File: | mat/impls/baij/mpi/mpibaij.c |
Warning: | line 3914, column 7 Value stored to 'ierr' is never read |
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1 | |
2 | #include <../src/mat/impls/baij/mpi/mpibaij.h> /*I "petscmat.h" I*/ |
3 | |
4 | #include <petscblaslapack.h> |
5 | #include <petscsf.h> |
6 | |
7 | #if defined(PETSC_HAVE_HYPRE) |
8 | PETSC_INTERNextern __attribute__((visibility ("hidden"))) PetscErrorCode MatConvert_AIJ_HYPRE(Mat,MatType,MatReuse,Mat*); |
9 | #endif |
10 | |
11 | PetscErrorCode MatGetRowMaxAbs_MPIBAIJ(Mat A,Vec v,PetscInt idx[]) |
12 | { |
13 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data; |
14 | PetscErrorCode ierr; |
15 | PetscInt i,*idxb = 0; |
16 | PetscScalar *va,*vb; |
17 | Vec vtmp; |
18 | |
19 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 19; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
20 | ierr = MatGetRowMaxAbs(a->A,v,idx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),20,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
21 | ierr = VecGetArray(v,&va);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),21,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
22 | if (idx) { |
23 | for (i=0; i<A->rmap->n; i++) { |
24 | if (PetscAbsScalar(va[i])fabs(va[i])) idx[i] += A->cmap->rstart; |
25 | } |
26 | } |
27 | |
28 | ierr = VecCreateSeq(PETSC_COMM_SELF((MPI_Comm)0x44000001),A->rmap->n,&vtmp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),28,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
29 | if (idx) {ierr = PetscMalloc1(A->rmap->n,&idxb)PetscMallocA(1,PETSC_FALSE,29,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(A->rmap->n)*sizeof(**(&idxb)),(&idxb) );CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),29,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0);} |
30 | ierr = MatGetRowMaxAbs(a->B,vtmp,idxb);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),30,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
31 | ierr = VecGetArray(vtmp,&vb);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),31,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
32 | |
33 | for (i=0; i<A->rmap->n; i++) { |
34 | if (PetscAbsScalar(va[i])fabs(va[i]) < PetscAbsScalar(vb[i])fabs(vb[i])) { |
35 | va[i] = vb[i]; |
36 | if (idx) idx[i] = A->cmap->bs*a->garray[idxb[i]/A->cmap->bs] + (idxb[i] % A->cmap->bs); |
37 | } |
38 | } |
39 | |
40 | ierr = VecRestoreArray(v,&va);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),40,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
41 | ierr = VecRestoreArray(vtmp,&vb);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),41,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
42 | ierr = PetscFree(idxb)((*PetscTrFree)((void*)(idxb),42,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((idxb) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),42,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
43 | ierr = VecDestroy(&vtmp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),43,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
44 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
45 | } |
46 | |
47 | PetscErrorCode MatStoreValues_MPIBAIJ(Mat mat) |
48 | { |
49 | Mat_MPIBAIJ *aij = (Mat_MPIBAIJ*)mat->data; |
50 | PetscErrorCode ierr; |
51 | |
52 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 52; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
53 | ierr = MatStoreValues(aij->A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),53,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
54 | ierr = MatStoreValues(aij->B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),54,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
55 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
56 | } |
57 | |
58 | PetscErrorCode MatRetrieveValues_MPIBAIJ(Mat mat) |
59 | { |
60 | Mat_MPIBAIJ *aij = (Mat_MPIBAIJ*)mat->data; |
61 | PetscErrorCode ierr; |
62 | |
63 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 63; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
64 | ierr = MatRetrieveValues(aij->A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),64,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
65 | ierr = MatRetrieveValues(aij->B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),65,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
66 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
67 | } |
68 | |
69 | /* |
70 | Local utility routine that creates a mapping from the global column |
71 | number to the local number in the off-diagonal part of the local |
72 | storage of the matrix. This is done in a non scalable way since the |
73 | length of colmap equals the global matrix length. |
74 | */ |
75 | PetscErrorCode MatCreateColmap_MPIBAIJ_Private(Mat mat) |
76 | { |
77 | Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data; |
78 | Mat_SeqBAIJ *B = (Mat_SeqBAIJ*)baij->B->data; |
79 | PetscErrorCode ierr; |
80 | PetscInt nbs = B->nbs,i,bs=mat->rmap->bs; |
81 | |
82 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 82; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
83 | #if defined(PETSC_USE_CTABLE1) |
84 | ierr = PetscTableCreate(baij->nbs,baij->Nbs+1,&baij->colmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),84,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
85 | for (i=0; i<nbs; i++) { |
86 | ierr = PetscTableAdd(baij->colmap,baij->garray[i]+1,i*bs+1,INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),86,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
87 | } |
88 | #else |
89 | ierr = PetscCalloc1(baij->Nbs+1,&baij->colmap)PetscMallocA(1,PETSC_TRUE,89,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(baij->Nbs+1)*sizeof(**(&baij->colmap)),(& baij->colmap));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),89,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
90 | ierr = PetscLogObjectMemory((PetscObject)mat,baij->Nbs*sizeof(PetscInt));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),90,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
91 | for (i=0; i<nbs; i++) baij->colmap[baij->garray[i]] = i*bs+1; |
92 | #endif |
93 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
94 | } |
95 | |
96 | #define MatSetValues_SeqBAIJ_A_Private(row,col,value,addv,orow,ocol){ brow = row/bs; rp = aj + ai[brow]; ap = aa + bs2*ai[brow]; rmax = aimax[brow]; nrow = ailen[brow]; bcol = col/bs; ridx = row % bs; cidx = col % bs; low = 0; high = nrow; while (high-low > 3) { t = (low+high)/2; if (rp[t] > bcol) high = t; else low = t; } for (_i=low; _i<high; _i++) { if (rp[_i] > bcol ) break; if (rp[_i] == bcol) { bap = ap + bs2*_i + bs*cidx + ridx ; if (addv == ADD_VALUES) *bap += value; else *bap = value; goto a_noinsert; } } if (a->nonew == 1) goto a_noinsert; if (a ->nonew == -1) return PetscError(((MPI_Comm)0x44000001),96 ,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Inserting a new nonzero at global row/column (%D, %D) into matrix" ,orow,ocol); if (nrow >= rmax) { Mat_SeqAIJ *Ain = (Mat_SeqAIJ *)A->data; PetscInt CHUNKSIZE = 15,new_nz = ai[a->mbs] + CHUNKSIZE,len,*new_i=0,*new_j=0; MatScalar *new_a; if (a-> nonew == -2) return PetscError(((MPI_Comm)0x44000001),96,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"New nonzero at (%D,%D) caused a malloc\nUse MatSetOption(A, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE) to turn off this check" ,brow,bcol); ierr = PetscMallocA(3,PETSC_FALSE,96,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(bs2*new_nz)*sizeof(**(&new_a)),(&new_a),(size_t )(new_nz)*sizeof(**(&new_j)),(&new_j),(size_t)(a-> mbs+1)*sizeof(**(&new_i)),(&new_i));do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),96,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); for (ii=0; ii<brow +1; ii++) {new_i[ii] = ai[ii];} for (ii=brow+1; ii<a->mbs +1; ii++) {new_i[ii] = ai[ii]+CHUNKSIZE;} ierr = ((sizeof(*(new_j )) != sizeof(*(aj))) || PetscMemcpy(new_j,aj,(ai[brow]+nrow)* sizeof(*(new_j))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),96,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); len = (new_nz - CHUNKSIZE - ai[brow] - nrow); ierr = ((sizeof(*(new_j+ai[brow]+nrow+CHUNKSIZE )) != sizeof(*(aj+ai[brow]+nrow))) || PetscMemcpy(new_j+ai[brow ]+nrow+CHUNKSIZE,aj+ai[brow]+nrow,(len)*sizeof(*(new_j+ai[brow ]+nrow+CHUNKSIZE))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),96,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( new_a)) != sizeof(*(aa))) || PetscMemcpy(new_a,aa,(bs2*(ai[brow ]+nrow))*sizeof(*(new_a))));do {if (__builtin_expect(!!(ierr) ,0)) return PetscError(((MPI_Comm)0x44000001),96,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = PetscMemzero (new_a+bs2*(ai[brow]+nrow),(bs2*CHUNKSIZE)*sizeof(*(new_a+bs2 *(ai[brow]+nrow))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),96,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( new_a+bs2*(ai[brow]+nrow+CHUNKSIZE))) != sizeof(*(aa+bs2*(ai[ brow]+nrow)))) || PetscMemcpy(new_a+bs2*(ai[brow]+nrow+CHUNKSIZE ),aa+bs2*(ai[brow]+nrow),(bs2*len)*sizeof(*(new_a+bs2*(ai[brow ]+nrow+CHUNKSIZE)))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),96,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = MatSeqXAIJFreeAIJ (A,&Ain->a,&Ain->j,&Ain->i);do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),96,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); aa = new_a; Ain-> a = (MatScalar*) new_a; ai = Ain->i = new_i; aj = Ain-> j = new_j; Ain->singlemalloc = PETSC_TRUE; rp = aj + ai[brow ]; ap = aa + bs2*ai[brow]; rmax = aimax[brow] = aimax[brow] + CHUNKSIZE; Ain->maxnz += bs2*CHUNKSIZE; Ain->reallocs++ ; }; N = nrow++ - 1; ierr = ((sizeof(*(rp+_i+1)) != sizeof(*( rp+_i))) || PetscMemmove(rp+_i+1,rp+_i,(N-_i+1)*sizeof(*(rp+_i +1))));do {if (__builtin_expect(!!(ierr),0)) return PetscError (((MPI_Comm)0x44000001),96,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( ap+bs2*(_i+1))) != sizeof(*(ap+bs2*_i))) || PetscMemmove(ap+bs2 *(_i+1),ap+bs2*_i,(bs2*(N-_i+1))*sizeof(*(ap+bs2*(_i+1)))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),96,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = PetscMemzero (ap+bs2*_i,(bs2)*sizeof(*(ap+bs2*_i)));do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),96,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); rp[_i] = bcol; ap[ bs2*_i + bs*cidx + ridx] = value; a_noinsert:; ailen[brow] = nrow ; } \ |
97 | { \ |
98 | brow = row/bs; \ |
99 | rp = aj + ai[brow]; ap = aa + bs2*ai[brow]; \ |
100 | rmax = aimax[brow]; nrow = ailen[brow]; \ |
101 | bcol = col/bs; \ |
102 | ridx = row % bs; cidx = col % bs; \ |
103 | low = 0; high = nrow; \ |
104 | while (high-low > 3) { \ |
105 | t = (low+high)/2; \ |
106 | if (rp[t] > bcol) high = t; \ |
107 | else low = t; \ |
108 | } \ |
109 | for (_i=low; _i<high; _i++) { \ |
110 | if (rp[_i] > bcol) break; \ |
111 | if (rp[_i] == bcol) { \ |
112 | bap = ap + bs2*_i + bs*cidx + ridx; \ |
113 | if (addv == ADD_VALUES) *bap += value; \ |
114 | else *bap = value; \ |
115 | goto a_noinsert; \ |
116 | } \ |
117 | } \ |
118 | if (a->nonew == 1) goto a_noinsert; \ |
119 | if (a->nonew == -1) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero at global row/column (%D, %D) into matrix", orow, ocol)return PetscError(((MPI_Comm)0x44000001),119,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Inserting a new nonzero at global row/column (%D, %D) into matrix" ,orow,ocol); \ |
120 | MatSeqXAIJReallocateAIJ(A,a->mbs,bs2,nrow,brow,bcol,rmax,aa,ai,aj,rp,ap,aimax,a->nonew,MatScalar)if (nrow >= rmax) { Mat_SeqAIJ *Ain = (Mat_SeqAIJ*)A->data ; PetscInt CHUNKSIZE = 15,new_nz = ai[a->mbs] + CHUNKSIZE, len,*new_i=0,*new_j=0; MatScalar *new_a; if (a->nonew == - 2) return PetscError(((MPI_Comm)0x44000001),120,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"New nonzero at (%D,%D) caused a malloc\nUse MatSetOption(A, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE) to turn off this check" ,brow,bcol); ierr = PetscMallocA(3,PETSC_FALSE,120,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(bs2*new_nz)*sizeof(**(&new_a)),(&new_a),(size_t )(new_nz)*sizeof(**(&new_j)),(&new_j),(size_t)(a-> mbs+1)*sizeof(**(&new_i)),(&new_i));do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),120,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); for (ii=0; ii<brow +1; ii++) {new_i[ii] = ai[ii];} for (ii=brow+1; ii<a->mbs +1; ii++) {new_i[ii] = ai[ii]+CHUNKSIZE;} ierr = ((sizeof(*(new_j )) != sizeof(*(aj))) || PetscMemcpy(new_j,aj,(ai[brow]+nrow)* sizeof(*(new_j))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),120,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); len = (new_nz - CHUNKSIZE - ai[brow] - nrow); ierr = ((sizeof(*(new_j+ai[brow]+nrow+CHUNKSIZE )) != sizeof(*(aj+ai[brow]+nrow))) || PetscMemcpy(new_j+ai[brow ]+nrow+CHUNKSIZE,aj+ai[brow]+nrow,(len)*sizeof(*(new_j+ai[brow ]+nrow+CHUNKSIZE))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),120,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( new_a)) != sizeof(*(aa))) || PetscMemcpy(new_a,aa,(bs2*(ai[brow ]+nrow))*sizeof(*(new_a))));do {if (__builtin_expect(!!(ierr) ,0)) return PetscError(((MPI_Comm)0x44000001),120,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = PetscMemzero (new_a+bs2*(ai[brow]+nrow),(bs2*CHUNKSIZE)*sizeof(*(new_a+bs2 *(ai[brow]+nrow))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),120,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( new_a+bs2*(ai[brow]+nrow+CHUNKSIZE))) != sizeof(*(aa+bs2*(ai[ brow]+nrow)))) || PetscMemcpy(new_a+bs2*(ai[brow]+nrow+CHUNKSIZE ),aa+bs2*(ai[brow]+nrow),(bs2*len)*sizeof(*(new_a+bs2*(ai[brow ]+nrow+CHUNKSIZE)))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),120,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = MatSeqXAIJFreeAIJ (A,&Ain->a,&Ain->j,&Ain->i);do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),120,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); aa = new_a; Ain-> a = (MatScalar*) new_a; ai = Ain->i = new_i; aj = Ain-> j = new_j; Ain->singlemalloc = PETSC_TRUE; rp = aj + ai[brow ]; ap = aa + bs2*ai[brow]; rmax = aimax[brow] = aimax[brow] + CHUNKSIZE; Ain->maxnz += bs2*CHUNKSIZE; Ain->reallocs++ ; }; \ |
121 | N = nrow++ - 1; \ |
122 | /* shift up all the later entries in this row */ \ |
123 | ierr = PetscArraymove(rp+_i+1,rp+_i,N-_i+1)((sizeof(*(rp+_i+1)) != sizeof(*(rp+_i))) || PetscMemmove(rp+ _i+1,rp+_i,(N-_i+1)*sizeof(*(rp+_i+1))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),123,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0);\ |
124 | ierr = PetscArraymove(ap+bs2*(_i+1),ap+bs2*_i,bs2*(N-_i+1))((sizeof(*(ap+bs2*(_i+1))) != sizeof(*(ap+bs2*_i))) || PetscMemmove (ap+bs2*(_i+1),ap+bs2*_i,(bs2*(N-_i+1))*sizeof(*(ap+bs2*(_i+1 )))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),124,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); \ |
125 | ierr = PetscArrayzero(ap+bs2*_i,bs2)PetscMemzero(ap+bs2*_i,(bs2)*sizeof(*(ap+bs2*_i)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),125,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); \ |
126 | rp[_i] = bcol; \ |
127 | ap[bs2*_i + bs*cidx + ridx] = value; \ |
128 | a_noinsert:; \ |
129 | ailen[brow] = nrow; \ |
130 | } |
131 | |
132 | #define MatSetValues_SeqBAIJ_B_Private(row,col,value,addv,orow,ocol){ brow = row/bs; rp = bj + bi[brow]; ap = ba + bs2*bi[brow]; rmax = bimax[brow]; nrow = bilen[brow]; bcol = col/bs; ridx = row % bs; cidx = col % bs; low = 0; high = nrow; while (high-low > 3) { t = (low+high)/2; if (rp[t] > bcol) high = t; else low = t; } for (_i=low; _i<high; _i++) { if (rp[_i] > bcol ) break; if (rp[_i] == bcol) { bap = ap + bs2*_i + bs*cidx + ridx ; if (addv == ADD_VALUES) *bap += value; else *bap = value; goto b_noinsert; } } if (b->nonew == 1) goto b_noinsert; if (b ->nonew == -1) return PetscError(((MPI_Comm)0x44000001),132 ,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Inserting a new nonzero at global row/column (%D, %D) into matrix" ,orow,ocol); if (nrow >= rmax) { Mat_SeqAIJ *Ain = (Mat_SeqAIJ *)B->data; PetscInt CHUNKSIZE = 15,new_nz = bi[b->mbs] + CHUNKSIZE,len,*new_i=0,*new_j=0; MatScalar *new_a; if (b-> nonew == -2) return PetscError(((MPI_Comm)0x44000001),132,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"New nonzero at (%D,%D) caused a malloc\nUse MatSetOption(A, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE) to turn off this check" ,brow,bcol); ierr = PetscMallocA(3,PETSC_FALSE,132,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(bs2*new_nz)*sizeof(**(&new_a)),(&new_a),(size_t )(new_nz)*sizeof(**(&new_j)),(&new_j),(size_t)(b-> mbs+1)*sizeof(**(&new_i)),(&new_i));do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),132,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); for (ii=0; ii<brow +1; ii++) {new_i[ii] = bi[ii];} for (ii=brow+1; ii<b->mbs +1; ii++) {new_i[ii] = bi[ii]+CHUNKSIZE;} ierr = ((sizeof(*(new_j )) != sizeof(*(bj))) || PetscMemcpy(new_j,bj,(bi[brow]+nrow)* sizeof(*(new_j))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),132,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); len = (new_nz - CHUNKSIZE - bi[brow] - nrow); ierr = ((sizeof(*(new_j+bi[brow]+nrow+CHUNKSIZE )) != sizeof(*(bj+bi[brow]+nrow))) || PetscMemcpy(new_j+bi[brow ]+nrow+CHUNKSIZE,bj+bi[brow]+nrow,(len)*sizeof(*(new_j+bi[brow ]+nrow+CHUNKSIZE))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),132,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( new_a)) != sizeof(*(ba))) || PetscMemcpy(new_a,ba,(bs2*(bi[brow ]+nrow))*sizeof(*(new_a))));do {if (__builtin_expect(!!(ierr) ,0)) return PetscError(((MPI_Comm)0x44000001),132,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = PetscMemzero (new_a+bs2*(bi[brow]+nrow),(bs2*CHUNKSIZE)*sizeof(*(new_a+bs2 *(bi[brow]+nrow))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),132,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( new_a+bs2*(bi[brow]+nrow+CHUNKSIZE))) != sizeof(*(ba+bs2*(bi[ brow]+nrow)))) || PetscMemcpy(new_a+bs2*(bi[brow]+nrow+CHUNKSIZE ),ba+bs2*(bi[brow]+nrow),(bs2*len)*sizeof(*(new_a+bs2*(bi[brow ]+nrow+CHUNKSIZE)))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),132,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = MatSeqXAIJFreeAIJ (A,&Ain->a,&Ain->j,&Ain->i);do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),132,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ba = new_a; Ain-> a = (MatScalar*) new_a; bi = Ain->i = new_i; bj = Ain-> j = new_j; Ain->singlemalloc = PETSC_TRUE; rp = bj + bi[brow ]; ap = ba + bs2*bi[brow]; rmax = bimax[brow] = bimax[brow] + CHUNKSIZE; Ain->maxnz += bs2*CHUNKSIZE; Ain->reallocs++ ; }; N = nrow++ - 1; ierr = ((sizeof(*(rp+_i+1)) != sizeof(*( rp+_i))) || PetscMemmove(rp+_i+1,rp+_i,(N-_i+1)*sizeof(*(rp+_i +1))));do {if (__builtin_expect(!!(ierr),0)) return PetscError (((MPI_Comm)0x44000001),132,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( ap+bs2*(_i+1))) != sizeof(*(ap+bs2*_i))) || PetscMemmove(ap+bs2 *(_i+1),ap+bs2*_i,(bs2*(N-_i+1))*sizeof(*(ap+bs2*(_i+1)))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),132,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = PetscMemzero (ap+bs2*_i,(bs2)*sizeof(*(ap+bs2*_i)));do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),132,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); rp[_i] = bcol; ap[ bs2*_i + bs*cidx + ridx] = value; b_noinsert:; bilen[brow] = nrow ; } \ |
133 | { \ |
134 | brow = row/bs; \ |
135 | rp = bj + bi[brow]; ap = ba + bs2*bi[brow]; \ |
136 | rmax = bimax[brow]; nrow = bilen[brow]; \ |
137 | bcol = col/bs; \ |
138 | ridx = row % bs; cidx = col % bs; \ |
139 | low = 0; high = nrow; \ |
140 | while (high-low > 3) { \ |
141 | t = (low+high)/2; \ |
142 | if (rp[t] > bcol) high = t; \ |
143 | else low = t; \ |
144 | } \ |
145 | for (_i=low; _i<high; _i++) { \ |
146 | if (rp[_i] > bcol) break; \ |
147 | if (rp[_i] == bcol) { \ |
148 | bap = ap + bs2*_i + bs*cidx + ridx; \ |
149 | if (addv == ADD_VALUES) *bap += value; \ |
150 | else *bap = value; \ |
151 | goto b_noinsert; \ |
152 | } \ |
153 | } \ |
154 | if (b->nonew == 1) goto b_noinsert; \ |
155 | if (b->nonew == -1) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero at global row/column (%D, %D) into matrix", orow, ocol)return PetscError(((MPI_Comm)0x44000001),155,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Inserting a new nonzero at global row/column (%D, %D) into matrix" ,orow,ocol); \ |
156 | MatSeqXAIJReallocateAIJ(B,b->mbs,bs2,nrow,brow,bcol,rmax,ba,bi,bj,rp,ap,bimax,b->nonew,MatScalar)if (nrow >= rmax) { Mat_SeqAIJ *Ain = (Mat_SeqAIJ*)B->data ; PetscInt CHUNKSIZE = 15,new_nz = bi[b->mbs] + CHUNKSIZE, len,*new_i=0,*new_j=0; MatScalar *new_a; if (b->nonew == - 2) return PetscError(((MPI_Comm)0x44000001),156,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"New nonzero at (%D,%D) caused a malloc\nUse MatSetOption(A, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE) to turn off this check" ,brow,bcol); ierr = PetscMallocA(3,PETSC_FALSE,156,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(bs2*new_nz)*sizeof(**(&new_a)),(&new_a),(size_t )(new_nz)*sizeof(**(&new_j)),(&new_j),(size_t)(b-> mbs+1)*sizeof(**(&new_i)),(&new_i));do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),156,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); for (ii=0; ii<brow +1; ii++) {new_i[ii] = bi[ii];} for (ii=brow+1; ii<b->mbs +1; ii++) {new_i[ii] = bi[ii]+CHUNKSIZE;} ierr = ((sizeof(*(new_j )) != sizeof(*(bj))) || PetscMemcpy(new_j,bj,(bi[brow]+nrow)* sizeof(*(new_j))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),156,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); len = (new_nz - CHUNKSIZE - bi[brow] - nrow); ierr = ((sizeof(*(new_j+bi[brow]+nrow+CHUNKSIZE )) != sizeof(*(bj+bi[brow]+nrow))) || PetscMemcpy(new_j+bi[brow ]+nrow+CHUNKSIZE,bj+bi[brow]+nrow,(len)*sizeof(*(new_j+bi[brow ]+nrow+CHUNKSIZE))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),156,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( new_a)) != sizeof(*(ba))) || PetscMemcpy(new_a,ba,(bs2*(bi[brow ]+nrow))*sizeof(*(new_a))));do {if (__builtin_expect(!!(ierr) ,0)) return PetscError(((MPI_Comm)0x44000001),156,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = PetscMemzero (new_a+bs2*(bi[brow]+nrow),(bs2*CHUNKSIZE)*sizeof(*(new_a+bs2 *(bi[brow]+nrow))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),156,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( new_a+bs2*(bi[brow]+nrow+CHUNKSIZE))) != sizeof(*(ba+bs2*(bi[ brow]+nrow)))) || PetscMemcpy(new_a+bs2*(bi[brow]+nrow+CHUNKSIZE ),ba+bs2*(bi[brow]+nrow),(bs2*len)*sizeof(*(new_a+bs2*(bi[brow ]+nrow+CHUNKSIZE)))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),156,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = MatSeqXAIJFreeAIJ (A,&Ain->a,&Ain->j,&Ain->i);do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),156,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ba = new_a; Ain-> a = (MatScalar*) new_a; bi = Ain->i = new_i; bj = Ain-> j = new_j; Ain->singlemalloc = PETSC_TRUE; rp = bj + bi[brow ]; ap = ba + bs2*bi[brow]; rmax = bimax[brow] = bimax[brow] + CHUNKSIZE; Ain->maxnz += bs2*CHUNKSIZE; Ain->reallocs++ ; }; \ |
157 | N = nrow++ - 1; \ |
158 | /* shift up all the later entries in this row */ \ |
159 | ierr = PetscArraymove(rp+_i+1,rp+_i,N-_i+1)((sizeof(*(rp+_i+1)) != sizeof(*(rp+_i))) || PetscMemmove(rp+ _i+1,rp+_i,(N-_i+1)*sizeof(*(rp+_i+1))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),159,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0);\ |
160 | ierr = PetscArraymove(ap+bs2*(_i+1),ap+bs2*_i,bs2*(N-_i+1))((sizeof(*(ap+bs2*(_i+1))) != sizeof(*(ap+bs2*_i))) || PetscMemmove (ap+bs2*(_i+1),ap+bs2*_i,(bs2*(N-_i+1))*sizeof(*(ap+bs2*(_i+1 )))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),160,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0);\ |
161 | ierr = PetscArrayzero(ap+bs2*_i,bs2)PetscMemzero(ap+bs2*_i,(bs2)*sizeof(*(ap+bs2*_i)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),161,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); \ |
162 | rp[_i] = bcol; \ |
163 | ap[bs2*_i + bs*cidx + ridx] = value; \ |
164 | b_noinsert:; \ |
165 | bilen[brow] = nrow; \ |
166 | } |
167 | |
168 | PetscErrorCode MatSetValues_MPIBAIJ(Mat mat,PetscInt m,const PetscInt im[],PetscInt n,const PetscInt in[],const PetscScalar v[],InsertMode addv) |
169 | { |
170 | Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data; |
171 | MatScalar value; |
172 | PetscBool roworiented = baij->roworiented; |
173 | PetscErrorCode ierr; |
174 | PetscInt i,j,row,col; |
175 | PetscInt rstart_orig=mat->rmap->rstart; |
176 | PetscInt rend_orig =mat->rmap->rend,cstart_orig=mat->cmap->rstart; |
177 | PetscInt cend_orig =mat->cmap->rend,bs=mat->rmap->bs; |
178 | |
179 | /* Some Variables required in the macro */ |
180 | Mat A = baij->A; |
181 | Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)(A)->data; |
182 | PetscInt *aimax=a->imax,*ai=a->i,*ailen=a->ilen,*aj=a->j; |
183 | MatScalar *aa =a->a; |
184 | |
185 | Mat B = baij->B; |
186 | Mat_SeqBAIJ *b = (Mat_SeqBAIJ*)(B)->data; |
187 | PetscInt *bimax=b->imax,*bi=b->i,*bilen=b->ilen,*bj=b->j; |
188 | MatScalar *ba =b->a; |
189 | |
190 | PetscInt *rp,ii,nrow,_i,rmax,N,brow,bcol; |
191 | PetscInt low,high,t,ridx,cidx,bs2=a->bs2; |
192 | MatScalar *ap,*bap; |
193 | |
194 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 194; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
195 | for (i=0; i<m; i++) { |
196 | if (im[i] < 0) continue; |
197 | #if defined(PETSC_USE_DEBUG1) |
198 | if (im[i] >= mat->rmap->N) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large: row %D max %D",im[i],mat->rmap->N-1)return PetscError(((MPI_Comm)0x44000001),198,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Row too large: row %D max %D",im[i], mat->rmap->N-1); |
199 | #endif |
200 | if (im[i] >= rstart_orig && im[i] < rend_orig) { |
201 | row = im[i] - rstart_orig; |
202 | for (j=0; j<n; j++) { |
203 | if (in[j] >= cstart_orig && in[j] < cend_orig) { |
204 | col = in[j] - cstart_orig; |
205 | if (roworiented) value = v[i*n+j]; |
206 | else value = v[i+j*m]; |
207 | MatSetValues_SeqBAIJ_A_Private(row,col,value,addv,im[i],in[j]){ brow = row/bs; rp = aj + ai[brow]; ap = aa + bs2*ai[brow]; rmax = aimax[brow]; nrow = ailen[brow]; bcol = col/bs; ridx = row % bs; cidx = col % bs; low = 0; high = nrow; while (high-low > 3) { t = (low+high)/2; if (rp[t] > bcol) high = t; else low = t; } for (_i=low; _i<high; _i++) { if (rp[_i] > bcol ) break; if (rp[_i] == bcol) { bap = ap + bs2*_i + bs*cidx + ridx ; if (addv == ADD_VALUES) *bap += value; else *bap = value; goto a_noinsert; } } if (a->nonew == 1) goto a_noinsert; if (a ->nonew == -1) return PetscError(((MPI_Comm)0x44000001),207 ,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Inserting a new nonzero at global row/column (%D, %D) into matrix" ,im[i],in[j]); if (nrow >= rmax) { Mat_SeqAIJ *Ain = (Mat_SeqAIJ *)A->data; PetscInt CHUNKSIZE = 15,new_nz = ai[a->mbs] + CHUNKSIZE,len,*new_i=0,*new_j=0; MatScalar *new_a; if (a-> nonew == -2) return PetscError(((MPI_Comm)0x44000001),207,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"New nonzero at (%D,%D) caused a malloc\nUse MatSetOption(A, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE) to turn off this check" ,brow,bcol); ierr = PetscMallocA(3,PETSC_FALSE,207,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(bs2*new_nz)*sizeof(**(&new_a)),(&new_a),(size_t )(new_nz)*sizeof(**(&new_j)),(&new_j),(size_t)(a-> mbs+1)*sizeof(**(&new_i)),(&new_i));do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),207,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); for (ii=0; ii<brow +1; ii++) {new_i[ii] = ai[ii];} for (ii=brow+1; ii<a->mbs +1; ii++) {new_i[ii] = ai[ii]+CHUNKSIZE;} ierr = ((sizeof(*(new_j )) != sizeof(*(aj))) || PetscMemcpy(new_j,aj,(ai[brow]+nrow)* sizeof(*(new_j))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),207,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); len = (new_nz - CHUNKSIZE - ai[brow] - nrow); ierr = ((sizeof(*(new_j+ai[brow]+nrow+CHUNKSIZE )) != sizeof(*(aj+ai[brow]+nrow))) || PetscMemcpy(new_j+ai[brow ]+nrow+CHUNKSIZE,aj+ai[brow]+nrow,(len)*sizeof(*(new_j+ai[brow ]+nrow+CHUNKSIZE))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),207,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( new_a)) != sizeof(*(aa))) || PetscMemcpy(new_a,aa,(bs2*(ai[brow ]+nrow))*sizeof(*(new_a))));do {if (__builtin_expect(!!(ierr) ,0)) return PetscError(((MPI_Comm)0x44000001),207,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = PetscMemzero (new_a+bs2*(ai[brow]+nrow),(bs2*CHUNKSIZE)*sizeof(*(new_a+bs2 *(ai[brow]+nrow))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),207,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( new_a+bs2*(ai[brow]+nrow+CHUNKSIZE))) != sizeof(*(aa+bs2*(ai[ brow]+nrow)))) || PetscMemcpy(new_a+bs2*(ai[brow]+nrow+CHUNKSIZE ),aa+bs2*(ai[brow]+nrow),(bs2*len)*sizeof(*(new_a+bs2*(ai[brow ]+nrow+CHUNKSIZE)))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),207,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = MatSeqXAIJFreeAIJ (A,&Ain->a,&Ain->j,&Ain->i);do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),207,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); aa = new_a; Ain-> a = (MatScalar*) new_a; ai = Ain->i = new_i; aj = Ain-> j = new_j; Ain->singlemalloc = PETSC_TRUE; rp = aj + ai[brow ]; ap = aa + bs2*ai[brow]; rmax = aimax[brow] = aimax[brow] + CHUNKSIZE; Ain->maxnz += bs2*CHUNKSIZE; Ain->reallocs++ ; }; N = nrow++ - 1; ierr = ((sizeof(*(rp+_i+1)) != sizeof(*( rp+_i))) || PetscMemmove(rp+_i+1,rp+_i,(N-_i+1)*sizeof(*(rp+_i +1))));do {if (__builtin_expect(!!(ierr),0)) return PetscError (((MPI_Comm)0x44000001),207,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( ap+bs2*(_i+1))) != sizeof(*(ap+bs2*_i))) || PetscMemmove(ap+bs2 *(_i+1),ap+bs2*_i,(bs2*(N-_i+1))*sizeof(*(ap+bs2*(_i+1)))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),207,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = PetscMemzero (ap+bs2*_i,(bs2)*sizeof(*(ap+bs2*_i)));do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),207,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); rp[_i] = bcol; ap[ bs2*_i + bs*cidx + ridx] = value; a_noinsert:; ailen[brow] = nrow ; }; |
208 | } else if (in[j] < 0) continue; |
209 | #if defined(PETSC_USE_DEBUG1) |
210 | else if (in[j] >= mat->cmap->N) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large: col %D max %D",in[j],mat->cmap->N-1)return PetscError(((MPI_Comm)0x44000001),210,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Column too large: col %D max %D",in[ j],mat->cmap->N-1); |
211 | #endif |
212 | else { |
213 | if (mat->was_assembled) { |
214 | if (!baij->colmap) { |
215 | ierr = MatCreateColmap_MPIBAIJ_Private(mat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),215,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
216 | } |
217 | #if defined(PETSC_USE_CTABLE1) |
218 | ierr = PetscTableFind(baij->colmap,in[j]/bs + 1,&col);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),218,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
219 | col = col - 1; |
220 | #else |
221 | col = baij->colmap[in[j]/bs] - 1; |
222 | #endif |
223 | if (col < 0 && !((Mat_SeqBAIJ*)(baij->B->data))->nonew) { |
224 | ierr = MatDisAssemble_MPIBAIJ(mat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),224,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
225 | col = in[j]; |
226 | /* Reinitialize the variables required by MatSetValues_SeqBAIJ_B_Private() */ |
227 | B = baij->B; |
228 | b = (Mat_SeqBAIJ*)(B)->data; |
229 | bimax=b->imax;bi=b->i;bilen=b->ilen;bj=b->j; |
230 | ba =b->a; |
231 | } else if (col < 0) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero (%D, %D) into matrix", im[i], in[j])return PetscError(((MPI_Comm)0x44000001),231,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Inserting a new nonzero (%D, %D) into matrix" ,im[i],in[j]); |
232 | else col += in[j]%bs; |
233 | } else col = in[j]; |
234 | if (roworiented) value = v[i*n+j]; |
235 | else value = v[i+j*m]; |
236 | MatSetValues_SeqBAIJ_B_Private(row,col,value,addv,im[i],in[j]){ brow = row/bs; rp = bj + bi[brow]; ap = ba + bs2*bi[brow]; rmax = bimax[brow]; nrow = bilen[brow]; bcol = col/bs; ridx = row % bs; cidx = col % bs; low = 0; high = nrow; while (high-low > 3) { t = (low+high)/2; if (rp[t] > bcol) high = t; else low = t; } for (_i=low; _i<high; _i++) { if (rp[_i] > bcol ) break; if (rp[_i] == bcol) { bap = ap + bs2*_i + bs*cidx + ridx ; if (addv == ADD_VALUES) *bap += value; else *bap = value; goto b_noinsert; } } if (b->nonew == 1) goto b_noinsert; if (b ->nonew == -1) return PetscError(((MPI_Comm)0x44000001),236 ,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Inserting a new nonzero at global row/column (%D, %D) into matrix" ,im[i],in[j]); if (nrow >= rmax) { Mat_SeqAIJ *Ain = (Mat_SeqAIJ *)B->data; PetscInt CHUNKSIZE = 15,new_nz = bi[b->mbs] + CHUNKSIZE,len,*new_i=0,*new_j=0; MatScalar *new_a; if (b-> nonew == -2) return PetscError(((MPI_Comm)0x44000001),236,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"New nonzero at (%D,%D) caused a malloc\nUse MatSetOption(A, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE) to turn off this check" ,brow,bcol); ierr = PetscMallocA(3,PETSC_FALSE,236,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(bs2*new_nz)*sizeof(**(&new_a)),(&new_a),(size_t )(new_nz)*sizeof(**(&new_j)),(&new_j),(size_t)(b-> mbs+1)*sizeof(**(&new_i)),(&new_i));do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),236,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); for (ii=0; ii<brow +1; ii++) {new_i[ii] = bi[ii];} for (ii=brow+1; ii<b->mbs +1; ii++) {new_i[ii] = bi[ii]+CHUNKSIZE;} ierr = ((sizeof(*(new_j )) != sizeof(*(bj))) || PetscMemcpy(new_j,bj,(bi[brow]+nrow)* sizeof(*(new_j))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),236,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); len = (new_nz - CHUNKSIZE - bi[brow] - nrow); ierr = ((sizeof(*(new_j+bi[brow]+nrow+CHUNKSIZE )) != sizeof(*(bj+bi[brow]+nrow))) || PetscMemcpy(new_j+bi[brow ]+nrow+CHUNKSIZE,bj+bi[brow]+nrow,(len)*sizeof(*(new_j+bi[brow ]+nrow+CHUNKSIZE))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),236,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( new_a)) != sizeof(*(ba))) || PetscMemcpy(new_a,ba,(bs2*(bi[brow ]+nrow))*sizeof(*(new_a))));do {if (__builtin_expect(!!(ierr) ,0)) return PetscError(((MPI_Comm)0x44000001),236,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = PetscMemzero (new_a+bs2*(bi[brow]+nrow),(bs2*CHUNKSIZE)*sizeof(*(new_a+bs2 *(bi[brow]+nrow))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),236,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( new_a+bs2*(bi[brow]+nrow+CHUNKSIZE))) != sizeof(*(ba+bs2*(bi[ brow]+nrow)))) || PetscMemcpy(new_a+bs2*(bi[brow]+nrow+CHUNKSIZE ),ba+bs2*(bi[brow]+nrow),(bs2*len)*sizeof(*(new_a+bs2*(bi[brow ]+nrow+CHUNKSIZE)))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),236,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = MatSeqXAIJFreeAIJ (A,&Ain->a,&Ain->j,&Ain->i);do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),236,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ba = new_a; Ain-> a = (MatScalar*) new_a; bi = Ain->i = new_i; bj = Ain-> j = new_j; Ain->singlemalloc = PETSC_TRUE; rp = bj + bi[brow ]; ap = ba + bs2*bi[brow]; rmax = bimax[brow] = bimax[brow] + CHUNKSIZE; Ain->maxnz += bs2*CHUNKSIZE; Ain->reallocs++ ; }; N = nrow++ - 1; ierr = ((sizeof(*(rp+_i+1)) != sizeof(*( rp+_i))) || PetscMemmove(rp+_i+1,rp+_i,(N-_i+1)*sizeof(*(rp+_i +1))));do {if (__builtin_expect(!!(ierr),0)) return PetscError (((MPI_Comm)0x44000001),236,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( ap+bs2*(_i+1))) != sizeof(*(ap+bs2*_i))) || PetscMemmove(ap+bs2 *(_i+1),ap+bs2*_i,(bs2*(N-_i+1))*sizeof(*(ap+bs2*(_i+1)))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),236,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = PetscMemzero (ap+bs2*_i,(bs2)*sizeof(*(ap+bs2*_i)));do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),236,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); rp[_i] = bcol; ap[ bs2*_i + bs*cidx + ridx] = value; b_noinsert:; bilen[brow] = nrow ; }; |
237 | /* ierr = MatSetValues_SeqBAIJ(baij->B,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */ |
238 | } |
239 | } |
240 | } else { |
241 | if (mat->nooffprocentries) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Setting off process row %D even though MatSetOption(,MAT_NO_OFF_PROC_ENTRIES,PETSC_TRUE) was set",im[i])return PetscError(((MPI_Comm)0x44000001),241,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,62,PETSC_ERROR_INITIAL,"Setting off process row %D even though MatSetOption(,MAT_NO_OFF_PROC_ENTRIES,PETSC_TRUE) was set" ,im[i]); |
242 | if (!baij->donotstash) { |
243 | mat->assembled = PETSC_FALSE; |
244 | if (roworiented) { |
245 | ierr = MatStashValuesRow_Private(&mat->stash,im[i],n,in,v+i*n,PETSC_FALSE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),245,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
246 | } else { |
247 | ierr = MatStashValuesCol_Private(&mat->stash,im[i],n,in,v+i,m,PETSC_FALSE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),247,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
248 | } |
249 | } |
250 | } |
251 | } |
252 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
253 | } |
254 | |
255 | PETSC_STATIC_INLINEstatic inline PetscErrorCode MatSetValuesBlocked_SeqBAIJ_Inlined(Mat A,PetscInt row,PetscInt col,const PetscScalar v[],InsertMode is,PetscInt orow,PetscInt ocol) |
256 | { |
257 | Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; |
