode ierr;

6284

6285

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6285; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6286

ierr = DMLabelGetStratumIS(depthLabel, d, &is);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6286,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6287

ierr = PetscObjectTypeCompare((PetscObject) is, ISSTRIDE"stride", &isStride);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6287,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6288

if (isStride) {

6289

ierr = ISStrideGetInfo(is, &first, &stride);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6289,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6290

}

6291

if (is && (!isStride || stride != 1)) SETERRQ1(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "DM is not stratified: depth %D IS is not contiguous", d)return PetscError(((MPI_Comm)0x44000001),6291,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,73,PETSC_ERROR_INITIAL,"DM is not stratified: depth %D IS is not contiguous"
,d);

6292

ierr = ISCreateStride(PETSC_COMM_SELF((MPI_Comm)0x44000001), (dMax - first), first, 1, &his);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6292,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6293

ierr = DMLabelSetStratumIS(dimLabel, d, his);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6293,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6294

ierr = ISDestroy(&his);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6294,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6295

ierr = ISDestroy(&is);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6295,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6296

6297

}

6298

6299

/*@

6300

DMPlexSetHybridBounds - Set the first mesh point of each dimension which is a hybrid

6301

6302

Input Parameters:

6303

. dm - The DMPlex object

6304

. cMax - The first hybrid cell

6305

. fMax - The first hybrid face

6306

. eMax - The first hybrid edge

6307

- vMax - The first hybrid vertex

6308

6309

Level: developer

6310

6311

.seealso DMPlexCreateHybridMesh(), DMPlexGetHybridBounds()

6312

@*/

6313

PetscErrorCode DMPlexSetHybridBounds(DM dm, PetscInt cMax, PetscInt fMax, PetscInt eMax, PetscInt vMax)

6314

{

6315

DM_Plex *mesh = (DM_Plex*) dm->data;

6316

PetscInt dim;

6317

PetscErrorCode ierr;

6318

6319

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6319; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6320

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),6320,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),6320,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),6320,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),6320,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

6321

ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6321,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6322

if (dim < 0) SETERRQ(PetscObjectComm((PetscObject)dm), PETSC_ERR_ARG_WRONGSTATE, "DM dimension not yet set")return PetscError(PetscObjectComm((PetscObject)dm),6322,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",73,PETSC_ERROR_INITIAL
,"DM dimension not yet set");

6323

if (cMax >= 0) mesh->hybridPointMax[dim] = cMax;

6324

if (fMax >= 0) mesh->hybridPointMax[PetscMax(dim-1,0)(((dim-1)<(0)) ? (0) : (dim-1))] = fMax;

6325

if (eMax >= 0) mesh->hybridPointMax[1] = eMax;

6326

if (vMax >= 0) mesh->hybridPointMax[0] = vMax;

6327

6328

}

6329

6330

/*@C

6331

DMPlexGetVTKCellHeight - Returns the height in the DAG used to determine which points are cells (normally 0)

6332

6333

Input Parameter:

6334

. dm - The DMPlex object

6335

6336

Output Parameter:

6337

. cellHeight - The height of a cell

6338

6339

Level: developer

6340

6341

.seealso DMPlexSetVTKCellHeight()

6342

@*/

6343

PetscErrorCode DMPlexGetVTKCellHeight(DM dm, PetscInt *cellHeight)

6344

{

6345

DM_Plex *mesh = (DM_Plex*) dm->data;

6346

6347

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6347; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6348

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),6348,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),6348,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),6348,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),6348,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

6349

PetscValidPointer(cellHeight, 2)do { if (!cellHeight) return PetscError(((MPI_Comm)0x44000001
),6349,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",2); if
(!PetscCheckPointer(cellHeight,PETSC_CHAR)) return PetscError
(((MPI_Comm)0x44000001),6349,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",2);
} while (0);

6350

*cellHeight = mesh->vtkCellHeight;

6351

6352

}

6353

6354

/*@C

6355

DMPlexSetVTKCellHeight - Sets the height in the DAG used to determine which points are cells (normally 0)

6356

6357

Input Parameters:

6358

+ dm - The DMPlex object

6359

- cellHeight - The height of a cell

6360

6361

Level: developer

6362

6363

.seealso DMPlexGetVTKCellHeight()

6364

@*/

6365

PetscErrorCode DMPlexSetVTKCellHeight(DM dm, PetscInt cellHeight)

6366

{

6367

DM_Plex *mesh = (DM_Plex*) dm->data;

6368

6369

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6369; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6370

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),6370,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),6370,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),6370,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),6370,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

6371

mesh->vtkCellHeight = cellHeight;

6372

6373

}

6374

6375

/* We can easily have a form that takes an IS instead */

6376

PetscErrorCode DMPlexCreateNumbering_Internal(DM dm, PetscInt pStart, PetscInt pEnd, PetscInt shift, PetscInt *globalSize, PetscSF sf, IS *numbering)

6377

{

6378

PetscSection section, globalSection;

6379

PetscInt *numbers, p;

6380

PetscErrorCode ierr;

6381

6382

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6382; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6383

ierr = PetscSectionCreate(PetscObjectComm((PetscObject)dm), &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6383,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6384

ierr = PetscSectionSetChart(section, pStart, pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6384,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6385

for (p = pStart; p < pEnd; ++p) {

6386

ierr = PetscSectionSetDof(section, p, 1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6386,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6387

}

6388

ierr = PetscSectionSetUp(section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6388,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6389

ierr = PetscSectionCreateGlobalSection(section, sf, PETSC_FALSE, PETSC_FALSE, &globalSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6389,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6390

ierr = PetscMalloc1(pEnd - pStart, &numbers)PetscMallocA(1,PETSC_FALSE,6390,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(pEnd - pStart)*sizeof(**(&numbers)),(&numbers
));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6390,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6391

for (p = pStart; p < pEnd; ++p) {

6392

ierr = PetscSectionGetOffset(globalSection, p, &numbers[p-pStart]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6392,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6393

if (numbers[p-pStart] < 0) numbers[p-pStart] -= shift;

6394

else numbers[p-pStart] += shift;

6395

}

6396

ierr = ISCreateGeneral(PetscObjectComm((PetscObject) dm), pEnd - pStart, numbers, PETSC_OWN_POINTER, numbering);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6396,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6397

if (globalSize) {

6398

PetscLayout layout;

6399

ierr = PetscSectionGetPointLayout(PetscObjectComm((PetscObject) dm), globalSection, &layout);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6399,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6400

ierr = PetscLayoutGetSize(layout, globalSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6400,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6401

ierr = PetscLayoutDestroy(&layout);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6401,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6402

}

6403

ierr = PetscSectionDestroy(&section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6403,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6404

ierr = PetscSectionDestroy(&globalSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6404,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6405

6406

}

6407

6408

PetscErrorCode DMPlexCreateCellNumbering_Internal(DM dm, PetscBool includeHybrid, IS *globalCellNumbers)

6409

{

6410

PetscInt cellHeight, cStart, cEnd, cMax;

6411

PetscErrorCode ierr;

6412

6413

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6413; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6414

ierr = DMPlexGetVTKCellHeight(dm, &cellHeight);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6414,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6415

ierr = DMPlexGetHeightStratum(dm, cellHeight, &cStart, &cEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6415,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6416

ierr = DMPlexGetHybridBounds(dm, &cMax, NULL((void*)0), NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6416,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6417

if (cMax >= 0 && !includeHybrid) cEnd = PetscMin(cEnd, cMax)(((cEnd)<(cMax)) ? (cEnd) : (cMax));

6418

ierr = DMPlexCreateNumbering_Internal(dm, cStart, cEnd, 0, NULL((void*)0), dm->sf, globalCellNumbers);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6418,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6419

6420

}

6421

6422

/*@

6423

DMPlexGetCellNumbering - Get a global cell numbering for all cells on this process

6424

6425

Input Parameter:

6426

. dm - The DMPlex object

6427

6428

Output Parameter:

6429

. globalCellNumbers - Global cell numbers for all cells on this process

6430

6431

Level: developer

6432

6433

.seealso DMPlexGetVertexNumbering()

6434

@*/

6435

PetscErrorCode DMPlexGetCellNumbering(DM dm, IS *globalCellNumbers)

6436

{

6437

DM_Plex *mesh = (DM_Plex*) dm->data;

6438

PetscErrorCode ierr;

6439

6440

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6440; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6441

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),6441,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),6441,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),6441,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),6441,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

6442

if (!mesh->globalCellNumbers) {ierr = DMPlexCreateCellNumbering_Internal(dm, PETSC_FALSE, &mesh->globalCellNumbers);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6442,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

6443

*globalCellNumbers = mesh->globalCellNumbers;

6444

6445

}

6446

6447

PetscErrorCode DMPlexCreateVertexNumbering_Internal(DM dm, PetscBool includeHybrid, IS *globalVertexNumbers)

6448

{

6449

PetscInt vStart, vEnd, vMax;

6450

PetscErrorCode ierr;

6451

6452

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6452; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6453

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),6453,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),6453,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),6453,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),6453,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

6454

ierr = DMPlexGetDepthStratum(dm, 0, &vStart, &vEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6454,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6455

ierr = DMPlexGetHybridBounds(dm, NULL((void*)0), NULL((void*)0), NULL((void*)0), &vMax);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6455,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6456

if (vMax >= 0 && !includeHybrid) vEnd = PetscMin(vEnd, vMax)(((vEnd)<(vMax)) ? (vEnd) : (vMax));

6457

ierr = DMPlexCreateNumbering_Internal(dm, vStart, vEnd, 0, NULL((void*)0), dm->sf, globalVertexNumbers);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6457,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6458

6459

}

6460

6461

/*@

6462

DMPlexGetVertexNumbering - Get a global certex numbering for all vertices on this process

6463

6464

Input Parameter:

6465

. dm - The DMPlex object

6466

6467

Output Parameter:

6468

. globalVertexNumbers - Global vertex numbers for all vertices on this process

6469

6470

Level: developer

6471

6472

.seealso DMPlexGetCellNumbering()

6473

@*/

6474

PetscErrorCode DMPlexGetVertexNumbering(DM dm, IS *globalVertexNumbers)

6475

{

6476

DM_Plex *mesh = (DM_Plex*) dm->data;

6477

PetscErrorCode ierr;

6478

6479

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6479; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6480

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),6480,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),6480,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),6480,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),6480,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

6481

if (!mesh->globalVertexNumbers) {ierr = DMPlexCreateVertexNumbering_Internal(dm, PETSC_FALSE, &mesh->globalVertexNumbers);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6481,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

6482

*globalVertexNumbers = mesh->globalVertexNumbers;

6483

6484

}

6485

6486

/*@

6487

DMPlexCreatePointNumbering - Create a global numbering for all points on this process

6488

6489

Input Parameter:

6490

. dm - The DMPlex object

6491

6492

Output Parameter:

6493

. globalPointNumbers - Global numbers for all points on this process

6494

6495

Level: developer

6496

6497

.seealso DMPlexGetCellNumbering()

6498

@*/

6499

PetscErrorCode DMPlexCreatePointNumbering(DM dm, IS *globalPointNumbers)

6500

{

6501

IS nums[4];

6502

PetscInt depths[4], gdepths[4], starts[4];

6503

PetscInt depth, d, shift = 0;

6504

PetscErrorCode ierr;

6505

6506

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6506; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6507

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),6507,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),6507,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),6507,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),6507,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

6508

ierr = DMPlexGetDepth(dm, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6508,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6509

/* For unstratified meshes use dim instead of depth */

6510

if (depth < 0) {ierr = DMGetDimension(dm, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6510,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

6511

for (d = 0; d <= depth; ++d) {

6512

PetscInt end;

6513

6514

depths[d] = depth-d;

6515

ierr = DMPlexGetDepthStratum(dm, depths[d], &starts[d], &end);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6515,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6516

if (!(starts[d]-end)) { starts[d] = depths[d] = -1; }

6517

}

6518

ierr = PetscSortIntWithArray(depth+1, starts, depths);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6518,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6519

ierr = MPIU_Allreduce(depths, gdepths, depth+1, MPIU_INT, MPI_MAX, PetscObjectComm((PetscObject) dm))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject) dm)
,depth+1,6519,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm
((PetscObject) dm))),0) || MPI_Allreduce((depths),(gdepths),(
depth+1),(((MPI_Datatype)0x4c000405)),((MPI_Op)(0x58000001)),
(PetscObjectComm((PetscObject) dm)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6519,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6520

for (d = 0; d <= depth; ++d) {

6521

if (starts[d] >= 0 && depths[d] != gdepths[d]) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Expected depth %D, found %D",depths[d],gdepths[d])return PetscError(((MPI_Comm)0x44000001),6521,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,77,PETSC_ERROR_INITIAL,"Expected depth %D, found %D",depths[
d],gdepths[d]);

6522

}

6523

for (d = 0; d <= depth; ++d) {

6524

PetscInt pStart, pEnd, gsize;

6525

6526

ierr = DMPlexGetDepthStratum(dm, gdepths[d], &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6526,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6527

ierr = DMPlexCreateNumbering_Internal(dm, pStart, pEnd, shift, &gsize, dm->sf, &nums[d]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6527,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6528

shift += gsize;

6529

}

6530

ierr = ISConcatenate(PetscObjectComm((PetscObject) dm), depth+1, nums, globalPointNumbers);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6530,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6531

for (d = 0; d <= depth; ++d) {ierr = ISDestroy(&nums[d]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6531,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

6532

6533

}

6534

6535

6536

/*@

6537

DMPlexCreateRankField - Create a cell field whose value is the rank of the owner

6538

6539

Input Parameter:

6540

. dm - The DMPlex object

6541

6542

Output Parameter:

6543

. ranks - The rank field

6544

6545

Options Database Keys:

6546

. -dm_partition_view - Adds the rank field into the DM output from -dm_view using the same viewer

6547

6548

Level: intermediate

6549

6550

.seealso: DMView()

6551

@*/

6552

PetscErrorCode DMPlexCreateRankField(DM dm, Vec *ranks)

6553

{

6554

DM rdm;

6555

PetscFE fe;

6556

PetscScalar *r;

6557

PetscMPIInt rank;

6558

PetscInt dim, cStart, cEnd, c;

6559

PetscErrorCode ierr;

6560

6561

PetscFunctionBeginUserdo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6561; petscstack->
petscroutine[petscstack->currentsize] = PETSC_FALSE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6562

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),6562,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),6562,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),6562,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),6562,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

6563

PetscValidPointer(ranks, 2)do { if (!ranks) return PetscError(((MPI_Comm)0x44000001),6563
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",2); if
(!PetscCheckPointer(ranks,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),6563,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",2);
} while (0);

6564

ierr = MPI_Comm_rank(PetscObjectComm((PetscObject) dm), &rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6564,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6565

ierr = DMClone(dm, &rdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6565,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6566

ierr = DMGetDimension(rdm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6566,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6567

ierr = PetscFECreateDefault(PetscObjectComm((PetscObject) rdm), dim, 1, PETSC_TRUE, "PETSc___rank_", -1, &fe);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6567,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6568

ierr = PetscObjectSetName((PetscObject) fe, "rank");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6568,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6569

ierr = DMSetField(rdm, 0, NULL((void*)0), (PetscObject) fe);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6569,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6570

ierr = PetscFEDestroy(&fe);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6570,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6571

ierr = DMCreateDS(rdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6571,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6572

ierr = DMPlexGetHeightStratum(rdm, 0, &cStart, &cEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6572,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6573

ierr = DMCreateGlobalVector(rdm, ranks);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6573,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6574

ierr = PetscObjectSetName((PetscObject) *ranks, "partition");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6574,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6575

ierr = VecGetArray(*ranks, &r);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6575,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6576

for (c = cStart; c < cEnd; ++c) {

6577

PetscScalar *lr;

6578

6579

ierr = DMPlexPointGlobalRef(rdm, c, r, &lr);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6579,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6580

*lr = rank;

6581

}

6582

ierr = VecRestoreArray(*ranks, &r);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6582,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6583

ierr = DMDestroy(&rdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6583,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6584

6585

}

6586

6587

/*@

6588

DMPlexCreateLabelField - Create a cell field whose value is the label value for that cell

6589

6590

Input Parameters:

6591

+ dm - The DMPlex

6592

- label - The DMLabel

6593

6594

Output Parameter:

6595

. val - The label value field

6596

6597

Options Database Keys:

6598

. -dm_label_view - Adds the label value field into the DM output from -dm_view using the same viewer

6599

6600

Level: intermediate

6601

6602

.seealso: DMView()

6603

@*/

6604

PetscErrorCode DMPlexCreateLabelField(DM dm, DMLabel label, Vec *val)

6605

{

6606

DM rdm;

6607

PetscFE fe;

6608

PetscScalar *v;

6609

PetscInt dim, cStart, cEnd, c;

6610

PetscErrorCode ierr;

6611

6612

PetscFunctionBeginUserdo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6612; petscstack->
petscroutine[petscstack->currentsize] = PETSC_FALSE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6613

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),6613,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),6613,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),6613,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),6613,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

6614

PetscValidPointer(label, 2)do { if (!label) return PetscError(((MPI_Comm)0x44000001),6614
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",2); if
(!PetscCheckPointer(label,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),6614,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",2);
} while (0);

6615

PetscValidPointer(val, 3)do { if (!val) return PetscError(((MPI_Comm)0x44000001),6615,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",3); if
(!PetscCheckPointer(val,PETSC_CHAR)) return PetscError(((MPI_Comm
)0x44000001),6615,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",3);
} while (0);

6616

ierr = DMClone(dm, &rdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6616,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6617

ierr = DMGetDimension(rdm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6617,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6618

ierr = PetscFECreateDefault(PetscObjectComm((PetscObject) rdm), dim, 1, PETSC_TRUE, "PETSc___label_value_", -1, &fe);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6618,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6619

ierr = PetscObjectSetName((PetscObject) fe, "label_value");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6619,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6620

ierr = DMSetField(rdm, 0, NULL((void*)0), (PetscObject) fe);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6620,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6621

ierr = PetscFEDestroy(&fe);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6621,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6622

ierr = DMCreateDS(rdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6622,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6623

ierr = DMPlexGetHeightStratum(rdm, 0, &cStart, &cEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6623,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6624

ierr = DMCreateGlobalVector(rdm, val);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6624,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6625

ierr = PetscObjectSetName((PetscObject) *val, "label_value");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6625,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6626

ierr = VecGetArray(*val, &v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6626,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6627

for (c = cStart; c < cEnd; ++c) {

6628

PetscScalar *lv;

6629

PetscInt cval;

6630

6631

ierr = DMPlexPointGlobalRef(rdm, c, v, &lv);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6631,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6632

ierr = DMLabelGetValue(label, c, &cval);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6632,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6633

*lv = cval;

6634

}

6635

ierr = VecRestoreArray(*val, &v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6635,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6636

ierr = DMDestroy(&rdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6636,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6637

6638

}

6639

6640

/*@

6641

DMPlexCheckSymmetry - Check that the adjacency information in the mesh is symmetric.

6642

6643

Input Parameter:

6644

. dm - The DMPlex object

6645

6646

Note: This is a useful diagnostic when creating meshes programmatically.