258 | PetscInt *rp,low,high,t,ii,jj,nrow,i,rmax,N; |
259 | PetscInt *imax=a->imax,*ai=a->i,*ailen=a->ilen; |
260 | PetscErrorCode ierr; |
261 | PetscInt *aj =a->j,nonew=a->nonew,bs2=a->bs2,bs=A->rmap->bs; |
262 | PetscBool roworiented=a->roworiented; |
263 | const PetscScalar *value = v; |
264 | MatScalar *ap,*aa = a->a,*bap; |
265 | |
266 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 266; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
267 | rp = aj + ai[row]; |
268 | ap = aa + bs2*ai[row]; |
269 | rmax = imax[row]; |
270 | nrow = ailen[row]; |
271 | value = v; |
272 | low = 0; |
273 | high = nrow; |
274 | while (high-low > 7) { |
275 | t = (low+high)/2; |
276 | if (rp[t] > col) high = t; |
277 | else low = t; |
278 | } |
279 | for (i=low; i<high; i++) { |
280 | if (rp[i] > col) break; |
281 | if (rp[i] == col) { |
282 | bap = ap + bs2*i; |
283 | if (roworiented) { |
284 | if (is == ADD_VALUES) { |
285 | for (ii=0; ii<bs; ii++) { |
286 | for (jj=ii; jj<bs2; jj+=bs) { |
287 | bap[jj] += *value++; |
288 | } |
289 | } |
290 | } else { |
291 | for (ii=0; ii<bs; ii++) { |
292 | for (jj=ii; jj<bs2; jj+=bs) { |
293 | bap[jj] = *value++; |
294 | } |
295 | } |
296 | } |
297 | } else { |
298 | if (is == ADD_VALUES) { |
299 | for (ii=0; ii<bs; ii++,value+=bs) { |
300 | for (jj=0; jj<bs; jj++) { |
301 | bap[jj] += value[jj]; |
302 | } |
303 | bap += bs; |
304 | } |
305 | } else { |
306 | for (ii=0; ii<bs; ii++,value+=bs) { |
307 | for (jj=0; jj<bs; jj++) { |
308 | bap[jj] = value[jj]; |
309 | } |
310 | bap += bs; |
311 | } |
312 | } |
313 | } |
314 | goto noinsert2; |
315 | } |
316 | } |
317 | if (nonew == 1) goto noinsert2; |
318 | if (nonew == -1) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new global block indexed nonzero block (%D, %D) in the matrix", orow, ocol)return PetscError(((MPI_Comm)0x44000001),318,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Inserting a new global block indexed nonzero block (%D, %D) in the matrix" ,orow,ocol); |
319 | MatSeqXAIJReallocateAIJ(A,a->mbs,bs2,nrow,row,col,rmax,aa,ai,aj,rp,ap,imax,nonew,MatScalar)if (nrow >= rmax) { Mat_SeqAIJ *Ain = (Mat_SeqAIJ*)A->data ; PetscInt CHUNKSIZE = 15,new_nz = ai[a->mbs] + CHUNKSIZE, len,*new_i=0,*new_j=0; MatScalar *new_a; if (nonew == -2) return PetscError(((MPI_Comm)0x44000001),319,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"New nonzero at (%D,%D) caused a malloc\nUse MatSetOption(A, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE) to turn off this check" ,row,col); ierr = PetscMallocA(3,PETSC_FALSE,319,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(bs2*new_nz)*sizeof(**(&new_a)),(&new_a),(size_t )(new_nz)*sizeof(**(&new_j)),(&new_j),(size_t)(a-> mbs+1)*sizeof(**(&new_i)),(&new_i));do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),319,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); for (ii=0; ii<row +1; ii++) {new_i[ii] = ai[ii];} for (ii=row+1; ii<a->mbs +1; ii++) {new_i[ii] = ai[ii]+CHUNKSIZE;} ierr = ((sizeof(*(new_j )) != sizeof(*(aj))) || PetscMemcpy(new_j,aj,(ai[row]+nrow)*sizeof (*(new_j))));do {if (__builtin_expect(!!(ierr),0)) return PetscError (((MPI_Comm)0x44000001),319,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); len = (new_nz - CHUNKSIZE - ai[row] - nrow); ierr = ((sizeof(*(new_j+ai[row]+nrow+CHUNKSIZE )) != sizeof(*(aj+ai[row]+nrow))) || PetscMemcpy(new_j+ai[row ]+nrow+CHUNKSIZE,aj+ai[row]+nrow,(len)*sizeof(*(new_j+ai[row] +nrow+CHUNKSIZE))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),319,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( new_a)) != sizeof(*(aa))) || PetscMemcpy(new_a,aa,(bs2*(ai[row ]+nrow))*sizeof(*(new_a))));do {if (__builtin_expect(!!(ierr) ,0)) return PetscError(((MPI_Comm)0x44000001),319,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = PetscMemzero (new_a+bs2*(ai[row]+nrow),(bs2*CHUNKSIZE)*sizeof(*(new_a+bs2* (ai[row]+nrow))));do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),319,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = ((sizeof(*( new_a+bs2*(ai[row]+nrow+CHUNKSIZE))) != sizeof(*(aa+bs2*(ai[row ]+nrow)))) || PetscMemcpy(new_a+bs2*(ai[row]+nrow+CHUNKSIZE), aa+bs2*(ai[row]+nrow),(bs2*len)*sizeof(*(new_a+bs2*(ai[row]+nrow +CHUNKSIZE)))));do {if (__builtin_expect(!!(ierr),0)) return PetscError (((MPI_Comm)0x44000001),319,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); ierr = MatSeqXAIJFreeAIJ (A,&Ain->a,&Ain->j,&Ain->i);do {if (__builtin_expect (!!(ierr),0)) return PetscError(((MPI_Comm)0x44000001),319,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); aa = new_a; Ain-> a = (MatScalar*) new_a; ai = Ain->i = new_i; aj = Ain-> j = new_j; Ain->singlemalloc = PETSC_TRUE; rp = aj + ai[row ]; ap = aa + bs2*ai[row]; rmax = imax[row] = imax[row] + CHUNKSIZE ; Ain->maxnz += bs2*CHUNKSIZE; Ain->reallocs++; }; |
320 | N = nrow++ - 1; high++; |
321 | /* shift up all the later entries in this row */ |
322 | ierr = PetscArraymove(rp+i+1,rp+i,N-i+1)((sizeof(*(rp+i+1)) != sizeof(*(rp+i))) || PetscMemmove(rp+i+ 1,rp+i,(N-i+1)*sizeof(*(rp+i+1))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),322,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
323 | ierr = PetscArraymove(ap+bs2*(i+1),ap+bs2*i,bs2*(N-i+1))((sizeof(*(ap+bs2*(i+1))) != sizeof(*(ap+bs2*i))) || PetscMemmove (ap+bs2*(i+1),ap+bs2*i,(bs2*(N-i+1))*sizeof(*(ap+bs2*(i+1)))) );CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),323,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
324 | rp[i] = col; |
325 | bap = ap + bs2*i; |
326 | if (roworiented) { |
327 | for (ii=0; ii<bs; ii++) { |
328 | for (jj=ii; jj<bs2; jj+=bs) { |
329 | bap[jj] = *value++; |
330 | } |
331 | } |
332 | } else { |
333 | for (ii=0; ii<bs; ii++) { |
334 | for (jj=0; jj<bs; jj++) { |
335 | *bap++ = *value++; |
336 | } |
337 | } |
338 | } |
339 | noinsert2:; |
340 | ailen[row] = nrow; |
341 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
342 | } |
343 | |
344 | /* |
345 | This routine should be optimized so that the block copy at ** Here a copy is required ** below is not needed |
346 | by passing additional stride information into the MatSetValuesBlocked_SeqBAIJ_Inlined() routine |
347 | */ |
348 | PetscErrorCode MatSetValuesBlocked_MPIBAIJ(Mat mat,PetscInt m,const PetscInt im[],PetscInt n,const PetscInt in[],const PetscScalar v[],InsertMode addv) |
349 | { |
350 | Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data; |
351 | const PetscScalar *value; |
352 | MatScalar *barray = baij->barray; |
353 | PetscBool roworiented = baij->roworiented; |
354 | PetscErrorCode ierr; |
355 | PetscInt i,j,ii,jj,row,col,rstart=baij->rstartbs; |
356 | PetscInt rend=baij->rendbs,cstart=baij->cstartbs,stepval; |
357 | PetscInt cend=baij->cendbs,bs=mat->rmap->bs,bs2=baij->bs2; |
358 | |
359 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 359; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
360 | if (!barray) { |
361 | ierr = PetscMalloc1(bs2,&barray)PetscMallocA(1,PETSC_FALSE,361,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(bs2)*sizeof(**(&barray)),(&barray));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),361,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
362 | baij->barray = barray; |
363 | } |
364 | |
365 | if (roworiented) stepval = (n-1)*bs; |
366 | else stepval = (m-1)*bs; |
367 | |
368 | for (i=0; i<m; i++) { |
369 | if (im[i] < 0) continue; |
370 | #if defined(PETSC_USE_DEBUG1) |
371 | if (im[i] >= baij->Mbs) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Block indexed row too large %D max %D",im[i],baij->Mbs-1)return PetscError(((MPI_Comm)0x44000001),371,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Block indexed row too large %D max %D" ,im[i],baij->Mbs-1); |
372 | #endif |
373 | if (im[i] >= rstart && im[i] < rend) { |
374 | row = im[i] - rstart; |
375 | for (j=0; j<n; j++) { |
376 | /* If NumCol = 1 then a copy is not required */ |
377 | if ((roworiented) && (n == 1)) { |
378 | barray = (MatScalar*)v + i*bs2; |
379 | } else if ((!roworiented) && (m == 1)) { |
380 | barray = (MatScalar*)v + j*bs2; |
381 | } else { /* Here a copy is required */ |
382 | if (roworiented) { |
383 | value = v + (i*(stepval+bs) + j)*bs; |
384 | } else { |
385 | value = v + (j*(stepval+bs) + i)*bs; |
386 | } |
387 | for (ii=0; ii<bs; ii++,value+=bs+stepval) { |
388 | for (jj=0; jj<bs; jj++) barray[jj] = value[jj]; |
389 | barray += bs; |
390 | } |
391 | barray -= bs2; |
392 | } |
393 | |
394 | if (in[j] >= cstart && in[j] < cend) { |
395 | col = in[j] - cstart; |
396 | ierr = MatSetValuesBlocked_SeqBAIJ_Inlined(baij->A,row,col,barray,addv,im[i],in[j]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),396,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
397 | } else if (in[j] < 0) continue; |
398 | #if defined(PETSC_USE_DEBUG1) |
399 | else if (in[j] >= baij->Nbs) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Block indexed column too large %D max %D",in[j],baij->Nbs-1)return PetscError(((MPI_Comm)0x44000001),399,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Block indexed column too large %D max %D" ,in[j],baij->Nbs-1); |
400 | #endif |
401 | else { |
402 | if (mat->was_assembled) { |
403 | if (!baij->colmap) { |
404 | ierr = MatCreateColmap_MPIBAIJ_Private(mat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),404,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
405 | } |
406 | |
407 | #if defined(PETSC_USE_DEBUG1) |
408 | #if defined(PETSC_USE_CTABLE1) |
409 | { PetscInt data; |
410 | ierr = PetscTableFind(baij->colmap,in[j]+1,&data);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),410,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
411 | if ((data - 1) % bs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Incorrect colmap")return PetscError(((MPI_Comm)0x44000001),411,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,77,PETSC_ERROR_INITIAL,"Incorrect colmap"); |
412 | } |
413 | #else |
414 | if ((baij->colmap[in[j]] - 1) % bs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Incorrect colmap")return PetscError(((MPI_Comm)0x44000001),414,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,77,PETSC_ERROR_INITIAL,"Incorrect colmap"); |
415 | #endif |
416 | #endif |
417 | #if defined(PETSC_USE_CTABLE1) |
418 | ierr = PetscTableFind(baij->colmap,in[j]+1,&col);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),418,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
419 | col = (col - 1)/bs; |
420 | #else |
421 | col = (baij->colmap[in[j]] - 1)/bs; |
422 | #endif |
423 | if (col < 0 && !((Mat_SeqBAIJ*)(baij->B->data))->nonew) { |
424 | ierr = MatDisAssemble_MPIBAIJ(mat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),424,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
425 | col = in[j]; |
426 | } else if (col < 0) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new blocked indexed nonzero block (%D, %D) into matrix",im[i],in[j])return PetscError(((MPI_Comm)0x44000001),426,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Inserting a new blocked indexed nonzero block (%D, %D) into matrix" ,im[i],in[j]); |
427 | } else col = in[j]; |
428 | ierr = MatSetValuesBlocked_SeqBAIJ_Inlined(baij->B,row,col,barray,addv,im[i],in[j]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),428,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
429 | } |
430 | } |
431 | } else { |
432 | if (mat->nooffprocentries) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Setting off process block indexed row %D even though MatSetOption(,MAT_NO_OFF_PROC_ENTRIES,PETSC_TRUE) was set",im[i])return PetscError(((MPI_Comm)0x44000001),432,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,62,PETSC_ERROR_INITIAL,"Setting off process block indexed row %D even though MatSetOption(,MAT_NO_OFF_PROC_ENTRIES,PETSC_TRUE) was set" ,im[i]); |
433 | if (!baij->donotstash) { |
434 | if (roworiented) { |
435 | ierr = MatStashValuesRowBlocked_Private(&mat->bstash,im[i],n,in,v,m,n,i);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),435,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
436 | } else { |
437 | ierr = MatStashValuesColBlocked_Private(&mat->bstash,im[i],n,in,v,m,n,i);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),437,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
438 | } |
439 | } |
440 | } |
441 | } |
442 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
443 | } |
444 | |
445 | #define HASH_KEY0.6180339887 0.6180339887 |
446 | #define HASH(size,key,tmp)(tmp = (key)*0.6180339887,(PetscInt)((size)*(tmp-(PetscInt)tmp ))) (tmp = (key)*HASH_KEY0.6180339887,(PetscInt)((size)*(tmp-(PetscInt)tmp))) |
447 | /* #define HASH(size,key) ((PetscInt)((size)*fmod(((key)*HASH_KEY),1))) */ |
448 | /* #define HASH(size,key,tmp) ((PetscInt)((size)*fmod(((key)*HASH_KEY),1))) */ |
449 | PetscErrorCode MatSetValues_MPIBAIJ_HT(Mat mat,PetscInt m,const PetscInt im[],PetscInt n,const PetscInt in[],const PetscScalar v[],InsertMode addv) |
450 | { |
451 | Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data; |
452 | PetscBool roworiented = baij->roworiented; |
453 | PetscErrorCode ierr; |
454 | PetscInt i,j,row,col; |
455 | PetscInt rstart_orig=mat->rmap->rstart; |
456 | PetscInt rend_orig =mat->rmap->rend,Nbs=baij->Nbs; |
457 | PetscInt h1,key,size=baij->ht_size,bs=mat->rmap->bs,*HT=baij->ht,idx; |
458 | PetscReal tmp; |
459 | MatScalar **HD = baij->hd,value; |
460 | #if defined(PETSC_USE_DEBUG1) |
461 | PetscInt total_ct=baij->ht_total_ct,insert_ct=baij->ht_insert_ct; |
462 | #endif |
463 | |
464 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 464; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
465 | for (i=0; i<m; i++) { |
466 | #if defined(PETSC_USE_DEBUG1) |
467 | if (im[i] < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Negative row")return PetscError(((MPI_Comm)0x44000001),467,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Negative row"); |
468 | if (im[i] >= mat->rmap->N) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large: row %D max %D",im[i],mat->rmap->N-1)return PetscError(((MPI_Comm)0x44000001),468,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Row too large: row %D max %D",im[i], mat->rmap->N-1); |
469 | #endif |
470 | row = im[i]; |
471 | if (row >= rstart_orig && row < rend_orig) { |
472 | for (j=0; j<n; j++) { |
473 | col = in[j]; |
474 | if (roworiented) value = v[i*n+j]; |
475 | else value = v[i+j*m]; |
476 | /* Look up PetscInto the Hash Table */ |
477 | key = (row/bs)*Nbs+(col/bs)+1; |
478 | h1 = HASH(size,key,tmp)(tmp = (key)*0.6180339887,(PetscInt)((size)*(tmp-(PetscInt)tmp ))); |
479 | |
480 | |
481 | idx = h1; |
482 | #if defined(PETSC_USE_DEBUG1) |
483 | insert_ct++; |
484 | total_ct++; |
485 | if (HT[idx] != key) { |
486 | for (idx=h1; (idx<size) && (HT[idx]!=key); idx++,total_ct++) ; |
487 | if (idx == size) { |
488 | for (idx=0; (idx<h1) && (HT[idx]!=key); idx++,total_ct++) ; |
489 | if (idx == h1) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"(%D,%D) has no entry in the hash table", row, col)return PetscError(((MPI_Comm)0x44000001),489,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"(%D,%D) has no entry in the hash table" ,row,col); |
490 | } |
491 | } |
492 | #else |
493 | if (HT[idx] != key) { |
494 | for (idx=h1; (idx<size) && (HT[idx]!=key); idx++) ; |
495 | if (idx == size) { |
496 | for (idx=0; (idx<h1) && (HT[idx]!=key); idx++) ; |
497 | if (idx == h1) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"(%D,%D) has no entry in the hash table", row, col)return PetscError(((MPI_Comm)0x44000001),497,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"(%D,%D) has no entry in the hash table" ,row,col); |
498 | } |
499 | } |
500 | #endif |
501 | /* A HASH table entry is found, so insert the values at the correct address */ |
502 | if (addv == ADD_VALUES) *(HD[idx]+ (col % bs)*bs + (row % bs)) += value; |
503 | else *(HD[idx]+ (col % bs)*bs + (row % bs)) = value; |
504 | } |
505 | } else if (!baij->donotstash) { |
506 | if (roworiented) { |
507 | ierr = MatStashValuesRow_Private(&mat->stash,im[i],n,in,v+i*n,PETSC_FALSE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),507,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
508 | } else { |
509 | ierr = MatStashValuesCol_Private(&mat->stash,im[i],n,in,v+i,m,PETSC_FALSE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),509,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
510 | } |
511 | } |
512 | } |
513 | #if defined(PETSC_USE_DEBUG1) |
514 | baij->ht_total_ct += total_ct; |
515 | baij->ht_insert_ct += insert_ct; |
516 | #endif |
517 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
518 | } |
519 | |
520 | PetscErrorCode MatSetValuesBlocked_MPIBAIJ_HT(Mat mat,PetscInt m,const PetscInt im[],PetscInt n,const PetscInt in[],const PetscScalar v[],InsertMode addv) |
521 | { |
522 | Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data; |
523 | PetscBool roworiented = baij->roworiented; |
524 | PetscErrorCode ierr; |
525 | PetscInt i,j,ii,jj,row,col; |
526 | PetscInt rstart=baij->rstartbs; |
527 | PetscInt rend =mat->rmap->rend,stepval,bs=mat->rmap->bs,bs2=baij->bs2,nbs2=n*bs2; |
528 | PetscInt h1,key,size=baij->ht_size,idx,*HT=baij->ht,Nbs=baij->Nbs; |
529 | PetscReal tmp; |
530 | MatScalar **HD = baij->hd,*baij_a; |
531 | const PetscScalar *v_t,*value; |
532 | #if defined(PETSC_USE_DEBUG1) |
533 | PetscInt total_ct=baij->ht_total_ct,insert_ct=baij->ht_insert_ct; |
534 | #endif |
535 | |
536 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 536; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
537 | if (roworiented) stepval = (n-1)*bs; |
538 | else stepval = (m-1)*bs; |
539 | |
540 | for (i=0; i<m; i++) { |
541 | #if defined(PETSC_USE_DEBUG1) |
542 | if (im[i] < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Negative row: %D",im[i])return PetscError(((MPI_Comm)0x44000001),542,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Negative row: %D",im[i]); |
543 | if (im[i] >= baij->Mbs) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large: row %D max %D",im[i],baij->Mbs-1)return PetscError(((MPI_Comm)0x44000001),543,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Row too large: row %D max %D",im[i], baij->Mbs-1); |
544 | #endif |
545 | row = im[i]; |
546 | v_t = v + i*nbs2; |
547 | if (row >= rstart && row < rend) { |
548 | for (j=0; j<n; j++) { |
549 | col = in[j]; |
550 | |
551 | /* Look up into the Hash Table */ |
552 | key = row*Nbs+col+1; |
553 | h1 = HASH(size,key,tmp)(tmp = (key)*0.6180339887,(PetscInt)((size)*(tmp-(PetscInt)tmp ))); |
554 | |
555 | idx = h1; |
556 | #if defined(PETSC_USE_DEBUG1) |
557 | total_ct++; |
558 | insert_ct++; |
559 | if (HT[idx] != key) { |
560 | for (idx=h1; (idx<size) && (HT[idx]!=key); idx++,total_ct++) ; |
561 | if (idx == size) { |
562 | for (idx=0; (idx<h1) && (HT[idx]!=key); idx++,total_ct++) ; |
563 | if (idx == h1) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"(%D,%D) has no entry in the hash table", row, col)return PetscError(((MPI_Comm)0x44000001),563,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"(%D,%D) has no entry in the hash table" ,row,col); |
564 | } |
565 | } |
566 | #else |
567 | if (HT[idx] != key) { |
568 | for (idx=h1; (idx<size) && (HT[idx]!=key); idx++) ; |
569 | if (idx == size) { |
570 | for (idx=0; (idx<h1) && (HT[idx]!=key); idx++) ; |
571 | if (idx == h1) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"(%D,%D) has no entry in the hash table", row, col)return PetscError(((MPI_Comm)0x44000001),571,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"(%D,%D) has no entry in the hash table" ,row,col); |
572 | } |
573 | } |
574 | #endif |
575 | baij_a = HD[idx]; |
576 | if (roworiented) { |
577 | /*value = v + i*(stepval+bs)*bs + j*bs;*/ |
578 | /* value = v + (i*(stepval+bs)+j)*bs; */ |
579 | value = v_t; |
580 | v_t += bs; |
581 | if (addv == ADD_VALUES) { |
582 | for (ii=0; ii<bs; ii++,value+=stepval) { |
583 | for (jj=ii; jj<bs2; jj+=bs) { |
584 | baij_a[jj] += *value++; |
585 | } |
586 | } |
587 | } else { |
588 | for (ii=0; ii<bs; ii++,value+=stepval) { |
589 | for (jj=ii; jj<bs2; jj+=bs) { |
590 | baij_a[jj] = *value++; |
591 | } |
592 | } |
593 | } |
594 | } else { |
595 | value = v + j*(stepval+bs)*bs + i*bs; |
596 | if (addv == ADD_VALUES) { |
597 | for (ii=0; ii<bs; ii++,value+=stepval,baij_a+=bs) { |
598 | for (jj=0; jj<bs; jj++) { |
599 | baij_a[jj] += *value++; |
600 | } |
601 | } |
602 | } else { |
603 | for (ii=0; ii<bs; ii++,value+=stepval,baij_a+=bs) { |
604 | for (jj=0; jj<bs; jj++) { |
605 | baij_a[jj] = *value++; |
606 | } |
607 | } |
608 | } |
609 | } |
610 | } |
611 | } else { |
612 | if (!baij->donotstash) { |
613 | if (roworiented) { |
614 | ierr = MatStashValuesRowBlocked_Private(&mat->bstash,im[i],n,in,v,m,n,i);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),614,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
615 | } else { |
616 | ierr = MatStashValuesColBlocked_Private(&mat->bstash,im[i],n,in,v,m,n,i);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),616,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
617 | } |
618 | } |
619 | } |
620 | } |
621 | #if defined(PETSC_USE_DEBUG1) |
622 | baij->ht_total_ct += total_ct; |
623 | baij->ht_insert_ct += insert_ct; |
624 | #endif |
625 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
626 | } |
627 | |
628 | PetscErrorCode MatGetValues_MPIBAIJ(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],PetscScalar v[]) |
629 | { |
630 | Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data; |
631 | PetscErrorCode ierr; |
632 | PetscInt bs = mat->rmap->bs,i,j,bsrstart = mat->rmap->rstart,bsrend = mat->rmap->rend; |
633 | PetscInt bscstart = mat->cmap->rstart,bscend = mat->cmap->rend,row,col,data; |
634 | |
635 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 635; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
636 | for (i=0; i<m; i++) { |
637 | if (idxm[i] < 0) continue; /* SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Negative row: %D",idxm[i]);*/ |
638 | if (idxm[i] >= mat->rmap->N) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large: row %D max %D",idxm[i],mat->rmap->N-1)return PetscError(((MPI_Comm)0x44000001),638,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Row too large: row %D max %D",idxm[i ],mat->rmap->N-1); |
639 | if (idxm[i] >= bsrstart && idxm[i] < bsrend) { |
640 | row = idxm[i] - bsrstart; |
641 | for (j=0; j<n; j++) { |
642 | if (idxn[j] < 0) continue; /* SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Negative column: %D",idxn[j]); */ |
643 | if (idxn[j] >= mat->cmap->N) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large: col %D max %D",idxn[j],mat->cmap->N-1)return PetscError(((MPI_Comm)0x44000001),643,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Column too large: col %D max %D",idxn [j],mat->cmap->N-1); |
644 | if (idxn[j] >= bscstart && idxn[j] < bscend) { |
645 | col = idxn[j] - bscstart; |
646 | ierr = MatGetValues_SeqBAIJ(baij->A,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),646,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
647 | } else { |
648 | if (!baij->colmap) { |
649 | ierr = MatCreateColmap_MPIBAIJ_Private(mat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),649,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
650 | } |
651 | #if defined(PETSC_USE_CTABLE1) |
652 | ierr = PetscTableFind(baij->colmap,idxn[j]/bs+1,&data);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),652,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
653 | data--; |
654 | #else |
655 | data = baij->colmap[idxn[j]/bs]-1; |
656 | #endif |
657 | if ((data < 0) || (baij->garray[data/bs] != idxn[j]/bs)) *(v+i*n+j) = 0.0; |
658 | else { |
659 | col = data + idxn[j]%bs; |
660 | ierr = MatGetValues_SeqBAIJ(baij->B,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),660,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
661 | } |
662 | } |
663 | } |
664 | } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only local values currently supported")return PetscError(((MPI_Comm)0x44000001),664,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,56,PETSC_ERROR_INITIAL,"Only local values currently supported" ); |
665 | } |
666 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
667 | } |
668 | |
669 | PetscErrorCode MatNorm_MPIBAIJ(Mat mat,NormType type,PetscReal *nrm) |
670 | { |
671 | Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data; |
672 | Mat_SeqBAIJ *amat = (Mat_SeqBAIJ*)baij->A->data,*bmat = (Mat_SeqBAIJ*)baij->B->data; |
673 | PetscErrorCode ierr; |
674 | PetscInt i,j,bs2=baij->bs2,bs=baij->A->rmap->bs,nz,row,col; |
675 | PetscReal sum = 0.0; |
676 | MatScalar *v; |
677 | |
678 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 678; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
679 | if (baij->size == 1) { |
680 | ierr = MatNorm(baij->A,type,nrm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),680,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
681 | } else { |
682 | if (type == NORM_FROBENIUS) { |
683 | v = amat->a; |
684 | nz = amat->nz*bs2; |
685 | for (i=0; i<nz; i++) { |
686 | sum += PetscRealPart(PetscConj(*v)*(*v))((*v)*(*v)); v++; |
687 | } |
688 | v = bmat->a; |
689 | nz = bmat->nz*bs2; |
690 | for (i=0; i<nz; i++) { |
691 | sum += PetscRealPart(PetscConj(*v)*(*v))((*v)*(*v)); v++; |
692 | } |
693 | ierr = MPIU_Allreduce(&sum,nrm,1,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)mat))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject)mat) ,1,693,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm ((PetscObject)mat))),0) || MPI_Allreduce((&sum),(nrm),(1) ,(((MPI_Datatype)0x4c00080b)),((MPI_Op)(0x58000003)),(PetscObjectComm ((PetscObject)mat)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),693,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
694 | *nrm = PetscSqrtReal(*nrm)sqrt(*nrm); |
695 | } else if (type == NORM_1) { /* max column sum */ |
696 | PetscReal *tmp,*tmp2; |
697 | PetscInt *jj,*garray=baij->garray,cstart=baij->rstartbs; |
698 | ierr = PetscCalloc1(mat->cmap->N,&tmp)PetscMallocA(1,PETSC_TRUE,698,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(mat->cmap->N)*sizeof(**(&tmp)),(&tmp) );CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),698,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
699 | ierr = PetscMalloc1(mat->cmap->N,&tmp2)PetscMallocA(1,PETSC_FALSE,699,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(mat->cmap->N)*sizeof(**(&tmp2)),(&tmp2 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),699,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
700 | v = amat->a; jj = amat->j; |
701 | for (i=0; i<amat->nz; i++) { |
702 | for (j=0; j<bs; j++) { |
703 | col = bs*(cstart + *jj) + j; /* column index */ |
704 | for (row=0; row<bs; row++) { |
705 | tmp[col] += PetscAbsScalar(*v)fabs(*v); v++; |
706 | } |
707 | } |
708 | jj++; |
709 | } |
710 | v = bmat->a; jj = bmat->j; |
711 | for (i=0; i<bmat->nz; i++) { |
712 | for (j=0; j<bs; j++) { |
713 | col = bs*garray[*jj] + j; |
714 | for (row=0; row<bs; row++) { |
715 | tmp[col] += PetscAbsScalar(*v)fabs(*v); v++; |
716 | } |
717 | } |
718 | jj++; |
719 | } |
720 | ierr = MPIU_Allreduce(tmp,tmp2,mat->cmap->N,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)mat))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject)mat) ,mat->cmap->N,720,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm ((PetscObject)mat))),0) || MPI_Allreduce((tmp),(tmp2),(mat-> cmap->N),(((MPI_Datatype)0x4c00080b)),((MPI_Op)(0x58000003 )),(PetscObjectComm((PetscObject)mat)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),720,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
721 | *nrm = 0.0; |
722 | for (j=0; j<mat->cmap->N; j++) { |
723 | if (tmp2[j] > *nrm) *nrm = tmp2[j]; |
724 | } |
725 | ierr = PetscFree(tmp)((*PetscTrFree)((void*)(tmp),725,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((tmp) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),725,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
726 | ierr = PetscFree(tmp2)((*PetscTrFree)((void*)(tmp2),726,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((tmp2) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),726,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
727 | } else if (type == NORM_INFINITY) { /* max row sum */ |
728 | PetscReal *sums; |
729 | ierr = PetscMalloc1(bs,&sums)PetscMallocA(1,PETSC_FALSE,729,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(bs)*sizeof(**(&sums)),(&sums));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),729,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
730 | sum = 0.0; |
731 | for (j=0; j<amat->mbs; j++) { |
732 | for (row=0; row<bs; row++) sums[row] = 0.0; |
733 | v = amat->a + bs2*amat->i[j]; |
734 | nz = amat->i[j+1]-amat->i[j]; |
735 | for (i=0; i<nz; i++) { |
736 | for (col=0; col<bs; col++) { |
737 | for (row=0; row<bs; row++) { |
738 | sums[row] += PetscAbsScalar(*v)fabs(*v); v++; |
739 | } |
740 | } |
741 | } |
742 | v = bmat->a + bs2*bmat->i[j]; |
743 | nz = bmat->i[j+1]-bmat->i[j]; |
744 | for (i=0; i<nz; i++) { |
745 | for (col=0; col<bs; col++) { |
746 | for (row=0; row<bs; row++) { |
747 | sums[row] += PetscAbsScalar(*v)fabs(*v); v++; |
748 | } |
749 | } |
750 | } |
751 | for (row=0; row<bs; row++) { |
752 | if (sums[row] > sum) sum = sums[row]; |
753 | } |
754 | } |
755 | ierr = MPIU_Allreduce(&sum,nrm,1,MPIU_REAL,MPIU_MAX,PetscObjectComm((PetscObject)mat))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject)mat) ,1,755,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm ((PetscObject)mat))),0) || MPI_Allreduce((&sum),(nrm),(1) ,(((MPI_Datatype)0x4c00080b)),((MPI_Op)(0x58000001)),(PetscObjectComm ((PetscObject)mat)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),755,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
756 | ierr = PetscFree(sums)((*PetscTrFree)((void*)(sums),756,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((sums) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),756,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
757 | } else SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_SUP,"No support for this norm yet")return PetscError(PetscObjectComm((PetscObject)mat),757,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,56,PETSC_ERROR_INITIAL,"No support for this norm yet"); |
758 | } |
759 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
760 | } |
761 | |
762 | /* |
763 | Creates the hash table, and sets the table |
764 | This table is created only once. |
765 | If new entried need to be added to the matrix |
766 | then the hash table has to be destroyed and |
767 | recreated. |
768 | */ |
769 | PetscErrorCode MatCreateHashTable_MPIBAIJ_Private(Mat mat,PetscReal factor) |
770 | { |
771 | Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data; |
772 | Mat A = baij->A,B=baij->B; |
773 | Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*b=(Mat_SeqBAIJ*)B->data; |
774 | PetscInt i,j,k,nz=a->nz+b->nz,h1,*ai=a->i,*aj=a->j,*bi=b->i,*bj=b->j; |
775 | PetscErrorCode ierr; |
776 | PetscInt ht_size,bs2=baij->bs2,rstart=baij->rstartbs; |
777 | PetscInt cstart=baij->cstartbs,*garray=baij->garray,row,col,Nbs=baij->Nbs; |
778 | PetscInt *HT,key; |
779 | MatScalar **HD; |
780 | PetscReal tmp; |
781 | #if defined(PETSC_USE_INFO1) |
782 | PetscInt ct=0,max=0; |
783 | #endif |
784 | |
785 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 785; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
786 | if (baij->ht) PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
787 | |
788 | baij->ht_size = (PetscInt)(factor*nz); |
789 | ht_size = baij->ht_size; |
790 | |
791 | /* Allocate Memory for Hash Table */ |
792 | ierr = PetscCalloc2(ht_size,&baij->hd,ht_size,&baij->ht)PetscMallocA(2,PETSC_TRUE,792,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(ht_size)*sizeof(**(&baij->hd)),(&baij-> hd),(size_t)(ht_size)*sizeof(**(&baij->ht)),(&baij ->ht));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),792,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
793 | HD = baij->hd; |
794 | HT = baij->ht; |
795 | |
796 | /* Loop Over A */ |
797 | for (i=0; i<a->mbs; i++) { |
798 | for (j=ai[i]; j<ai[i+1]; j++) { |
799 | row = i+rstart; |
800 | col = aj[j]+cstart; |
801 | |
802 | key = row*Nbs + col + 1; |
803 | h1 = HASH(ht_size,key,tmp)(tmp = (key)*0.6180339887,(PetscInt)((ht_size)*(tmp-(PetscInt )tmp))); |
804 | for (k=0; k<ht_size; k++) { |
805 | if (!HT[(h1+k)%ht_size]) { |
806 | HT[(h1+k)%ht_size] = key; |
807 | HD[(h1+k)%ht_size] = a->a + j*bs2; |
808 | break; |
809 | #if defined(PETSC_USE_INFO1) |
810 | } else { |
811 | ct++; |
812 | #endif |
813 | } |
814 | } |
815 | #if defined(PETSC_USE_INFO1) |
816 | if (k> max) max = k; |
817 | #endif |
818 | } |
819 | } |
820 | /* Loop Over B */ |
821 | for (i=0; i<b->mbs; i++) { |
822 | for (j=bi[i]; j<bi[i+1]; j++) { |
823 | row = i+rstart; |
824 | col = garray[bj[j]]; |
825 | key = row*Nbs + col + 1; |
826 | h1 = HASH(ht_size,key,tmp)(tmp = (key)*0.6180339887,(PetscInt)((ht_size)*(tmp-(PetscInt )tmp))); |
827 | for (k=0; k<ht_size; k++) { |
828 | if (!HT[(h1+k)%ht_size]) { |
829 | HT[(h1+k)%ht_size] = key; |
830 | HD[(h1+k)%ht_size] = b->a + j*bs2; |
831 | break; |
832 | #if defined(PETSC_USE_INFO1) |
833 | } else { |
834 | ct++; |
835 | #endif |
836 | } |
837 | } |
838 | #if defined(PETSC_USE_INFO1) |
839 | if (k> max) max = k; |
840 | #endif |
841 | } |
842 | } |
843 | |
844 | /* Print Summary */ |
845 | #if defined(PETSC_USE_INFO1) |
846 | for (i=0,j=0; i<ht_size; i++) { |
847 | if (HT[i]) j++; |
848 | } |
849 | ierr = PetscInfo2(mat,"Average Search = %5.2f,max search = %D\n",(!j)? 0.0:((PetscReal)(ct+j))/j,max)PetscInfo_Private(__func__,mat,"Average Search = %5.2f,max search = %D\n" ,(!j)? 0.0:((PetscReal)(ct+j))/j,max);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),849,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
850 | #endif |
851 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
852 | } |
853 | |
854 | PetscErrorCode MatAssemblyBegin_MPIBAIJ(Mat mat,MatAssemblyType mode) |
855 | { |
856 | Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data; |
857 | PetscErrorCode ierr; |
858 | PetscInt nstash,reallocs; |
859 | |
860 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 860; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
861 | if (baij->donotstash || mat->nooffprocentries) PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
862 | |
863 | ierr = MatStashScatterBegin_Private(mat,&mat->stash,mat->rmap->range);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),863,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
864 | ierr = MatStashScatterBegin_Private(mat,&mat->bstash,baij->rangebs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),864,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
865 | ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),865,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
866 | ierr = PetscInfo2(mat,"Stash has %D entries,uses %D mallocs.\n",nstash,reallocs)PetscInfo_Private(__func__,mat,"Stash has %D entries,uses %D mallocs.\n" ,nstash,reallocs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),866,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
867 | ierr = MatStashGetInfo_Private(&mat->bstash,&nstash,&reallocs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),867,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
868 | ierr = PetscInfo2(mat,"Block-Stash has %D entries, uses %D mallocs.\n",nstash,reallocs)PetscInfo_Private(__func__,mat,"Block-Stash has %D entries, uses %D mallocs.\n" ,nstash,reallocs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),868,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
869 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
870 | } |
871 | |
872 | PetscErrorCode MatAssemblyEnd_MPIBAIJ(Mat mat,MatAssemblyType mode) |
873 | { |
874 | Mat_MPIBAIJ *baij=(Mat_MPIBAIJ*)mat->data; |
875 | Mat_SeqBAIJ *a =(Mat_SeqBAIJ*)baij->A->data; |
876 | PetscErrorCode ierr; |
877 | PetscInt i,j,rstart,ncols,flg,bs2=baij->bs2; |
878 | PetscInt *row,*col; |
879 | PetscBool r1,r2,r3,other_disassembled; |
880 | MatScalar *val; |
881 | PetscMPIInt n; |
882 | |
883 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 883; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
884 | /* do not use 'b=(Mat_SeqBAIJ*)baij->B->data' as B can be reset in disassembly */ |
885 | if (!baij->donotstash && !mat->nooffprocentries) { |
886 | while (1) { |
887 | ierr = MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),887,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
888 | if (!flg) break; |
889 | |
890 | for (i=0; i<n;) { |
891 | /* Now identify the consecutive vals belonging to the same row */ |
892 | for (j=i,rstart=row[j]; j<n; j++) { |
893 | if (row[j] != rstart) break; |
894 | } |
895 | if (j < n) ncols = j-i; |
896 | else ncols = n-i; |
897 | /* Now assemble all these values with a single function call */ |
898 | ierr = MatSetValues_MPIBAIJ(mat,1,row+i,ncols,col+i,val+i,mat->insertmode);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),898,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
899 | i = j; |
900 | } |
901 | } |
902 | ierr = MatStashScatterEnd_Private(&mat->stash);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),902,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
903 | /* Now process the block-stash. Since the values are stashed column-oriented, |
904 | set the roworiented flag to column oriented, and after MatSetValues() |
905 | restore the original flags */ |
906 | r1 = baij->roworiented; |
907 | r2 = a->roworiented; |
908 | r3 = ((Mat_SeqBAIJ*)baij->B->data)->roworiented; |
909 | |
910 | baij->roworiented = PETSC_FALSE; |
911 | a->roworiented = PETSC_FALSE; |
912 | |
913 | (((Mat_SeqBAIJ*)baij->B->data))->roworiented = PETSC_FALSE; /* b->roworiented */ |
914 | while (1) { |
915 | ierr = MatStashScatterGetMesg_Private(&mat->bstash,&n,&row,&col,&val,&flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),915,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
916 | if (!flg) break; |
917 | |
918 | for (i=0; i<n;) { |
919 | /* Now identify the consecutive vals belonging to the same row */ |
920 | for (j=i,rstart=row[j]; j<n; j++) { |
921 | if (row[j] != rstart) break; |
922 | } |
923 | if (j < n) ncols = j-i; |
924 | else ncols = n-i; |
925 | ierr = MatSetValuesBlocked_MPIBAIJ(mat,1,row+i,ncols,col+i,val+i*bs2,mat->insertmode);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),925,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
926 | i = j; |
927 | } |
928 | } |
929 | ierr = MatStashScatterEnd_Private(&mat->bstash);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),929,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
930 | |
931 | baij->roworiented = r1; |
932 | a->roworiented = r2; |
933 | |
934 | ((Mat_SeqBAIJ*)baij->B->data)->roworiented = r3; /* b->roworiented */ |
935 | } |
936 | |
937 | ierr = MatAssemblyBegin(baij->A,mode);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),937,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
938 | ierr = MatAssemblyEnd(baij->A,mode);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),938,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
939 | |
940 | /* determine if any processor has disassembled, if so we must |
941 | also disassemble ourselfs, in order that we may reassemble. */ |
942 | /* |
943 | if nonzero structure of submatrix B cannot change then we know that |
944 | no processor disassembled thus we can skip this stuff |
945 | */ |
946 | if (!((Mat_SeqBAIJ*)baij->B->data)->nonew) { |
947 | ierr = MPIU_Allreduce(&mat->was_assembled,&other_disassembled,1,MPIU_BOOL,MPI_PROD,PetscObjectComm((PetscObject)mat))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject)mat) ,1,947,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm ((PetscObject)mat))),0) || MPI_Allreduce((&mat->was_assembled ),(&other_disassembled),(1),(MPIU_BOOL),((MPI_Op)(0x58000004 )),(PetscObjectComm((PetscObject)mat)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),947,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
948 | if (mat->was_assembled && !other_disassembled) { |
949 | ierr = MatDisAssemble_MPIBAIJ(mat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),949,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
950 | } |
951 | } |
952 | |
953 | if (!mat->was_assembled && mode == MAT_FINAL_ASSEMBLY) { |
954 | ierr = MatSetUpMultiply_MPIBAIJ(mat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),954,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
955 | } |
956 | ierr = MatAssemblyBegin(baij->B,mode);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),956,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
957 | ierr = MatAssemblyEnd(baij->B,mode);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),957,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
958 | |
959 | #if defined(PETSC_USE_INFO1) |
960 | if (baij->ht && mode== MAT_FINAL_ASSEMBLY) { |
961 | ierr = PetscInfo1(mat,"Average Hash Table Search in MatSetValues = %5.2f\n",(double)((PetscReal)baij->ht_total_ct)/baij->ht_insert_ct)PetscInfo_Private(__func__,mat,"Average Hash Table Search in MatSetValues = %5.2f\n" ,(double)((PetscReal)baij->ht_total_ct)/baij->ht_insert_ct );CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),961,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
962 | |
963 | baij->ht_total_ct = 0; |
964 | baij->ht_insert_ct = 0; |
965 | } |
966 | #endif |
967 | if (baij->ht_flag && !baij->ht && mode == MAT_FINAL_ASSEMBLY) { |
968 | ierr = MatCreateHashTable_MPIBAIJ_Private(mat,baij->ht_fact);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),968,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
969 | |
970 | mat->ops->setvalues = MatSetValues_MPIBAIJ_HT; |
971 | mat->ops->setvaluesblocked = MatSetValuesBlocked_MPIBAIJ_HT; |
972 | } |
973 | |
974 | ierr = PetscFree2(baij->rowvalues,baij->rowindices)PetscFreeA(2,974,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,&(baij->rowvalues),&(baij->rowindices));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),974,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
975 | |
976 | baij->rowvalues = 0; |
977 | |
978 | /* if no new nonzero locations are allowed in matrix then only set the matrix state the first time through */ |
979 | if ((!mat->was_assembled && mode == MAT_FINAL_ASSEMBLY) || !((Mat_SeqBAIJ*)(baij->A->data))->nonew) { |
980 | PetscObjectState state = baij->A->nonzerostate + baij->B->nonzerostate; |
981 | ierr = MPIU_Allreduce(&state,&mat->nonzerostate,1,MPIU_INT64,MPI_SUM,PetscObjectComm((PetscObject)mat))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject)mat) ,1,981,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm ((PetscObject)mat))),0) || MPI_Allreduce((&state),(&mat ->nonzerostate),(1),(((MPI_Datatype)0x4c00083a)),((MPI_Op) (0x58000003)),(PetscObjectComm((PetscObject)mat)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),981,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
982 | } |
983 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
984 | } |
985 | |
986 | extern PetscErrorCode MatView_SeqBAIJ(Mat,PetscViewer); |
987 | #include <petscdraw.h> |
988 | static PetscErrorCode MatView_MPIBAIJ_ASCIIorDraworSocket(Mat mat,PetscViewer viewer) |
989 | { |
990 | Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data; |
991 | PetscErrorCode ierr; |
992 | PetscMPIInt rank = baij->rank; |
993 | PetscInt bs = mat->rmap->bs; |
994 | PetscBool iascii,isdraw; |
995 | PetscViewer sviewer; |
996 | PetscViewerFormat format; |
997 | |
998 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 998; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
999 | ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII"ascii",&iascii);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),999,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1000 | ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW"draw",&isdraw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1000,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1001 | if (iascii) { |
1002 | ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1002,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1003 | if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { |
1004 | MatInfo info; |
1005 | ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)mat),&rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1005,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1006 | ierr = MatGetInfo(mat,MAT_LOCAL,&info);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1006,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1007 | ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1007,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1008 | ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] Local rows %D nz %D nz alloced %D bs %D mem %g\n", |
1009 | rank,mat->rmap->n,(PetscInt)info.nz_used,(PetscInt)info.nz_allocated,mat->rmap->bs,(double)info.memory);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1009,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1010 | ierr = MatGetInfo(baij->A,MAT_LOCAL,&info);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1010,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1011 | ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] on-diagonal part: nz %D \n",rank,(PetscInt)info.nz_used);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1011,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1012 | ierr = MatGetInfo(baij->B,MAT_LOCAL,&info);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1012,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1013 | ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] off-diagonal part: nz %D \n",rank,(PetscInt)info.nz_used);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1013,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1014 | ierr = PetscViewerFlush(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1014,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1015 | ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1015,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1016 | ierr = PetscViewerASCIIPrintf(viewer,"Information on VecScatter used in matrix-vector product: \n");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1016,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1017 | ierr = VecScatterView(baij->Mvctx,viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1017,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1018 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1019 | } else if (format == PETSC_VIEWER_ASCII_INFO) { |
1020 | ierr = PetscViewerASCIIPrintf(viewer," block size is %D\n",bs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1020,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1021 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1022 | } else if (format == PETSC_VIEWER_ASCII_FACTOR_INFO) { |
1023 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1024 | } |
1025 | } |
1026 | |
1027 | if (isdraw) { |
1028 | PetscDraw draw; |
1029 | PetscBool isnull; |
1030 | ierr = PetscViewerDrawGetDraw(viewer,0,&draw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1030,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1031 | ierr = PetscDrawIsNull(draw,&isnull);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1031,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1032 | if (isnull) PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1033 | } |
1034 | |
1035 | { |
1036 | /* assemble the entire matrix onto first processor. */ |
1037 | Mat A; |
1038 | Mat_SeqBAIJ *Aloc; |
1039 | PetscInt M = mat->rmap->N,N = mat->cmap->N,*ai,*aj,col,i,j,k,*rvals,mbs = baij->mbs; |
1040 | MatScalar *a; |
1041 | const char *matname; |
1042 | |
1043 | /* Here we are creating a temporary matrix, so will assume MPIBAIJ is acceptable */ |
1044 | /* Perhaps this should be the type of mat? */ |
1045 | ierr = MatCreate(PetscObjectComm((PetscObject)mat),&A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1045,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1046 | if (!rank) { |
1047 | ierr = MatSetSizes(A,M,N,M,N);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1047,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1048 | } else { |
1049 | ierr = MatSetSizes(A,0,0,M,N);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1049,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1050 | } |
1051 | ierr = MatSetType(A,MATMPIBAIJ"mpibaij");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1051,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1052 | ierr = MatMPIBAIJSetPreallocation(A,mat->rmap->bs,0,NULL((void*)0),0,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1052,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1053 | ierr = MatSetOption(A,MAT_NEW_NONZERO_LOCATION_ERR,PETSC_FALSE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1053,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1054 | ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1054,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1055 | |
1056 | /* copy over the A part */ |
1057 | Aloc = (Mat_SeqBAIJ*)baij->A->data; |
1058 | ai = Aloc->i; aj = Aloc->j; a = Aloc->a; |
1059 | ierr = PetscMalloc1(bs,&rvals)PetscMallocA(1,PETSC_FALSE,1059,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(bs)*sizeof(**(&rvals)),(&rvals));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1059,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1060 | |
1061 | for (i=0; i<mbs; i++) { |
1062 | rvals[0] = bs*(baij->rstartbs + i); |
1063 | for (j=1; j<bs; j++) rvals[j] = rvals[j-1] + 1; |
1064 | for (j=ai[i]; j<ai[i+1]; j++) { |
1065 | col = (baij->cstartbs+aj[j])*bs; |
1066 | for (k=0; k<bs; k++) { |
1067 | ierr = MatSetValues_MPIBAIJ(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1067,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1068 | col++; a += bs; |
1069 | } |
1070 | } |
1071 | } |
1072 | /* copy over the B part */ |
1073 | Aloc = (Mat_SeqBAIJ*)baij->B->data; |
1074 | ai = Aloc->i; aj = Aloc->j; a = Aloc->a; |
1075 | for (i=0; i<mbs; i++) { |
1076 | rvals[0] = bs*(baij->rstartbs + i); |
1077 | for (j=1; j<bs; j++) rvals[j] = rvals[j-1] + 1; |
1078 | for (j=ai[i]; j<ai[i+1]; j++) { |
1079 | col = baij->garray[aj[j]]*bs; |
1080 | for (k=0; k<bs; k++) { |
1081 | ierr = MatSetValues_MPIBAIJ(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1081,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1082 | col++; a += bs; |
1083 | } |
1084 | } |
1085 | } |
1086 | ierr = PetscFree(rvals)((*PetscTrFree)((void*)(rvals),1086,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((rvals) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1086,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1087 | ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1087,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1088 | ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1088,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1089 | /* |
1090 | Everyone has to call to draw the matrix since the graphics waits are |
1091 | synchronized across all processors that share the PetscDraw object |
1092 | */ |
1093 | ierr = PetscViewerGetSubViewer(viewer,PETSC_COMM_SELF((MPI_Comm)0x44000001),&sviewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1093,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1094 | ierr = PetscObjectGetName((PetscObject)mat,&matname);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1094,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1095 | if (!rank) { |
1096 | ierr = PetscObjectSetName((PetscObject)((Mat_MPIBAIJ*)(A->data))->A,matname);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1096,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1097 | ierr = MatView_SeqBAIJ(((Mat_MPIBAIJ*)(A->data))->A,sviewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1097,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1098 | } |
1099 | ierr = PetscViewerRestoreSubViewer(viewer,PETSC_COMM_SELF((MPI_Comm)0x44000001),&sviewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1099,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1100 | ierr = PetscViewerFlush(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1100,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1101 | ierr = MatDestroy(&A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1101,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1102 | } |
1103 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1104 | } |
1105 | |
1106 | static PetscErrorCode MatView_MPIBAIJ_Binary(Mat mat,PetscViewer viewer) |
1107 | { |
1108 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)mat->data; |
1109 | Mat_SeqBAIJ *A = (Mat_SeqBAIJ*)a->A->data; |
1110 | Mat_SeqBAIJ *B = (Mat_SeqBAIJ*)a->B->data; |
1111 | PetscErrorCode ierr; |
1112 | PetscInt i,*row_lens,*crow_lens,bs = mat->rmap->bs,j,k,bs2=a->bs2,header[4],nz,rlen; |
1113 | PetscInt *range=0,nzmax,*column_indices,cnt,col,*garray = a->garray,cstart = mat->cmap->rstart/bs,len,pcnt,l,ll; |
1114 | int fd; |
1115 | PetscScalar *column_values; |
1116 | FILE *file; |
1117 | PetscMPIInt rank,size,tag = ((PetscObject)viewer)->tag; |
1118 | PetscInt message_count,flowcontrolcount; |
1119 | |
1120 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1120; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1121 | ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)mat),&rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1121,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1122 | ierr = MPI_Comm_size(PetscObjectComm((PetscObject)mat),&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1122,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1123 | nz = bs2*(A->nz + B->nz); |
1124 | rlen = mat->rmap->n; |
1125 | ierr = PetscViewerBinaryGetDescriptor(viewer,&fd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1125,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1126 | if (!rank) { |
1127 | header[0] = MAT_FILE_CLASSID1211216; |
1128 | header[1] = mat->rmap->N; |
1129 | header[2] = mat->cmap->N; |
1130 | |
1131 | ierr = MPI_Reduce(&nz,&header[3],1,MPIU_INT((MPI_Datatype)0x4c000405),MPI_SUM(MPI_Op)(0x58000003),0,PetscObjectComm((PetscObject)mat));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1131,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1132 | ierr = PetscBinaryWrite(fd,header,4,PETSC_INT,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1132,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1133 | /* get largest number of rows any processor has */ |
1134 | range = mat->rmap->range; |
1135 | for (i=1; i<size; i++) { |
1136 | rlen = PetscMax(rlen,range[i+1] - range[i])(((rlen)<(range[i+1] - range[i])) ? (range[i+1] - range[i] ) : (rlen)); |
1137 | } |
1138 | } else { |
1139 | ierr = MPI_Reduce(&nz,0,1,MPIU_INT((MPI_Datatype)0x4c000405),MPI_SUM(MPI_Op)(0x58000003),0,PetscObjectComm((PetscObject)mat));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1139,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1140 | } |
1141 | |
1142 | ierr = PetscMalloc1(rlen/bs,&crow_lens)PetscMallocA(1,PETSC_FALSE,1142,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(rlen/bs)*sizeof(**(&crow_lens)),(&crow_lens ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1142,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1143 | /* compute lengths of each row */ |
1144 | for (i=0; i<a->mbs; i++) { |
1145 | crow_lens[i] = A->i[i+1] - A->i[i] + B->i[i+1] - B->i[i]; |
1146 | } |
1147 | /* store the row lengths to the file */ |
1148 | ierr = PetscViewerFlowControlStart(viewer,&message_count,&flowcontrolcount);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1148,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1149 | if (!rank) { |
1150 | MPI_Status status; |
1151 | ierr = PetscMalloc1(rlen,&row_lens)PetscMallocA(1,PETSC_FALSE,1151,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(rlen)*sizeof(**(&row_lens)),(&row_lens));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1151,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1152 | rlen = (range[1] - range[0])/bs; |
1153 | for (i=0; i<rlen; i++) { |
1154 | for (j=0; j<bs; j++) { |
1155 | row_lens[i*bs+j] = bs*crow_lens[i]; |
1156 | } |
1157 | } |
1158 | ierr = PetscBinaryWrite(fd,row_lens,bs*rlen,PETSC_INT,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1158,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1159 | for (i=1; i<size; i++) { |
1160 | rlen = (range[i+1] - range[i])/bs; |
1161 | ierr = PetscViewerFlowControlStepMaster(viewer,i,&message_count,flowcontrolcount);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1161,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1162 | ierr = MPI_Recv(crow_lens,rlen,MPIU_INT,i,tag,PetscObjectComm((PetscObject)mat),&status)((petsc_recv_ct++,0) || PetscMPITypeSize((rlen),(((MPI_Datatype )0x4c000405)),(&petsc_recv_len)) || MPI_Recv((crow_lens), (rlen),(((MPI_Datatype)0x4c000405)),(i),(tag),(PetscObjectComm ((PetscObject)mat)),(&status)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1162,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1163 | for (k=0; k<rlen; k++) { |
1164 | for (j=0; j<bs; j++) { |
1165 | row_lens[k*bs+j] = bs*crow_lens[k]; |
1166 | } |
1167 | } |
1168 | ierr = PetscBinaryWrite(fd,row_lens,bs*rlen,PETSC_INT,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1168,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1169 | } |
1170 | ierr = PetscViewerFlowControlEndMaster(viewer,&message_count);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1170,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1171 | ierr = PetscFree(row_lens)((*PetscTrFree)((void*)(row_lens),1171,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((row_lens) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1171,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1172 | } else { |
1173 | ierr = PetscViewerFlowControlStepWorker(viewer,rank,&message_count);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1173,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1174 | ierr = MPI_Send(crow_lens,mat->rmap->n/bs,MPIU_INT,0,tag,PetscObjectComm((PetscObject)mat))((petsc_send_ct++,0) || PetscMPITypeSize((mat->rmap->n/ bs),(((MPI_Datatype)0x4c000405)),(&petsc_send_len)) || MPI_Send ((crow_lens),(mat->rmap->n/bs),(((MPI_Datatype)0x4c000405 )),(0),(tag),(PetscObjectComm((PetscObject)mat))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1174,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1175 | ierr = PetscViewerFlowControlEndWorker(viewer,&message_count);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1175,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1176 | } |
1177 | ierr = PetscFree(crow_lens)((*PetscTrFree)((void*)(crow_lens),1177,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((crow_lens) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1177,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1178 | |
1179 | /* load up the local column indices. Include for all rows not just one for each block row since process 0 does not have the |
1180 | information needed to make it for each row from a block row. This does require more communication but still not more than |
1181 | the communication needed for the nonzero values */ |
1182 | nzmax = nz; /* space a largest processor needs */ |
1183 | ierr = MPI_Reduce(&nz,&nzmax,1,MPIU_INT((MPI_Datatype)0x4c000405),MPI_MAX(MPI_Op)(0x58000001),0,PetscObjectComm((PetscObject)mat));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1183,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1184 | ierr = PetscMalloc1(nzmax,&column_indices)PetscMallocA(1,PETSC_FALSE,1184,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(nzmax)*sizeof(**(&column_indices)),(&column_indices ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1184,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1185 | cnt = 0; |
1186 | for (i=0; i<a->mbs; i++) { |
1187 | pcnt = cnt; |
1188 | for (j=B->i[i]; j<B->i[i+1]; j++) { |
1189 | if ((col = garray[B->j[j]]) > cstart) break; |
1190 | for (l=0; l<bs; l++) { |
1191 | column_indices[cnt++] = bs*col+l; |
1192 | } |
1193 | } |
1194 | for (k=A->i[i]; k<A->i[i+1]; k++) { |
1195 | for (l=0; l<bs; l++) { |
1196 | column_indices[cnt++] = bs*(A->j[k] + cstart)+l; |
1197 | } |
1198 | } |
1199 | for (; j<B->i[i+1]; j++) { |
1200 | for (l=0; l<bs; l++) { |
1201 | column_indices[cnt++] = bs*garray[B->j[j]]+l; |
1202 | } |
1203 | } |
1204 | len = cnt - pcnt; |
1205 | for (k=1; k<bs; k++) { |
1206 | ierr = PetscArraycpy(&column_indices[cnt],&column_indices[pcnt],len)((sizeof(*(&column_indices[cnt])) != sizeof(*(&column_indices [pcnt]))) || PetscMemcpy(&column_indices[cnt],&column_indices [pcnt],(len)*sizeof(*(&column_indices[cnt]))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1206,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1207 | cnt += len; |
1208 | } |
1209 | } |
1210 | if (cnt != nz) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Internal PETSc error: cnt = %D nz = %D",cnt,nz)return PetscError(((MPI_Comm)0x44000001),1210,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,76,PETSC_ERROR_INITIAL,"Internal PETSc error: cnt = %D nz = %D" ,cnt,nz); |
1211 | |
1212 | /* store the columns to the file */ |
1213 | ierr = PetscViewerFlowControlStart(viewer,&message_count,&flowcontrolcount);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1213,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1214 | if (!rank) { |
1215 | MPI_Status status; |
1216 | ierr = PetscBinaryWrite(fd,column_indices,nz,PETSC_INT,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1216,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1217 | for (i=1; i<size; i++) { |
1218 | ierr = PetscViewerFlowControlStepMaster(viewer,i,&message_count,flowcontrolcount);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1218,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1219 | ierr = MPI_Recv(&cnt,1,MPIU_INT,i,tag,PetscObjectComm((PetscObject)mat),&status)((petsc_recv_ct++,0) || PetscMPITypeSize((1),(((MPI_Datatype) 0x4c000405)),(&petsc_recv_len)) || MPI_Recv((&cnt),(1 ),(((MPI_Datatype)0x4c000405)),(i),(tag),(PetscObjectComm((PetscObject )mat)),(&status)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1219,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1220 | ierr = MPI_Recv(column_indices,cnt,MPIU_INT,i,tag,PetscObjectComm((PetscObject)mat),&status)((petsc_recv_ct++,0) || PetscMPITypeSize((cnt),(((MPI_Datatype )0x4c000405)),(&petsc_recv_len)) || MPI_Recv((column_indices ),(cnt),(((MPI_Datatype)0x4c000405)),(i),(tag),(PetscObjectComm ((PetscObject)mat)),(&status)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1220,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1221 | ierr = PetscBinaryWrite(fd,column_indices,cnt,PETSC_INT,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1221,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1222 | } |
1223 | ierr = PetscViewerFlowControlEndMaster(viewer,&message_count);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1223,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1224 | } else { |
1225 | ierr = PetscViewerFlowControlStepWorker(viewer,rank,&message_count);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1225,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1226 | ierr = MPI_Send(&cnt,1,MPIU_INT,0,tag,PetscObjectComm((PetscObject)mat))((petsc_send_ct++,0) || PetscMPITypeSize((1),(((MPI_Datatype) 0x4c000405)),(&petsc_send_len)) || MPI_Send((&cnt),(1 ),(((MPI_Datatype)0x4c000405)),(0),(tag),(PetscObjectComm((PetscObject )mat))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1226,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1227 | ierr = MPI_Send(column_indices,cnt,MPIU_INT,0,tag,PetscObjectComm((PetscObject)mat))((petsc_send_ct++,0) || PetscMPITypeSize((cnt),(((MPI_Datatype )0x4c000405)),(&petsc_send_len)) || MPI_Send((column_indices ),(cnt),(((MPI_Datatype)0x4c000405)),(0),(tag),(PetscObjectComm ((PetscObject)mat))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1227,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1228 | ierr = PetscViewerFlowControlEndWorker(viewer,&message_count);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1228,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1229 | } |
1230 | ierr = PetscFree(column_indices)((*PetscTrFree)((void*)(column_indices),1230,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((column_indices) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1230,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1231 | |
1232 | /* load up the numerical values */ |
1233 | ierr = PetscMalloc1(nzmax,&column_values)PetscMallocA(1,PETSC_FALSE,1233,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(nzmax)*sizeof(**(&column_values)),(&column_values ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1233,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1234 | cnt = 0; |
1235 | for (i=0; i<a->mbs; i++) { |
1236 | rlen = bs*(B->i[i+1] - B->i[i] + A->i[i+1] - A->i[i]); |
1237 | for (j=B->i[i]; j<B->i[i+1]; j++) { |
1238 | if (garray[B->j[j]] > cstart) break; |
1239 | for (l=0; l<bs; l++) { |
1240 | for (ll=0; ll<bs; ll++) { |
1241 | column_values[cnt + l*rlen + ll] = B->a[bs2*j+l+bs*ll]; |
1242 | } |
1243 | } |
1244 | cnt += bs; |
1245 | } |
1246 | for (k=A->i[i]; k<A->i[i+1]; k++) { |
1247 | for (l=0; l<bs; l++) { |
1248 | for (ll=0; ll<bs; ll++) { |
1249 | column_values[cnt + l*rlen + ll] = A->a[bs2*k+l+bs*ll]; |
1250 | } |
1251 | } |
1252 | cnt += bs; |
1253 | } |
1254 | for (; j<B->i[i+1]; j++) { |
1255 | for (l=0; l<bs; l++) { |
1256 | for (ll=0; ll<bs; ll++) { |
1257 | column_values[cnt + l*rlen + ll] = B->a[bs2*j+l+bs*ll]; |
1258 | } |
1259 | } |
1260 | cnt += bs; |
1261 | } |
1262 | cnt += (bs-1)*rlen; |
1263 | } |
1264 | if (cnt != nz) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Internal PETSc error: cnt = %D nz = %D",cnt,nz)return PetscError(((MPI_Comm)0x44000001),1264,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,77,PETSC_ERROR_INITIAL,"Internal PETSc error: cnt = %D nz = %D" ,cnt,nz); |
1265 | |
1266 | /* store the column values to the file */ |
1267 | ierr = PetscViewerFlowControlStart(viewer,&message_count,&flowcontrolcount);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1267,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1268 | if (!rank) { |
1269 | MPI_Status status; |
1270 | ierr = PetscBinaryWrite(fd,column_values,nz,PETSC_SCALARPETSC_DOUBLE,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1270,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1271 | for (i=1; i<size; i++) { |
1272 | ierr = PetscViewerFlowControlStepMaster(viewer,i,&message_count,flowcontrolcount);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1272,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1273 | ierr = MPI_Recv(&cnt,1,MPIU_INT,i,tag,PetscObjectComm((PetscObject)mat),&status)((petsc_recv_ct++,0) || PetscMPITypeSize((1),(((MPI_Datatype) 0x4c000405)),(&petsc_recv_len)) || MPI_Recv((&cnt),(1 ),(((MPI_Datatype)0x4c000405)),(i),(tag),(PetscObjectComm((PetscObject )mat)),(&status)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1273,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1274 | ierr = MPI_Recv(column_values,cnt,MPIU_SCALAR,i,tag,PetscObjectComm((PetscObject)mat),&status)((petsc_recv_ct++,0) || PetscMPITypeSize((cnt),(((MPI_Datatype )0x4c00080b)),(&petsc_recv_len)) || MPI_Recv((column_values ),(cnt),(((MPI_Datatype)0x4c00080b)),(i),(tag),(PetscObjectComm ((PetscObject)mat)),(&status)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1274,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1275 | ierr = PetscBinaryWrite(fd,column_values,cnt,PETSC_SCALARPETSC_DOUBLE,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1275,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1276 | } |
1277 | ierr = PetscViewerFlowControlEndMaster(viewer,&message_count);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1277,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1278 | } else { |
1279 | ierr = PetscViewerFlowControlStepWorker(viewer,rank,&message_count);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1279,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1280 | ierr = MPI_Send(&nz,1,MPIU_INT,0,tag,PetscObjectComm((PetscObject)mat))((petsc_send_ct++,0) || PetscMPITypeSize((1),(((MPI_Datatype) 0x4c000405)),(&petsc_send_len)) || MPI_Send((&nz),(1) ,(((MPI_Datatype)0x4c000405)),(0),(tag),(PetscObjectComm((PetscObject )mat))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1280,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1281 | ierr = MPI_Send(column_values,nz,MPIU_SCALAR,0,tag,PetscObjectComm((PetscObject)mat))((petsc_send_ct++,0) || PetscMPITypeSize((nz),(((MPI_Datatype )0x4c00080b)),(&petsc_send_len)) || MPI_Send((column_values ),(nz),(((MPI_Datatype)0x4c00080b)),(0),(tag),(PetscObjectComm ((PetscObject)mat))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1281,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1282 | ierr = PetscViewerFlowControlEndWorker(viewer,&message_count);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1282,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1283 | } |
1284 | ierr = PetscFree(column_values)((*PetscTrFree)((void*)(column_values),1284,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((column_values) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1284,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1285 | |
1286 | ierr = PetscViewerBinaryGetInfoPointer(viewer,&file);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1286,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1287 | if (file) { |
1288 | fprintf(file,"-matload_block_size %d\n",(int)mat->rmap->bs); |
1289 | } |
1290 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1291 | } |
1292 | |
1293 | PetscErrorCode MatView_MPIBAIJ(Mat mat,PetscViewer viewer) |
1294 | { |
1295 | PetscErrorCode ierr; |
1296 | PetscBool iascii,isdraw,issocket,isbinary; |
1297 | |
1298 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1298; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1299 | ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII"ascii",&iascii);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1299,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1300 | ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW"draw",&isdraw);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1300,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1301 | ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERSOCKET"socket",&issocket);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1301,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1302 | ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY"binary",&isbinary);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1302,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1303 | if (iascii || isdraw || issocket) { |
1304 | ierr = MatView_MPIBAIJ_ASCIIorDraworSocket(mat,viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1304,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1305 | } else if (isbinary) { |
1306 | ierr = MatView_MPIBAIJ_Binary(mat,viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1306,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1307 | } |
1308 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1309 | } |
1310 | |
1311 | PetscErrorCode MatDestroy_MPIBAIJ(Mat mat) |
1312 | { |
1313 | Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data; |
1314 | PetscErrorCode ierr; |
1315 | |
1316 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1316; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1317 | #if defined(PETSC_USE_LOG1) |
1318 | PetscLogObjectState((PetscObject)mat,"Rows=%D,Cols=%D",mat->rmap->N,mat->cmap->N); |
1319 | #endif |
1320 | ierr = MatStashDestroy_Private(&mat->stash);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1320,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1321 | ierr = MatStashDestroy_Private(&mat->bstash);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1321,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1322 | ierr = MatDestroy(&baij->A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1322,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1323 | ierr = MatDestroy(&baij->B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1323,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1324 | #if defined(PETSC_USE_CTABLE1) |
1325 | ierr = PetscTableDestroy(&baij->colmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1325,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1326 | #else |
1327 | ierr = PetscFree(baij->colmap)((*PetscTrFree)((void*)(baij->colmap),1327,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((baij->colmap) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1327,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1328 | #endif |
1329 | ierr = PetscFree(baij->garray)((*PetscTrFree)((void*)(baij->garray),1329,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((baij->garray) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1329,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1330 | ierr = VecDestroy(&baij->lvec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1330,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1331 | ierr = VecScatterDestroy(&baij->Mvctx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1331,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1332 | ierr = PetscFree2(baij->rowvalues,baij->rowindices)PetscFreeA(2,1332,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,&(baij->rowvalues),&(baij->rowindices));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1332,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1333 | ierr = PetscFree(baij->barray)((*PetscTrFree)((void*)(baij->barray),1333,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((baij->barray) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1333,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1334 | ierr = PetscFree2(baij->hd,baij->ht)PetscFreeA(2,1334,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,&(baij->hd),&(baij->ht));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1334,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1335 | ierr = PetscFree(baij->rangebs)((*PetscTrFree)((void*)(baij->rangebs),1335,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((baij->rangebs) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1335,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1336 | ierr = PetscFree(mat->data)((*PetscTrFree)((void*)(mat->data),1336,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((mat->data) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1336,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1337 | |