6647

6648

Level: developer

6649

6650

.seealso: DMCreate(), DMPlexCheckSkeleton(), DMPlexCheckFaces()

6651

@*/

6652

PetscErrorCode DMPlexCheckSymmetry(DM dm)

6653

{

6654

PetscSection coneSection, supportSection;

6655

const PetscInt *cone, *support;

6656

PetscInt coneSize, c, supportSize, s;

6657

PetscInt pStart, pEnd, p, pp, csize, ssize;

6658

PetscBool storagecheck = PETSC_TRUE;

6659

PetscErrorCode ierr;

6660

6661

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6661; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6662

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),6662,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),6662,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),6662,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),6662,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

6663

ierr = DMPlexGetConeSection(dm, &coneSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6663,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6664

ierr = DMPlexGetSupportSection(dm, &supportSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6664,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6665

/* Check that point p is found in the support of its cone points, and vice versa */

6666

ierr = DMPlexGetChart(dm, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6666,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6667

for (p = pStart; p < pEnd; ++p) {

6668

ierr = DMPlexGetConeSize(dm, p, &coneSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6668,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6669

ierr = DMPlexGetCone(dm, p, &cone);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6669,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6670

for (c = 0; c < coneSize; ++c) {

6671

PetscBool dup = PETSC_FALSE;

6672

PetscInt d;

6673

for (d = c-1; d >= 0; --d) {

6674

if (cone[c] == cone[d]) {dup = PETSC_TRUE; break;}

6675

}

6676

ierr = DMPlexGetSupportSize(dm, cone[c], &supportSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6676,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6677

ierr = DMPlexGetSupport(dm, cone[c], &support);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6677,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6678

for (s = 0; s < supportSize; ++s) {

6679

if (support[s] == p) break;

6680

}

6681

if ((s >= supportSize) || (dup && (support[s+1] != p))) {

6682

ierr = PetscPrintf(PETSC_COMM_SELF((MPI_Comm)0x44000001), "p: %D cone: ", p);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6682,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6683

for (s = 0; s < coneSize; ++s) {

6684

ierr = PetscPrintf(PETSC_COMM_SELF((MPI_Comm)0x44000001), "%D, ", cone[s]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6684,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6685

}

6686

ierr = PetscPrintf(PETSC_COMM_SELF((MPI_Comm)0x44000001), "\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6686,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6687

ierr = PetscPrintf(PETSC_COMM_SELF((MPI_Comm)0x44000001), "p: %D support: ", cone[c]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6687,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6688

for (s = 0; s < supportSize; ++s) {

6689

ierr = PetscPrintf(PETSC_COMM_SELF((MPI_Comm)0x44000001), "%D, ", support[s]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6689,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6690

}

6691

ierr = PetscPrintf(PETSC_COMM_SELF((MPI_Comm)0x44000001), "\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6691,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6692

if (dup) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_PLIB, "Point %D not repeatedly found in support of repeated cone point %D", p, cone[c])return PetscError(((MPI_Comm)0x44000001),6692,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,77,PETSC_ERROR_INITIAL,"Point %D not repeatedly found in support of repeated cone point %D"
,p,cone[c]);

6693

else SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_PLIB, "Point %D not found in support of cone point %D", p, cone[c])return PetscError(((MPI_Comm)0x44000001),6693,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,77,PETSC_ERROR_INITIAL,"Point %D not found in support of cone point %D"
,p,cone[c]);

6694

}

6695

}

6696

ierr = DMPlexGetTreeParent(dm, p, &pp, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6696,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6697

if (p != pp) { storagecheck = PETSC_FALSE; continue; }

6698

ierr = DMPlexGetSupportSize(dm, p, &supportSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6698,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6699

ierr = DMPlexGetSupport(dm, p, &support);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6699,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6700

for (s = 0; s < supportSize; ++s) {

6701

ierr = DMPlexGetConeSize(dm, support[s], &coneSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6701,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6702

ierr = DMPlexGetCone(dm, support[s], &cone);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6702,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6703

for (c = 0; c < coneSize; ++c) {

6704

ierr = DMPlexGetTreeParent(dm, cone[c], &pp, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6704,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6705

if (cone[c] != pp) { c = 0; break; }

6706

if (cone[c] == p) break;

6707

}

6708

if (c >= coneSize) {

6709

ierr = PetscPrintf(PETSC_COMM_SELF((MPI_Comm)0x44000001), "p: %D support: ", p);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6709,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6710

for (c = 0; c < supportSize; ++c) {

6711

ierr = PetscPrintf(PETSC_COMM_SELF((MPI_Comm)0x44000001), "%D, ", support[c]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6711,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6712

}

6713

ierr = PetscPrintf(PETSC_COMM_SELF((MPI_Comm)0x44000001), "\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6713,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6714

ierr = PetscPrintf(PETSC_COMM_SELF((MPI_Comm)0x44000001), "p: %D cone: ", support[s]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6714,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6715

for (c = 0; c < coneSize; ++c) {

6716

ierr = PetscPrintf(PETSC_COMM_SELF((MPI_Comm)0x44000001), "%D, ", cone[c]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6716,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6717

}

6718

ierr = PetscPrintf(PETSC_COMM_SELF((MPI_Comm)0x44000001), "\n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6718,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6719

SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_PLIB, "Point %D not found in cone of support point %D", p, support[s])return PetscError(((MPI_Comm)0x44000001),6719,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,77,PETSC_ERROR_INITIAL,"Point %D not found in cone of support point %D"
,p,support[s]);

6720

}

6721

}

6722

}

6723

if (storagecheck) {

6724

ierr = PetscSectionGetStorageSize(coneSection, &csize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6724,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6725

ierr = PetscSectionGetStorageSize(supportSection, &ssize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6725,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6726

if (csize != ssize) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Total cone size %D != Total support size %D", csize, ssize)return PetscError(((MPI_Comm)0x44000001),6726,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,60,PETSC_ERROR_INITIAL,"Total cone size %D != Total support size %D"
,csize,ssize);

6727

}

6728

6729

}

6730

6731

/*@

6732

DMPlexCheckSkeleton - Check that each cell has the correct number of vertices

6733

6734

Input Parameters:

6735

+ dm - The DMPlex object

6736

- cellHeight - Normally 0

6737

6738

Note: This is a useful diagnostic when creating meshes programmatically.

6739

Currently applicable only to homogeneous simplex or tensor meshes.

6740

6741

Level: developer

6742

6743

.seealso: DMCreate(), DMPlexCheckSymmetry(), DMPlexCheckFaces()

6744

@*/

6745

PetscErrorCode DMPlexCheckSkeleton(DM dm, PetscInt cellHeight)

6746

{

6747

PetscInt dim, numCorners, numHybridCorners, vStart, vEnd, cStart, cEnd, cMax, c;

6748

PetscBool isSimplex = PETSC_FALSE;

6749

PetscErrorCode ierr;

6750

6751

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6751; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6752

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),6752,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),6752,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),6752,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),6752,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

6753

ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6753,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6754

ierr = DMPlexGetHeightStratum(dm, cellHeight, &cStart, &cEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6754,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6755

if (cStart < cEnd) {

6756

ierr = DMPlexGetConeSize(dm, cStart, &c);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6756,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6757

isSimplex = c == dim+1 ? PETSC_TRUE : PETSC_FALSE;

6758

}

6759

switch (dim) {

6760

case 1: numCorners = isSimplex ? 2 : 2; numHybridCorners = isSimplex ? 2 : 2; break;

6761

case 2: numCorners = isSimplex ? 3 : 4; numHybridCorners = isSimplex ? 4 : 4; break;

6762

case 3: numCorners = isSimplex ? 4 : 8; numHybridCorners = isSimplex ? 6 : 8; break;

6763

default:

6764

SETERRQ1(PetscObjectComm((PetscObject) dm), PETSC_ERR_ARG_OUTOFRANGE, "Cannot handle meshes of dimension %D", dim)return PetscError(PetscObjectComm((PetscObject) dm),6764,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",63,PETSC_ERROR_INITIAL
,"Cannot handle meshes of dimension %D",dim);

6765

}

6766

ierr = DMPlexGetDepthStratum(dm, 0, &vStart, &vEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6766,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6767

ierr = DMPlexGetHybridBounds(dm, &cMax, NULL((void*)0), NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6767,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6768

cMax = cMax >= 0 ? cMax : cEnd;

6769

for (c = cStart; c < cMax; ++c) {

6770

PetscInt *closure = NULL((void*)0), closureSize, cl, coneSize = 0;

6771

6772

ierr = DMPlexGetTransitiveClosure(dm, c, PETSC_TRUE, &closureSize, &closure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6772,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6773

for (cl = 0; cl < closureSize*2; cl += 2) {

6774

const PetscInt p = closure[cl];

6775

if ((p >= vStart) && (p < vEnd)) ++coneSize;

6776

}

6777

ierr = DMPlexRestoreTransitiveClosure(dm, c, PETSC_TRUE, &closureSize, &closure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6777,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6778

if (coneSize != numCorners) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Cell %D has %D vertices != %D", c, coneSize, numCorners)return PetscError(((MPI_Comm)0x44000001),6778,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,62,PETSC_ERROR_INITIAL,"Cell %D has %D vertices != %D",c,coneSize
,numCorners);

6779

}

6780

for (c = cMax; c < cEnd; ++c) {

6781

PetscInt *closure = NULL((void*)0), closureSize, cl, coneSize = 0;

6782

6783

ierr = DMPlexGetTransitiveClosure(dm, c, PETSC_TRUE, &closureSize, &closure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6783,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6784

for (cl = 0; cl < closureSize*2; cl += 2) {

6785

const PetscInt p = closure[cl];

6786

if ((p >= vStart) && (p < vEnd)) ++coneSize;

6787

}

6788

ierr = DMPlexRestoreTransitiveClosure(dm, c, PETSC_TRUE, &closureSize, &closure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6788,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6789

if (coneSize > numHybridCorners) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Hybrid cell %D has %D vertices > %D", c, coneSize, numHybridCorners)return PetscError(((MPI_Comm)0x44000001),6789,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,62,PETSC_ERROR_INITIAL,"Hybrid cell %D has %D vertices > %D"
,c,coneSize,numHybridCorners);

6790

}

6791

6792

}

6793

6794

/*@

6795

DMPlexCheckFaces - Check that the faces of each cell give a vertex order this is consistent with what we expect from the cell type

6796

6797

Input Parameters:

6798

+ dm - The DMPlex object

6799

- cellHeight - Normally 0

6800

6801

Note: This is a useful diagnostic when creating meshes programmatically.