1338 | ierr = PetscObjectChangeTypeName((PetscObject)mat,0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1338,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1339 | ierr = PetscObjectComposeFunction((PetscObject)mat,"MatStoreValues_C",NULL)PetscObjectComposeFunction_Private((PetscObject)mat,"MatStoreValues_C" ,(PetscVoidFunction)(((void*)0)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1339,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1340 | ierr = PetscObjectComposeFunction((PetscObject)mat,"MatRetrieveValues_C",NULL)PetscObjectComposeFunction_Private((PetscObject)mat,"MatRetrieveValues_C" ,(PetscVoidFunction)(((void*)0)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1340,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1341 | ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMPIBAIJSetPreallocation_C",NULL)PetscObjectComposeFunction_Private((PetscObject)mat,"MatMPIBAIJSetPreallocation_C" ,(PetscVoidFunction)(((void*)0)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1341,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1342 | ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMPIBAIJSetPreallocationCSR_C",NULL)PetscObjectComposeFunction_Private((PetscObject)mat,"MatMPIBAIJSetPreallocationCSR_C" ,(PetscVoidFunction)(((void*)0)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1342,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1343 | ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDiagonalScaleLocal_C",NULL)PetscObjectComposeFunction_Private((PetscObject)mat,"MatDiagonalScaleLocal_C" ,(PetscVoidFunction)(((void*)0)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1343,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1344 | ierr = PetscObjectComposeFunction((PetscObject)mat,"MatSetHashTableFactor_C",NULL)PetscObjectComposeFunction_Private((PetscObject)mat,"MatSetHashTableFactor_C" ,(PetscVoidFunction)(((void*)0)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1344,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1345 | ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpibaij_mpisbaij_C",NULL)PetscObjectComposeFunction_Private((PetscObject)mat,"MatConvert_mpibaij_mpisbaij_C" ,(PetscVoidFunction)(((void*)0)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1345,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1346 | ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpibaij_mpibstrm_C",NULL)PetscObjectComposeFunction_Private((PetscObject)mat,"MatConvert_mpibaij_mpibstrm_C" ,(PetscVoidFunction)(((void*)0)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1346,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1347 | #if defined(PETSC_HAVE_HYPRE) |
1348 | ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpibaij_hypre_C",NULL)PetscObjectComposeFunction_Private((PetscObject)mat,"MatConvert_mpibaij_hypre_C" ,(PetscVoidFunction)(((void*)0)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1348,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1349 | #endif |
1350 | ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpibaij_is_C",NULL)PetscObjectComposeFunction_Private((PetscObject)mat,"MatConvert_mpibaij_is_C" ,(PetscVoidFunction)(((void*)0)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1350,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1351 | ierr = PetscObjectComposeFunction((PetscObject)mat,"MatPtAP_is_mpibaij_C",NULL)PetscObjectComposeFunction_Private((PetscObject)mat,"MatPtAP_is_mpibaij_C" ,(PetscVoidFunction)(((void*)0)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1351,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1352 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1353 | } |
1354 | |
1355 | PetscErrorCode MatMult_MPIBAIJ(Mat A,Vec xx,Vec yy) |
1356 | { |
1357 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data; |
1358 | PetscErrorCode ierr; |
1359 | PetscInt nt; |
1360 | |
1361 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1361; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1362 | ierr = VecGetLocalSize(xx,&nt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1362,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1363 | if (nt != A->cmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Incompatible partition of A and xx")return PetscError(((MPI_Comm)0x44000001),1363,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,60,PETSC_ERROR_INITIAL,"Incompatible partition of A and xx"); |
1364 | ierr = VecGetLocalSize(yy,&nt);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1364,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1365 | if (nt != A->rmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Incompatible parition of A and yy")return PetscError(((MPI_Comm)0x44000001),1365,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,60,PETSC_ERROR_INITIAL,"Incompatible parition of A and yy"); |
1366 | ierr = VecScatterBegin(a->Mvctx,xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1366,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1367 | ierr = (*a->A->ops->mult)(a->A,xx,yy);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1367,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1368 | ierr = VecScatterEnd(a->Mvctx,xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1368,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1369 | ierr = (*a->B->ops->multadd)(a->B,a->lvec,yy,yy);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1369,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1370 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1371 | } |
1372 | |
1373 | PetscErrorCode MatMultAdd_MPIBAIJ(Mat A,Vec xx,Vec yy,Vec zz) |
1374 | { |
1375 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data; |
1376 | PetscErrorCode ierr; |
1377 | |
1378 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1378; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1379 | ierr = VecScatterBegin(a->Mvctx,xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1379,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1380 | ierr = (*a->A->ops->multadd)(a->A,xx,yy,zz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1380,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1381 | ierr = VecScatterEnd(a->Mvctx,xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1381,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1382 | ierr = (*a->B->ops->multadd)(a->B,a->lvec,zz,zz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1382,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1383 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1384 | } |
1385 | |
1386 | PetscErrorCode MatMultTranspose_MPIBAIJ(Mat A,Vec xx,Vec yy) |
1387 | { |
1388 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data; |
1389 | PetscErrorCode ierr; |
1390 | |
1391 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1391; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1392 | /* do nondiagonal part */ |
1393 | ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1393,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1394 | /* do local part */ |
1395 | ierr = (*a->A->ops->multtranspose)(a->A,xx,yy);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1395,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1396 | /* add partial results together */ |
1397 | ierr = VecScatterBegin(a->Mvctx,a->lvec,yy,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1397,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1398 | ierr = VecScatterEnd(a->Mvctx,a->lvec,yy,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1398,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1399 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1400 | } |
1401 | |
1402 | PetscErrorCode MatMultTransposeAdd_MPIBAIJ(Mat A,Vec xx,Vec yy,Vec zz) |
1403 | { |
1404 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data; |
1405 | PetscErrorCode ierr; |
1406 | |
1407 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1407; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1408 | /* do nondiagonal part */ |
1409 | ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1409,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1410 | /* do local part */ |
1411 | ierr = (*a->A->ops->multtransposeadd)(a->A,xx,yy,zz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1411,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1412 | /* add partial results together */ |
1413 | ierr = VecScatterBegin(a->Mvctx,a->lvec,zz,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1413,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1414 | ierr = VecScatterEnd(a->Mvctx,a->lvec,zz,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1414,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1415 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1416 | } |
1417 | |
1418 | /* |
1419 | This only works correctly for square matrices where the subblock A->A is the |
1420 | diagonal block |
1421 | */ |
1422 | PetscErrorCode MatGetDiagonal_MPIBAIJ(Mat A,Vec v) |
1423 | { |
1424 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data; |
1425 | PetscErrorCode ierr; |
1426 | |
1427 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1427; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1428 | if (A->rmap->N != A->cmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Supports only square matrix where A->A is diag block")return PetscError(((MPI_Comm)0x44000001),1428,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,56,PETSC_ERROR_INITIAL,"Supports only square matrix where A->A is diag block" ); |
1429 | ierr = MatGetDiagonal(a->A,v);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1429,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1430 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1431 | } |
1432 | |
1433 | PetscErrorCode MatScale_MPIBAIJ(Mat A,PetscScalar aa) |
1434 | { |
1435 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data; |
1436 | PetscErrorCode ierr; |
1437 | |
1438 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1438; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1439 | ierr = MatScale(a->A,aa);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1439,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1440 | ierr = MatScale(a->B,aa);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1440,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1441 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1442 | } |
1443 | |
1444 | PetscErrorCode MatGetRow_MPIBAIJ(Mat matin,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v) |
1445 | { |
1446 | Mat_MPIBAIJ *mat = (Mat_MPIBAIJ*)matin->data; |
1447 | PetscScalar *vworkA,*vworkB,**pvA,**pvB,*v_p; |
1448 | PetscErrorCode ierr; |
1449 | PetscInt bs = matin->rmap->bs,bs2 = mat->bs2,i,*cworkA,*cworkB,**pcA,**pcB; |
1450 | PetscInt nztot,nzA,nzB,lrow,brstart = matin->rmap->rstart,brend = matin->rmap->rend; |
1451 | PetscInt *cmap,*idx_p,cstart = mat->cstartbs; |
1452 | |
1453 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1453; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1454 | if (row < brstart || row >= brend) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only local rows")return PetscError(((MPI_Comm)0x44000001),1454,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,56,PETSC_ERROR_INITIAL,"Only local rows"); |
1455 | if (mat->getrowactive) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Already active")return PetscError(((MPI_Comm)0x44000001),1455,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,73,PETSC_ERROR_INITIAL,"Already active"); |
1456 | mat->getrowactive = PETSC_TRUE; |
1457 | |
1458 | if (!mat->rowvalues && (idx || v)) { |
1459 | /* |
1460 | allocate enough space to hold information from the longest row. |
1461 | */ |
1462 | Mat_SeqBAIJ *Aa = (Mat_SeqBAIJ*)mat->A->data,*Ba = (Mat_SeqBAIJ*)mat->B->data; |
1463 | PetscInt max = 1,mbs = mat->mbs,tmp; |
1464 | for (i=0; i<mbs; i++) { |
1465 | tmp = Aa->i[i+1] - Aa->i[i] + Ba->i[i+1] - Ba->i[i]; |
1466 | if (max < tmp) max = tmp; |
1467 | } |
1468 | ierr = PetscMalloc2(max*bs2,&mat->rowvalues,max*bs2,&mat->rowindices)PetscMallocA(2,PETSC_FALSE,1468,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(max*bs2)*sizeof(**(&mat->rowvalues)),(&mat ->rowvalues),(size_t)(max*bs2)*sizeof(**(&mat->rowindices )),(&mat->rowindices));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1468,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1469 | } |
1470 | lrow = row - brstart; |
1471 | |
1472 | pvA = &vworkA; pcA = &cworkA; pvB = &vworkB; pcB = &cworkB; |
1473 | if (!v) {pvA = 0; pvB = 0;} |
1474 | if (!idx) {pcA = 0; if (!v) pcB = 0;} |
1475 | ierr = (*mat->A->ops->getrow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1475,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1476 | ierr = (*mat->B->ops->getrow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1476,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1477 | nztot = nzA + nzB; |
1478 | |
1479 | cmap = mat->garray; |
1480 | if (v || idx) { |
1481 | if (nztot) { |
1482 | /* Sort by increasing column numbers, assuming A and B already sorted */ |
1483 | PetscInt imark = -1; |
1484 | if (v) { |
1485 | *v = v_p = mat->rowvalues; |
1486 | for (i=0; i<nzB; i++) { |
1487 | if (cmap[cworkB[i]/bs] < cstart) v_p[i] = vworkB[i]; |
1488 | else break; |
1489 | } |
1490 | imark = i; |
1491 | for (i=0; i<nzA; i++) v_p[imark+i] = vworkA[i]; |
1492 | for (i=imark; i<nzB; i++) v_p[nzA+i] = vworkB[i]; |
1493 | } |
1494 | if (idx) { |
1495 | *idx = idx_p = mat->rowindices; |
1496 | if (imark > -1) { |
1497 | for (i=0; i<imark; i++) { |
1498 | idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs; |
1499 | } |
1500 | } else { |
1501 | for (i=0; i<nzB; i++) { |
1502 | if (cmap[cworkB[i]/bs] < cstart) idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs; |
1503 | else break; |
1504 | } |
1505 | imark = i; |
1506 | } |
1507 | for (i=0; i<nzA; i++) idx_p[imark+i] = cstart*bs + cworkA[i]; |
1508 | for (i=imark; i<nzB; i++) idx_p[nzA+i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ; |
1509 | } |
1510 | } else { |
1511 | if (idx) *idx = 0; |
1512 | if (v) *v = 0; |
1513 | } |
1514 | } |
1515 | *nz = nztot; |
1516 | ierr = (*mat->A->ops->restorerow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1516,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1517 | ierr = (*mat->B->ops->restorerow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1517,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1518 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1519 | } |
1520 | |
1521 | PetscErrorCode MatRestoreRow_MPIBAIJ(Mat mat,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v) |
1522 | { |
1523 | Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data; |
1524 | |
1525 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1525; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1526 | if (!baij->getrowactive) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"MatGetRow not called")return PetscError(((MPI_Comm)0x44000001),1526,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,73,PETSC_ERROR_INITIAL,"MatGetRow not called"); |
1527 | baij->getrowactive = PETSC_FALSE; |
1528 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1529 | } |
1530 | |
1531 | PetscErrorCode MatZeroEntries_MPIBAIJ(Mat A) |
1532 | { |
1533 | Mat_MPIBAIJ *l = (Mat_MPIBAIJ*)A->data; |
1534 | PetscErrorCode ierr; |
1535 | |
1536 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1536; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1537 | ierr = MatZeroEntries(l->A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1537,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1538 | ierr = MatZeroEntries(l->B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1538,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1539 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1540 | } |
1541 | |
1542 | PetscErrorCode MatGetInfo_MPIBAIJ(Mat matin,MatInfoType flag,MatInfo *info) |
1543 | { |
1544 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)matin->data; |
1545 | Mat A = a->A,B = a->B; |
1546 | PetscErrorCode ierr; |
1547 | PetscReal isend[5],irecv[5]; |
1548 | |
1549 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1549; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1550 | info->block_size = (PetscReal)matin->rmap->bs; |
1551 | |
1552 | ierr = MatGetInfo(A,MAT_LOCAL,info);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1552,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1553 | |
1554 | isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded; |
1555 | isend[3] = info->memory; isend[4] = info->mallocs; |
1556 | |
1557 | ierr = MatGetInfo(B,MAT_LOCAL,info);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1557,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1558 | |
1559 | isend[0] += info->nz_used; isend[1] += info->nz_allocated; isend[2] += info->nz_unneeded; |
1560 | isend[3] += info->memory; isend[4] += info->mallocs; |
1561 | |
1562 | if (flag == MAT_LOCAL) { |
1563 | info->nz_used = isend[0]; |
1564 | info->nz_allocated = isend[1]; |
1565 | info->nz_unneeded = isend[2]; |
1566 | info->memory = isend[3]; |
1567 | info->mallocs = isend[4]; |
1568 | } else if (flag == MAT_GLOBAL_MAX) { |
1569 | ierr = MPIU_Allreduce(isend,irecv,5,MPIU_REAL,MPIU_MAX,PetscObjectComm((PetscObject)matin))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject)matin ),5,1569,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm ((PetscObject)matin))),0) || MPI_Allreduce((isend),(irecv),(5 ),(((MPI_Datatype)0x4c00080b)),((MPI_Op)(0x58000001)),(PetscObjectComm ((PetscObject)matin)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1569,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1570 | |
1571 | info->nz_used = irecv[0]; |
1572 | info->nz_allocated = irecv[1]; |
1573 | info->nz_unneeded = irecv[2]; |
1574 | info->memory = irecv[3]; |
1575 | info->mallocs = irecv[4]; |
1576 | } else if (flag == MAT_GLOBAL_SUM) { |
1577 | ierr = MPIU_Allreduce(isend,irecv,5,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)matin))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject)matin ),5,1577,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm ((PetscObject)matin))),0) || MPI_Allreduce((isend),(irecv),(5 ),(((MPI_Datatype)0x4c00080b)),((MPI_Op)(0x58000003)),(PetscObjectComm ((PetscObject)matin)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1577,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1578 | |
1579 | info->nz_used = irecv[0]; |
1580 | info->nz_allocated = irecv[1]; |
1581 | info->nz_unneeded = irecv[2]; |
1582 | info->memory = irecv[3]; |
1583 | info->mallocs = irecv[4]; |
1584 | } else SETERRQ1(PetscObjectComm((PetscObject)matin),PETSC_ERR_ARG_WRONG,"Unknown MatInfoType argument %d",(int)flag)return PetscError(PetscObjectComm((PetscObject)matin),1584,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,62,PETSC_ERROR_INITIAL,"Unknown MatInfoType argument %d",(int )flag); |
1585 | info->fill_ratio_given = 0; /* no parallel LU/ILU/Cholesky */ |
1586 | info->fill_ratio_needed = 0; |
1587 | info->factor_mallocs = 0; |
1588 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1589 | } |
1590 | |
1591 | PetscErrorCode MatSetOption_MPIBAIJ(Mat A,MatOption op,PetscBool flg) |
1592 | { |
1593 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data; |
1594 | PetscErrorCode ierr; |
1595 | |
1596 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1596; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1597 | switch (op) { |
1598 | case MAT_NEW_NONZERO_LOCATIONS: |
1599 | case MAT_NEW_NONZERO_ALLOCATION_ERR: |
1600 | case MAT_UNUSED_NONZERO_LOCATION_ERR: |
1601 | case MAT_KEEP_NONZERO_PATTERN: |
1602 | case MAT_NEW_NONZERO_LOCATION_ERR: |
1603 | MatCheckPreallocated(A,1)do { if (__builtin_expect(!!(!(A)->preallocated),0)) return PetscError(((MPI_Comm)0x44000001),1603,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,73,PETSC_ERROR_INITIAL,"Must call MatXXXSetPreallocation() or MatSetUp() on argument %D \"%s\" before %s()" ,(1),"A",__func__); } while (0); |
1604 | ierr = MatSetOption(a->A,op,flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1604,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1605 | ierr = MatSetOption(a->B,op,flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1605,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1606 | break; |
1607 | case MAT_ROW_ORIENTED: |
1608 | MatCheckPreallocated(A,1)do { if (__builtin_expect(!!(!(A)->preallocated),0)) return PetscError(((MPI_Comm)0x44000001),1608,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,73,PETSC_ERROR_INITIAL,"Must call MatXXXSetPreallocation() or MatSetUp() on argument %D \"%s\" before %s()" ,(1),"A",__func__); } while (0); |
1609 | a->roworiented = flg; |
1610 | |
1611 | ierr = MatSetOption(a->A,op,flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1611,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1612 | ierr = MatSetOption(a->B,op,flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1612,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1613 | break; |
1614 | case MAT_NEW_DIAGONALS: |
1615 | case MAT_SORTED_FULL: |
1616 | ierr = PetscInfo1(A,"Option %s ignored\n",MatOptions[op])PetscInfo_Private(__func__,A,"Option %s ignored\n",MatOptions [op]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1616,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1617 | break; |
1618 | case MAT_IGNORE_OFF_PROC_ENTRIES: |
1619 | a->donotstash = flg; |
1620 | break; |
1621 | case MAT_USE_HASH_TABLE: |
1622 | a->ht_flag = flg; |
1623 | a->ht_fact = 1.39; |
1624 | break; |
1625 | case MAT_SYMMETRIC: |
1626 | case MAT_STRUCTURALLY_SYMMETRIC: |
1627 | case MAT_HERMITIAN: |
1628 | case MAT_SUBMAT_SINGLEIS: |
1629 | case MAT_SYMMETRY_ETERNAL: |
1630 | MatCheckPreallocated(A,1)do { if (__builtin_expect(!!(!(A)->preallocated),0)) return PetscError(((MPI_Comm)0x44000001),1630,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,73,PETSC_ERROR_INITIAL,"Must call MatXXXSetPreallocation() or MatSetUp() on argument %D \"%s\" before %s()" ,(1),"A",__func__); } while (0); |
1631 | ierr = MatSetOption(a->A,op,flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1631,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1632 | break; |
1633 | default: |
1634 | SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"unknown option %d",op)return PetscError(PetscObjectComm((PetscObject)A),1634,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,56,PETSC_ERROR_INITIAL,"unknown option %d",op); |
1635 | } |
1636 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1637 | } |
1638 | |
1639 | PetscErrorCode MatTranspose_MPIBAIJ(Mat A,MatReuse reuse,Mat *matout) |
1640 | { |
1641 | Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)A->data; |
1642 | Mat_SeqBAIJ *Aloc; |
1643 | Mat B; |
1644 | PetscErrorCode ierr; |
1645 | PetscInt M =A->rmap->N,N=A->cmap->N,*ai,*aj,i,*rvals,j,k,col; |
1646 | PetscInt bs=A->rmap->bs,mbs=baij->mbs; |
1647 | MatScalar *a; |
1648 | |
1649 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1649; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1650 | if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) { |
1651 | ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1651,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1652 | ierr = MatSetSizes(B,A->cmap->n,A->rmap->n,N,M);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1652,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1653 | ierr = MatSetType(B,((PetscObject)A)->type_name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1653,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1654 | /* Do not know preallocation information, but must set block size */ |
1655 | ierr = MatMPIBAIJSetPreallocation(B,A->rmap->bs,PETSC_DECIDE-1,NULL((void*)0),PETSC_DECIDE-1,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1655,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1656 | } else { |
1657 | B = *matout; |
1658 | } |
1659 | |
1660 | /* copy over the A part */ |
1661 | Aloc = (Mat_SeqBAIJ*)baij->A->data; |
1662 | ai = Aloc->i; aj = Aloc->j; a = Aloc->a; |
1663 | ierr = PetscMalloc1(bs,&rvals)PetscMallocA(1,PETSC_FALSE,1663,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(bs)*sizeof(**(&rvals)),(&rvals));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1663,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1664 | |
1665 | for (i=0; i<mbs; i++) { |
1666 | rvals[0] = bs*(baij->rstartbs + i); |
1667 | for (j=1; j<bs; j++) rvals[j] = rvals[j-1] + 1; |
1668 | for (j=ai[i]; j<ai[i+1]; j++) { |
1669 | col = (baij->cstartbs+aj[j])*bs; |
1670 | for (k=0; k<bs; k++) { |
1671 | ierr = MatSetValues_MPIBAIJ(B,1,&col,bs,rvals,a,INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1671,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1672 | |
1673 | col++; a += bs; |
1674 | } |
1675 | } |
1676 | } |
1677 | /* copy over the B part */ |
1678 | Aloc = (Mat_SeqBAIJ*)baij->B->data; |
1679 | ai = Aloc->i; aj = Aloc->j; a = Aloc->a; |
1680 | for (i=0; i<mbs; i++) { |
1681 | rvals[0] = bs*(baij->rstartbs + i); |
1682 | for (j=1; j<bs; j++) rvals[j] = rvals[j-1] + 1; |
1683 | for (j=ai[i]; j<ai[i+1]; j++) { |
1684 | col = baij->garray[aj[j]]*bs; |
1685 | for (k=0; k<bs; k++) { |
1686 | ierr = MatSetValues_MPIBAIJ(B,1,&col,bs,rvals,a,INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1686,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1687 | col++; |
1688 | a += bs; |
1689 | } |
1690 | } |
1691 | } |
1692 | ierr = PetscFree(rvals)((*PetscTrFree)((void*)(rvals),1692,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((rvals) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1692,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1693 | ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1693,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1694 | ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1694,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1695 | |
1696 | if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) *matout = B; |
1697 | else { |
1698 | ierr = MatHeaderMerge(A,&B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1698,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1699 | } |
1700 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1701 | } |
1702 | |
1703 | PetscErrorCode MatDiagonalScale_MPIBAIJ(Mat mat,Vec ll,Vec rr) |
1704 | { |
1705 | Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data; |
1706 | Mat a = baij->A,b = baij->B; |
1707 | PetscErrorCode ierr; |
1708 | PetscInt s1,s2,s3; |
1709 | |
1710 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1710; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1711 | ierr = MatGetLocalSize(mat,&s2,&s3);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1711,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1712 | if (rr) { |
1713 | ierr = VecGetLocalSize(rr,&s1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1713,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1714 | if (s1!=s3) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"right vector non-conforming local size")return PetscError(((MPI_Comm)0x44000001),1714,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,60,PETSC_ERROR_INITIAL,"right vector non-conforming local size" ); |
1715 | /* Overlap communication with computation. */ |
1716 | ierr = VecScatterBegin(baij->Mvctx,rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1716,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1717 | } |
1718 | if (ll) { |
1719 | ierr = VecGetLocalSize(ll,&s1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1719,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1720 | if (s1!=s2) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"left vector non-conforming local size")return PetscError(((MPI_Comm)0x44000001),1720,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,60,PETSC_ERROR_INITIAL,"left vector non-conforming local size" ); |
1721 | ierr = (*b->ops->diagonalscale)(b,ll,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1721,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1722 | } |
1723 | /* scale the diagonal block */ |
1724 | ierr = (*a->ops->diagonalscale)(a,ll,rr);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1724,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1725 | |
1726 | if (rr) { |
1727 | /* Do a scatter end and then right scale the off-diagonal block */ |
1728 | ierr = VecScatterEnd(baij->Mvctx,rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1728,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1729 | ierr = (*b->ops->diagonalscale)(b,NULL((void*)0),baij->lvec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1729,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1730 | } |
1731 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1732 | } |
1733 | |
1734 | PetscErrorCode MatZeroRows_MPIBAIJ(Mat A,PetscInt N,const PetscInt rows[],PetscScalar diag,Vec x,Vec b) |
1735 | { |
1736 | Mat_MPIBAIJ *l = (Mat_MPIBAIJ *) A->data; |
1737 | PetscInt *lrows; |
1738 | PetscInt r, len; |
1739 | PetscBool cong; |
1740 | PetscErrorCode ierr; |
1741 | |
1742 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1742; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1743 | /* get locally owned rows */ |
1744 | ierr = MatZeroRowsMapLocal_Private(A,N,rows,&len,&lrows);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1744,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1745 | /* fix right hand side if needed */ |
1746 | if (x && b) { |
1747 | const PetscScalar *xx; |
1748 | PetscScalar *bb; |
1749 | |
1750 | ierr = VecGetArrayRead(x,&xx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1750,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1751 | ierr = VecGetArray(b,&bb);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1751,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1752 | for (r = 0; r < len; ++r) bb[lrows[r]] = diag*xx[lrows[r]]; |
1753 | ierr = VecRestoreArrayRead(x,&xx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1753,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1754 | ierr = VecRestoreArray(b,&bb);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1754,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1755 | } |
1756 | |
1757 | /* actually zap the local rows */ |
1758 | /* |
1759 | Zero the required rows. If the "diagonal block" of the matrix |
1760 | is square and the user wishes to set the diagonal we use separate |
1761 | code so that MatSetValues() is not called for each diagonal allocating |
1762 | new memory, thus calling lots of mallocs and slowing things down. |
1763 | |
1764 | */ |
1765 | /* must zero l->B before l->A because the (diag) case below may put values into l->B*/ |
1766 | ierr = MatZeroRows_SeqBAIJ(l->B,len,lrows,0.0,NULL((void*)0),NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1766,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1767 | ierr = MatHasCongruentLayouts(A,&cong);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1767,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1768 | if ((diag != 0.0) && cong) { |
1769 | ierr = MatZeroRows_SeqBAIJ(l->A,len,lrows,diag,NULL((void*)0),NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1769,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1770 | } else if (diag != 0.0) { |
1771 | ierr = MatZeroRows_SeqBAIJ(l->A,len,lrows,0.0,0,0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1771,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1772 | if (((Mat_SeqBAIJ*)l->A->data)->nonew) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MatZeroRows() on rectangular matrices cannot be used with the Mat options \n\return PetscError(((MPI_Comm)0x44000001),1773,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,56,PETSC_ERROR_INITIAL,"MatZeroRows() on rectangular matrices cannot be used with the Mat options \n MAT_NEW_NONZERO_LOCATIONS,MAT_NEW_NONZERO_LOCATION_ERR,MAT_NEW_NONZERO_ALLOCATION_ERR" ) |
1773 | MAT_NEW_NONZERO_LOCATIONS,MAT_NEW_NONZERO_LOCATION_ERR,MAT_NEW_NONZERO_ALLOCATION_ERR")return PetscError(((MPI_Comm)0x44000001),1773,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,56,PETSC_ERROR_INITIAL,"MatZeroRows() on rectangular matrices cannot be used with the Mat options \n MAT_NEW_NONZERO_LOCATIONS,MAT_NEW_NONZERO_LOCATION_ERR,MAT_NEW_NONZERO_ALLOCATION_ERR" ); |
1774 | for (r = 0; r < len; ++r) { |
1775 | const PetscInt row = lrows[r] + A->rmap->rstart; |
1776 | ierr = MatSetValues(A,1,&row,1,&row,&diag,INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1776,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1777 | } |
1778 | ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1778,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1779 | ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1779,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1780 | } else { |
1781 | ierr = MatZeroRows_SeqBAIJ(l->A,len,lrows,0.0,NULL((void*)0),NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1781,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1782 | } |
1783 | ierr = PetscFree(lrows)((*PetscTrFree)((void*)(lrows),1783,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((lrows) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1783,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1784 | |
1785 | /* only change matrix nonzero state if pattern was allowed to be changed */ |
1786 | if (!((Mat_SeqBAIJ*)(l->A->data))->keepnonzeropattern) { |
1787 | PetscObjectState state = l->A->nonzerostate + l->B->nonzerostate; |
1788 | ierr = MPIU_Allreduce(&state,&A->nonzerostate,1,MPIU_INT64,MPI_SUM,PetscObjectComm((PetscObject)A))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject)A),1 ,1788,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm ((PetscObject)A))),0) || MPI_Allreduce((&state),(&A-> nonzerostate),(1),(((MPI_Datatype)0x4c00083a)),((MPI_Op)(0x58000003 )),(PetscObjectComm((PetscObject)A)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1788,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1789 | } |
1790 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1791 | } |
1792 | |
1793 | PetscErrorCode MatZeroRowsColumns_MPIBAIJ(Mat A,PetscInt N,const PetscInt rows[],PetscScalar diag,Vec x,Vec b) |
1794 | { |
1795 | Mat_MPIBAIJ *l = (Mat_MPIBAIJ*)A->data; |
1796 | PetscErrorCode ierr; |
1797 | PetscMPIInt n = A->rmap->n; |
1798 | PetscInt i,j,k,r,p = 0,len = 0,row,col,count; |
1799 | PetscInt *lrows,*owners = A->rmap->range; |
1800 | PetscSFNode *rrows; |
1801 | PetscSF sf; |
1802 | const PetscScalar *xx; |
1803 | PetscScalar *bb,*mask; |
1804 | Vec xmask,lmask; |
1805 | Mat_SeqBAIJ *baij = (Mat_SeqBAIJ*)l->B->data; |
1806 | PetscInt bs = A->rmap->bs, bs2 = baij->bs2; |
1807 | PetscScalar *aa; |
1808 | |
1809 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1809; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1810 | /* Create SF where leaves are input rows and roots are owned rows */ |
1811 | ierr = PetscMalloc1(n, &lrows)PetscMallocA(1,PETSC_FALSE,1811,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(n)*sizeof(**(&lrows)),(&lrows));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1811,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1812 | for (r = 0; r < n; ++r) lrows[r] = -1; |
1813 | ierr = PetscMalloc1(N, &rrows)PetscMallocA(1,PETSC_FALSE,1813,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(N)*sizeof(**(&rrows)),(&rrows));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1813,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1814 | for (r = 0; r < N; ++r) { |
1815 | const PetscInt idx = rows[r]; |
1816 | if (idx < 0 || A->rmap->N <= idx) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row %D out of range [0,%D)",idx,A->rmap->N)return PetscError(((MPI_Comm)0x44000001),1816,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Row %D out of range [0,%D)",idx,A-> rmap->N); |
1817 | if (idx < owners[p] || owners[p+1] <= idx) { /* short-circuit the search if the last p owns this row too */ |
1818 | ierr = PetscLayoutFindOwner(A->rmap,idx,&p);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1818,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1819 | } |
1820 | rrows[r].rank = p; |
1821 | rrows[r].index = rows[r] - owners[p]; |
1822 | } |
1823 | ierr = PetscSFCreate(PetscObjectComm((PetscObject) A), &sf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1823,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1824 | ierr = PetscSFSetGraph(sf, n, N, NULL((void*)0), PETSC_OWN_POINTER, rrows, PETSC_OWN_POINTER);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1824,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1825 | /* Collect flags for rows to be zeroed */ |
1826 | ierr = PetscSFReduceBegin(sf, MPIU_INT((MPI_Datatype)0x4c000405), (PetscInt *) rows, lrows, MPI_LOR(MPI_Op)(0x58000007));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1826,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1827 | ierr = PetscSFReduceEnd(sf, MPIU_INT((MPI_Datatype)0x4c000405), (PetscInt *) rows, lrows, MPI_LOR(MPI_Op)(0x58000007));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1827,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1828 | ierr = PetscSFDestroy(&sf);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1828,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1829 | /* Compress and put in row numbers */ |
1830 | for (r = 0; r < n; ++r) if (lrows[r] >= 0) lrows[len++] = r; |
1831 | /* zero diagonal part of matrix */ |
1832 | ierr = MatZeroRowsColumns(l->A,len,lrows,diag,x,b);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1832,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1833 | /* handle off diagonal part of matrix */ |
1834 | ierr = MatCreateVecs(A,&xmask,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1834,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1835 | ierr = VecDuplicate(l->lvec,&lmask);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1835,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1836 | ierr = VecGetArray(xmask,&bb);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1836,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1837 | for (i=0; i<len; i++) bb[lrows[i]] = 1; |
1838 | ierr = VecRestoreArray(xmask,&bb);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1838,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1839 | ierr = VecScatterBegin(l->Mvctx,xmask,lmask,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1839,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1840 | ierr = VecScatterEnd(l->Mvctx,xmask,lmask,ADD_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1840,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1841 | ierr = VecDestroy(&xmask);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1841,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1842 | if (x) { |
1843 | ierr = VecScatterBegin(l->Mvctx,x,l->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1843,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1844 | ierr = VecScatterEnd(l->Mvctx,x,l->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1844,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1845 | ierr = VecGetArrayRead(l->lvec,&xx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1845,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1846 | ierr = VecGetArray(b,&bb);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1846,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1847 | } |
1848 | ierr = VecGetArray(lmask,&mask);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1848,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1849 | /* remove zeroed rows of off diagonal matrix */ |
1850 | for (i = 0; i < len; ++i) { |
1851 | row = lrows[i]; |
1852 | count = (baij->i[row/bs +1] - baij->i[row/bs])*bs; |
1853 | aa = ((MatScalar*)(baij->a)) + baij->i[row/bs]*bs2 + (row%bs); |
1854 | for (k = 0; k < count; ++k) { |
1855 | aa[0] = 0.0; |
1856 | aa += bs; |
1857 | } |
1858 | } |
1859 | /* loop over all elements of off process part of matrix zeroing removed columns*/ |
1860 | for (i = 0; i < l->B->rmap->N; ++i) { |
1861 | row = i/bs; |
1862 | for (j = baij->i[row]; j < baij->i[row+1]; ++j) { |
1863 | for (k = 0; k < bs; ++k) { |
1864 | col = bs*baij->j[j] + k; |
1865 | if (PetscAbsScalar(mask[col])fabs(mask[col])) { |
1866 | aa = ((MatScalar*)(baij->a)) + j*bs2 + (i%bs) + bs*k; |
1867 | if (x) bb[i] -= aa[0]*xx[col]; |
1868 | aa[0] = 0.0; |
1869 | } |
1870 | } |
1871 | } |
1872 | } |
1873 | if (x) { |
1874 | ierr = VecRestoreArray(b,&bb);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1874,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1875 | ierr = VecRestoreArrayRead(l->lvec,&xx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1875,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1876 | } |
1877 | ierr = VecRestoreArray(lmask,&mask);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1877,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1878 | ierr = VecDestroy(&lmask);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1878,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1879 | ierr = PetscFree(lrows)((*PetscTrFree)((void*)(lrows),1879,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((lrows) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1879,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1880 | |
1881 | /* only change matrix nonzero state if pattern was allowed to be changed */ |
1882 | if (!((Mat_SeqBAIJ*)(l->A->data))->keepnonzeropattern) { |
1883 | PetscObjectState state = l->A->nonzerostate + l->B->nonzerostate; |
1884 | ierr = MPIU_Allreduce(&state,&A->nonzerostate,1,MPIU_INT64,MPI_SUM,PetscObjectComm((PetscObject)A))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject)A),1 ,1884,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm ((PetscObject)A))),0) || MPI_Allreduce((&state),(&A-> nonzerostate),(1),(((MPI_Datatype)0x4c00083a)),((MPI_Op)(0x58000003 )),(PetscObjectComm((PetscObject)A)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1884,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1885 | } |
1886 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1887 | } |
1888 | |
1889 | PetscErrorCode MatSetUnfactored_MPIBAIJ(Mat A) |
1890 | { |
1891 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data; |
1892 | PetscErrorCode ierr; |
1893 | |
1894 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1894; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1895 | ierr = MatSetUnfactored(a->A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1895,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1896 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1897 | } |
1898 | |
1899 | static PetscErrorCode MatDuplicate_MPIBAIJ(Mat,MatDuplicateOption,Mat*); |
1900 | |
1901 | PetscErrorCode MatEqual_MPIBAIJ(Mat A,Mat B,PetscBool *flag) |
1902 | { |
1903 | Mat_MPIBAIJ *matB = (Mat_MPIBAIJ*)B->data,*matA = (Mat_MPIBAIJ*)A->data; |
1904 | Mat a,b,c,d; |
1905 | PetscBool flg; |
1906 | PetscErrorCode ierr; |
1907 | |
1908 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1908; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1909 | a = matA->A; b = matA->B; |
1910 | c = matB->A; d = matB->B; |
1911 | |
1912 | ierr = MatEqual(a,c,&flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1912,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1913 | if (flg) { |
1914 | ierr = MatEqual(b,d,&flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1914,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1915 | } |
1916 | ierr = MPIU_Allreduce(&flg,flag,1,MPIU_BOOL,MPI_LAND,PetscObjectComm((PetscObject)A))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject)A),1 ,1916,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm ((PetscObject)A))),0) || MPI_Allreduce((&flg),(flag),(1), (MPIU_BOOL),((MPI_Op)(0x58000005)),(PetscObjectComm((PetscObject )A)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1916,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1917 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1918 | } |
1919 | |
1920 | PetscErrorCode MatCopy_MPIBAIJ(Mat A,Mat B,MatStructure str) |
1921 | { |
1922 | PetscErrorCode ierr; |
1923 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data; |
1924 | Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)B->data; |
1925 | |
1926 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1926; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1927 | /* If the two matrices don't have the same copy implementation, they aren't compatible for fast copy. */ |
1928 | if ((str != SAME_NONZERO_PATTERN) || (A->ops->copy != B->ops->copy)) { |
1929 | ierr = MatCopy_Basic(A,B,str);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1929,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1930 | } else { |
1931 | ierr = MatCopy(a->A,b->A,str);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1931,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1932 | ierr = MatCopy(a->B,b->B,str);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1932,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1933 | } |
1934 | ierr = PetscObjectStateIncrease((PetscObject)B)(((PetscObject)B)->state++,0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1934,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1935 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1936 | } |
1937 | |
1938 | PetscErrorCode MatSetUp_MPIBAIJ(Mat A) |
1939 | { |
1940 | PetscErrorCode ierr; |
1941 | |
1942 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1942; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1943 | ierr = MatMPIBAIJSetPreallocation(A,A->rmap->bs,PETSC_DEFAULT-2,0,PETSC_DEFAULT-2,0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1943,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1944 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1945 | } |
1946 | |
1947 | PetscErrorCode MatAXPYGetPreallocation_MPIBAIJ(Mat Y,const PetscInt *yltog,Mat X,const PetscInt *xltog,PetscInt *nnz) |
1948 | { |
1949 | PetscErrorCode ierr; |
1950 | PetscInt bs = Y->rmap->bs,m = Y->rmap->N/bs; |
1951 | Mat_SeqBAIJ *x = (Mat_SeqBAIJ*)X->data; |
1952 | Mat_SeqBAIJ *y = (Mat_SeqBAIJ*)Y->data; |
1953 | |
1954 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1954; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1955 | ierr = MatAXPYGetPreallocation_MPIX_private(m,x->i,x->j,xltog,y->i,y->j,yltog,nnz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1955,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1956 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
1957 | } |
1958 | |
1959 | PetscErrorCode MatAXPY_MPIBAIJ(Mat Y,PetscScalar a,Mat X,MatStructure str) |
1960 | { |
1961 | PetscErrorCode ierr; |
1962 | Mat_MPIBAIJ *xx=(Mat_MPIBAIJ*)X->data,*yy=(Mat_MPIBAIJ*)Y->data; |
1963 | PetscBLASInt bnz,one=1; |
1964 | Mat_SeqBAIJ *x,*y; |
1965 | PetscInt bs2 = Y->rmap->bs*Y->rmap->bs; |
1966 | |
1967 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1967; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
1968 | if (str == SAME_NONZERO_PATTERN) { |
1969 | PetscScalar alpha = a; |
1970 | x = (Mat_SeqBAIJ*)xx->A->data; |
1971 | y = (Mat_SeqBAIJ*)yy->A->data; |
1972 | ierr = PetscBLASIntCast(x->nz*bs2,&bnz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1972,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1973 | PetscStackCallBLAS("BLASaxpy",BLASaxpy_(&bnz,&alpha,x->a,&one,y->a,&one))do { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = "BLASaxpy"; petscstack->file[petscstack->currentsize ] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1973; petscstack ->petscroutine[petscstack->currentsize] = PETSC_FALSE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_TRUE || petscstack->hotdepth); } ; } while (0); daxpy_(&bnz,&alpha,x->a,&one,y->a,&one ); do { do {PetscErrorCode _7_ierr = PetscMallocValidate(1973 ,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" );do {if (__builtin_expect(!!(_7_ierr),0)) return PetscError( ((MPI_Comm)0x44000001),1973,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_7_ierr,PETSC_ERROR_REPEAT," ");} while (0);} while(0); do { ; if (petscstack && petscstack->currentsize > 0 ) { petscstack->currentsize--; petscstack->function[petscstack ->currentsize] = 0; petscstack->file[petscstack->currentsize ] = 0; petscstack->line[petscstack->currentsize] = 0; petscstack ->petscroutine[petscstack->currentsize] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack-> hotdepth-1)<(0)) ? (0) : (petscstack->hotdepth-1)); } ; } while (0); } while (0); } while(0); |
1974 | x = (Mat_SeqBAIJ*)xx->B->data; |
1975 | y = (Mat_SeqBAIJ*)yy->B->data; |
1976 | ierr = PetscBLASIntCast(x->nz*bs2,&bnz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1976,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1977 | PetscStackCallBLAS("BLASaxpy",BLASaxpy_(&bnz,&alpha,x->a,&one,y->a,&one))do { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = "BLASaxpy"; petscstack->file[petscstack->currentsize ] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 1977; petscstack ->petscroutine[petscstack->currentsize] = PETSC_FALSE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_TRUE || petscstack->hotdepth); } ; } while (0); daxpy_(&bnz,&alpha,x->a,&one,y->a,&one ); do { do {PetscErrorCode _7_ierr = PetscMallocValidate(1977 ,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" );do {if (__builtin_expect(!!(_7_ierr),0)) return PetscError( ((MPI_Comm)0x44000001),1977,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_7_ierr,PETSC_ERROR_REPEAT," ");} while (0);} while(0); do { ; if (petscstack && petscstack->currentsize > 0 ) { petscstack->currentsize--; petscstack->function[petscstack ->currentsize] = 0; petscstack->file[petscstack->currentsize ] = 0; petscstack->line[petscstack->currentsize] = 0; petscstack ->petscroutine[petscstack->currentsize] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack-> hotdepth-1)<(0)) ? (0) : (petscstack->hotdepth-1)); } ; } while (0); } while (0); } while(0); |
1978 | ierr = PetscObjectStateIncrease((PetscObject)Y)(((PetscObject)Y)->state++,0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1978,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1979 | } else if (str == SUBSET_NONZERO_PATTERN) { /* nonzeros of X is a subset of Y's */ |
1980 | ierr = MatAXPY_Basic(Y,a,X,str);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1980,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1981 | } else { |
1982 | Mat B; |
1983 | PetscInt *nnz_d,*nnz_o,bs=Y->rmap->bs; |
1984 | ierr = PetscMalloc1(yy->A->rmap->N,&nnz_d)PetscMallocA(1,PETSC_FALSE,1984,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(yy->A->rmap->N)*sizeof(**(&nnz_d)),(& nnz_d));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1984,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1985 | ierr = PetscMalloc1(yy->B->rmap->N,&nnz_o)PetscMallocA(1,PETSC_FALSE,1985,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(yy->B->rmap->N)*sizeof(**(&nnz_o)),(& nnz_o));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1985,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1986 | ierr = MatCreate(PetscObjectComm((PetscObject)Y),&B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1986,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1987 | ierr = PetscObjectSetName((PetscObject)B,((PetscObject)Y)->name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1987,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1988 | ierr = MatSetSizes(B,Y->rmap->n,Y->cmap->n,Y->rmap->N,Y->cmap->N);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1988,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1989 | ierr = MatSetBlockSizesFromMats(B,Y,Y);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1989,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1990 | ierr = MatSetType(B,MATMPIBAIJ"mpibaij");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1990,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1991 | ierr = MatAXPYGetPreallocation_SeqBAIJ(yy->A,xx->A,nnz_d);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1991,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1992 | ierr = MatAXPYGetPreallocation_MPIBAIJ(yy->B,yy->garray,xx->B,xx->garray,nnz_o);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1992,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1993 | ierr = MatMPIBAIJSetPreallocation(B,bs,0,nnz_d,0,nnz_o);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1993,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1994 | /* MatAXPY_BasicWithPreallocation() for BAIJ matrix is much slower than AIJ, even for bs=1 ! */ |
1995 | ierr = MatAXPY_BasicWithPreallocation(B,Y,a,X,str);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1995,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1996 | ierr = MatHeaderReplace(Y,&B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1996,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1997 | ierr = PetscFree(nnz_d)((*PetscTrFree)((void*)(nnz_d),1997,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((nnz_d) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1997,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1998 | ierr = PetscFree(nnz_o)((*PetscTrFree)((void*)(nnz_o),1998,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((nnz_o) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),1998,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
1999 | } |
2000 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2001 | } |
2002 | |
2003 | PetscErrorCode MatRealPart_MPIBAIJ(Mat A) |
2004 | { |
2005 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data; |
2006 | PetscErrorCode ierr; |
2007 | |
2008 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2008; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2009 | ierr = MatRealPart(a->A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2009,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2010 | ierr = MatRealPart(a->B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2010,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2011 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2012 | } |
2013 | |
2014 | PetscErrorCode MatImaginaryPart_MPIBAIJ(Mat A) |
2015 | { |
2016 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data; |
2017 | PetscErrorCode ierr; |
2018 | |
2019 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2019; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2020 | ierr = MatImaginaryPart(a->A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2020,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2021 | ierr = MatImaginaryPart(a->B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2021,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2022 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2023 | } |
2024 | |
2025 | PetscErrorCode MatCreateSubMatrix_MPIBAIJ(Mat mat,IS isrow,IS iscol,MatReuse call,Mat *newmat) |
2026 | { |
2027 | PetscErrorCode ierr; |
2028 | IS iscol_local; |
2029 | PetscInt csize; |
2030 | |
2031 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2031; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2032 | ierr = ISGetLocalSize(iscol,&csize);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2032,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2033 | if (call == MAT_REUSE_MATRIX) { |
2034 | ierr = PetscObjectQuery((PetscObject)*newmat,"ISAllGather",(PetscObject*)&iscol_local);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2034,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2035 | if (!iscol_local) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Submatrix passed in was not used before, cannot reuse")return PetscError(((MPI_Comm)0x44000001),2035,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,73,PETSC_ERROR_INITIAL,"Submatrix passed in was not used before, cannot reuse" ); |
2036 | } else { |
2037 | ierr = ISAllGather(iscol,&iscol_local);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2037,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2038 | } |
2039 | ierr = MatCreateSubMatrix_MPIBAIJ_Private(mat,isrow,iscol_local,csize,call,newmat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2039,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2040 | if (call == MAT_INITIAL_MATRIX) { |
2041 | ierr = PetscObjectCompose((PetscObject)*newmat,"ISAllGather",(PetscObject)iscol_local);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2041,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2042 | ierr = ISDestroy(&iscol_local);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2042,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2043 | } |
2044 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2045 | } |
2046 | |
2047 | /* |
2048 | Not great since it makes two copies of the submatrix, first an SeqBAIJ |
2049 | in local and then by concatenating the local matrices the end result. |
2050 | Writing it directly would be much like MatCreateSubMatrices_MPIBAIJ(). |
2051 | This routine is used for BAIJ and SBAIJ matrices (unfortunate dependency). |
2052 | */ |
2053 | PetscErrorCode MatCreateSubMatrix_MPIBAIJ_Private(Mat mat,IS isrow,IS iscol,PetscInt csize,MatReuse call,Mat *newmat) |
2054 | { |
2055 | PetscErrorCode ierr; |
2056 | PetscMPIInt rank,size; |
2057 | PetscInt i,m,n,rstart,row,rend,nz,*cwork,j,bs; |
2058 | PetscInt *ii,*jj,nlocal,*dlens,*olens,dlen,olen,jend,mglobal; |
2059 | Mat M,Mreuse; |
2060 | MatScalar *vwork,*aa; |
2061 | MPI_Comm comm; |
2062 | IS isrow_new, iscol_new; |
2063 | Mat_SeqBAIJ *aij; |
2064 | |
2065 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2065; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2066 | ierr = PetscObjectGetComm((PetscObject)mat,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2066,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2067 | ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2067,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2068 | ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2068,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2069 | /* The compression and expansion should be avoided. Doesn't point |
2070 | out errors, might change the indices, hence buggey */ |
2071 | ierr = ISCompressIndicesGeneral(mat->rmap->N,mat->rmap->n,mat->rmap->bs,1,&isrow,&isrow_new);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2071,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2072 | ierr = ISCompressIndicesGeneral(mat->cmap->N,mat->cmap->n,mat->cmap->bs,1,&iscol,&iscol_new);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2072,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2073 | |
2074 | if (call == MAT_REUSE_MATRIX) { |
2075 | ierr = PetscObjectQuery((PetscObject)*newmat,"SubMatrix",(PetscObject*)&Mreuse);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2075,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2076 | if (!Mreuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Submatrix passed in was not used before, cannot reuse")return PetscError(((MPI_Comm)0x44000001),2076,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,73,PETSC_ERROR_INITIAL,"Submatrix passed in was not used before, cannot reuse" ); |
2077 | ierr = MatCreateSubMatrices_MPIBAIJ_local(mat,1,&isrow_new,&iscol_new,MAT_REUSE_MATRIX,&Mreuse);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2077,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2078 | } else { |
2079 | ierr = MatCreateSubMatrices_MPIBAIJ_local(mat,1,&isrow_new,&iscol_new,MAT_INITIAL_MATRIX,&Mreuse);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2079,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2080 | } |
2081 | ierr = ISDestroy(&isrow_new);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2081,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2082 | ierr = ISDestroy(&iscol_new);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2082,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2083 | /* |
2084 | m - number of local rows |
2085 | n - number of columns (same on all processors) |
2086 | rstart - first row in new global matrix generated |
2087 | */ |
2088 | ierr = MatGetBlockSize(mat,&bs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2088,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2089 | ierr = MatGetSize(Mreuse,&m,&n);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2089,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2090 | m = m/bs; |
2091 | n = n/bs; |
2092 | |
2093 | if (call == MAT_INITIAL_MATRIX) { |
2094 | aij = (Mat_SeqBAIJ*)(Mreuse)->data; |
2095 | ii = aij->i; |
2096 | jj = aij->j; |
2097 | |
2098 | /* |
2099 | Determine the number of non-zeros in the diagonal and off-diagonal |
2100 | portions of the matrix in order to do correct preallocation |
2101 | */ |
2102 | |
2103 | /* first get start and end of "diagonal" columns */ |
2104 | if (csize == PETSC_DECIDE-1) { |
2105 | ierr = ISGetSize(isrow,&mglobal);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2105,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2106 | if (mglobal == n*bs) { /* square matrix */ |
2107 | nlocal = m; |
2108 | } else { |
2109 | nlocal = n/size + ((n % size) > rank); |
2110 | } |
2111 | } else { |
2112 | nlocal = csize/bs; |
2113 | } |
2114 | ierr = MPI_Scan(&nlocal,&rend,1,MPIU_INT((MPI_Datatype)0x4c000405),MPI_SUM(MPI_Op)(0x58000003),comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2114,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2115 | rstart = rend - nlocal; |
2116 | if (rank == size - 1 && rend != n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Local column sizes %D do not add up to total number of columns %D",rend,n)return PetscError(((MPI_Comm)0x44000001),2116,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,60,PETSC_ERROR_INITIAL,"Local column sizes %D do not add up to total number of columns %D" ,rend,n); |
2117 | |
2118 | /* next, compute all the lengths */ |
2119 | ierr = PetscMalloc2(m+1,&dlens,m+1,&olens)PetscMallocA(2,PETSC_FALSE,2119,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(m+1)*sizeof(**(&dlens)),(&dlens),(size_t)(m +1)*sizeof(**(&olens)),(&olens));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2119,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2120 | for (i=0; i<m; i++) { |
2121 | jend = ii[i+1] - ii[i]; |
2122 | olen = 0; |
2123 | dlen = 0; |
2124 | for (j=0; j<jend; j++) { |
2125 | if (*jj < rstart || *jj >= rend) olen++; |
2126 | else dlen++; |
2127 | jj++; |
2128 | } |
2129 | olens[i] = olen; |
2130 | dlens[i] = dlen; |
2131 | } |
2132 | ierr = MatCreate(comm,&M);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2132,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2133 | ierr = MatSetSizes(M,bs*m,bs*nlocal,PETSC_DECIDE-1,bs*n);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2133,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2134 | ierr = MatSetType(M,((PetscObject)mat)->type_name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2134,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2135 | ierr = MatMPIBAIJSetPreallocation(M,bs,0,dlens,0,olens);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2135,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2136 | ierr = MatMPISBAIJSetPreallocation(M,bs,0,dlens,0,olens);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2136,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2137 | ierr = PetscFree2(dlens,olens)PetscFreeA(2,2137,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,&(dlens),&(olens));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2137,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2138 | } else { |
2139 | PetscInt ml,nl; |
2140 | |
2141 | M = *newmat; |
2142 | ierr = MatGetLocalSize(M,&ml,&nl);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2142,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2143 | if (ml != m) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Previous matrix must be same size/layout as request")return PetscError(((MPI_Comm)0x44000001),2143,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,60,PETSC_ERROR_INITIAL,"Previous matrix must be same size/layout as request" ); |
2144 | ierr = MatZeroEntries(M);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2144,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2145 | /* |
2146 | The next two lines are needed so we may call MatSetValues_MPIAIJ() below directly, |
2147 | rather than the slower MatSetValues(). |
2148 | */ |
2149 | M->was_assembled = PETSC_TRUE; |
2150 | M->assembled = PETSC_FALSE; |
2151 | } |
2152 | ierr = MatSetOption(M,MAT_ROW_ORIENTED,PETSC_FALSE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2152,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2153 | ierr = MatGetOwnershipRange(M,&rstart,&rend);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2153,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2154 | aij = (Mat_SeqBAIJ*)(Mreuse)->data; |
2155 | ii = aij->i; |
2156 | jj = aij->j; |
2157 | aa = aij->a; |
2158 | for (i=0; i<m; i++) { |
2159 | row = rstart/bs + i; |
2160 | nz = ii[i+1] - ii[i]; |
2161 | cwork = jj; jj += nz; |
2162 | vwork = aa; aa += nz*bs*bs; |
2163 | ierr = MatSetValuesBlocked_MPIBAIJ(M,1,&row,nz,cwork,vwork,INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2163,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2164 | } |
2165 | |
2166 | ierr = MatAssemblyBegin(M,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2166,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2167 | ierr = MatAssemblyEnd(M,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2167,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2168 | *newmat = M; |
2169 | |
2170 | /* save submatrix used in processor for next request */ |
2171 | if (call == MAT_INITIAL_MATRIX) { |
2172 | ierr = PetscObjectCompose((PetscObject)M,"SubMatrix",(PetscObject)Mreuse);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2172,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2173 | ierr = PetscObjectDereference((PetscObject)Mreuse);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2173,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2174 | } |
2175 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2176 | } |
2177 | |
2178 | PetscErrorCode MatPermute_MPIBAIJ(Mat A,IS rowp,IS colp,Mat *B) |
2179 | { |
2180 | MPI_Comm comm,pcomm; |
2181 | PetscInt clocal_size,nrows; |
2182 | const PetscInt *rows; |
2183 | PetscMPIInt size; |
2184 | IS crowp,lcolp; |
2185 | PetscErrorCode ierr; |
2186 | |
2187 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2187; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2188 | ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2188,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2189 | /* make a collective version of 'rowp' */ |
2190 | ierr = PetscObjectGetComm((PetscObject)rowp,&pcomm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2190,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2191 | if (pcomm==comm) { |
2192 | crowp = rowp; |
2193 | } else { |
2194 | ierr = ISGetSize(rowp,&nrows);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2194,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2195 | ierr = ISGetIndices(rowp,&rows);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2195,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2196 | ierr = ISCreateGeneral(comm,nrows,rows,PETSC_COPY_VALUES,&crowp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2196,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2197 | ierr = ISRestoreIndices(rowp,&rows);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2197,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2198 | } |
2199 | ierr = ISSetPermutation(crowp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2199,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2200 | /* make a local version of 'colp' */ |
2201 | ierr = PetscObjectGetComm((PetscObject)colp,&pcomm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2201,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2202 | ierr = MPI_Comm_size(pcomm,&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2202,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2203 | if (size==1) { |
2204 | lcolp = colp; |
2205 | } else { |
2206 | ierr = ISAllGather(colp,&lcolp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2206,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2207 | } |
2208 | ierr = ISSetPermutation(lcolp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2208,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2209 | /* now we just get the submatrix */ |
2210 | ierr = MatGetLocalSize(A,NULL((void*)0),&clocal_size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2210,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2211 | ierr = MatCreateSubMatrix_MPIBAIJ_Private(A,crowp,lcolp,clocal_size,MAT_INITIAL_MATRIX,B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2211,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2212 | /* clean up */ |
2213 | if (pcomm!=comm) { |
2214 | ierr = ISDestroy(&crowp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2214,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2215 | } |
2216 | if (size>1) { |
2217 | ierr = ISDestroy(&lcolp);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2217,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2218 | } |
2219 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2220 | } |
2221 | |
2222 | PetscErrorCode MatGetGhosts_MPIBAIJ(Mat mat,PetscInt *nghosts,const PetscInt *ghosts[]) |
2223 | { |
2224 | Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*) mat->data; |
2225 | Mat_SeqBAIJ *B = (Mat_SeqBAIJ*)baij->B->data; |
2226 | |
2227 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2227; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2228 | if (nghosts) *nghosts = B->nbs; |
2229 | if (ghosts) *ghosts = baij->garray; |
2230 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2231 | } |
2232 | |
2233 | PetscErrorCode MatGetSeqNonzeroStructure_MPIBAIJ(Mat A,Mat *newmat) |
2234 | { |
2235 | Mat B; |
2236 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data; |
2237 | Mat_SeqBAIJ *ad = (Mat_SeqBAIJ*)a->A->data,*bd = (Mat_SeqBAIJ*)a->B->data; |
2238 | Mat_SeqAIJ *b; |
2239 | PetscErrorCode ierr; |
2240 | PetscMPIInt size,rank,*recvcounts = 0,*displs = 0; |
2241 | PetscInt sendcount,i,*rstarts = A->rmap->range,n,cnt,j,bs = A->rmap->bs; |
2242 | PetscInt m,*garray = a->garray,*lens,*jsendbuf,*a_jsendbuf,*b_jsendbuf; |
2243 | |
2244 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2244; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2245 | ierr = MPI_Comm_size(PetscObjectComm((PetscObject)A),&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2245,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2246 | ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)A),&rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2246,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2247 | |
2248 | /* ---------------------------------------------------------------- |
2249 | Tell every processor the number of nonzeros per row |
2250 | */ |
2251 | ierr = PetscMalloc1(A->rmap->N/bs,&lens)PetscMallocA(1,PETSC_FALSE,2251,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(A->rmap->N/bs)*sizeof(**(&lens)),(&lens ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2251,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2252 | for (i=A->rmap->rstart/bs; i<A->rmap->rend/bs; i++) { |
2253 | lens[i] = ad->i[i-A->rmap->rstart/bs+1] - ad->i[i-A->rmap->rstart/bs] + bd->i[i-A->rmap->rstart/bs+1] - bd->i[i-A->rmap->rstart/bs]; |
2254 | } |
2255 | ierr = PetscMalloc1(2*size,&recvcounts)PetscMallocA(1,PETSC_FALSE,2255,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(2*size)*sizeof(**(&recvcounts)),(&recvcounts ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2255,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2256 | displs = recvcounts + size; |
2257 | for (i=0; i<size; i++) { |
2258 | recvcounts[i] = A->rmap->range[i+1]/bs - A->rmap->range[i]/bs; |
2259 | displs[i] = A->rmap->range[i]/bs; |
2260 | } |
2261 | #if defined(PETSC_HAVE_MPI_IN_PLACE1) |
2262 | ierr = MPI_Allgatherv(MPI_IN_PLACE,0,MPI_DATATYPE_NULL,lens,recvcounts,displs,MPIU_INT,PetscObjectComm((PetscObject)A))((petsc_gather_ct += PetscMPIParallelComm((PetscObjectComm((PetscObject )A))),0) || MPI_Allgatherv(((void *) -1),(0),(((MPI_Datatype) 0x0c000000)),(lens),(recvcounts),(displs),(((MPI_Datatype)0x4c000405 )),(PetscObjectComm((PetscObject)A))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2262,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2263 | #else |
2264 | sendcount = A->rmap->rend/bs - A->rmap->rstart/bs; |
2265 | ierr = MPI_Allgatherv(lens+A->rmap->rstart/bs,sendcount,MPIU_INT,lens,recvcounts,displs,MPIU_INT,PetscObjectComm((PetscObject)A))((petsc_gather_ct += PetscMPIParallelComm((PetscObjectComm((PetscObject )A))),0) || MPI_Allgatherv((lens+A->rmap->rstart/bs),(sendcount ),(((MPI_Datatype)0x4c000405)),(lens),(recvcounts),(displs),( ((MPI_Datatype)0x4c000405)),(PetscObjectComm((PetscObject)A)) ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2265,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2266 | #endif |
2267 | /* --------------------------------------------------------------- |
2268 | Create the sequential matrix of the same type as the local block diagonal |
2269 | */ |
2270 | ierr = MatCreate(PETSC_COMM_SELF((MPI_Comm)0x44000001),&B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2270,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2271 | ierr = MatSetSizes(B,A->rmap->N/bs,A->cmap->N/bs,PETSC_DETERMINE-1,PETSC_DETERMINE-1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2271,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2272 | ierr = MatSetType(B,MATSEQAIJ"seqaij");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2272,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2273 | ierr = MatSeqAIJSetPreallocation(B,0,lens);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2273,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2274 | b = (Mat_SeqAIJ*)B->data; |
2275 | |
2276 | /*-------------------------------------------------------------------- |
2277 | Copy my part of matrix column indices over |
2278 | */ |
2279 | sendcount = ad->nz + bd->nz; |
2280 | jsendbuf = b->j + b->i[rstarts[rank]/bs]; |
2281 | a_jsendbuf = ad->j; |
2282 | b_jsendbuf = bd->j; |
2283 | n = A->rmap->rend/bs - A->rmap->rstart/bs; |
2284 | cnt = 0; |
2285 | for (i=0; i<n; i++) { |
2286 | |
2287 | /* put in lower diagonal portion */ |
2288 | m = bd->i[i+1] - bd->i[i]; |
2289 | while (m > 0) { |
2290 | /* is it above diagonal (in bd (compressed) numbering) */ |
2291 | if (garray[*b_jsendbuf] > A->rmap->rstart/bs + i) break; |
2292 | jsendbuf[cnt++] = garray[*b_jsendbuf++]; |
2293 | m--; |
2294 | } |
2295 | |
2296 | /* put in diagonal portion */ |
2297 | for (j=ad->i[i]; j<ad->i[i+1]; j++) { |
2298 | jsendbuf[cnt++] = A->rmap->rstart/bs + *a_jsendbuf++; |
2299 | } |
2300 | |
2301 | /* put in upper diagonal portion */ |
2302 | while (m-- > 0) { |
2303 | jsendbuf[cnt++] = garray[*b_jsendbuf++]; |
2304 | } |
2305 | } |
2306 | if (cnt != sendcount) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Corrupted PETSc matrix: nz given %D actual nz %D",sendcount,cnt)return PetscError(((MPI_Comm)0x44000001),2306,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,77,PETSC_ERROR_INITIAL,"Corrupted PETSc matrix: nz given %D actual nz %D" ,sendcount,cnt); |
2307 | |
2308 | /*-------------------------------------------------------------------- |