6802

6803

Level: developer

6804

6805

.seealso: DMCreate(), DMPlexCheckSymmetry(), DMPlexCheckSkeleton()

6806

@*/

6807

PetscErrorCode DMPlexCheckFaces(DM dm, PetscInt cellHeight)

6808

{

6809

PetscInt pMax[4];

6810

PetscInt dim, depth, vStart, vEnd, cStart, cEnd, c, h;

6811

PetscErrorCode ierr;

6812

6813

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6813; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6814

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),6814,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),6814,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),6814,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),6814,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

6815

ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6815,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6816

ierr = DMPlexGetDepth(dm, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6816,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6817

ierr = DMPlexGetDepthStratum(dm, 0, &vStart, &vEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6817,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6818

ierr = DMPlexGetHybridBounds(dm, &pMax[dim], &pMax[dim-1], &pMax[1], &pMax[0]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6818,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6819

for (h = cellHeight; h < PetscMin(depth, dim)(((depth)<(dim)) ? (depth) : (dim)); ++h) {

6820

ierr = DMPlexGetHeightStratum(dm, h, &cStart, &cEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6820,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6821

for (c = cStart; c < cEnd; ++c) {

6822

const PetscInt *cone, *ornt, *faces;

6823

PetscInt numFaces, faceSize, coneSize,f;

6824

PetscInt *closure = NULL((void*)0), closureSize, cl, numCorners = 0;

6825

6826

if (pMax[dim-h] >= 0 && c >= pMax[dim-h]) continue;

6827

ierr = DMPlexGetConeSize(dm, c, &coneSize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6827,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6828

ierr = DMPlexGetCone(dm, c, &cone);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6828,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6829

ierr = DMPlexGetConeOrientation(dm, c, &ornt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6829,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6830

ierr = DMPlexGetTransitiveClosure(dm, c, PETSC_TRUE, &closureSize, &closure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6830,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6831

for (cl = 0; cl < closureSize*2; cl += 2) {

6832

const PetscInt p = closure[cl];

6833

if ((p >= vStart) && (p < vEnd)) closure[numCorners++] = p;

6834

}

6835

ierr = DMPlexGetRawFaces_Internal(dm, dim-h, numCorners, closure, &numFaces, &faceSize, &faces);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6835,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6836

if (coneSize != numFaces) SETERRQ3(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Cell %D has %D faces but should have %D", c, coneSize, numFaces)return PetscError(((MPI_Comm)0x44000001),6836,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,62,PETSC_ERROR_INITIAL,"Cell %D has %D faces but should have %D"
,c,coneSize,numFaces);

6837

for (f = 0; f < numFaces; ++f) {

6838

PetscInt *fclosure = NULL((void*)0), fclosureSize, cl, fnumCorners = 0, v;

6839

6840

ierr = DMPlexGetTransitiveClosure_Internal(dm, cone[f], ornt[f], PETSC_TRUE, &fclosureSize, &fclosure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6840,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6841

for (cl = 0; cl < fclosureSize*2; cl += 2) {

6842

const PetscInt p = fclosure[cl];

6843

if ((p >= vStart) && (p < vEnd)) fclosure[fnumCorners++] = p;

6844

}

6845

if (fnumCorners != faceSize) SETERRQ5(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Face %D (%D) of cell %D has %D vertices but should have %D", cone[f], f, c, fnumCorners, faceSize)return PetscError(((MPI_Comm)0x44000001),6845,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,62,PETSC_ERROR_INITIAL,"Face %D (%D) of cell %D has %D vertices but should have %D"
,cone[f],f,c,fnumCorners,faceSize);

6846

for (v = 0; v < fnumCorners; ++v) {

6847

if (fclosure[v] != faces[f*faceSize+v]) SETERRQ6(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Face %D (%d) of cell %D vertex %D, %D != %D", cone[f], f, c, v, fclosure[v], faces[f*faceSize+v])return PetscError(((MPI_Comm)0x44000001),6847,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,62,PETSC_ERROR_INITIAL,"Face %D (%d) of cell %D vertex %D, %D != %D"
,cone[f],f,c,v,fclosure[v],faces[f*faceSize+v]);

6848

}

6849

ierr = DMPlexRestoreTransitiveClosure(dm, cone[f], PETSC_TRUE, &fclosureSize, &fclosure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6849,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6850

}

6851

ierr = DMPlexRestoreFaces_Internal(dm, dim, c, &numFaces, &faceSize, &faces);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6851,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6852

ierr = DMPlexRestoreTransitiveClosure(dm, c, PETSC_TRUE, &closureSize, &closure);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6852,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6853

}

6854

}

6855

6856

}

6857

6858

/*@

6859

DMPlexCheckGeometry - Check the geometry of mesh cells

6860

6861

Input Parameter:

6862

. dm - The DMPlex object

6863

6864

Note: This is a useful diagnostic when creating meshes programmatically.

6865

6866

Level: developer

6867

6868

.seealso: DMCreate(), DMCheckSymmetry(), DMCheckSkeleton(), DMCheckFaces()

6869

@*/

6870

PetscErrorCode DMPlexCheckGeometry(DM dm)

6871

{

6872

PetscReal detJ, J[9], refVol = 1.0;

6873

PetscReal vol;

6874

PetscInt dim, depth, d, cStart, cEnd, c;

6875

PetscErrorCode ierr;

6876

6877

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6877; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6878

ierr = DMGetDimension(dm, &dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6878,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6879

ierr = DMPlexGetDepth(dm, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6879,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6880

for (d = 0; d < dim; ++d) refVol *= 2.0;

6881

ierr = DMPlexGetHeightStratum(dm, 0, &cStart, &cEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6881,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6882

for (c = cStart; c < cEnd; ++c) {

6883

ierr = DMPlexComputeCellGeometryFEM(dm, c, NULL((void*)0), NULL((void*)0), J, NULL((void*)0), &detJ);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6883,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6884

if (detJ <= 0.0) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Mesh cell %D is inverted, |J| = %g", c, (double) detJ)return PetscError(((MPI_Comm)0x44000001),6884,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,62,PETSC_ERROR_INITIAL,"Mesh cell %D is inverted, |J| = %g",
c,(double) detJ);

6885

ierr = PetscInfo2(dm, "Cell %D FEM Volume %g\n", c, (double) detJ*refVol)PetscInfo_Private(__func__,dm,"Cell %D FEM Volume %g\n",c,(double
) detJ*refVol);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6885,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6886

if (depth > 1) {

6887

ierr = DMPlexComputeCellGeometryFVM(dm, c, &vol, NULL((void*)0), NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6887,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6888

if (vol <= 0.0) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Mesh cell %d is inverted, vol = %g", c, (double) vol)return PetscError(((MPI_Comm)0x44000001),6888,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,62,PETSC_ERROR_INITIAL,"Mesh cell %d is inverted, vol = %g",
c,(double) vol);

6889

ierr = PetscInfo2(dm, "Cell %D FVM Volume %g\n", c, (double) vol)PetscInfo_Private(__func__,dm,"Cell %D FVM Volume %g\n",c,(double
) vol);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6889,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6890

}

6891

}

6892

6893

}

6894

6895

static PetscErrorCode DMPlexAreAllConePointsInArray_Private(DM dm, PetscInt p, PetscInt npoints, const PetscInt *points, PetscInt *missingPoint)

6896

{

6897

PetscInt i,l,n;

6898

const PetscInt *cone;

6899

PetscErrorCode ierr;

6900

6901

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6901; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6902

*missingPoint = -1;

6903

ierr = DMPlexGetConeSize(dm, p, &n);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6903,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6904

ierr = DMPlexGetCone(dm, p, &cone);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6904,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6905

for (i=0; i<n; i++) {

6906

ierr = PetscFindInt(cone[i], npoints, points, &l);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6906,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6907

if (l < 0) {

6908

*missingPoint = cone[i];

6909

break;

6910

}

6911

}

6912

6913

}

6914

6915

/*@

6916

DMPlexCheckPointSF - Check that several sufficient conditions are met for the point SF of this plex.

6917

6918

Input Parameters:

6919

. dm - The DMPlex object

6920

6921

Note: This is mainly intended for debugging/testing purposes.

6922

6923

Level: developer

6924

6925

.seealso: DMGetPointSF(), DMPlexCheckSymmetry(), DMPlexCheckSkeleton(), DMPlexCheckFaces()

6926

@*/

6927

PetscErrorCode DMPlexCheckPointSF(DM dm)

6928

{

6929

PetscSF sf;

6930

PetscInt d,depth,i,nleaves,p,plo,phi,missingPoint;

6931

const PetscInt *locals;

6932

PetscErrorCode ierr;

6933

6934

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 6934; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

6935

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),6935,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),6935,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),6935,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),6935,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

6936

ierr = DMPlexGetDepth(dm, &depth);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6936,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6937

ierr = DMGetPointSF(dm, &sf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6937,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6938

ierr = PetscSFGetGraph(sf, NULL((void*)0), &nleaves, &locals, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6938,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6939

6940

/* 1) check there are no faces in 2D, cells in 3D, in interface */

6941

ierr = DMPlexGetVTKCellHeight(dm, &d);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6941,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6942

ierr = DMPlexGetHeightStratum(dm, d, &plo, &phi);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6942,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6943

for (i=0; i<nleaves; i++) {

6944

p = locals[i];

6945

if (p >= plo && p < phi) SETERRQ1(PETSC_COMM_SELF, PETSC_ERR_PLIB, "point SF contains %d which is a cell",p)return PetscError(((MPI_Comm)0x44000001),6945,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,77,PETSC_ERROR_INITIAL,"point SF contains %d which is a cell"
,p);

6946

}

6947

6948

/* 2) if some point is in interface, then all its cone points must be also in interface */

6949

for (i=0; i<nleaves; i++) {

6950

p = locals[i];

6951

ierr = DMPlexAreAllConePointsInArray_Private(dm, p, nleaves, locals, &missingPoint);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),6951,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

6952

if (missingPoint >= 0) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_PLIB, "point SF contains %d but not %d from its cone",p,missingPoint)return PetscError(((MPI_Comm)0x44000001),6952,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,77,PETSC_ERROR_INITIAL,"point SF contains %d but not %d from its cone"
,p,missingPoint);

6953

}

6954

6955

}

6956

6957

typedef struct cell_stats

6958

{

6959

PetscReal min, max, sum, squaresum;

6960

PetscInt count;

6961

} cell_stats_t;

6962

6963

static void cell_stats_reduce(void *a, void *b, int * len, MPI_Datatype *datatype)

6964

{

6965

PetscInt i, N = *len;

6966

6967

for (i = 0; i < N; i++) {

6968

cell_stats_t *A = (cell_stats_t *) a;

6969

cell_stats_t *B = (cell_stats_t *) b;

6970

6971

B->min = PetscMin(A->min,B->min)(((A->min)<(B->min)) ? (A->min) : (B->min));

6972

B->max = PetscMax(A->max,B->max)(((A->max)<(B->max)) ? (B->max) : (A->max));

6973

B->sum += A->sum;

6974

B->squaresum += A->squaresum;

6975

B->count += A->count;

6976

}

6977

}

6978

6979

/*@

6980

DMPlexCheckCellShape - Checks the Jacobian of the mapping and computes some minimal statistics.

6981

6982

Input Parameters:

6983

+ dm - The DMPlex object

6984

- output - If true, statistics will be displayed on stdout

6985

6986

Note: This is mainly intended for debugging/testing purposes.

6987

6988

Level: developer

6989

6990

.seealso: DMPlexCheckSymmetry(), DMPlexCheckSkeleton(), DMPlexCheckFaces()

6991

@*/

6992

PetscErrorCode DMPlexCheckCellShape(DM dm, PetscBool output)

6993

{

6994

PetscMPIInt rank,size;

6995

PetscInt dim, c, cStart, cEnd, cMax, count = 0;

6996

cell_stats_t stats, globalStats;

6997

PetscReal *J, *invJ, min = 0, max = 0, mean = 0, stdev = 0;

6998

MPI_Comm comm = PetscObjectComm((PetscObject)dm);

6999

DM dmCoarse;

7000

PetscErrorCode ierr;

7001

7002

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 7002; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

7003

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),7003,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),7003,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),7003,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),7003,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

7004

stats.min = PETSC_MAX_REAL1.7976931348623157e+308;

7005

stats.max = PETSC_MIN_REAL(-1.7976931348623157e+308);

7006

stats.sum = stats.squaresum = 0.;

7007

stats.count = 0;

7008

7009

ierr = DMGetCoordinateDim(dm,&dim);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7009,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7010

ierr = PetscMalloc2(dim * dim, &J, dim * dim, &invJ)PetscMallocA(2,PETSC_FALSE,7010,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(dim * dim)*sizeof(**(&J)),(&J),(size_t)(dim
* dim)*sizeof(**(&invJ)),(&invJ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7010,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7011

ierr = DMPlexGetHeightStratum(dm,0,&cStart,&cEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7011,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7012

ierr = DMPlexGetHybridBounds(dm,&cMax,NULL((void*)0),NULL((void*)0),NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7012,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7013

cMax = cMax < 0 ? cEnd : cMax;

7014

for (c = cStart; c < cMax; c++) {

7015

PetscInt i;

7016

PetscReal frobJ = 0., frobInvJ = 0., cond2, cond, detJ;

7017

7018

ierr = DMPlexComputeCellGeometryAffineFEM(dm,c,NULL((void*)0),J,invJ,&detJ);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7018,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7019

if (detJ < 0.0) SETERRQ1(PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Mesh cell %D is inverted", c)return PetscError(((MPI_Comm)0x44000001),7019,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,62,PETSC_ERROR_INITIAL,"Mesh cell %D is inverted",c);

7020

for (i = 0; i < dim * dim; i++) {

7021

frobJ += J[i] * J[i];

7022

frobInvJ += invJ[i] * invJ[i];

7023

}

7024

cond2 = frobJ * frobInvJ;

7025

cond = PetscSqrtReal(cond2)sqrt(cond2);

7026

7027

stats.min = PetscMin(stats.min,cond)(((stats.min)<(cond)) ? (stats.min) : (cond));

7028

stats.max = PetscMax(stats.max,cond)(((stats.max)<(cond)) ? (cond) : (stats.max));

7029

stats.sum += cond;

7030

stats.squaresum += cond2;

7031

stats.count++;

7032

}

7033

7034

ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7034,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7035

if (size > 1) {

7036

PetscMPIInt blockLengths[2] = {4,1};

7037

MPI_Aint blockOffsets[2] = {offsetof(cell_stats_t,min)__builtin_offsetof(cell_stats_t, min),offsetof(cell_stats_t,count)__builtin_offsetof(cell_stats_t, count)};

7038

MPI_Datatype blockTypes[2] = {MPIU_REAL((MPI_Datatype)0x4c00080b),MPIU_INT((MPI_Datatype)0x4c000405)}, statType;

7039

MPI_Op statReduce;

7040

7041

ierr = MPI_Type_create_struct(2,blockLengths,blockOffsets,blockTypes,&statType);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7041,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7042

ierr = MPI_Type_commit(&statType);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7042,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7043

ierr = MPI_Op_create(cell_stats_reduce, PETSC_TRUE, &statReduce);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7043,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7044

ierr = MPI_Reduce(&stats,&globalStats,1,statType,statReduce,0,comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7044,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7045

ierr = MPI_Op_free(&statReduce);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7045,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7046

ierr = MPI_Type_free(&statType);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7046,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7047

} else {

7048

ierr = PetscArraycpy(&globalStats,&stats,1)((sizeof(*(&globalStats)) != sizeof(*(&stats))) || PetscMemcpy
(&globalStats,&stats,(1)*sizeof(*(&globalStats)))
);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7048,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7049

}

7050

7051

ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7051,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7052

if (!rank) {

7053

count = globalStats.count;

7054

min = globalStats.min;

7055

max = globalStats.max;

7056

mean = globalStats.sum / globalStats.count;

7057

stdev = globalStats.count > 1 ? PetscSqrtReal(PetscMax((globalStats.squaresum - globalStats.count * mean * mean) / (globalStats.count - 1),0))sqrt(((((globalStats.squaresum - globalStats.count * mean * mean
) / (globalStats.count - 1))<(0)) ? (0) : ((globalStats.squaresum
- globalStats.count * mean * mean) / (globalStats.count - 1)
))) : 0.0;

7058

}

7059

7060

if (output) {

7061

ierr = PetscPrintf(comm,"Mesh with %D cells, shape condition numbers: min = %g, max = %g, mean = %g, stddev = %g\n", count, (double) min, (double) max, (double) mean, (double) stdev);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7061,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7062

}

7063

ierr = PetscFree2(J,invJ)PetscFreeA(2,7063,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,&(J),&(invJ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7063,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7064

7065

ierr = DMGetCoarseDM(dm,&dmCoarse);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7065,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7066

if (dmCoarse) {

7067

PetscBool isplex;

7068

7069

ierr = PetscObjectTypeCompare((PetscObject)dmCoarse,DMPLEX"plex",&isplex);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7069,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7070

if (isplex) {

7071

ierr = DMPlexCheckCellShape(dmCoarse,output);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7071,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7072

}

7073

}

7074

7075

}

7076

7077

/* Pointwise interpolation

7078

Just code FEM for now

7079

u^f = I u^c

7080

sum_k u^f_k phi^f_k = I sum_j u^c_j phi^c_j

7081

u^f_i = sum_j psi^f_i I phi^c_j u^c_j

7082

I_{ij} = psi^f_i phi^c_j

7083

7084

PetscErrorCode DMCreateInterpolation_Plex(DM dmCoarse, DM dmFine, Mat *interpolation, Vec *scaling)

7085

{

7086

PetscSection gsc, gsf;

7087

PetscInt m, n;

7088

void *ctx;

7089

DM cdm;

7090

PetscBool regular, ismatis;

7091

PetscErrorCode ierr;

7092

7093

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 7093; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

7094

ierr = DMGetGlobalSection(dmFine, &gsf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7094,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7095

ierr = PetscSectionGetConstrainedStorageSize(gsf, &m);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7095,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7096

ierr = DMGetGlobalSection(dmCoarse, &gsc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7096,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7097

ierr = PetscSectionGetConstrainedStorageSize(gsc, &n);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7097,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7098

7099

ierr = PetscStrcmp(dmCoarse->mattype, MATIS"is", &ismatis);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7099,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7100

ierr = MatCreate(PetscObjectComm((PetscObject) dmCoarse), interpolation);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7100,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7101

ierr = MatSetSizes(*interpolation, m, n, PETSC_DETERMINE-1, PETSC_DETERMINE-1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7101,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7102

ierr = MatSetType(*interpolation, ismatis ? MATAIJ"aij" : dmCoarse->mattype);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7102,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7103

ierr = DMGetApplicationContext(dmFine, &ctx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7103,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7104

7105

ierr = DMGetCoarseDM(dmFine, &cdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7105,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7106

ierr = DMPlexGetRegularRefinement(dmFine, &regular);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7106,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7107

if (regular && cdm == dmCoarse) {ierr = DMPlexComputeInterpolatorNested(dmCoarse, dmFine, *interpolation, ctx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7107,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