2309 | Gather all column indices to all processors |
2310 | */ |
2311 | for (i=0; i<size; i++) { |
2312 | recvcounts[i] = 0; |
2313 | for (j=A->rmap->range[i]/bs; j<A->rmap->range[i+1]/bs; j++) { |
2314 | recvcounts[i] += lens[j]; |
2315 | } |
2316 | } |
2317 | displs[0] = 0; |
2318 | for (i=1; i<size; i++) { |
2319 | displs[i] = displs[i-1] + recvcounts[i-1]; |
2320 | } |
2321 | #if defined(PETSC_HAVE_MPI_IN_PLACE1) |
2322 | ierr = MPI_Allgatherv(MPI_IN_PLACE,0,MPI_DATATYPE_NULL,b->j,recvcounts,displs,MPIU_INT,PetscObjectComm((PetscObject)A))((petsc_gather_ct += PetscMPIParallelComm((PetscObjectComm((PetscObject )A))),0) || MPI_Allgatherv(((void *) -1),(0),(((MPI_Datatype) 0x0c000000)),(b->j),(recvcounts),(displs),(((MPI_Datatype) 0x4c000405)),(PetscObjectComm((PetscObject)A))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2322,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2323 | #else |
2324 | ierr = MPI_Allgatherv(jsendbuf,sendcount,MPIU_INT,b->j,recvcounts,displs,MPIU_INT,PetscObjectComm((PetscObject)A))((petsc_gather_ct += PetscMPIParallelComm((PetscObjectComm((PetscObject )A))),0) || MPI_Allgatherv((jsendbuf),(sendcount),(((MPI_Datatype )0x4c000405)),(b->j),(recvcounts),(displs),(((MPI_Datatype )0x4c000405)),(PetscObjectComm((PetscObject)A))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2324,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2325 | #endif |
2326 | /*-------------------------------------------------------------------- |
2327 | Assemble the matrix into useable form (note numerical values not yet set) |
2328 | */ |
2329 | /* set the b->ilen (length of each row) values */ |
2330 | ierr = PetscArraycpy(b->ilen,lens,A->rmap->N/bs)((sizeof(*(b->ilen)) != sizeof(*(lens))) || PetscMemcpy(b-> ilen,lens,(A->rmap->N/bs)*sizeof(*(b->ilen))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2330,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2331 | /* set the b->i indices */ |
2332 | b->i[0] = 0; |
2333 | for (i=1; i<=A->rmap->N/bs; i++) { |
2334 | b->i[i] = b->i[i-1] + lens[i-1]; |
2335 | } |
2336 | ierr = PetscFree(lens)((*PetscTrFree)((void*)(lens),2336,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((lens) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2336,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2337 | ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2337,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2338 | ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2338,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2339 | ierr = PetscFree(recvcounts)((*PetscTrFree)((void*)(recvcounts),2339,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((recvcounts) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2339,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2340 | |
2341 | if (A->symmetric) { |
2342 | ierr = MatSetOption(B,MAT_SYMMETRIC,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2342,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2343 | } else if (A->hermitian) { |
2344 | ierr = MatSetOption(B,MAT_HERMITIAN,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2344,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2345 | } else if (A->structurally_symmetric) { |
2346 | ierr = MatSetOption(B,MAT_STRUCTURALLY_SYMMETRIC,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2346,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2347 | } |
2348 | *newmat = B; |
2349 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2350 | } |
2351 | |
2352 | PetscErrorCode MatSOR_MPIBAIJ(Mat matin,Vec bb,PetscReal omega,MatSORType flag,PetscReal fshift,PetscInt its,PetscInt lits,Vec xx) |
2353 | { |
2354 | Mat_MPIBAIJ *mat = (Mat_MPIBAIJ*)matin->data; |
2355 | PetscErrorCode ierr; |
2356 | Vec bb1 = 0; |
2357 | |
2358 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2358; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2359 | if (flag == SOR_APPLY_UPPER) { |
2360 | ierr = (*mat->A->ops->sor)(mat->A,bb,omega,flag,fshift,lits,1,xx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2360,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2361 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2362 | } |
2363 | |
2364 | if (its > 1 || ~flag & SOR_ZERO_INITIAL_GUESS) { |
2365 | ierr = VecDuplicate(bb,&bb1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2365,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2366 | } |
2367 | |
2368 | if ((flag & SOR_LOCAL_SYMMETRIC_SWEEP) == SOR_LOCAL_SYMMETRIC_SWEEP) { |
2369 | if (flag & SOR_ZERO_INITIAL_GUESS) { |
2370 | ierr = (*mat->A->ops->sor)(mat->A,bb,omega,flag,fshift,lits,1,xx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2370,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2371 | its--; |
2372 | } |
2373 | |
2374 | while (its--) { |
2375 | ierr = VecScatterBegin(mat->Mvctx,xx,mat->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2375,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2376 | ierr = VecScatterEnd(mat->Mvctx,xx,mat->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2376,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2377 | |
2378 | /* update rhs: bb1 = bb - B*x */ |
2379 | ierr = VecScale(mat->lvec,-1.0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2379,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2380 | ierr = (*mat->B->ops->multadd)(mat->B,mat->lvec,bb,bb1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2380,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2381 | |
2382 | /* local sweep */ |
2383 | ierr = (*mat->A->ops->sor)(mat->A,bb1,omega,SOR_SYMMETRIC_SWEEP,fshift,lits,1,xx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2383,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2384 | } |
2385 | } else if (flag & SOR_LOCAL_FORWARD_SWEEP) { |
2386 | if (flag & SOR_ZERO_INITIAL_GUESS) { |
2387 | ierr = (*mat->A->ops->sor)(mat->A,bb,omega,flag,fshift,lits,1,xx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2387,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2388 | its--; |
2389 | } |
2390 | while (its--) { |
2391 | ierr = VecScatterBegin(mat->Mvctx,xx,mat->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2391,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2392 | ierr = VecScatterEnd(mat->Mvctx,xx,mat->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2392,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2393 | |
2394 | /* update rhs: bb1 = bb - B*x */ |
2395 | ierr = VecScale(mat->lvec,-1.0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2395,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2396 | ierr = (*mat->B->ops->multadd)(mat->B,mat->lvec,bb,bb1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2396,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2397 | |
2398 | /* local sweep */ |
2399 | ierr = (*mat->A->ops->sor)(mat->A,bb1,omega,SOR_FORWARD_SWEEP,fshift,lits,1,xx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2399,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2400 | } |
2401 | } else if (flag & SOR_LOCAL_BACKWARD_SWEEP) { |
2402 | if (flag & SOR_ZERO_INITIAL_GUESS) { |
2403 | ierr = (*mat->A->ops->sor)(mat->A,bb,omega,flag,fshift,lits,1,xx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2403,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2404 | its--; |
2405 | } |
2406 | while (its--) { |
2407 | ierr = VecScatterBegin(mat->Mvctx,xx,mat->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2407,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2408 | ierr = VecScatterEnd(mat->Mvctx,xx,mat->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2408,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2409 | |
2410 | /* update rhs: bb1 = bb - B*x */ |
2411 | ierr = VecScale(mat->lvec,-1.0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2411,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2412 | ierr = (*mat->B->ops->multadd)(mat->B,mat->lvec,bb,bb1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2412,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2413 | |
2414 | /* local sweep */ |
2415 | ierr = (*mat->A->ops->sor)(mat->A,bb1,omega,SOR_BACKWARD_SWEEP,fshift,lits,1,xx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2415,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2416 | } |
2417 | } else SETERRQ(PetscObjectComm((PetscObject)matin),PETSC_ERR_SUP,"Parallel version of SOR requested not supported")return PetscError(PetscObjectComm((PetscObject)matin),2417,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,56,PETSC_ERROR_INITIAL,"Parallel version of SOR requested not supported" ); |
2418 | |
2419 | ierr = VecDestroy(&bb1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2419,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2420 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2421 | } |
2422 | |
2423 | PetscErrorCode MatGetColumnNorms_MPIBAIJ(Mat A,NormType type,PetscReal *norms) |
2424 | { |
2425 | PetscErrorCode ierr; |
2426 | Mat_MPIBAIJ *aij = (Mat_MPIBAIJ*)A->data; |
2427 | PetscInt N,i,*garray = aij->garray; |
2428 | PetscInt ib,jb,bs = A->rmap->bs; |
2429 | Mat_SeqBAIJ *a_aij = (Mat_SeqBAIJ*) aij->A->data; |
2430 | MatScalar *a_val = a_aij->a; |
2431 | Mat_SeqBAIJ *b_aij = (Mat_SeqBAIJ*) aij->B->data; |
2432 | MatScalar *b_val = b_aij->a; |
2433 | PetscReal *work; |
2434 | |
2435 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2435; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2436 | ierr = MatGetSize(A,NULL((void*)0),&N);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2436,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2437 | ierr = PetscCalloc1(N,&work)PetscMallocA(1,PETSC_TRUE,2437,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(N)*sizeof(**(&work)),(&work));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2437,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2438 | if (type == NORM_2) { |
2439 | for (i=a_aij->i[0]; i<a_aij->i[aij->A->rmap->n/bs]; i++) { |
2440 | for (jb=0; jb<bs; jb++) { |
2441 | for (ib=0; ib<bs; ib++) { |
2442 | work[A->cmap->rstart + a_aij->j[i] * bs + jb] += PetscAbsScalar(*a_val * *a_val)fabs(*a_val * *a_val); |
2443 | a_val++; |
2444 | } |
2445 | } |
2446 | } |
2447 | for (i=b_aij->i[0]; i<b_aij->i[aij->B->rmap->n/bs]; i++) { |
2448 | for (jb=0; jb<bs; jb++) { |
2449 | for (ib=0; ib<bs; ib++) { |
2450 | work[garray[b_aij->j[i]] * bs + jb] += PetscAbsScalar(*b_val * *b_val)fabs(*b_val * *b_val); |
2451 | b_val++; |
2452 | } |
2453 | } |
2454 | } |
2455 | } else if (type == NORM_1) { |
2456 | for (i=a_aij->i[0]; i<a_aij->i[aij->A->rmap->n/bs]; i++) { |
2457 | for (jb=0; jb<bs; jb++) { |
2458 | for (ib=0; ib<bs; ib++) { |
2459 | work[A->cmap->rstart + a_aij->j[i] * bs + jb] += PetscAbsScalar(*a_val)fabs(*a_val); |
2460 | a_val++; |
2461 | } |
2462 | } |
2463 | } |
2464 | for (i=b_aij->i[0]; i<b_aij->i[aij->B->rmap->n/bs]; i++) { |
2465 | for (jb=0; jb<bs; jb++) { |
2466 | for (ib=0; ib<bs; ib++) { |
2467 | work[garray[b_aij->j[i]] * bs + jb] += PetscAbsScalar(*b_val)fabs(*b_val); |
2468 | b_val++; |
2469 | } |
2470 | } |
2471 | } |
2472 | } else if (type == NORM_INFINITY) { |
2473 | for (i=a_aij->i[0]; i<a_aij->i[aij->A->rmap->n/bs]; i++) { |
2474 | for (jb=0; jb<bs; jb++) { |
2475 | for (ib=0; ib<bs; ib++) { |
2476 | int col = A->cmap->rstart + a_aij->j[i] * bs + jb; |
2477 | work[col] = PetscMax(PetscAbsScalar(*a_val), work[col])(((fabs(*a_val))<(work[col])) ? (work[col]) : (fabs(*a_val ))); |
2478 | a_val++; |
2479 | } |
2480 | } |
2481 | } |
2482 | for (i=b_aij->i[0]; i<b_aij->i[aij->B->rmap->n/bs]; i++) { |
2483 | for (jb=0; jb<bs; jb++) { |
2484 | for (ib=0; ib<bs; ib++) { |
2485 | int col = garray[b_aij->j[i]] * bs + jb; |
2486 | work[col] = PetscMax(PetscAbsScalar(*b_val), work[col])(((fabs(*b_val))<(work[col])) ? (work[col]) : (fabs(*b_val ))); |
2487 | b_val++; |
2488 | } |
2489 | } |
2490 | } |
2491 | } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONG,"Unknown NormType")return PetscError(PetscObjectComm((PetscObject)A),2491,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,62,PETSC_ERROR_INITIAL,"Unknown NormType"); |
2492 | if (type == NORM_INFINITY) { |
2493 | ierr = MPIU_Allreduce(work,norms,N,MPIU_REAL,MPIU_MAX,PetscObjectComm((PetscObject)A))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject)A),N ,2493,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm ((PetscObject)A))),0) || MPI_Allreduce((work),(norms),(N),((( MPI_Datatype)0x4c00080b)),((MPI_Op)(0x58000001)),(PetscObjectComm ((PetscObject)A)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2493,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2494 | } else { |
2495 | ierr = MPIU_Allreduce(work,norms,N,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A))(PetscAllreduceBarrierCheck(PetscObjectComm((PetscObject)A),N ,2495,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm ((PetscObject)A))),0) || MPI_Allreduce((work),(norms),(N),((( MPI_Datatype)0x4c00080b)),((MPI_Op)(0x58000003)),(PetscObjectComm ((PetscObject)A)))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2495,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2496 | } |
2497 | ierr = PetscFree(work)((*PetscTrFree)((void*)(work),2497,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((work) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2497,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2498 | if (type == NORM_2) { |
2499 | for (i=0; i<N; i++) norms[i] = PetscSqrtReal(norms[i])sqrt(norms[i]); |
2500 | } |
2501 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2502 | } |
2503 | |
2504 | PetscErrorCode MatInvertBlockDiagonal_MPIBAIJ(Mat A,const PetscScalar **values) |
2505 | { |
2506 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*) A->data; |
2507 | PetscErrorCode ierr; |
2508 | |
2509 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2509; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2510 | ierr = MatInvertBlockDiagonal(a->A,values);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2510,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2511 | A->factorerrortype = a->A->factorerrortype; |
2512 | A->factorerror_zeropivot_value = a->A->factorerror_zeropivot_value; |
2513 | A->factorerror_zeropivot_row = a->A->factorerror_zeropivot_row; |
2514 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2515 | } |
2516 | |
2517 | PetscErrorCode MatShift_MPIBAIJ(Mat Y,PetscScalar a) |
2518 | { |
2519 | PetscErrorCode ierr; |
2520 | Mat_MPIBAIJ *maij = (Mat_MPIBAIJ*)Y->data; |
2521 | Mat_SeqBAIJ *aij = (Mat_SeqBAIJ*)maij->A->data; |
2522 | |
2523 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2523; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2524 | if (!Y->preallocated) { |
2525 | ierr = MatMPIBAIJSetPreallocation(Y,Y->rmap->bs,1,NULL((void*)0),0,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2525,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2526 | } else if (!aij->nz) { |
2527 | PetscInt nonew = aij->nonew; |
2528 | ierr = MatSeqBAIJSetPreallocation(maij->A,Y->rmap->bs,1,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2528,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2529 | aij->nonew = nonew; |
2530 | } |
2531 | ierr = MatShift_Basic(Y,a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2531,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2532 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2533 | } |
2534 | |
2535 | PetscErrorCode MatMissingDiagonal_MPIBAIJ(Mat A,PetscBool *missing,PetscInt *d) |
2536 | { |
2537 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data; |
2538 | PetscErrorCode ierr; |
2539 | |
2540 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2540; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2541 | if (A->rmap->n != A->cmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only works for square matrices")return PetscError(((MPI_Comm)0x44000001),2541,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,56,PETSC_ERROR_INITIAL,"Only works for square matrices"); |
2542 | ierr = MatMissingDiagonal(a->A,missing,d);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2542,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2543 | if (d) { |
2544 | PetscInt rstart; |
2545 | ierr = MatGetOwnershipRange(A,&rstart,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2545,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2546 | *d += rstart/A->rmap->bs; |
2547 | |
2548 | } |
2549 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2550 | } |
2551 | |
2552 | PetscErrorCode MatGetDiagonalBlock_MPIBAIJ(Mat A,Mat *a) |
2553 | { |
2554 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2554; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2555 | *a = ((Mat_MPIBAIJ*)A->data)->A; |
2556 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2557 | } |
2558 | |
2559 | /* -------------------------------------------------------------------*/ |
2560 | static struct _MatOps MatOps_Values = {MatSetValues_MPIBAIJ, |
2561 | MatGetRow_MPIBAIJ, |
2562 | MatRestoreRow_MPIBAIJ, |
2563 | MatMult_MPIBAIJ, |
2564 | /* 4*/ MatMultAdd_MPIBAIJ, |
2565 | MatMultTranspose_MPIBAIJ, |
2566 | MatMultTransposeAdd_MPIBAIJ, |
2567 | 0, |
2568 | 0, |
2569 | 0, |
2570 | /*10*/ 0, |
2571 | 0, |
2572 | 0, |
2573 | MatSOR_MPIBAIJ, |
2574 | MatTranspose_MPIBAIJ, |
2575 | /*15*/ MatGetInfo_MPIBAIJ, |
2576 | MatEqual_MPIBAIJ, |
2577 | MatGetDiagonal_MPIBAIJ, |
2578 | MatDiagonalScale_MPIBAIJ, |
2579 | MatNorm_MPIBAIJ, |
2580 | /*20*/ MatAssemblyBegin_MPIBAIJ, |
2581 | MatAssemblyEnd_MPIBAIJ, |
2582 | MatSetOption_MPIBAIJ, |
2583 | MatZeroEntries_MPIBAIJ, |
2584 | /*24*/ MatZeroRows_MPIBAIJ, |
2585 | 0, |
2586 | 0, |
2587 | 0, |
2588 | 0, |
2589 | /*29*/ MatSetUp_MPIBAIJ, |
2590 | 0, |
2591 | 0, |
2592 | MatGetDiagonalBlock_MPIBAIJ, |
2593 | 0, |
2594 | /*34*/ MatDuplicate_MPIBAIJ, |
2595 | 0, |
2596 | 0, |
2597 | 0, |
2598 | 0, |
2599 | /*39*/ MatAXPY_MPIBAIJ, |
2600 | MatCreateSubMatrices_MPIBAIJ, |
2601 | MatIncreaseOverlap_MPIBAIJ, |
2602 | MatGetValues_MPIBAIJ, |
2603 | MatCopy_MPIBAIJ, |
2604 | /*44*/ 0, |
2605 | MatScale_MPIBAIJ, |
2606 | MatShift_MPIBAIJ, |
2607 | 0, |
2608 | MatZeroRowsColumns_MPIBAIJ, |
2609 | /*49*/ 0, |
2610 | 0, |
2611 | 0, |
2612 | 0, |
2613 | 0, |
2614 | /*54*/ MatFDColoringCreate_MPIXAIJ, |
2615 | 0, |
2616 | MatSetUnfactored_MPIBAIJ, |
2617 | MatPermute_MPIBAIJ, |
2618 | MatSetValuesBlocked_MPIBAIJ, |
2619 | /*59*/ MatCreateSubMatrix_MPIBAIJ, |
2620 | MatDestroy_MPIBAIJ, |
2621 | MatView_MPIBAIJ, |
2622 | 0, |
2623 | 0, |
2624 | /*64*/ 0, |
2625 | 0, |
2626 | 0, |
2627 | 0, |
2628 | 0, |
2629 | /*69*/ MatGetRowMaxAbs_MPIBAIJ, |
2630 | 0, |
2631 | 0, |
2632 | 0, |
2633 | 0, |
2634 | /*74*/ 0, |
2635 | MatFDColoringApply_BAIJ, |
2636 | 0, |
2637 | 0, |
2638 | 0, |
2639 | /*79*/ 0, |
2640 | 0, |
2641 | 0, |
2642 | 0, |
2643 | MatLoad_MPIBAIJ, |
2644 | /*84*/ 0, |
2645 | 0, |
2646 | 0, |
2647 | 0, |
2648 | 0, |
2649 | /*89*/ 0, |
2650 | 0, |
2651 | 0, |
2652 | 0, |
2653 | 0, |
2654 | /*94*/ 0, |
2655 | 0, |
2656 | 0, |
2657 | 0, |
2658 | 0, |
2659 | /*99*/ 0, |
2660 | 0, |
2661 | 0, |
2662 | 0, |
2663 | 0, |
2664 | /*104*/0, |
2665 | MatRealPart_MPIBAIJ, |
2666 | MatImaginaryPart_MPIBAIJ, |
2667 | 0, |
2668 | 0, |
2669 | /*109*/0, |
2670 | 0, |
2671 | 0, |
2672 | 0, |
2673 | MatMissingDiagonal_MPIBAIJ, |
2674 | /*114*/MatGetSeqNonzeroStructure_MPIBAIJ, |
2675 | 0, |
2676 | MatGetGhosts_MPIBAIJ, |
2677 | 0, |
2678 | 0, |
2679 | /*119*/0, |
2680 | 0, |
2681 | 0, |
2682 | 0, |
2683 | MatGetMultiProcBlock_MPIBAIJ, |
2684 | /*124*/0, |
2685 | MatGetColumnNorms_MPIBAIJ, |
2686 | MatInvertBlockDiagonal_MPIBAIJ, |
2687 | 0, |
2688 | 0, |
2689 | /*129*/ 0, |
2690 | 0, |
2691 | 0, |
2692 | 0, |
2693 | 0, |
2694 | /*134*/ 0, |
2695 | 0, |
2696 | 0, |
2697 | 0, |
2698 | 0, |
2699 | /*139*/ MatSetBlockSizes_Default, |
2700 | 0, |
2701 | 0, |
2702 | MatFDColoringSetUp_MPIXAIJ, |
2703 | 0, |
2704 | /*144*/MatCreateMPIMatConcatenateSeqMat_MPIBAIJ |
2705 | }; |
2706 | |
2707 | |
2708 | PETSC_INTERNextern __attribute__((visibility ("hidden"))) PetscErrorCode MatConvert_MPIBAIJ_MPISBAIJ(Mat,MatType,MatReuse,Mat*); |
2709 | PETSC_INTERNextern __attribute__((visibility ("hidden"))) PetscErrorCode MatConvert_XAIJ_IS(Mat,MatType,MatReuse,Mat*); |
2710 | |
2711 | PetscErrorCode MatMPIBAIJSetPreallocationCSR_MPIBAIJ(Mat B,PetscInt bs,const PetscInt ii[],const PetscInt jj[],const PetscScalar V[]) |
2712 | { |
2713 | PetscInt m,rstart,cstart,cend; |
2714 | PetscInt i,j,dlen,olen,nz,nz_max=0,*d_nnz=0,*o_nnz=0; |
2715 | const PetscInt *JJ =0; |
2716 | PetscScalar *values=0; |
2717 | PetscBool roworiented = ((Mat_MPIBAIJ*)B->data)->roworiented; |
2718 | PetscErrorCode ierr; |
2719 | |
2720 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2720; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2721 | ierr = PetscLayoutSetBlockSize(B->rmap,bs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2721,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2722 | ierr = PetscLayoutSetBlockSize(B->cmap,bs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2722,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2723 | ierr = PetscLayoutSetUp(B->rmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2723,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2724 | ierr = PetscLayoutSetUp(B->cmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2724,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2725 | ierr = PetscLayoutGetBlockSize(B->rmap,&bs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2725,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2726 | m = B->rmap->n/bs; |
2727 | rstart = B->rmap->rstart/bs; |
2728 | cstart = B->cmap->rstart/bs; |
2729 | cend = B->cmap->rend/bs; |
2730 | |
2731 | if (ii[0]) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"ii[0] must be 0 but it is %D",ii[0])return PetscError(((MPI_Comm)0x44000001),2731,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"ii[0] must be 0 but it is %D",ii[0]); |
2732 | ierr = PetscMalloc2(m,&d_nnz,m,&o_nnz)PetscMallocA(2,PETSC_FALSE,2732,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(m)*sizeof(**(&d_nnz)),(&d_nnz),(size_t)(m)* sizeof(**(&o_nnz)),(&o_nnz));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2732,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2733 | for (i=0; i<m; i++) { |
2734 | nz = ii[i+1] - ii[i]; |
2735 | if (nz < 0) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Local row %D has a negative number of columns %D",i,nz)return PetscError(((MPI_Comm)0x44000001),2735,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Local row %D has a negative number of columns %D" ,i,nz); |
2736 | nz_max = PetscMax(nz_max,nz)(((nz_max)<(nz)) ? (nz) : (nz_max)); |
2737 | dlen = 0; |
2738 | olen = 0; |
2739 | JJ = jj + ii[i]; |
2740 | for (j=0; j<nz; j++) { |
2741 | if (*JJ < cstart || *JJ >= cend) olen++; |
2742 | else dlen++; |
2743 | JJ++; |
2744 | } |
2745 | d_nnz[i] = dlen; |
2746 | o_nnz[i] = olen; |
2747 | } |
2748 | ierr = MatMPIBAIJSetPreallocation(B,bs,0,d_nnz,0,o_nnz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2748,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2749 | ierr = PetscFree2(d_nnz,o_nnz)PetscFreeA(2,2749,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,&(d_nnz),&(o_nnz));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2749,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2750 | |
2751 | values = (PetscScalar*)V; |
2752 | if (!values) { |
2753 | ierr = PetscCalloc1(bs*bs*nz_max,&values)PetscMallocA(1,PETSC_TRUE,2753,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(bs*bs*nz_max)*sizeof(**(&values)),(&values) );CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2753,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2754 | } |
2755 | for (i=0; i<m; i++) { |
2756 | PetscInt row = i + rstart; |
2757 | PetscInt ncols = ii[i+1] - ii[i]; |
2758 | const PetscInt *icols = jj + ii[i]; |
2759 | if (bs == 1 || !roworiented) { /* block ordering matches the non-nested layout of MatSetValues so we can insert entire rows */ |
2760 | const PetscScalar *svals = values + (V ? (bs*bs*ii[i]) : 0); |
2761 | ierr = MatSetValuesBlocked_MPIBAIJ(B,1,&row,ncols,icols,svals,INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2761,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2762 | } else { /* block ordering does not match so we can only insert one block at a time. */ |
2763 | PetscInt j; |
2764 | for (j=0; j<ncols; j++) { |
2765 | const PetscScalar *svals = values + (V ? (bs*bs*(ii[i]+j)) : 0); |
2766 | ierr = MatSetValuesBlocked_MPIBAIJ(B,1,&row,1,&icols[j],svals,INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2766,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2767 | } |
2768 | } |
2769 | } |
2770 | |
2771 | if (!V) { ierr = PetscFree(values)((*PetscTrFree)((void*)(values),2771,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((values) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2771,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); } |
2772 | ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2772,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2773 | ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2773,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2774 | ierr = MatSetOption(B,MAT_NEW_NONZERO_LOCATION_ERR,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2774,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2775 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2776 | } |
2777 | |
2778 | /*@C |
2779 | MatMPIBAIJSetPreallocationCSR - Creates a sparse parallel matrix in BAIJ format using the given nonzero structure and (optional) numerical values |
2780 | |
2781 | Collective |
2782 | |
2783 | Input Parameters: |
2784 | + B - the matrix |
2785 | . bs - the block size |
2786 | . i - the indices into j for the start of each local row (starts with zero) |
2787 | . j - the column indices for each local row (starts with zero) these must be sorted for each row |
2788 | - v - optional values in the matrix |
2789 | |
2790 | Level: advanced |
2791 | |
2792 | Notes: |
2793 | The order of the entries in values is specified by the MatOption MAT_ROW_ORIENTED. For example, C programs |
2794 | may want to use the default MAT_ROW_ORIENTED=PETSC_TRUE and use an array v[nnz][bs][bs] where the second index is |
2795 | over rows within a block and the last index is over columns within a block row. Fortran programs will likely set |
2796 | MAT_ROW_ORIENTED=PETSC_FALSE and use a Fortran array v(bs,bs,nnz) in which the first index is over rows within a |
2797 | block column and the second index is over columns within a block. |
2798 | |
2799 | Though this routine has Preallocation() in the name it also sets the exact nonzero locations of the matrix entries and usually the numerical values as well |
2800 | |
2801 | .seealso: MatCreate(), MatCreateSeqAIJ(), MatSetValues(), MatMPIBAIJSetPreallocation(), MatCreateAIJ(), MPIAIJ, MatCreateMPIBAIJWithArrays(), MPIBAIJ |
2802 | @*/ |
2803 | PetscErrorCode MatMPIBAIJSetPreallocationCSR(Mat B,PetscInt bs,const PetscInt i[],const PetscInt j[], const PetscScalar v[]) |
2804 | { |
2805 | PetscErrorCode ierr; |
2806 | |
2807 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2807; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2808 | PetscValidHeaderSpecific(B,MAT_CLASSID,1)do { if (!B) return PetscError(((MPI_Comm)0x44000001),2808,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",1); if ( !PetscCheckPointer(B,PETSC_OBJECT)) return PetscError(((MPI_Comm )0x44000001),2808,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d" ,1); if (((PetscObject)(B))->classid != MAT_CLASSID) { if ( ((PetscObject)(B))->classid == -1) return PetscError(((MPI_Comm )0x44000001),2808,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d" ,1); else return PetscError(((MPI_Comm)0x44000001),2808,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,62,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d" ,1); } } while (0); |
2809 | PetscValidType(B,1)do { if (!((PetscObject)B)->type_name) return PetscError(( (MPI_Comm)0x44000001),2809,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,73,PETSC_ERROR_INITIAL,"%s object's type is not set: Argument # %d" ,((PetscObject)B)->class_name,1); } while (0); |
2810 | PetscValidLogicalCollectiveInt(B,bs,2)do { PetscErrorCode _7_ierr; PetscInt b1[2],b2[2]; b1[0] = -bs ; b1[1] = bs; _7_ierr = (PetscAllreduceBarrierCheck(PetscObjectComm ((PetscObject)B),2,2810,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm ((PetscObject)B))),0) || MPI_Allreduce((b1),(b2),(2),(((MPI_Datatype )0x4c000405)),((MPI_Op)(0x58000001)),(PetscObjectComm((PetscObject )B)))));do {if (__builtin_expect(!!(_7_ierr),0)) return PetscError (((MPI_Comm)0x44000001),2810,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_7_ierr,PETSC_ERROR_REPEAT," ");} while (0); if (-b2[0] != b2 [1]) return PetscError(PetscObjectComm((PetscObject)B),2810,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,62,PETSC_ERROR_INITIAL,"Int value must be same on all processes, argument # %d" ,2); } while (0); |
2811 | ierr = PetscTryMethod(B,"MatMPIBAIJSetPreallocationCSR_C",(Mat,PetscInt,const PetscInt[],const PetscInt[],const PetscScalar[]),(B,bs,i,j,v))0; do { PetscErrorCode (*_7_f)(Mat,PetscInt,const PetscInt[], const PetscInt[],const PetscScalar[]), _7_ierr; _7_ierr = PetscObjectQueryFunction_Private (((PetscObject)(B)),("MatMPIBAIJSetPreallocationCSR_C"),(PetscVoidFunction *)(&_7_f));do {if (__builtin_expect(!!(_7_ierr),0)) return PetscError(((MPI_Comm)0x44000001),2811,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_7_ierr,PETSC_ERROR_REPEAT," ");} while (0); if (_7_f) {_7_ierr = (*_7_f)(B,bs,i,j,v);do {if (__builtin_expect(!!(_7_ierr),0 )) return PetscError(((MPI_Comm)0x44000001),2811,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_7_ierr,PETSC_ERROR_REPEAT," ");} while (0);} } while(0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2811,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2812 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2813 | } |
2814 | |
2815 | PetscErrorCode MatMPIBAIJSetPreallocation_MPIBAIJ(Mat B,PetscInt bs,PetscInt d_nz,const PetscInt *d_nnz,PetscInt o_nz,const PetscInt *o_nnz) |
2816 | { |
2817 | Mat_MPIBAIJ *b; |
2818 | PetscErrorCode ierr; |
2819 | PetscInt i; |
2820 | PetscMPIInt size; |
2821 | |
2822 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2822; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2823 | ierr = MatSetBlockSize(B,PetscAbs(bs)(((bs) >= 0) ? (bs) : (-(bs))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2823,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2824 | ierr = PetscLayoutSetUp(B->rmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2824,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2825 | ierr = PetscLayoutSetUp(B->cmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2825,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2826 | ierr = PetscLayoutGetBlockSize(B->rmap,&bs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2826,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2827 | |
2828 | if (d_nnz) { |
2829 | for (i=0; i<B->rmap->n/bs; i++) { |
2830 | if (d_nnz[i] < 0) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"d_nnz cannot be less than -1: local row %D value %D",i,d_nnz[i])return PetscError(((MPI_Comm)0x44000001),2830,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"d_nnz cannot be less than -1: local row %D value %D" ,i,d_nnz[i]); |
2831 | } |
2832 | } |
2833 | if (o_nnz) { |
2834 | for (i=0; i<B->rmap->n/bs; i++) { |
2835 | if (o_nnz[i] < 0) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"o_nnz cannot be less than -1: local row %D value %D",i,o_nnz[i])return PetscError(((MPI_Comm)0x44000001),2835,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"o_nnz cannot be less than -1: local row %D value %D" ,i,o_nnz[i]); |
2836 | } |
2837 | } |
2838 | |
2839 | b = (Mat_MPIBAIJ*)B->data; |
2840 | b->bs2 = bs*bs; |
2841 | b->mbs = B->rmap->n/bs; |
2842 | b->nbs = B->cmap->n/bs; |
2843 | b->Mbs = B->rmap->N/bs; |
2844 | b->Nbs = B->cmap->N/bs; |
2845 | |
2846 | for (i=0; i<=b->size; i++) { |
2847 | b->rangebs[i] = B->rmap->range[i]/bs; |
2848 | } |
2849 | b->rstartbs = B->rmap->rstart/bs; |
2850 | b->rendbs = B->rmap->rend/bs; |
2851 | b->cstartbs = B->cmap->rstart/bs; |
2852 | b->cendbs = B->cmap->rend/bs; |
2853 | |
2854 | #if defined(PETSC_USE_CTABLE1) |
2855 | ierr = PetscTableDestroy(&b->colmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2855,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2856 | #else |
2857 | ierr = PetscFree(b->colmap)((*PetscTrFree)((void*)(b->colmap),2857,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((b->colmap) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2857,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2858 | #endif |
2859 | ierr = PetscFree(b->garray)((*PetscTrFree)((void*)(b->garray),2859,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((b->garray) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2859,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2860 | ierr = VecDestroy(&b->lvec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2860,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2861 | ierr = VecScatterDestroy(&b->Mvctx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2861,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2862 | |
2863 | /* Because the B will have been resized we simply destroy it and create a new one each time */ |
2864 | ierr = MPI_Comm_size(PetscObjectComm((PetscObject)B),&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2864,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2865 | ierr = MatDestroy(&b->B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2865,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2866 | ierr = MatCreate(PETSC_COMM_SELF((MPI_Comm)0x44000001),&b->B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2866,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2867 | ierr = MatSetSizes(b->B,B->rmap->n,size > 1 ? B->cmap->N : 0,B->rmap->n,size > 1 ? B->cmap->N : 0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2867,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2868 | ierr = MatSetType(b->B,MATSEQBAIJ"seqbaij");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2868,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2869 | ierr = PetscLogObjectParent((PetscObject)B,(PetscObject)b->B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2869,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2870 | |
2871 | if (!B->preallocated) { |
2872 | ierr = MatCreate(PETSC_COMM_SELF((MPI_Comm)0x44000001),&b->A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2872,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2873 | ierr = MatSetSizes(b->A,B->rmap->n,B->cmap->n,B->rmap->n,B->cmap->n);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2873,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2874 | ierr = MatSetType(b->A,MATSEQBAIJ"seqbaij");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2874,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2875 | ierr = PetscLogObjectParent((PetscObject)B,(PetscObject)b->A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2875,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2876 | ierr = MatStashCreate_Private(PetscObjectComm((PetscObject)B),bs,&B->bstash);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2876,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2877 | } |
2878 | |
2879 | ierr = MatSeqBAIJSetPreallocation(b->A,bs,d_nz,d_nnz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2879,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2880 | ierr = MatSeqBAIJSetPreallocation(b->B,bs,o_nz,o_nnz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2880,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2881 | B->preallocated = PETSC_TRUE; |
2882 | B->was_assembled = PETSC_FALSE; |
2883 | B->assembled = PETSC_FALSE; |
2884 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2885 | } |
2886 | |
2887 | extern PetscErrorCode MatDiagonalScaleLocal_MPIBAIJ(Mat,Vec); |
2888 | extern PetscErrorCode MatSetHashTableFactor_MPIBAIJ(Mat,PetscReal); |
2889 | |
2890 | PETSC_INTERNextern __attribute__((visibility ("hidden"))) PetscErrorCode MatConvert_MPIBAIJ_MPIAdj(Mat B, MatType newtype,MatReuse reuse,Mat *adj) |
2891 | { |
2892 | Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)B->data; |
2893 | PetscErrorCode ierr; |
2894 | Mat_SeqBAIJ *d = (Mat_SeqBAIJ*) b->A->data,*o = (Mat_SeqBAIJ*) b->B->data; |
2895 | PetscInt M = B->rmap->n/B->rmap->bs,i,*ii,*jj,cnt,j,k,rstart = B->rmap->rstart/B->rmap->bs; |
2896 | const PetscInt *id = d->i, *jd = d->j, *io = o->i, *jo = o->j, *garray = b->garray; |
2897 | |
2898 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2898; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2899 | ierr = PetscMalloc1(M+1,&ii)PetscMallocA(1,PETSC_FALSE,2899,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(M+1)*sizeof(**(&ii)),(&ii));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2899,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2900 | ii[0] = 0; |
2901 | for (i=0; i<M; i++) { |
2902 | if ((id[i+1] - id[i]) < 0) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Indices wrong %D %D %D",i,id[i],id[i+1])return PetscError(((MPI_Comm)0x44000001),2902,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,77,PETSC_ERROR_INITIAL,"Indices wrong %D %D %D",i,id[i],id[i +1]); |