7108

else {ierr = DMPlexComputeInterpolatorGeneral(dmCoarse, dmFine, *interpolation, ctx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7108,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

7109

ierr = MatViewFromOptions(*interpolation, NULL((void*)0), "-interp_mat_view");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7109,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7110

if (scaling) {

7111

/* Use naive scaling */

7112

ierr = DMCreateInterpolationScale(dmCoarse, dmFine, *interpolation, scaling);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7112,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7113

}

7114

7115

}

7116

7117

PetscErrorCode DMCreateInjection_Plex(DM dmCoarse, DM dmFine, Mat *mat)

7118

{

7119

PetscErrorCode ierr;

7120

VecScatter ctx;

7121

7122

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 7122; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

7123

ierr = DMPlexComputeInjectorFEM(dmCoarse, dmFine, &ctx, NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7123,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7124

ierr = MatCreateScatter(PetscObjectComm((PetscObject)ctx), ctx, mat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7124,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7125

ierr = VecScatterDestroy(&ctx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7125,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7126

7127

}

7128

7129

PetscErrorCode DMCreateMassMatrix_Plex(DM dmCoarse, DM dmFine, Mat *mass)

7130

{

7131

PetscSection gsc, gsf;

7132

PetscInt m, n;

7133

void *ctx;

7134

DM cdm;

7135

PetscBool regular;

7136

PetscErrorCode ierr;

7137

7138

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 7138; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

7139

ierr = DMGetGlobalSection(dmFine, &gsf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7139,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7140

ierr = PetscSectionGetConstrainedStorageSize(gsf, &m);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7140,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7141

ierr = DMGetGlobalSection(dmCoarse, &gsc);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7141,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7142

ierr = PetscSectionGetConstrainedStorageSize(gsc, &n);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7142,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7143

7144

ierr = MatCreate(PetscObjectComm((PetscObject) dmCoarse), mass);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7144,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7145

ierr = MatSetSizes(*mass, m, n, PETSC_DETERMINE-1, PETSC_DETERMINE-1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7145,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7146

ierr = MatSetType(*mass, dmCoarse->mattype);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7146,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7147

ierr = DMGetApplicationContext(dmFine, &ctx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7147,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7148

7149

ierr = DMGetCoarseDM(dmFine, &cdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7149,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7150

ierr = DMPlexGetRegularRefinement(dmFine, &regular);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7150,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7151

if (regular && cdm == dmCoarse) {ierr = DMPlexComputeMassMatrixNested(dmCoarse, dmFine, *mass, ctx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7151,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

7152

else {ierr = DMPlexComputeMassMatrixGeneral(dmCoarse, dmFine, *mass, ctx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7152,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

7153

ierr = MatViewFromOptions(*mass, NULL((void*)0), "-mass_mat_view");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7153,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7154

7155

}

7156

7157

/*@

7158

DMPlexGetRegularRefinement - Get the flag indicating that this mesh was obtained by regular refinement from its coarse mesh

7159

7160

Input Parameter:

7161

. dm - The DMPlex object

7162

7163

Output Parameter:

7164

. regular - The flag

7165

7166

Level: intermediate

7167

7168

.seealso: DMPlexSetRegularRefinement()

7169

@*/

7170

PetscErrorCode DMPlexGetRegularRefinement(DM dm, PetscBool *regular)

7171

{

7172

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 7172; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

7173

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),7173,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),7173,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),7173,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),7173,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

7174

PetscValidPointer(regular, 2)do { if (!regular) return PetscError(((MPI_Comm)0x44000001),7174
,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Pointer: Parameter # %d",2); if
(!PetscCheckPointer(regular,PETSC_CHAR)) return PetscError((
(MPI_Comm)0x44000001),7174,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,68,PETSC_ERROR_INITIAL,"Invalid Pointer: Parameter # %d",2);
} while (0);

7175

*regular = ((DM_Plex *) dm->data)->regularRefinement;

7176

7177

}

7178

7179

/*@

7180

DMPlexSetRegularRefinement - Set the flag indicating that this mesh was obtained by regular refinement from its coarse mesh

7181

7182

Input Parameters:

7183

+ dm - The DMPlex object

7184

- regular - The flag

7185

7186

Level: intermediate

7187

7188

.seealso: DMPlexGetRegularRefinement()

7189

@*/

7190

PetscErrorCode DMPlexSetRegularRefinement(DM dm, PetscBool regular)

7191

{

7192

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 7192; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

7193

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),7193,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),7193,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),7193,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),7193,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

7194

((DM_Plex *) dm->data)->regularRefinement = regular;

7195

7196

}

7197

7198

/* anchors */

7199

/*@

7200

DMPlexGetAnchors - Get the layout of the anchor (point-to-point) constraints. Typically, the user will not have to

7201

call DMPlexGetAnchors() directly: if there are anchors, then DMPlexGetAnchors() is called during DMGetConstraints().

7202

7203

not collective

7204

7205

Input Parameters:

7206

. dm - The DMPlex object

7207

7208

Output Parameters:

7209

+ anchorSection - If not NULL, set to the section describing which points anchor the constrained points.

7210

- anchorIS - If not NULL, set to the list of anchors indexed by anchorSection

7211

7212

7213

Level: intermediate

7214

7215

.seealso: DMPlexSetAnchors(), DMGetConstraints(), DMSetConstraints()

7216

@*/

7217

PetscErrorCode DMPlexGetAnchors(DM dm, PetscSection *anchorSection, IS *anchorIS)

7218

{

7219

DM_Plex *plex = (DM_Plex *)dm->data;

7220

PetscErrorCode ierr;

7221

7222

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 7222; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

7223

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),7223,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),7223,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),7223,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),7223,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

7224

if (!plex->anchorSection && !plex->anchorIS && plex->createanchors) {ierr = (*plex->createanchors)(dm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7224,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

7225

if (anchorSection) *anchorSection = plex->anchorSection;

7226

if (anchorIS) *anchorIS = plex->anchorIS;

7227

7228

}

7229

7230

/*@

7231

DMPlexSetAnchors - Set the layout of the local anchor (point-to-point) constraints. Unlike boundary conditions,

7232

when a point's degrees of freedom in a section are constrained to an outside value, the anchor constraints set a

7233

point's degrees of freedom to be a linear combination of other points' degrees of freedom.

7234

7235

After specifying the layout of constraints with DMPlexSetAnchors(), one specifies the constraints by calling

7236

DMGetConstraints() and filling in the entries in the constraint matrix.

7237

7238

collective on dm

7239

7240

Input Parameters:

7241

+ dm - The DMPlex object

7242

. anchorSection - The section that describes the mapping from constrained points to the anchor points listed in anchorIS. Must have a local communicator (PETSC_COMM_SELF or derivative).

7243

- anchorIS - The list of all anchor points. Must have a local communicator (PETSC_COMM_SELF or derivative).

7244

7245

The reference counts of anchorSection and anchorIS are incremented.

7246

7247

Level: intermediate

7248

7249

.seealso: DMPlexGetAnchors(), DMGetConstraints(), DMSetConstraints()

7250

@*/

7251

PetscErrorCode DMPlexSetAnchors(DM dm, PetscSection anchorSection, IS anchorIS)

7252

{

7253

DM_Plex *plex = (DM_Plex *)dm->data;

7254

PetscMPIInt result;

7255

PetscErrorCode ierr;

7256

7257

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 7257; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

7258

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),7258,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),7258,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),7258,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),7258,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

7259

if (anchorSection) {

7260

PetscValidHeaderSpecific(anchorSection,PETSC_SECTION_CLASSID,2)do { if (!anchorSection) return PetscError(((MPI_Comm)0x44000001
),7260,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",2); if (
!PetscCheckPointer(anchorSection,PETSC_OBJECT)) return PetscError
(((MPI_Comm)0x44000001),7260,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,2); if (((PetscObject)(anchorSection))->classid != PETSC_SECTION_CLASSID
) { if (((PetscObject)(anchorSection))->classid == -1) return
PetscError(((MPI_Comm)0x44000001),7260,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,2); else return PetscError(((MPI_Comm)0x44000001),7260,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",2); } } while (0);

7261

ierr = MPI_Comm_compare(PETSC_COMM_SELF((MPI_Comm)0x44000001),PetscObjectComm((PetscObject)anchorSection),&result);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7261,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7262

if (result != MPI_CONGRUENT1 && result != MPI_IDENT0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMECOMM,"anchor section must have local communicator")return PetscError(((MPI_Comm)0x44000001),7262,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,80,PETSC_ERROR_INITIAL,"anchor section must have local communicator"
);

7263

}

7264

if (anchorIS) {

7265

PetscValidHeaderSpecific(anchorIS,IS_CLASSID,3)do { if (!anchorIS) return PetscError(((MPI_Comm)0x44000001),
7265,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",3); if (
!PetscCheckPointer(anchorIS,PETSC_OBJECT)) return PetscError(
((MPI_Comm)0x44000001),7265,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,3); if (((PetscObject)(anchorIS))->classid != IS_CLASSID)
{ if (((PetscObject)(anchorIS))->classid == -1) return PetscError
(((MPI_Comm)0x44000001),7265,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,3); else return PetscError(((MPI_Comm)0x44000001),7265,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",3); } } while (0);

7266

ierr = MPI_Comm_compare(PETSC_COMM_SELF((MPI_Comm)0x44000001),PetscObjectComm((PetscObject)anchorIS),&result);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7266,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7267

if (result != MPI_CONGRUENT1 && result != MPI_IDENT0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMECOMM,"anchor IS must have local communicator")return PetscError(((MPI_Comm)0x44000001),7267,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,80,PETSC_ERROR_INITIAL,"anchor IS must have local communicator"
);