2903 | if ((io[i+1] - io[i]) < 0) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Indices wrong %D %D %D",i,io[i],io[i+1])return PetscError(((MPI_Comm)0x44000001),2903,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,77,PETSC_ERROR_INITIAL,"Indices wrong %D %D %D",i,io[i],io[i +1]); |
2904 | ii[i+1] = ii[i] + id[i+1] - id[i] + io[i+1] - io[i]; |
2905 | /* remove one from count of matrix has diagonal */ |
2906 | for (j=id[i]; j<id[i+1]; j++) { |
2907 | if (jd[j] == i) {ii[i+1]--;break;} |
2908 | } |
2909 | } |
2910 | ierr = PetscMalloc1(ii[M],&jj)PetscMallocA(1,PETSC_FALSE,2910,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(ii[M])*sizeof(**(&jj)),(&jj));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2910,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2911 | cnt = 0; |
2912 | for (i=0; i<M; i++) { |
2913 | for (j=io[i]; j<io[i+1]; j++) { |
2914 | if (garray[jo[j]] > rstart) break; |
2915 | jj[cnt++] = garray[jo[j]]; |
2916 | } |
2917 | for (k=id[i]; k<id[i+1]; k++) { |
2918 | if (jd[k] != i) { |
2919 | jj[cnt++] = rstart + jd[k]; |
2920 | } |
2921 | } |
2922 | for (; j<io[i+1]; j++) { |
2923 | jj[cnt++] = garray[jo[j]]; |
2924 | } |
2925 | } |
2926 | ierr = MatCreateMPIAdj(PetscObjectComm((PetscObject)B),M,B->cmap->N/B->rmap->bs,ii,jj,NULL((void*)0),adj);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2926,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2927 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2928 | } |
2929 | |
2930 | #include <../src/mat/impls/aij/mpi/mpiaij.h> |
2931 | |
2932 | PETSC_INTERNextern __attribute__((visibility ("hidden"))) PetscErrorCode MatConvert_SeqBAIJ_SeqAIJ(Mat,MatType,MatReuse,Mat*); |
2933 | |
2934 | PETSC_INTERNextern __attribute__((visibility ("hidden"))) PetscErrorCode MatConvert_MPIBAIJ_MPIAIJ(Mat A,MatType newtype,MatReuse reuse,Mat *newmat) |
2935 | { |
2936 | PetscErrorCode ierr; |
2937 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data; |
2938 | Mat B; |
2939 | Mat_MPIAIJ *b; |
2940 | |
2941 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 2941; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
2942 | if (!A->assembled) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Matrix must be assembled")return PetscError(PetscObjectComm((PetscObject)A),2942,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,56,PETSC_ERROR_INITIAL,"Matrix must be assembled"); |
2943 | |
2944 | if (reuse == MAT_REUSE_MATRIX) { |
2945 | B = *newmat; |
2946 | } else { |
2947 | ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2947,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2948 | ierr = MatSetType(B,MATMPIAIJ"mpiaij");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2948,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2949 | ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2949,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2950 | ierr = MatSetBlockSizes(B,A->rmap->bs,A->cmap->bs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2950,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2951 | ierr = MatSeqAIJSetPreallocation(B,0,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2951,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2952 | ierr = MatMPIAIJSetPreallocation(B,0,NULL((void*)0),0,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2952,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2953 | } |
2954 | b = (Mat_MPIAIJ*) B->data; |
2955 | |
2956 | if (reuse == MAT_REUSE_MATRIX) { |
2957 | ierr = MatConvert_SeqBAIJ_SeqAIJ(a->A, MATSEQAIJ"seqaij", MAT_REUSE_MATRIX, &b->A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2957,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2958 | ierr = MatConvert_SeqBAIJ_SeqAIJ(a->B, MATSEQAIJ"seqaij", MAT_REUSE_MATRIX, &b->B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2958,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2959 | } else { |
2960 | ierr = MatDestroy(&b->A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2960,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2961 | ierr = MatDestroy(&b->B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2961,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2962 | ierr = MatDisAssemble_MPIBAIJ(A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2962,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2963 | ierr = MatConvert_SeqBAIJ_SeqAIJ(a->A, MATSEQAIJ"seqaij", MAT_INITIAL_MATRIX, &b->A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2963,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2964 | ierr = MatConvert_SeqBAIJ_SeqAIJ(a->B, MATSEQAIJ"seqaij", MAT_INITIAL_MATRIX, &b->B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2964,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2965 | ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2965,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2966 | ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2966,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2967 | } |
2968 | ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2968,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2969 | ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2969,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2970 | |
2971 | if (reuse == MAT_INPLACE_MATRIX) { |
2972 | ierr = MatHeaderReplace(A,&B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),2972,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
2973 | } else { |
2974 | *newmat = B; |
2975 | } |
2976 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
2977 | } |
2978 | |
2979 | /*MC |
2980 | MATMPIBAIJ - MATMPIBAIJ = "mpibaij" - A matrix type to be used for distributed block sparse matrices. |
2981 | |
2982 | Options Database Keys: |
2983 | + -mat_type mpibaij - sets the matrix type to "mpibaij" during a call to MatSetFromOptions() |
2984 | . -mat_block_size <bs> - set the blocksize used to store the matrix |
2985 | - -mat_use_hash_table <fact> |
2986 | |
2987 | Level: beginner |
2988 | |
2989 | Notes: |
2990 | MatSetOptions(,MAT_STRUCTURE_ONLY,PETSC_TRUE) may be called for this matrix type. In this no |
2991 | space is allocated for the nonzero entries and any entries passed with MatSetValues() are ignored |
2992 | |
2993 | .seealso: MatCreateMPIBAIJ |
2994 | M*/ |
2995 | |
2996 | PETSC_INTERNextern __attribute__((visibility ("hidden"))) PetscErrorCode MatConvert_MPIBAIJ_MPIBSTRM(Mat,MatType,MatReuse,Mat*); |
2997 | PETSC_INTERNextern __attribute__((visibility ("hidden"))) PetscErrorCode MatPtAP_IS_XAIJ(Mat,Mat,MatReuse,PetscReal,Mat*); |
2998 | |
2999 | PETSC_EXTERNextern __attribute__((visibility ("default"))) PetscErrorCode MatCreate_MPIBAIJ(Mat B) |
3000 | { |
3001 | Mat_MPIBAIJ *b; |
3002 | PetscErrorCode ierr; |
3003 | PetscBool flg = PETSC_FALSE; |
3004 | |
3005 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 3005; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
3006 | ierr = PetscNewLog(B,&b)(PetscMallocA(1,PETSC_TRUE,3006,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(1)*sizeof(**(((&b)))),(((&b)))) || PetscLogObjectMemory ((PetscObject)B,sizeof(**(&b))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3006,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3007 | B->data = (void*)b; |
3008 | |
3009 | ierr = PetscMemcpy(B->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3009,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3010 | B->assembled = PETSC_FALSE; |
3011 | |
3012 | B->insertmode = NOT_SET_VALUES; |
3013 | ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)B),&b->rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3013,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3014 | ierr = MPI_Comm_size(PetscObjectComm((PetscObject)B),&b->size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3014,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3015 | |
3016 | /* build local table of row and column ownerships */ |
3017 | ierr = PetscMalloc1(b->size+1,&b->rangebs)PetscMallocA(1,PETSC_FALSE,3017,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(b->size+1)*sizeof(**(&b->rangebs)),(& b->rangebs));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3017,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3018 | |
3019 | /* build cache for off array entries formed */ |
3020 | ierr = MatStashCreate_Private(PetscObjectComm((PetscObject)B),1,&B->stash);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3020,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3021 | |
3022 | b->donotstash = PETSC_FALSE; |
3023 | b->colmap = NULL((void*)0); |
3024 | b->garray = NULL((void*)0); |
3025 | b->roworiented = PETSC_TRUE; |
3026 | |
3027 | /* stuff used in block assembly */ |
3028 | b->barray = 0; |
3029 | |
3030 | /* stuff used for matrix vector multiply */ |
3031 | b->lvec = 0; |
3032 | b->Mvctx = 0; |
3033 | |
3034 | /* stuff for MatGetRow() */ |
3035 | b->rowindices = 0; |
3036 | b->rowvalues = 0; |
3037 | b->getrowactive = PETSC_FALSE; |
3038 | |
3039 | /* hash table stuff */ |
3040 | b->ht = 0; |
3041 | b->hd = 0; |
3042 | b->ht_size = 0; |
3043 | b->ht_flag = PETSC_FALSE; |
3044 | b->ht_fact = 0; |
3045 | b->ht_total_ct = 0; |
3046 | b->ht_insert_ct = 0; |
3047 | |
3048 | /* stuff for MatCreateSubMatrices_MPIBAIJ_local() */ |
3049 | b->ijonly = PETSC_FALSE; |
3050 | |
3051 | |
3052 | ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpibaij_mpiadj_C",MatConvert_MPIBAIJ_MPIAdj)PetscObjectComposeFunction_Private((PetscObject)B,"MatConvert_mpibaij_mpiadj_C" ,(PetscVoidFunction)(MatConvert_MPIBAIJ_MPIAdj));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3052,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3053 | ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpibaij_mpiaij_C",MatConvert_MPIBAIJ_MPIAIJ)PetscObjectComposeFunction_Private((PetscObject)B,"MatConvert_mpibaij_mpiaij_C" ,(PetscVoidFunction)(MatConvert_MPIBAIJ_MPIAIJ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3053,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3054 | ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpibaij_mpisbaij_C",MatConvert_MPIBAIJ_MPISBAIJ)PetscObjectComposeFunction_Private((PetscObject)B,"MatConvert_mpibaij_mpisbaij_C" ,(PetscVoidFunction)(MatConvert_MPIBAIJ_MPISBAIJ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3054,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3055 | #if defined(PETSC_HAVE_HYPRE) |
3056 | ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpibaij_hypre_C",MatConvert_AIJ_HYPRE)PetscObjectComposeFunction_Private((PetscObject)B,"MatConvert_mpibaij_hypre_C" ,(PetscVoidFunction)(MatConvert_AIJ_HYPRE));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3056,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3057 | #endif |
3058 | ierr = PetscObjectComposeFunction((PetscObject)B,"MatStoreValues_C",MatStoreValues_MPIBAIJ)PetscObjectComposeFunction_Private((PetscObject)B,"MatStoreValues_C" ,(PetscVoidFunction)(MatStoreValues_MPIBAIJ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3058,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3059 | ierr = PetscObjectComposeFunction((PetscObject)B,"MatRetrieveValues_C",MatRetrieveValues_MPIBAIJ)PetscObjectComposeFunction_Private((PetscObject)B,"MatRetrieveValues_C" ,(PetscVoidFunction)(MatRetrieveValues_MPIBAIJ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3059,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3060 | ierr = PetscObjectComposeFunction((PetscObject)B,"MatMPIBAIJSetPreallocation_C",MatMPIBAIJSetPreallocation_MPIBAIJ)PetscObjectComposeFunction_Private((PetscObject)B,"MatMPIBAIJSetPreallocation_C" ,(PetscVoidFunction)(MatMPIBAIJSetPreallocation_MPIBAIJ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3060,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3061 | ierr = PetscObjectComposeFunction((PetscObject)B,"MatMPIBAIJSetPreallocationCSR_C",MatMPIBAIJSetPreallocationCSR_MPIBAIJ)PetscObjectComposeFunction_Private((PetscObject)B,"MatMPIBAIJSetPreallocationCSR_C" ,(PetscVoidFunction)(MatMPIBAIJSetPreallocationCSR_MPIBAIJ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3061,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3062 | ierr = PetscObjectComposeFunction((PetscObject)B,"MatDiagonalScaleLocal_C",MatDiagonalScaleLocal_MPIBAIJ)PetscObjectComposeFunction_Private((PetscObject)B,"MatDiagonalScaleLocal_C" ,(PetscVoidFunction)(MatDiagonalScaleLocal_MPIBAIJ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3062,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3063 | ierr = PetscObjectComposeFunction((PetscObject)B,"MatSetHashTableFactor_C",MatSetHashTableFactor_MPIBAIJ)PetscObjectComposeFunction_Private((PetscObject)B,"MatSetHashTableFactor_C" ,(PetscVoidFunction)(MatSetHashTableFactor_MPIBAIJ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3063,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3064 | ierr = PetscObjectComposeFunction((PetscObject)B,"MatPtAP_is_mpibaij_C",MatPtAP_IS_XAIJ)PetscObjectComposeFunction_Private((PetscObject)B,"MatPtAP_is_mpibaij_C" ,(PetscVoidFunction)(MatPtAP_IS_XAIJ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3064,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3065 | ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpibaij_is_C",MatConvert_XAIJ_IS)PetscObjectComposeFunction_Private((PetscObject)B,"MatConvert_mpibaij_is_C" ,(PetscVoidFunction)(MatConvert_XAIJ_IS));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3065,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3066 | ierr = PetscObjectChangeTypeName((PetscObject)B,MATMPIBAIJ"mpibaij");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3066,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3067 | |
3068 | ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)B),NULL,"Options for loading MPIBAIJ matrix 1","Mat")0; do { PetscOptionItems PetscOptionsObjectBase; PetscOptionItems *PetscOptionsObject = &PetscOptionsObjectBase; PetscMemzero (PetscOptionsObject,sizeof(PetscOptionItems)); for (PetscOptionsObject ->count=(PetscOptionsPublish?-1:1); PetscOptionsObject-> count<2; PetscOptionsObject->count++) { PetscErrorCode _5_ierr = PetscOptionsBegin_Private(PetscOptionsObject,PetscObjectComm ((PetscObject)B),((void*)0),"Options for loading MPIBAIJ matrix 1" ,"Mat");do {if (__builtin_expect(!!(_5_ierr),0)) return PetscError (((MPI_Comm)0x44000001),3068,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_5_ierr,PETSC_ERROR_REPEAT," ");} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3068,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3069 | ierr = PetscOptionsName("-mat_use_hash_table","Use hash table to save time in constructing matrix","MatSetOption",&flg)PetscOptionsName_Private(PetscOptionsObject,"-mat_use_hash_table" ,"Use hash table to save time in constructing matrix","MatSetOption" ,&flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3069,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3070 | if (flg) { |
3071 | PetscReal fact = 1.39; |
3072 | ierr = MatSetOption(B,MAT_USE_HASH_TABLE,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3072,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3073 | ierr = PetscOptionsReal("-mat_use_hash_table","Use hash table factor","MatMPIBAIJSetHashTableFactor",fact,&fact,NULL)PetscOptionsReal_Private(PetscOptionsObject,"-mat_use_hash_table" ,"Use hash table factor","MatMPIBAIJSetHashTableFactor",fact, &fact,((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3073,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3074 | if (fact <= 1.0) fact = 1.39; |
3075 | ierr = MatMPIBAIJSetHashTableFactor(B,fact);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3075,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3076 | ierr = PetscInfo1(B,"Hash table Factor used %5.2f\n",fact)PetscInfo_Private(__func__,B,"Hash table Factor used %5.2f\n" ,fact);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3076,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3077 | } |
3078 | ierr = PetscOptionsEnd()_5_ierr = PetscOptionsEnd_Private(PetscOptionsObject);do {if ( __builtin_expect(!!(_5_ierr),0)) return PetscError(((MPI_Comm )0x44000001),3078,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_5_ierr,PETSC_ERROR_REPEAT," ");} while (0);}} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3078,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3079 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
3080 | } |
3081 | |
3082 | /*MC |
3083 | MATBAIJ - MATBAIJ = "baij" - A matrix type to be used for block sparse matrices. |
3084 | |
3085 | This matrix type is identical to MATSEQBAIJ when constructed with a single process communicator, |
3086 | and MATMPIBAIJ otherwise. |
3087 | |
3088 | Options Database Keys: |
3089 | . -mat_type baij - sets the matrix type to "baij" during a call to MatSetFromOptions() |
3090 | |
3091 | Level: beginner |
3092 | |
3093 | .seealso: MatCreateBAIJ(),MATSEQBAIJ,MATMPIBAIJ, MatMPIBAIJSetPreallocation(), MatMPIBAIJSetPreallocationCSR() |
3094 | M*/ |
3095 | |
3096 | /*@C |
3097 | MatMPIBAIJSetPreallocation - Allocates memory for a sparse parallel matrix in block AIJ format |
3098 | (block compressed row). For good matrix assembly performance |
3099 | the user should preallocate the matrix storage by setting the parameters |
3100 | d_nz (or d_nnz) and o_nz (or o_nnz). By setting these parameters accurately, |
3101 | performance can be increased by more than a factor of 50. |
3102 | |
3103 | Collective on Mat |
3104 | |
3105 | Input Parameters: |
3106 | + B - the matrix |
3107 | . bs - size of block, the blocks are ALWAYS square. One can use MatSetBlockSizes() to set a different row and column blocksize but the row |
3108 | blocksize always defines the size of the blocks. The column blocksize sets the blocksize of the vectors obtained with MatCreateVecs() |
3109 | . d_nz - number of block nonzeros per block row in diagonal portion of local |
3110 | submatrix (same for all local rows) |
3111 | . d_nnz - array containing the number of block nonzeros in the various block rows |
3112 | of the in diagonal portion of the local (possibly different for each block |
3113 | row) or NULL. If you plan to factor the matrix you must leave room for the diagonal entry and |
3114 | set it even if it is zero. |
3115 | . o_nz - number of block nonzeros per block row in the off-diagonal portion of local |
3116 | submatrix (same for all local rows). |
3117 | - o_nnz - array containing the number of nonzeros in the various block rows of the |
3118 | off-diagonal portion of the local submatrix (possibly different for |
3119 | each block row) or NULL. |
3120 | |
3121 | If the *_nnz parameter is given then the *_nz parameter is ignored |
3122 | |
3123 | Options Database Keys: |
3124 | + -mat_block_size - size of the blocks to use |
3125 | - -mat_use_hash_table <fact> |
3126 | |
3127 | Notes: |
3128 | If PETSC_DECIDE or PETSC_DETERMINE is used for a particular argument on one processor |
3129 | than it must be used on all processors that share the object for that argument. |
3130 | |
3131 | Storage Information: |
3132 | For a square global matrix we define each processor's diagonal portion |
3133 | to be its local rows and the corresponding columns (a square submatrix); |
3134 | each processor's off-diagonal portion encompasses the remainder of the |
3135 | local matrix (a rectangular submatrix). |
3136 | |
3137 | The user can specify preallocated storage for the diagonal part of |
3138 | the local submatrix with either d_nz or d_nnz (not both). Set |
3139 | d_nz=PETSC_DEFAULT and d_nnz=NULL for PETSc to control dynamic |
3140 | memory allocation. Likewise, specify preallocated storage for the |
3141 | off-diagonal part of the local submatrix with o_nz or o_nnz (not both). |
3142 | |
3143 | Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In |
3144 | the figure below we depict these three local rows and all columns (0-11). |
3145 | |
3146 | .vb |
3147 | 0 1 2 3 4 5 6 7 8 9 10 11 |
3148 | -------------------------- |
3149 | row 3 |o o o d d d o o o o o o |
3150 | row 4 |o o o d d d o o o o o o |
3151 | row 5 |o o o d d d o o o o o o |
3152 | -------------------------- |
3153 | .ve |
3154 | |
3155 | Thus, any entries in the d locations are stored in the d (diagonal) |
3156 | submatrix, and any entries in the o locations are stored in the |
3157 | o (off-diagonal) submatrix. Note that the d and the o submatrices are |
3158 | stored simply in the MATSEQBAIJ format for compressed row storage. |
3159 | |
3160 | Now d_nz should indicate the number of block nonzeros per row in the d matrix, |
3161 | and o_nz should indicate the number of block nonzeros per row in the o matrix. |
3162 | In general, for PDE problems in which most nonzeros are near the diagonal, |
3163 | one expects d_nz >> o_nz. For large problems you MUST preallocate memory |
3164 | or you will get TERRIBLE performance; see the users' manual chapter on |
3165 | matrices. |
3166 | |
3167 | You can call MatGetInfo() to get information on how effective the preallocation was; |
3168 | for example the fields mallocs,nz_allocated,nz_used,nz_unneeded; |
3169 | You can also run with the option -info and look for messages with the string |
3170 | malloc in them to see if additional memory allocation was needed. |
3171 | |
3172 | Level: intermediate |
3173 | |
3174 | .seealso: MatCreate(), MatCreateSeqBAIJ(), MatSetValues(), MatCreateBAIJ(), MatMPIBAIJSetPreallocationCSR(), PetscSplitOwnership() |
3175 | @*/ |
3176 | PetscErrorCode MatMPIBAIJSetPreallocation(Mat B,PetscInt bs,PetscInt d_nz,const PetscInt d_nnz[],PetscInt o_nz,const PetscInt o_nnz[]) |
3177 | { |
3178 | PetscErrorCode ierr; |
3179 | |
3180 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 3180; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
3181 | PetscValidHeaderSpecific(B,MAT_CLASSID,1)do { if (!B) return PetscError(((MPI_Comm)0x44000001),3181,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,85,PETSC_ERROR_INITIAL,"Null Object: Parameter # %d",1); if ( !PetscCheckPointer(B,PETSC_OBJECT)) return PetscError(((MPI_Comm )0x44000001),3181,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,64,PETSC_ERROR_INITIAL,"Invalid Pointer to Object: Parameter # %d" ,1); if (((PetscObject)(B))->classid != MAT_CLASSID) { if ( ((PetscObject)(B))->classid == -1) return PetscError(((MPI_Comm )0x44000001),3181,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,64,PETSC_ERROR_INITIAL,"Object already free: Parameter # %d" ,1); else return PetscError(((MPI_Comm)0x44000001),3181,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,62,PETSC_ERROR_INITIAL,"Wrong type of object: Parameter # %d" ,1); } } while (0); |
3182 | PetscValidType(B,1)do { if (!((PetscObject)B)->type_name) return PetscError(( (MPI_Comm)0x44000001),3182,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,73,PETSC_ERROR_INITIAL,"%s object's type is not set: Argument # %d" ,((PetscObject)B)->class_name,1); } while (0); |
3183 | PetscValidLogicalCollectiveInt(B,bs,2)do { PetscErrorCode _7_ierr; PetscInt b1[2],b2[2]; b1[0] = -bs ; b1[1] = bs; _7_ierr = (PetscAllreduceBarrierCheck(PetscObjectComm ((PetscObject)B),2,3183,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((petsc_allreduce_ct += PetscMPIParallelComm((PetscObjectComm ((PetscObject)B))),0) || MPI_Allreduce((b1),(b2),(2),(((MPI_Datatype )0x4c000405)),((MPI_Op)(0x58000001)),(PetscObjectComm((PetscObject )B)))));do {if (__builtin_expect(!!(_7_ierr),0)) return PetscError (((MPI_Comm)0x44000001),3183,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_7_ierr,PETSC_ERROR_REPEAT," ");} while (0); if (-b2[0] != b2 [1]) return PetscError(PetscObjectComm((PetscObject)B),3183,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,62,PETSC_ERROR_INITIAL,"Int value must be same on all processes, argument # %d" ,2); } while (0); |
3184 | ierr = PetscTryMethod(B,"MatMPIBAIJSetPreallocation_C",(Mat,PetscInt,PetscInt,const PetscInt[],PetscInt,const PetscInt[]),(B,bs,d_nz,d_nnz,o_nz,o_nnz))0; do { PetscErrorCode (*_7_f)(Mat,PetscInt,PetscInt,const PetscInt [],PetscInt,const PetscInt[]), _7_ierr; _7_ierr = PetscObjectQueryFunction_Private (((PetscObject)(B)),("MatMPIBAIJSetPreallocation_C"),(PetscVoidFunction *)(&_7_f));do {if (__builtin_expect(!!(_7_ierr),0)) return PetscError(((MPI_Comm)0x44000001),3184,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_7_ierr,PETSC_ERROR_REPEAT," ");} while (0); if (_7_f) {_7_ierr = (*_7_f)(B,bs,d_nz,d_nnz,o_nz,o_nnz);do {if (__builtin_expect (!!(_7_ierr),0)) return PetscError(((MPI_Comm)0x44000001),3184 ,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_7_ierr,PETSC_ERROR_REPEAT," ");} while (0);} } while(0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3184,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3185 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
3186 | } |
3187 | |
3188 | /*@C |
3189 | MatCreateBAIJ - Creates a sparse parallel matrix in block AIJ format |
3190 | (block compressed row). For good matrix assembly performance |
3191 | the user should preallocate the matrix storage by setting the parameters |
3192 | d_nz (or d_nnz) and o_nz (or o_nnz). By setting these parameters accurately, |
3193 | performance can be increased by more than a factor of 50. |
3194 | |
3195 | Collective |
3196 | |
3197 | Input Parameters: |
3198 | + comm - MPI communicator |
3199 | . bs - size of block, the blocks are ALWAYS square. One can use MatSetBlockSizes() to set a different row and column blocksize but the row |
3200 | blocksize always defines the size of the blocks. The column blocksize sets the blocksize of the vectors obtained with MatCreateVecs() |
3201 | . m - number of local rows (or PETSC_DECIDE to have calculated if M is given) |
3202 | This value should be the same as the local size used in creating the |
3203 | y vector for the matrix-vector product y = Ax. |
3204 | . n - number of local columns (or PETSC_DECIDE to have calculated if N is given) |
3205 | This value should be the same as the local size used in creating the |
3206 | x vector for the matrix-vector product y = Ax. |
3207 | . M - number of global rows (or PETSC_DETERMINE to have calculated if m is given) |
3208 | . N - number of global columns (or PETSC_DETERMINE to have calculated if n is given) |
3209 | . d_nz - number of nonzero blocks per block row in diagonal portion of local |
3210 | submatrix (same for all local rows) |
3211 | . d_nnz - array containing the number of nonzero blocks in the various block rows |
3212 | of the in diagonal portion of the local (possibly different for each block |
3213 | row) or NULL. If you plan to factor the matrix you must leave room for the diagonal entry |
3214 | and set it even if it is zero. |
3215 | . o_nz - number of nonzero blocks per block row in the off-diagonal portion of local |
3216 | submatrix (same for all local rows). |
3217 | - o_nnz - array containing the number of nonzero blocks in the various block rows of the |
3218 | off-diagonal portion of the local submatrix (possibly different for |
3219 | each block row) or NULL. |
3220 | |
3221 | Output Parameter: |
3222 | . A - the matrix |
3223 | |
3224 | Options Database Keys: |
3225 | + -mat_block_size - size of the blocks to use |
3226 | - -mat_use_hash_table <fact> |
3227 | |
3228 | It is recommended that one use the MatCreate(), MatSetType() and/or MatSetFromOptions(), |
3229 | MatXXXXSetPreallocation() paradigm instead of this routine directly. |
3230 | [MatXXXXSetPreallocation() is, for example, MatSeqAIJSetPreallocation] |
3231 | |
3232 | Notes: |
3233 | If the *_nnz parameter is given then the *_nz parameter is ignored |
3234 | |
3235 | A nonzero block is any block that as 1 or more nonzeros in it |
3236 | |
3237 | The user MUST specify either the local or global matrix dimensions |
3238 | (possibly both). |
3239 | |
3240 | If PETSC_DECIDE or PETSC_DETERMINE is used for a particular argument on one processor |
3241 | than it must be used on all processors that share the object for that argument. |
3242 | |
3243 | Storage Information: |
3244 | For a square global matrix we define each processor's diagonal portion |
3245 | to be its local rows and the corresponding columns (a square submatrix); |
3246 | each processor's off-diagonal portion encompasses the remainder of the |
3247 | local matrix (a rectangular submatrix). |
3248 | |
3249 | The user can specify preallocated storage for the diagonal part of |
3250 | the local submatrix with either d_nz or d_nnz (not both). Set |
3251 | d_nz=PETSC_DEFAULT and d_nnz=NULL for PETSc to control dynamic |
3252 | memory allocation. Likewise, specify preallocated storage for the |
3253 | off-diagonal part of the local submatrix with o_nz or o_nnz (not both). |
3254 | |
3255 | Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In |
3256 | the figure below we depict these three local rows and all columns (0-11). |
3257 | |
3258 | .vb |
3259 | 0 1 2 3 4 5 6 7 8 9 10 11 |
3260 | -------------------------- |
3261 | row 3 |o o o d d d o o o o o o |
3262 | row 4 |o o o d d d o o o o o o |
3263 | row 5 |o o o d d d o o o o o o |
3264 | -------------------------- |
3265 | .ve |
3266 | |
3267 | Thus, any entries in the d locations are stored in the d (diagonal) |
3268 | submatrix, and any entries in the o locations are stored in the |
3269 | o (off-diagonal) submatrix. Note that the d and the o submatrices are |
3270 | stored simply in the MATSEQBAIJ format for compressed row storage. |
3271 | |
3272 | Now d_nz should indicate the number of block nonzeros per row in the d matrix, |
3273 | and o_nz should indicate the number of block nonzeros per row in the o matrix. |
3274 | In general, for PDE problems in which most nonzeros are near the diagonal, |
3275 | one expects d_nz >> o_nz. For large problems you MUST preallocate memory |
3276 | or you will get TERRIBLE performance; see the users' manual chapter on |
3277 | matrices. |
3278 | |
3279 | Level: intermediate |
3280 | |
3281 | .seealso: MatCreate(), MatCreateSeqBAIJ(), MatSetValues(), MatCreateBAIJ(), MatMPIBAIJSetPreallocation(), MatMPIBAIJSetPreallocationCSR() |
3282 | @*/ |
3283 | PetscErrorCode MatCreateBAIJ(MPI_Comm comm,PetscInt bs,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscInt d_nz,const PetscInt d_nnz[],PetscInt o_nz,const PetscInt o_nnz[],Mat *A) |
3284 | { |
3285 | PetscErrorCode ierr; |
3286 | PetscMPIInt size; |
3287 | |
3288 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 3288; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
3289 | ierr = MatCreate(comm,A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3289,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3290 | ierr = MatSetSizes(*A,m,n,M,N);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3290,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3291 | ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3291,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3292 | if (size > 1) { |
3293 | ierr = MatSetType(*A,MATMPIBAIJ"mpibaij");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3293,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3294 | ierr = MatMPIBAIJSetPreallocation(*A,bs,d_nz,d_nnz,o_nz,o_nnz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3294,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3295 | } else { |
3296 | ierr = MatSetType(*A,MATSEQBAIJ"seqbaij");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3296,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3297 | ierr = MatSeqBAIJSetPreallocation(*A,bs,d_nz,d_nnz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3297,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3298 | } |
3299 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
3300 | } |
3301 | |
3302 | static PetscErrorCode MatDuplicate_MPIBAIJ(Mat matin,MatDuplicateOption cpvalues,Mat *newmat) |
3303 | { |
3304 | Mat mat; |
3305 | Mat_MPIBAIJ *a,*oldmat = (Mat_MPIBAIJ*)matin->data; |
3306 | PetscErrorCode ierr; |
3307 | PetscInt len=0; |
3308 | |
3309 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 3309; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
3310 | *newmat = 0; |
3311 | ierr = MatCreate(PetscObjectComm((PetscObject)matin),&mat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3311,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3312 | ierr = MatSetSizes(mat,matin->rmap->n,matin->cmap->n,matin->rmap->N,matin->cmap->N);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3312,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3313 | ierr = MatSetType(mat,((PetscObject)matin)->type_name);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3313,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3314 | |
3315 | mat->factortype = matin->factortype; |
3316 | mat->preallocated = PETSC_TRUE; |
3317 | mat->assembled = PETSC_TRUE; |
3318 | mat->insertmode = NOT_SET_VALUES; |
3319 | |
3320 | a = (Mat_MPIBAIJ*)mat->data; |
3321 | mat->rmap->bs = matin->rmap->bs; |
3322 | a->bs2 = oldmat->bs2; |
3323 | a->mbs = oldmat->mbs; |
3324 | a->nbs = oldmat->nbs; |
3325 | a->Mbs = oldmat->Mbs; |
3326 | a->Nbs = oldmat->Nbs; |
3327 | |
3328 | ierr = PetscLayoutReference(matin->rmap,&mat->rmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3328,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3329 | ierr = PetscLayoutReference(matin->cmap,&mat->cmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3329,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3330 | |
3331 | a->size = oldmat->size; |
3332 | a->rank = oldmat->rank; |
3333 | a->donotstash = oldmat->donotstash; |
3334 | a->roworiented = oldmat->roworiented; |
3335 | a->rowindices = 0; |
3336 | a->rowvalues = 0; |
3337 | a->getrowactive = PETSC_FALSE; |
3338 | a->barray = 0; |
3339 | a->rstartbs = oldmat->rstartbs; |
3340 | a->rendbs = oldmat->rendbs; |
3341 | a->cstartbs = oldmat->cstartbs; |
3342 | a->cendbs = oldmat->cendbs; |
3343 | |
3344 | /* hash table stuff */ |
3345 | a->ht = 0; |
3346 | a->hd = 0; |
3347 | a->ht_size = 0; |
3348 | a->ht_flag = oldmat->ht_flag; |
3349 | a->ht_fact = oldmat->ht_fact; |
3350 | a->ht_total_ct = 0; |
3351 | a->ht_insert_ct = 0; |
3352 | |
3353 | ierr = PetscArraycpy(a->rangebs,oldmat->rangebs,a->size+1)((sizeof(*(a->rangebs)) != sizeof(*(oldmat->rangebs))) || PetscMemcpy(a->rangebs,oldmat->rangebs,(a->size+1)* sizeof(*(a->rangebs))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3353,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3354 | if (oldmat->colmap) { |
3355 | #if defined(PETSC_USE_CTABLE1) |
3356 | ierr = PetscTableCreateCopy(oldmat->colmap,&a->colmap);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3356,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3357 | #else |
3358 | ierr = PetscMalloc1(a->Nbs,&a->colmap)PetscMallocA(1,PETSC_FALSE,3358,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(a->Nbs)*sizeof(**(&a->colmap)),(&a-> colmap));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3358,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3359 | ierr = PetscLogObjectMemory((PetscObject)mat,(a->Nbs)*sizeof(PetscInt));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3359,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3360 | ierr = PetscArraycpy(a->colmap,oldmat->colmap,a->Nbs)((sizeof(*(a->colmap)) != sizeof(*(oldmat->colmap))) || PetscMemcpy(a->colmap,oldmat->colmap,(a->Nbs)*sizeof (*(a->colmap))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3360,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3361 | #endif |
3362 | } else a->colmap = 0; |
3363 | |
3364 | if (oldmat->garray && (len = ((Mat_SeqBAIJ*)(oldmat->B->data))->nbs)) { |
3365 | ierr = PetscMalloc1(len,&a->garray)PetscMallocA(1,PETSC_FALSE,3365,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(len)*sizeof(**(&a->garray)),(&a->garray ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3365,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3366 | ierr = PetscLogObjectMemory((PetscObject)mat,len*sizeof(PetscInt));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3366,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3367 | ierr = PetscArraycpy(a->garray,oldmat->garray,len)((sizeof(*(a->garray)) != sizeof(*(oldmat->garray))) || PetscMemcpy(a->garray,oldmat->garray,(len)*sizeof(*(a-> garray))));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3367,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3368 | } else a->garray = 0; |
3369 | |
3370 | ierr = MatStashCreate_Private(PetscObjectComm((PetscObject)matin),matin->rmap->bs,&mat->bstash);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3370,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3371 | ierr = VecDuplicate(oldmat->lvec,&a->lvec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3371,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3372 | ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)a->lvec);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3372,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3373 | ierr = VecScatterCopy(oldmat->Mvctx,&a->Mvctx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3373,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3374 | ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)a->Mvctx);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3374,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3375 | |
3376 | ierr = MatDuplicate(oldmat->A,cpvalues,&a->A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3376,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3377 | ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3377,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3378 | ierr = MatDuplicate(oldmat->B,cpvalues,&a->B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3378,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3379 | ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)a->B);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3379,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3380 | ierr = PetscFunctionListDuplicate(((PetscObject)matin)->qlist,&((PetscObject)mat)->qlist);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3380,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3381 | *newmat = mat; |