7268

}

7269

7270

ierr = PetscObjectReference((PetscObject)anchorSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7270,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7271

ierr = PetscSectionDestroy(&plex->anchorSection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7271,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7272

plex->anchorSection = anchorSection;

7273

7274

ierr = PetscObjectReference((PetscObject)anchorIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7274,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7275

ierr = ISDestroy(&plex->anchorIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7275,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7276

plex->anchorIS = anchorIS;

7277

7278

#if defined(PETSC_USE_DEBUG1)

7279

if (anchorIS && anchorSection) {

7280

PetscInt size, a, pStart, pEnd;

7281

const PetscInt *anchors;

7282

7283

ierr = PetscSectionGetChart(anchorSection,&pStart,&pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7283,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7284

ierr = ISGetLocalSize(anchorIS,&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7284,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7285

ierr = ISGetIndices(anchorIS,&anchors);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7285,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7286

for (a = 0; a < size; a++) {

7287

PetscInt p;

7288

7289

p = anchors[a];

7290

if (p >= pStart && p < pEnd) {

7291

PetscInt dof;

7292

7293

ierr = PetscSectionGetDof(anchorSection,p,&dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7293,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7294

if (dof) {

7295

PetscErrorCode ierr2;

7296

7297

ierr2 = ISRestoreIndices(anchorIS,&anchors);CHKERRQ(ierr2)do {if (__builtin_expect(!!(ierr2),0)) return PetscError(((MPI_Comm
)0x44000001),7297,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr2,PETSC_ERROR_REPEAT," ");} while (0);

7298

SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Point %D cannot be constrained and an anchor",p)return PetscError(((MPI_Comm)0x44000001),7298,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,75,PETSC_ERROR_INITIAL,"Point %D cannot be constrained and an anchor"
,p);

7299

}

7300

}

7301

}

7302

ierr = ISRestoreIndices(anchorIS,&anchors);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7302,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7303

}

7304

#endif

7305

/* reset the generic constraints */

7306

ierr = DMSetDefaultConstraints(dm,NULL((void*)0),NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7306,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7307

7308

}

7309

7310

static PetscErrorCode DMPlexCreateConstraintSection_Anchors(DM dm, PetscSection section, PetscSection *cSec)

7311

{

7312

PetscSection anchorSection;

7313

PetscInt pStart, pEnd, sStart, sEnd, p, dof, numFields, f;

7314

PetscErrorCode ierr;

7315

7316

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 7316; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

7317

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),7317,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),7317,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),7317,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),7317,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

7318

ierr = DMPlexGetAnchors(dm,&anchorSection,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7318,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7319

ierr = PetscSectionCreate(PETSC_COMM_SELF((MPI_Comm)0x44000001),cSec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7319,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7320

ierr = PetscSectionGetNumFields(section,&numFields);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7320,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7321

if (numFields) {

7322

PetscInt f;

7323

ierr = PetscSectionSetNumFields(*cSec,numFields);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7323,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7324

7325

for (f = 0; f < numFields; f++) {

7326

PetscInt numComp;

7327

7328

ierr = PetscSectionGetFieldComponents(section,f,&numComp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7328,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7329

ierr = PetscSectionSetFieldComponents(*cSec,f,numComp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7329,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7330

}

7331

}

7332

ierr = PetscSectionGetChart(anchorSection,&pStart,&pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7332,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7333

ierr = PetscSectionGetChart(section,&sStart,&sEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7333,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7334

pStart = PetscMax(pStart,sStart)(((pStart)<(sStart)) ? (sStart) : (pStart));

7335

pEnd = PetscMin(pEnd,sEnd)(((pEnd)<(sEnd)) ? (pEnd) : (sEnd));

7336

pEnd = PetscMax(pStart,pEnd)(((pStart)<(pEnd)) ? (pEnd) : (pStart));

7337

ierr = PetscSectionSetChart(*cSec,pStart,pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7337,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7338

for (p = pStart; p < pEnd; p++) {

7339

ierr = PetscSectionGetDof(anchorSection,p,&dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7339,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7340

if (dof) {

7341

ierr = PetscSectionGetDof(section,p,&dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7341,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7342

ierr = PetscSectionSetDof(*cSec,p,dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7342,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7343

for (f = 0; f < numFields; f++) {

7344

ierr = PetscSectionGetFieldDof(section,p,f,&dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7344,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7345

ierr = PetscSectionSetFieldDof(*cSec,p,f,dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7345,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7346

}

7347

}

7348

}

7349

ierr = PetscSectionSetUp(*cSec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7349,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7350

7351

}

7352

7353

static PetscErrorCode DMPlexCreateConstraintMatrix_Anchors(DM dm, PetscSection section, PetscSection cSec, Mat *cMat)

7354

{

7355

PetscSection aSec;

7356

PetscInt pStart, pEnd, p, dof, aDof, aOff, off, nnz, annz, m, n, q, a, offset, *i, *j;

'dof' declared without an initial value

→

7357

const PetscInt *anchors;

7358

PetscInt numFields, f;

7359

IS aIS;

7360

PetscErrorCode ierr;

7361

7362

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 7362; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

7363

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),7363,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),7363,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),7363,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),7363,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

7364

ierr = PetscSectionGetStorageSize(cSec, &m);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7364,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7365

ierr = PetscSectionGetStorageSize(section, &n);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7365,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7366

ierr = MatCreate(PETSC_COMM_SELF((MPI_Comm)0x44000001),cMat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7366,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7367

ierr = MatSetSizes(*cMat,m,n,m,n);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7367,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7368

ierr = MatSetType(*cMat,MATSEQAIJ"seqaij");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7368,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7369

ierr = DMPlexGetAnchors(dm,&aSec,&aIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7369,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7370

ierr = ISGetIndices(aIS,&anchors);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7370,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7371

/* cSec will be a subset of aSec and section */

7372

ierr = PetscSectionGetChart(cSec,&pStart,&pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7372,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7373

ierr = PetscMalloc1(m+1,&i)PetscMallocA(1,PETSC_FALSE,7373,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(m+1)*sizeof(**(&i)),(&i));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7373,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7374

i[0] = 0;

7375

ierr = PetscSectionGetNumFields(section,&numFields);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7375,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7376

for (p = pStart; p < pEnd; p++) {

←

Loop condition is true. Entering loop body

→

7377

PetscInt rDof, rOff, r;

7378

7379

ierr = PetscSectionGetDof(aSec,p,&rDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7379,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7380

if (!rDof) continue;

←

Assuming 'rDof' is not equal to 0

→

←

Taking false branch

→

7381

ierr = PetscSectionGetOffset(aSec,p,&rOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7381,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7382

if (numFields) {

←

Assuming 'numFields' is 0

→

←

Taking false branch

→

7383

for (f = 0; f < numFields; f++) {

7384

annz = 0;

7385

for (r = 0; r < rDof; r++) {

7386

a = anchors[rOff + r];

7387

ierr = PetscSectionGetFieldDof(section,a,f,&aDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7387,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7388

annz += aDof;

7389

}

7390

ierr = PetscSectionGetFieldDof(cSec,p,f,&dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7390,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7391

ierr = PetscSectionGetFieldOffset(cSec,p,f,&off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7391,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7392

for (q = 0; q < dof; q++) {

7393

i[off + q + 1] = i[off + q] + annz;

7394

}

7395

}

7396

}

7397

else {

7398

annz = 0;

7399

for (q = 0; q < dof; q++) {

←

The right operand of '<' is a garbage value

7400

a = anchors[off + q];

7401

ierr = PetscSectionGetDof(section,a,&aDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7401,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7402

annz += aDof;

7403

}

7404

ierr = PetscSectionGetDof(cSec,p,&dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7404,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7405

ierr = PetscSectionGetOffset(cSec,p,&off);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7405,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7406

for (q = 0; q < dof; q++) {

7407

i[off + q + 1] = i[off + q] + annz;

7408

}

7409

}

7410

}

7411

nnz = i[m];

7412

ierr = PetscMalloc1(nnz,&j)PetscMallocA(1,PETSC_FALSE,7412,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(nnz)*sizeof(**(&j)),(&j));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7412,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7413

offset = 0;

7414

for (p = pStart; p < pEnd; p++) {

7415

if (numFields) {

7416

for (f = 0; f < numFields; f++) {

7417

ierr = PetscSectionGetFieldDof(cSec,p,f,&dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7417,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7418

for (q = 0; q < dof; q++) {

7419

PetscInt rDof, rOff, r;

7420

ierr = PetscSectionGetDof(aSec,p,&rDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7420,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7421

ierr = PetscSectionGetOffset(aSec,p,&rOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7421,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7422

for (r = 0; r < rDof; r++) {

7423

PetscInt s;

7424

7425

a = anchors[rOff + r];

7426

ierr = PetscSectionGetFieldDof(section,a,f,&aDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7426,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7427

ierr = PetscSectionGetFieldOffset(section,a,f,&aOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7427,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7428

for (s = 0; s < aDof; s++) {

7429

j[offset++] = aOff + s;

7430

}

7431

}

7432

}

7433

}

7434

}

7435

else {

7436

ierr = PetscSectionGetDof(cSec,p,&dof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7436,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7437

for (q = 0; q < dof; q++) {

7438

PetscInt rDof, rOff, r;

7439

ierr = PetscSectionGetDof(aSec,p,&rDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7439,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7440

ierr = PetscSectionGetOffset(aSec,p,&rOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7440,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7441

for (r = 0; r < rDof; r++) {

7442

PetscInt s;

7443

7444

a = anchors[rOff + r];

7445

ierr = PetscSectionGetDof(section,a,&aDof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7445,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7446

ierr = PetscSectionGetOffset(section,a,&aOff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7446,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7447

for (s = 0; s < aDof; s++) {

7448

j[offset++] = aOff + s;

7449

}

7450

}

7451

}

7452

}

7453

}

7454

ierr = MatSeqAIJSetPreallocationCSR(*cMat,i,j,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7454,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7455

ierr = PetscFree(i)((*PetscTrFree)((void*)(i),7455,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((i) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7455,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7456

ierr = PetscFree(j)((*PetscTrFree)((void*)(j),7456,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
) || ((j) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7456,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7457

ierr = ISRestoreIndices(aIS,&anchors);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7457,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7458

7459

}

7460

7461

PetscErrorCode DMCreateDefaultConstraints_Plex(DM dm)

7462

{

7463

DM_Plex *plex = (DM_Plex *)dm->data;

7464

PetscSection anchorSection, section, cSec;

7465

Mat cMat;

7466

PetscErrorCode ierr;

7467

7468

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 7468; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

7469

PetscValidHeaderSpecific(dm, DM_CLASSID, 1)do { if (!dm) return PetscError(((MPI_Comm)0x44000001),7469,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",85,PETSC_ERROR_INITIAL
,"Null Object: Parameter # %d",1); if (!PetscCheckPointer(dm,
PETSC_OBJECT)) return PetscError(((MPI_Comm)0x44000001),7469,
__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d"
,1); if (((PetscObject)(dm))->classid != DM_CLASSID) { if (
((PetscObject)(dm))->classid == -1) return PetscError(((MPI_Comm
)0x44000001),7469,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d"
,1); else return PetscError(((MPI_Comm)0x44000001),7469,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Wrong type of object: Parameter # %d",1); } } while (0);

7470

ierr = DMPlexGetAnchors(dm,&anchorSection,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7470,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7471

if (anchorSection) {

7472

PetscInt Nf;

7473

7474

ierr = DMGetSection(dm,&section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7474,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7475

ierr = DMPlexCreateConstraintSection_Anchors(dm,section,&cSec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7475,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7476

ierr = DMPlexCreateConstraintMatrix_Anchors(dm,section,cSec,&cMat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7476,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7477

ierr = DMGetNumFields(dm,&Nf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7477,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7478

if (Nf && plex->computeanchormatrix) {ierr = (*plex->computeanchormatrix)(dm,section,cSec,cMat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7478,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

7479

ierr = DMSetDefaultConstraints(dm,cSec,cMat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7479,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7480

ierr = PetscSectionDestroy(&cSec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7480,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7481

ierr = MatDestroy(&cMat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7481,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7482

}

7483

7484

}

7485

7486

PetscErrorCode DMCreateSubDomainDM_Plex(DM dm, DMLabel label, PetscInt value, IS *is, DM *subdm)

7487

{

7488

IS subis;

7489

PetscSection section, subsection;

7490

PetscErrorCode ierr;

7491

7492

PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize
< 64)) { petscstack->function[petscstack->currentsize
] = __func__; petscstack->file[petscstack->currentsize]
= "/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"; petscstack
->line[petscstack->currentsize] = 7492; petscstack->
petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack
->currentsize++; } if (petscstack) { petscstack->hotdepth
+= (PETSC_FALSE || petscstack->hotdepth); } ; } while (0)
; ; } while (0);

7493

ierr = DMGetDefaultSection(dm, &section);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7493,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7494

if (!section) SETERRQ(PetscObjectComm((PetscObject) dm), PETSC_ERR_ARG_WRONG, "Must set default section for DM before splitting subdomain")return PetscError(PetscObjectComm((PetscObject) dm),7494,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Must set default section for DM before splitting subdomain"
);

7495

if (!subdm) SETERRQ(PetscObjectComm((PetscObject) dm), PETSC_ERR_ARG_WRONG, "Must set output subDM for splitting subdomain")return PetscError(PetscObjectComm((PetscObject) dm),7495,__func__
,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c",62,PETSC_ERROR_INITIAL
,"Must set output subDM for splitting subdomain");

7496

/* Create subdomain */

7497

ierr = DMPlexFilter(dm, label, value, subdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7497,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7498

/* Create submodel */

7499

ierr = DMPlexCreateSubpointIS(*subdm, &subis);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7499,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7500

ierr = PetscSectionCreateSubmeshSection(section, subis, &subsection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7500,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7501

ierr = ISDestroy(&subis);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7501,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7502

ierr = DMSetDefaultSection(*subdm, subsection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7502,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7503

ierr = PetscSectionDestroy(&subsection);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7503,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7504

ierr = DMCopyDisc(dm, *subdm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7504,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7505

/* Create map from submodel to global model */

7506

if (is) {

7507

PetscSection sectionGlobal, subsectionGlobal;

7508

IS spIS;

7509

const PetscInt *spmap;

7510

PetscInt *subIndices;

7511

PetscInt subSize = 0, subOff = 0, pStart, pEnd, p;

7512

PetscInt Nf, f, bs = -1, bsLocal[2], bsMinMax[2];

7513

7514

ierr = DMPlexCreateSubpointIS(*subdm, &spIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7514,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7515

ierr = ISGetIndices(spIS, &spmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7515,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7516

ierr = PetscSectionGetNumFields(section, &Nf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7516,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7517

ierr = DMGetDefaultGlobalSection(dm, &sectionGlobal);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7517,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7518

ierr = DMGetDefaultGlobalSection(*subdm, &subsectionGlobal);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7518,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7519

ierr = PetscSectionGetChart(subsection, &pStart, &pEnd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7519,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7520

for (p = pStart; p < pEnd; ++p) {

7521

PetscInt gdof, pSubSize = 0;

7522

7523

ierr = PetscSectionGetDof(sectionGlobal, p, &gdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7523,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7524

if (gdof > 0) {

7525

for (f = 0; f < Nf; ++f) {

7526

PetscInt fdof, fcdof;

7527

7528

ierr = PetscSectionGetFieldDof(subsection, p, f, &fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7528,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7529

ierr = PetscSectionGetFieldConstraintDof(subsection, p, f, &fcdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7529,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7530

pSubSize += fdof-fcdof;

7531

}

7532

subSize += pSubSize;

7533

if (pSubSize) {

7534

if (bs < 0) {

7535

bs = pSubSize;

7536

} else if (bs != pSubSize) {

7537

/* Layout does not admit a pointwise block size */

7538

bs = 1;

7539

}

7540

}

7541

}

7542

}

7543

/* Must have same blocksize on all procs (some might have no points) */

7544

bsLocal[0] = bs < 0 ? PETSC_MAX_INT2147483647 : bs; bsLocal[1] = bs;

7545

ierr = PetscGlobalMinMaxInt(PetscObjectComm((PetscObject) dm), bsLocal, bsMinMax);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7545,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7546

if (bsMinMax[0] != bsMinMax[1]) {bs = 1;}

7547

else {bs = bsMinMax[0];}

7548

ierr = PetscMalloc1(subSize, &subIndices)PetscMallocA(1,PETSC_FALSE,7548,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,(size_t)(subSize)*sizeof(**(&subIndices)),(&subIndices
));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7548,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7549

for (p = pStart; p < pEnd; ++p) {

7550

PetscInt gdof, goff;

7551

7552

ierr = PetscSectionGetDof(subsectionGlobal, p, &gdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7552,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7553

if (gdof > 0) {

7554

const PetscInt point = spmap[p];

7555

7556

ierr = PetscSectionGetOffset(sectionGlobal, point, &goff);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7556,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7557

for (f = 0; f < Nf; ++f) {

7558

PetscInt fdof, fcdof, fc, f2, poff = 0;

7559

7560

/* Can get rid of this loop by storing field information in the global section */

7561

for (f2 = 0; f2 < f; ++f2) {

7562

ierr = PetscSectionGetFieldDof(section, p, f2, &fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7562,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7563

ierr = PetscSectionGetFieldConstraintDof(section, p, f2, &fcdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7563,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7564

poff += fdof-fcdof;

7565

}

7566

ierr = PetscSectionGetFieldDof(section, p, f, &fdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7566,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7567

ierr = PetscSectionGetFieldConstraintDof(section, p, f, &fcdof);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7567,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7568

for (fc = 0; fc < fdof-fcdof; ++fc, ++subOff) {

7569

subIndices[subOff] = goff+poff+fc;

7570

}

7571

}

7572

}

7573

}

7574

ierr = ISRestoreIndices(spIS, &spmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7574,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7575

ierr = ISDestroy(&spIS);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7575,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7576

ierr = ISCreateGeneral(PetscObjectComm((PetscObject)dm), subSize, subIndices, PETSC_OWN_POINTER, is);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7576,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7577

if (bs > 1) {

7578

/* We need to check that the block size does not come from non-contiguous fields */

7579

PetscInt i, j, set = 1;

7580

for (i = 0; i < subSize; i += bs) {

7581

for (j = 0; j < bs; ++j) {

7582

if (subIndices[i+j] != subIndices[i]+j) {set = 0; break;}

7583

}

7584

}

7585

if (set) {ierr = ISSetBlockSize(*is, bs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7585,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);}

7586

}

7587

/* Attach nullspace */

7588

for (f = 0; f < Nf; ++f) {

7589

(*subdm)->nullspaceConstructors[f] = dm->nullspaceConstructors[f];

7590

if ((*subdm)->nullspaceConstructors[f]) break;

7591

}

7592

if (f < Nf) {

7593

MatNullSpace nullSpace;

7594

7595

ierr = (*(*subdm)->nullspaceConstructors[f])(*subdm, f, &nullSpace);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7595,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7596

ierr = PetscObjectCompose((PetscObject) *is, "nullspace", (PetscObject) nullSpace);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7596,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7597

ierr = MatNullSpaceDestroy(&nullSpace);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm
)0x44000001),7597,__func__,"/sandbox/petsc/petsc.master/src/dm/impls/plex/plex.c"
,ierr,PETSC_ERROR_REPEAT," ");} while (0);

7598

}

7599

}

7600

7601

}