3382 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
3383 | } |
3384 | |
3385 | PetscErrorCode MatLoad_MPIBAIJ(Mat newmat,PetscViewer viewer) |
3386 | { |
3387 | PetscErrorCode ierr; |
3388 | int fd; |
3389 | PetscInt i,nz,j,rstart,rend; |
3390 | PetscScalar *vals,*buf; |
3391 | MPI_Comm comm; |
3392 | MPI_Status status; |
3393 | PetscMPIInt rank,size,maxnz; |
3394 | PetscInt header[4],*rowlengths = 0,M,N,m,*rowners,*cols; |
3395 | PetscInt *locrowlens = NULL((void*)0),*procsnz = NULL((void*)0),*browners = NULL((void*)0); |
3396 | PetscInt jj,*mycols,*ibuf,bs = newmat->rmap->bs,Mbs,mbs,extra_rows,mmax; |
3397 | PetscMPIInt tag = ((PetscObject)viewer)->tag; |
3398 | PetscInt *dlens = NULL((void*)0),*odlens = NULL((void*)0),*mask = NULL((void*)0),*masked1 = NULL((void*)0),*masked2 = NULL((void*)0),rowcount,odcount; |
3399 | PetscInt dcount,kmax,k,nzcount,tmp,mend; |
3400 | PetscBool isbinary; |
3401 | |
3402 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 3402; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
3403 | ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY"binary",&isbinary);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3403,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3404 | if (!isbinary) SETERRQ2(PetscObjectComm((PetscObject)newmat),PETSC_ERR_SUP,"Viewer type %s not yet supported for reading %s matrices",((PetscObject)viewer)->type_name,((PetscObject)newmat)->type_name)return PetscError(PetscObjectComm((PetscObject)newmat),3404,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,56,PETSC_ERROR_INITIAL,"Viewer type %s not yet supported for reading %s matrices" ,((PetscObject)viewer)->type_name,((PetscObject)newmat)-> type_name); |
3405 | |
3406 | /* force binary viewer to load .info file if it has not yet done so */ |
3407 | ierr = PetscViewerSetUp(viewer);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3407,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3408 | ierr = PetscObjectGetComm((PetscObject)viewer,&comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3408,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3409 | ierr = PetscOptionsBegin(comm,NULL,"Options for loading MPIBAIJ matrix 2","Mat")0; do { PetscOptionItems PetscOptionsObjectBase; PetscOptionItems *PetscOptionsObject = &PetscOptionsObjectBase; PetscMemzero (PetscOptionsObject,sizeof(PetscOptionItems)); for (PetscOptionsObject ->count=(PetscOptionsPublish?-1:1); PetscOptionsObject-> count<2; PetscOptionsObject->count++) { PetscErrorCode _5_ierr = PetscOptionsBegin_Private(PetscOptionsObject,comm,((void*) 0),"Options for loading MPIBAIJ matrix 2","Mat");do {if (__builtin_expect (!!(_5_ierr),0)) return PetscError(((MPI_Comm)0x44000001),3409 ,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_5_ierr,PETSC_ERROR_REPEAT," ");} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3409,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3410 | ierr = PetscOptionsInt("-matload_block_size","Set the blocksize used to store the matrix","MatLoad",bs,&bs,NULL)PetscOptionsInt_Private(PetscOptionsObject,"-matload_block_size" ,"Set the blocksize used to store the matrix","MatLoad",bs,& bs,((void*)0),(-2147483647 - 1),2147483647);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3410,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3411 | ierr = PetscOptionsEnd()_5_ierr = PetscOptionsEnd_Private(PetscOptionsObject);do {if ( __builtin_expect(!!(_5_ierr),0)) return PetscError(((MPI_Comm )0x44000001),3411,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_5_ierr,PETSC_ERROR_REPEAT," ");} while (0);}} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3411,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3412 | if (bs < 0) bs = 1; |
3413 | |
3414 | ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3414,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3415 | ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3415,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3416 | ierr = PetscViewerBinaryGetDescriptor(viewer,&fd);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3416,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3417 | if (!rank) { |
3418 | ierr = PetscBinaryRead(fd,(char*)header,4,NULL((void*)0),PETSC_INT);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3418,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3419 | if (header[0] != MAT_FILE_CLASSID1211216) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_FILE_UNEXPECTED,"not matrix object")return PetscError(((MPI_Comm)0x44000001),3419,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,79,PETSC_ERROR_INITIAL,"not matrix object"); |
3420 | if (header[3] < 0) SETERRQ(PetscObjectComm((PetscObject)newmat),PETSC_ERR_FILE_UNEXPECTED,"Matrix stored in special format on disk, cannot load as MPIAIJ")return PetscError(PetscObjectComm((PetscObject)newmat),3420,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,79,PETSC_ERROR_INITIAL,"Matrix stored in special format on disk, cannot load as MPIAIJ" ); |
3421 | } |
3422 | ierr = MPI_Bcast(header+1,3,MPIU_INT,0,comm)((petsc_allreduce_ct += PetscMPIParallelComm((comm)),0) || MPI_Bcast ((header+1),(3),(((MPI_Datatype)0x4c000405)),(0),(comm)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3422,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3423 | M = header[1]; N = header[2]; |
3424 | |
3425 | /* If global sizes are set, check if they are consistent with that given in the file */ |
3426 | if (newmat->rmap->N >= 0 && newmat->rmap->N != M) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_FILE_UNEXPECTED,"Inconsistent # of rows:Matrix in file has (%D) and input matrix has (%D)",newmat->rmap->N,M)return PetscError(((MPI_Comm)0x44000001),3426,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,79,PETSC_ERROR_INITIAL,"Inconsistent # of rows:Matrix in file has (%D) and input matrix has (%D)" ,newmat->rmap->N,M); |
3427 | if (newmat->cmap->N >= 0 && newmat->cmap->N != N) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_FILE_UNEXPECTED,"Inconsistent # of cols:Matrix in file has (%D) and input matrix has (%D)",newmat->cmap->N,N)return PetscError(((MPI_Comm)0x44000001),3427,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,79,PETSC_ERROR_INITIAL,"Inconsistent # of cols:Matrix in file has (%D) and input matrix has (%D)" ,newmat->cmap->N,N); |
3428 | |
3429 | if (M != N) SETERRQ(PetscObjectComm((PetscObject)viewer),PETSC_ERR_SUP,"Can only do square matrices")return PetscError(PetscObjectComm((PetscObject)viewer),3429,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,56,PETSC_ERROR_INITIAL,"Can only do square matrices"); |
3430 | |
3431 | /* |
3432 | This code adds extra rows to make sure the number of rows is |
3433 | divisible by the blocksize |
3434 | */ |
3435 | Mbs = M/bs; |
3436 | extra_rows = bs - M + bs*Mbs; |
3437 | if (extra_rows == bs) extra_rows = 0; |
3438 | else Mbs++; |
3439 | if (extra_rows && !rank) { |
3440 | ierr = PetscInfo(viewer,"Padding loaded matrix to match blocksize\n")PetscInfo_Private(__func__,viewer,"Padding loaded matrix to match blocksize\n" );CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3440,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3441 | } |
3442 | |
3443 | /* determine ownership of all rows */ |
3444 | if (newmat->rmap->n < 0) { /* PETSC_DECIDE */ |
3445 | mbs = Mbs/size + ((Mbs % size) > rank); |
3446 | m = mbs*bs; |
3447 | } else { /* User set */ |
3448 | m = newmat->rmap->n; |
3449 | mbs = m/bs; |
3450 | } |
3451 | ierr = PetscMalloc2(size+1,&rowners,size+1,&browners)PetscMallocA(2,PETSC_FALSE,3451,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(size+1)*sizeof(**(&rowners)),(&rowners),(size_t )(size+1)*sizeof(**(&browners)),(&browners));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3451,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3452 | ierr = MPI_Allgather(&mbs,1,MPIU_INT,rowners+1,1,MPIU_INT,comm)((petsc_gather_ct += PetscMPIParallelComm((comm)),0) || MPI_Allgather ((&mbs),(1),(((MPI_Datatype)0x4c000405)),(rowners+1),(1), (((MPI_Datatype)0x4c000405)),(comm)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3452,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3453 | |
3454 | /* process 0 needs enough room for process with most rows */ |
3455 | if (!rank) { |
3456 | mmax = rowners[1]; |
3457 | for (i=2; i<=size; i++) { |
3458 | mmax = PetscMax(mmax,rowners[i])(((mmax)<(rowners[i])) ? (rowners[i]) : (mmax)); |
3459 | } |
3460 | mmax*=bs; |
3461 | } else mmax = -1; /* unused, but compiler warns anyway */ |
3462 | |
3463 | rowners[0] = 0; |
3464 | for (i=2; i<=size; i++) rowners[i] += rowners[i-1]; |
3465 | for (i=0; i<=size; i++) browners[i] = rowners[i]*bs; |
3466 | rstart = rowners[rank]; |
3467 | rend = rowners[rank+1]; |
3468 | |
3469 | /* distribute row lengths to all processors */ |
3470 | ierr = PetscMalloc1(m,&locrowlens)PetscMallocA(1,PETSC_FALSE,3470,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(m)*sizeof(**(&locrowlens)),(&locrowlens));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3470,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3471 | if (!rank) { |
3472 | mend = m; |
3473 | if (size == 1) mend = mend - extra_rows; |
3474 | ierr = PetscBinaryRead(fd,locrowlens,mend,NULL((void*)0),PETSC_INT);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3474,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3475 | for (j=mend; j<m; j++) locrowlens[j] = 1; |
3476 | ierr = PetscMalloc1(mmax,&rowlengths)PetscMallocA(1,PETSC_FALSE,3476,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(mmax)*sizeof(**(&rowlengths)),(&rowlengths) );CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3476,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3477 | ierr = PetscMalloc1(size,&procsnz)PetscMallocA(1,PETSC_FALSE,3477,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(size)*sizeof(**(&procsnz)),(&procsnz));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3477,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3478 | procsnz[0] = 0; |
3479 | for (j=0; j<m; j++) { |
3480 | procsnz[0] += locrowlens[j]; |
3481 | } |
3482 | for (i=1; i<size; i++) { |
3483 | mend = browners[i+1] - browners[i]; |
3484 | if (i == size-1) mend = mend - extra_rows; |
3485 | ierr = PetscBinaryRead(fd,rowlengths,mend,NULL((void*)0),PETSC_INT);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3485,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3486 | for (j=mend; j<browners[i+1] - browners[i]; j++) rowlengths[j] = 1; |
3487 | /* calculate the number of nonzeros on each processor */ |
3488 | procsnz[i] = 0; |
3489 | for (j=0; j<browners[i+1]-browners[i]; j++) { |
3490 | procsnz[i] += rowlengths[j]; |
3491 | } |
3492 | ierr = MPI_Send(rowlengths,browners[i+1]-browners[i],MPIU_INT,i,tag,comm)((petsc_send_ct++,0) || PetscMPITypeSize((browners[i+1]-browners [i]),(((MPI_Datatype)0x4c000405)),(&petsc_send_len)) || MPI_Send ((rowlengths),(browners[i+1]-browners[i]),(((MPI_Datatype)0x4c000405 )),(i),(tag),(comm)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3492,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3493 | } |
3494 | ierr = PetscFree(rowlengths)((*PetscTrFree)((void*)(rowlengths),3494,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((rowlengths) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3494,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3495 | } else { |
3496 | ierr = MPI_Recv(locrowlens,m,MPIU_INT,0,tag,comm,&status)((petsc_recv_ct++,0) || PetscMPITypeSize((m),(((MPI_Datatype) 0x4c000405)),(&petsc_recv_len)) || MPI_Recv((locrowlens), (m),(((MPI_Datatype)0x4c000405)),(0),(tag),(comm),(&status )));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3496,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3497 | } |
3498 | |
3499 | if (!rank) { |
3500 | /* determine max buffer needed and allocate it */ |
3501 | maxnz = procsnz[0]; |
3502 | for (i=1; i<size; i++) { |
3503 | maxnz = PetscMax(maxnz,procsnz[i])(((maxnz)<(procsnz[i])) ? (procsnz[i]) : (maxnz)); |
3504 | } |
3505 | ierr = PetscMalloc1(maxnz,&cols)PetscMallocA(1,PETSC_FALSE,3505,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(maxnz)*sizeof(**(&cols)),(&cols));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3505,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3506 | |
3507 | /* read in my part of the matrix column indices */ |
3508 | nz = procsnz[0]; |
3509 | ierr = PetscMalloc1(nz+1,&ibuf)PetscMallocA(1,PETSC_FALSE,3509,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(nz+1)*sizeof(**(&ibuf)),(&ibuf));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3509,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3510 | mycols = ibuf; |
3511 | if (size == 1) nz -= extra_rows; |
3512 | ierr = PetscBinaryRead(fd,mycols,nz,NULL((void*)0),PETSC_INT);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3512,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3513 | if (size == 1) { |
3514 | for (i=0; i< extra_rows; i++) mycols[nz+i] = M+i; |
3515 | } |
3516 | |
3517 | /* read in every ones (except the last) and ship off */ |
3518 | for (i=1; i<size-1; i++) { |
3519 | nz = procsnz[i]; |
3520 | ierr = PetscBinaryRead(fd,cols,nz,NULL((void*)0),PETSC_INT);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3520,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3521 | ierr = MPI_Send(cols,nz,MPIU_INT,i,tag,comm)((petsc_send_ct++,0) || PetscMPITypeSize((nz),(((MPI_Datatype )0x4c000405)),(&petsc_send_len)) || MPI_Send((cols),(nz), (((MPI_Datatype)0x4c000405)),(i),(tag),(comm)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3521,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3522 | } |
3523 | /* read in the stuff for the last proc */ |
3524 | if (size != 1) { |
3525 | nz = procsnz[size-1] - extra_rows; /* the extra rows are not on the disk */ |
3526 | ierr = PetscBinaryRead(fd,cols,nz,NULL((void*)0),PETSC_INT);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3526,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3527 | for (i=0; i<extra_rows; i++) cols[nz+i] = M+i; |
3528 | ierr = MPI_Send(cols,nz+extra_rows,MPIU_INT,size-1,tag,comm)((petsc_send_ct++,0) || PetscMPITypeSize((nz+extra_rows),(((MPI_Datatype )0x4c000405)),(&petsc_send_len)) || MPI_Send((cols),(nz+extra_rows ),(((MPI_Datatype)0x4c000405)),(size-1),(tag),(comm)));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3528,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3529 | } |
3530 | ierr = PetscFree(cols)((*PetscTrFree)((void*)(cols),3530,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((cols) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3530,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3531 | } else { |
3532 | /* determine buffer space needed for message */ |
3533 | nz = 0; |
3534 | for (i=0; i<m; i++) { |
3535 | nz += locrowlens[i]; |
3536 | } |
3537 | ierr = PetscMalloc1(nz+1,&ibuf)PetscMallocA(1,PETSC_FALSE,3537,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(nz+1)*sizeof(**(&ibuf)),(&ibuf));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3537,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3538 | mycols = ibuf; |
3539 | /* receive message of column indices*/ |
3540 | ierr = MPI_Recv(mycols,nz,MPIU_INT,0,tag,comm,&status)((petsc_recv_ct++,0) || PetscMPITypeSize((nz),(((MPI_Datatype )0x4c000405)),(&petsc_recv_len)) || MPI_Recv((mycols),(nz ),(((MPI_Datatype)0x4c000405)),(0),(tag),(comm),(&status) ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3540,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3541 | ierr = MPI_Get_count(&status,MPIU_INT((MPI_Datatype)0x4c000405),&maxnz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3541,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3542 | if (maxnz != nz) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file")return PetscError(((MPI_Comm)0x44000001),3542,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,79,PETSC_ERROR_INITIAL,"something is wrong with file"); |
3543 | } |
3544 | |
3545 | /* loop over local rows, determining number of off diagonal entries */ |
3546 | ierr = PetscMalloc2(rend-rstart,&dlens,rend-rstart,&odlens)PetscMallocA(2,PETSC_FALSE,3546,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(rend-rstart)*sizeof(**(&dlens)),(&dlens),(size_t )(rend-rstart)*sizeof(**(&odlens)),(&odlens));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3546,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3547 | ierr = PetscCalloc3(Mbs,&mask,Mbs,&masked1,Mbs,&masked2)PetscMallocA(3,PETSC_TRUE,3547,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(Mbs)*sizeof(**(&mask)),(&mask),(size_t)(Mbs )*sizeof(**(&masked1)),(&masked1),(size_t)(Mbs)*sizeof (**(&masked2)),(&masked2));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3547,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3548 | rowcount = 0; nzcount = 0; |
3549 | for (i=0; i<mbs; i++) { |
3550 | dcount = 0; |
3551 | odcount = 0; |
3552 | for (j=0; j<bs; j++) { |
3553 | kmax = locrowlens[rowcount]; |
3554 | for (k=0; k<kmax; k++) { |
3555 | tmp = mycols[nzcount++]/bs; |
3556 | if (!mask[tmp]) { |
3557 | mask[tmp] = 1; |
3558 | if (tmp < rstart || tmp >= rend) masked2[odcount++] = tmp; |
3559 | else masked1[dcount++] = tmp; |
3560 | } |
3561 | } |
3562 | rowcount++; |
3563 | } |
3564 | |
3565 | dlens[i] = dcount; |
3566 | odlens[i] = odcount; |
3567 | |
3568 | /* zero out the mask elements we set */ |
3569 | for (j=0; j<dcount; j++) mask[masked1[j]] = 0; |
3570 | for (j=0; j<odcount; j++) mask[masked2[j]] = 0; |
3571 | } |
3572 | |
3573 | ierr = MatSetSizes(newmat,m,m,M+extra_rows,N+extra_rows);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3573,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3574 | ierr = MatMPIBAIJSetPreallocation(newmat,bs,0,dlens,0,odlens);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3574,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3575 | |
3576 | if (!rank) { |
3577 | ierr = PetscMalloc1(maxnz+1,&buf)PetscMallocA(1,PETSC_FALSE,3577,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(maxnz+1)*sizeof(**(&buf)),(&buf));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3577,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3578 | /* read in my part of the matrix numerical values */ |
3579 | nz = procsnz[0]; |
3580 | vals = buf; |
3581 | mycols = ibuf; |
3582 | if (size == 1) nz -= extra_rows; |
3583 | ierr = PetscBinaryRead(fd,vals,nz,NULL((void*)0),PETSC_SCALARPETSC_DOUBLE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3583,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3584 | if (size == 1) { |
3585 | for (i=0; i< extra_rows; i++) vals[nz+i] = 1.0; |
3586 | } |
3587 | |
3588 | /* insert into matrix */ |
3589 | jj = rstart*bs; |
3590 | for (i=0; i<m; i++) { |
3591 | ierr = MatSetValues_MPIBAIJ(newmat,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3591,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3592 | mycols += locrowlens[i]; |
3593 | vals += locrowlens[i]; |
3594 | jj++; |
3595 | } |
3596 | /* read in other processors (except the last one) and ship out */ |
3597 | for (i=1; i<size-1; i++) { |
3598 | nz = procsnz[i]; |
3599 | vals = buf; |
3600 | ierr = PetscBinaryRead(fd,vals,nz,NULL((void*)0),PETSC_SCALARPETSC_DOUBLE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3600,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3601 | ierr = MPIULong_Send(vals,nz,MPIU_SCALAR((MPI_Datatype)0x4c00080b),i,((PetscObject)newmat)->tag,comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3601,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3602 | } |
3603 | /* the last proc */ |
3604 | if (size != 1) { |
3605 | nz = procsnz[i] - extra_rows; |
3606 | vals = buf; |
3607 | ierr = PetscBinaryRead(fd,vals,nz,NULL((void*)0),PETSC_SCALARPETSC_DOUBLE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3607,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3608 | for (i=0; i<extra_rows; i++) vals[nz+i] = 1.0; |
3609 | ierr = MPIULong_Send(vals,nz+extra_rows,MPIU_SCALAR((MPI_Datatype)0x4c00080b),size-1,((PetscObject)newmat)->tag,comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3609,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3610 | } |
3611 | ierr = PetscFree(procsnz)((*PetscTrFree)((void*)(procsnz),3611,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((procsnz) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3611,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3612 | } else { |
3613 | /* receive numeric values */ |
3614 | ierr = PetscMalloc1(nz+1,&buf)PetscMallocA(1,PETSC_FALSE,3614,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(nz+1)*sizeof(**(&buf)),(&buf));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3614,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3615 | |
3616 | /* receive message of values*/ |
3617 | vals = buf; |
3618 | mycols = ibuf; |
3619 | ierr = MPIULong_Recv(vals,nz,MPIU_SCALAR((MPI_Datatype)0x4c00080b),0,((PetscObject)newmat)->tag,comm);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3619,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3620 | |
3621 | /* insert into matrix */ |
3622 | jj = rstart*bs; |
3623 | for (i=0; i<m; i++) { |
3624 | ierr = MatSetValues_MPIBAIJ(newmat,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3624,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3625 | mycols += locrowlens[i]; |
3626 | vals += locrowlens[i]; |
3627 | jj++; |
3628 | } |
3629 | } |
3630 | ierr = PetscFree(locrowlens)((*PetscTrFree)((void*)(locrowlens),3630,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((locrowlens) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3630,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3631 | ierr = PetscFree(buf)((*PetscTrFree)((void*)(buf),3631,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((buf) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3631,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3632 | ierr = PetscFree(ibuf)((*PetscTrFree)((void*)(ibuf),3632,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((ibuf) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3632,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3633 | ierr = PetscFree2(rowners,browners)PetscFreeA(2,3633,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,&(rowners),&(browners));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3633,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3634 | ierr = PetscFree2(dlens,odlens)PetscFreeA(2,3634,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,&(dlens),&(odlens));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3634,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3635 | ierr = PetscFree3(mask,masked1,masked2)PetscFreeA(3,3635,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,&(mask),&(masked1),&(masked2));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3635,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3636 | ierr = MatAssemblyBegin(newmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3636,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3637 | ierr = MatAssemblyEnd(newmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3637,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3638 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
3639 | } |
3640 | |
3641 | /*@ |
3642 | MatMPIBAIJSetHashTableFactor - Sets the factor required to compute the size of the HashTable. |
3643 | |
3644 | Input Parameters: |
3645 | + mat - the matrix |
3646 | - fact - factor |
3647 | |
3648 | Not Collective, each process can use a different factor |
3649 | |
3650 | Level: advanced |
3651 | |
3652 | Notes: |
3653 | This can also be set by the command line option: -mat_use_hash_table <fact> |
3654 | |
3655 | .seealso: MatSetOption() |
3656 | @*/ |
3657 | PetscErrorCode MatMPIBAIJSetHashTableFactor(Mat mat,PetscReal fact) |
3658 | { |
3659 | PetscErrorCode ierr; |
3660 | |
3661 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 3661; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
3662 | ierr = PetscTryMethod(mat,"MatSetHashTableFactor_C",(Mat,PetscReal),(mat,fact))0; do { PetscErrorCode (*_7_f)(Mat,PetscReal), _7_ierr; _7_ierr = PetscObjectQueryFunction_Private(((PetscObject)(mat)),("MatSetHashTableFactor_C" ),(PetscVoidFunction*)(&_7_f));do {if (__builtin_expect(! !(_7_ierr),0)) return PetscError(((MPI_Comm)0x44000001),3662, __func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_7_ierr,PETSC_ERROR_REPEAT," ");} while (0); if (_7_f) {_7_ierr = (*_7_f)(mat,fact);do {if (__builtin_expect(!!(_7_ierr),0)) return PetscError(((MPI_Comm)0x44000001),3662,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_7_ierr,PETSC_ERROR_REPEAT," ");} while (0);} } while(0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3662,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3663 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
3664 | } |
3665 | |
3666 | PetscErrorCode MatSetHashTableFactor_MPIBAIJ(Mat mat,PetscReal fact) |
3667 | { |
3668 | Mat_MPIBAIJ *baij; |
3669 | |
3670 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 3670; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
3671 | baij = (Mat_MPIBAIJ*)mat->data; |
3672 | baij->ht_fact = fact; |
3673 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
3674 | } |
3675 | |
3676 | PetscErrorCode MatMPIBAIJGetSeqBAIJ(Mat A,Mat *Ad,Mat *Ao,const PetscInt *colmap[]) |
3677 | { |
3678 | Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data; |
3679 | PetscBool flg; |
3680 | PetscErrorCode ierr; |
3681 | |
3682 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 3682; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
3683 | ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIBAIJ"mpibaij",&flg);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3683,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3684 | if (!flg) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"This function requires a MATMPIBAIJ matrix as input")return PetscError(PetscObjectComm((PetscObject)A),3684,__func__ ,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,56,PETSC_ERROR_INITIAL,"This function requires a MATMPIBAIJ matrix as input" ); |
3685 | if (Ad) *Ad = a->A; |
3686 | if (Ao) *Ao = a->B; |
3687 | if (colmap) *colmap = a->garray; |
3688 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
3689 | } |
3690 | |
3691 | /* |
3692 | Special version for direct calls from Fortran (to eliminate two function call overheads |
3693 | */ |
3694 | #if defined(PETSC_HAVE_FORTRAN_CAPS) |
3695 | #define matmpibaijsetvaluesblocked_ MATMPIBAIJSETVALUESBLOCKED |
3696 | #elif !defined(PETSC_HAVE_FORTRAN_UNDERSCORE1) |
3697 | #define matmpibaijsetvaluesblocked_ matmpibaijsetvaluesblocked |
3698 | #endif |
3699 | |
3700 | /*@C |
3701 | MatMPIBAIJSetValuesBlocked - Direct Fortran call to replace call to MatSetValuesBlocked() |
3702 | |
3703 | Collective on Mat |
3704 | |
3705 | Input Parameters: |
3706 | + mat - the matrix |
3707 | . min - number of input rows |
3708 | . im - input rows |
3709 | . nin - number of input columns |
3710 | . in - input columns |
3711 | . v - numerical values input |
3712 | - addvin - INSERT_VALUES or ADD_VALUES |
3713 | |
3714 | Notes: |
3715 | This has a complete copy of MatSetValuesBlocked_MPIBAIJ() which is terrible code un-reuse. |
3716 | |
3717 | Level: advanced |
3718 | |
3719 | .seealso: MatSetValuesBlocked() |
3720 | @*/ |
3721 | PetscErrorCode matmpibaijsetvaluesblocked_(Mat *matin,PetscInt *min,const PetscInt im[],PetscInt *nin,const PetscInt in[],const MatScalar v[],InsertMode *addvin) |
3722 | { |
3723 | /* convert input arguments to C version */ |
3724 | Mat mat = *matin; |
3725 | PetscInt m = *min, n = *nin; |
3726 | InsertMode addv = *addvin; |
3727 | |
3728 | Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data; |
3729 | const MatScalar *value; |
3730 | MatScalar *barray = baij->barray; |
3731 | PetscBool roworiented = baij->roworiented; |
3732 | PetscErrorCode ierr; |
3733 | PetscInt i,j,ii,jj,row,col,rstart=baij->rstartbs; |
3734 | PetscInt rend=baij->rendbs,cstart=baij->cstartbs,stepval; |
3735 | PetscInt cend=baij->cendbs,bs=mat->rmap->bs,bs2=baij->bs2; |
3736 | |
3737 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 3737; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
3738 | /* tasks normally handled by MatSetValuesBlocked() */ |
3739 | if (mat->insertmode == NOT_SET_VALUES) mat->insertmode = addv; |
3740 | #if defined(PETSC_USE_DEBUG1) |
3741 | else if (mat->insertmode != addv) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Cannot mix add values and insert values")return PetscError(((MPI_Comm)0x44000001),3741,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,73,PETSC_ERROR_INITIAL,"Cannot mix add values and insert values" ); |
3742 | if (mat->factortype) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Not for factored matrix")return PetscError(((MPI_Comm)0x44000001),3742,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,73,PETSC_ERROR_INITIAL,"Not for factored matrix"); |
3743 | #endif |
3744 | if (mat->assembled) { |
3745 | mat->was_assembled = PETSC_TRUE; |
3746 | mat->assembled = PETSC_FALSE; |
3747 | } |
3748 | ierr = PetscLogEventBegin(MAT_SetValues,mat,0,0,0)(((PetscLogPLB && petsc_stageLog->stageInfo[petsc_stageLog ->curStage].perfInfo.active && petsc_stageLog-> stageInfo[petsc_stageLog->curStage].eventLog->eventInfo [MAT_SetValues].active) ? (*PetscLogPLB)((MAT_SetValues),0,(PetscObject )(mat),(PetscObject)(0),(PetscObject)(0),(PetscObject)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3748,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3749 | |
3750 | |
3751 | if (!barray) { |
3752 | ierr = PetscMalloc1(bs2,&barray)PetscMallocA(1,PETSC_FALSE,3752,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(bs2)*sizeof(**(&barray)),(&barray));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3752,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3753 | baij->barray = barray; |
3754 | } |
3755 | |
3756 | if (roworiented) stepval = (n-1)*bs; |
3757 | else stepval = (m-1)*bs; |
3758 | |
3759 | for (i=0; i<m; i++) { |
3760 | if (im[i] < 0) continue; |
3761 | #if defined(PETSC_USE_DEBUG1) |
3762 | if (im[i] >= baij->Mbs) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large, row %D max %D",im[i],baij->Mbs-1)return PetscError(((MPI_Comm)0x44000001),3762,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Row too large, row %D max %D",im[i], baij->Mbs-1); |
3763 | #endif |
3764 | if (im[i] >= rstart && im[i] < rend) { |
3765 | row = im[i] - rstart; |
3766 | for (j=0; j<n; j++) { |
3767 | /* If NumCol = 1 then a copy is not required */ |
3768 | if ((roworiented) && (n == 1)) { |
3769 | barray = (MatScalar*)v + i*bs2; |
3770 | } else if ((!roworiented) && (m == 1)) { |
3771 | barray = (MatScalar*)v + j*bs2; |
3772 | } else { /* Here a copy is required */ |
3773 | if (roworiented) { |
3774 | value = v + i*(stepval+bs)*bs + j*bs; |
3775 | } else { |
3776 | value = v + j*(stepval+bs)*bs + i*bs; |
3777 | } |
3778 | for (ii=0; ii<bs; ii++,value+=stepval) { |
3779 | for (jj=0; jj<bs; jj++) { |
3780 | *barray++ = *value++; |
3781 | } |
3782 | } |
3783 | barray -=bs2; |
3784 | } |
3785 | |
3786 | if (in[j] >= cstart && in[j] < cend) { |
3787 | col = in[j] - cstart; |
3788 | ierr = MatSetValuesBlocked_SeqBAIJ_Inlined(baij->A,row,col,barray,addv,im[i],in[j]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3788,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3789 | } else if (in[j] < 0) continue; |
3790 | #if defined(PETSC_USE_DEBUG1) |
3791 | else if (in[j] >= baij->Nbs) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large, col %D max %D",in[j],baij->Nbs-1)return PetscError(((MPI_Comm)0x44000001),3791,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Column too large, col %D max %D",in[ j],baij->Nbs-1); |
3792 | #endif |
3793 | else { |
3794 | if (mat->was_assembled) { |
3795 | if (!baij->colmap) { |
3796 | ierr = MatCreateColmap_MPIBAIJ_Private(mat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3796,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3797 | } |
3798 | |
3799 | #if defined(PETSC_USE_DEBUG1) |
3800 | #if defined(PETSC_USE_CTABLE1) |
3801 | { PetscInt data; |
3802 | ierr = PetscTableFind(baij->colmap,in[j]+1,&data);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3802,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3803 | if ((data - 1) % bs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Incorrect colmap")return PetscError(((MPI_Comm)0x44000001),3803,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,77,PETSC_ERROR_INITIAL,"Incorrect colmap"); |
3804 | } |
3805 | #else |
3806 | if ((baij->colmap[in[j]] - 1) % bs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Incorrect colmap")return PetscError(((MPI_Comm)0x44000001),3806,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,77,PETSC_ERROR_INITIAL,"Incorrect colmap"); |
3807 | #endif |
3808 | #endif |
3809 | #if defined(PETSC_USE_CTABLE1) |
3810 | ierr = PetscTableFind(baij->colmap,in[j]+1,&col);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3810,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3811 | col = (col - 1)/bs; |
3812 | #else |
3813 | col = (baij->colmap[in[j]] - 1)/bs; |
3814 | #endif |
3815 | if (col < 0 && !((Mat_SeqBAIJ*)(baij->A->data))->nonew) { |
3816 | ierr = MatDisAssemble_MPIBAIJ(mat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3816,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3817 | col = in[j]; |
3818 | } |
3819 | } else col = in[j]; |
3820 | ierr = MatSetValuesBlocked_SeqBAIJ_Inlined(baij->B,row,col,barray,addv,im[i],in[j]);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3820,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3821 | } |
3822 | } |
3823 | } else { |
3824 | if (!baij->donotstash) { |
3825 | if (roworiented) { |
3826 | ierr = MatStashValuesRowBlocked_Private(&mat->bstash,im[i],n,in,v,m,n,i);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3826,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3827 | } else { |
3828 | ierr = MatStashValuesColBlocked_Private(&mat->bstash,im[i],n,in,v,m,n,i);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3828,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3829 | } |
3830 | } |
3831 | } |
3832 | } |
3833 | |
3834 | /* task normally handled by MatSetValuesBlocked() */ |
3835 | ierr = PetscLogEventEnd(MAT_SetValues,mat,0,0,0)(((PetscLogPLE && petsc_stageLog->stageInfo[petsc_stageLog ->curStage].perfInfo.active && petsc_stageLog-> stageInfo[petsc_stageLog->curStage].eventLog->eventInfo [MAT_SetValues].active) ? (*PetscLogPLE)((MAT_SetValues),0,(PetscObject )(mat),(PetscObject)(0),(PetscObject)(0),(PetscObject)(0)) : 0 ));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3835,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3836 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
3837 | } |
3838 | |
3839 | /*@ |
3840 | MatCreateMPIBAIJWithArrays - creates a MPI BAIJ matrix using arrays that contain in standard block |
3841 | CSR format the local rows. |
3842 | |
3843 | Collective |
3844 | |
3845 | Input Parameters: |
3846 | + comm - MPI communicator |
3847 | . bs - the block size, only a block size of 1 is supported |
3848 | . m - number of local rows (Cannot be PETSC_DECIDE) |
3849 | . n - This value should be the same as the local size used in creating the |
3850 | x vector for the matrix-vector product y = Ax. (or PETSC_DECIDE to have |
3851 | calculated if N is given) For square matrices n is almost always m. |
3852 | . M - number of global rows (or PETSC_DETERMINE to have calculated if m is given) |
3853 | . N - number of global columns (or PETSC_DETERMINE to have calculated if n is given) |
3854 | . i - row indices; that is i[0] = 0, i[row] = i[row-1] + number of block elements in that rowth block row of the matrix |
3855 | . j - column indices |
3856 | - a - matrix values |
3857 | |
3858 | Output Parameter: |
3859 | . mat - the matrix |
3860 | |
3861 | Level: intermediate |
3862 | |
3863 | Notes: |
3864 | The i, j, and a arrays ARE copied by this routine into the internal format used by PETSc; |
3865 | thus you CANNOT change the matrix entries by changing the values of a[] after you have |
3866 | called this routine. Use MatCreateMPIAIJWithSplitArrays() to avoid needing to copy the arrays. |
3867 | |
3868 | The order of the entries in values is the same as the block compressed sparse row storage format; that is, it is |
3869 | the same as a three dimensional array in Fortran values(bs,bs,nnz) that contains the first column of the first |
3870 | block, followed by the second column of the first block etc etc. That is, the blocks are contiguous in memory |
3871 | with column-major ordering within blocks. |
3872 | |
3873 | The i and j indices are 0 based, and i indices are indices corresponding to the local j array. |
3874 | |
3875 | .seealso: MatCreate(), MatCreateSeqAIJ(), MatSetValues(), MatMPIAIJSetPreallocation(), MatMPIAIJSetPreallocationCSR(), |
3876 | MPIAIJ, MatCreateAIJ(), MatCreateMPIAIJWithSplitArrays() |
3877 | @*/ |
3878 | PetscErrorCode MatCreateMPIBAIJWithArrays(MPI_Comm comm,PetscInt bs,PetscInt m,PetscInt n,PetscInt M,PetscInt N,const PetscInt i[],const PetscInt j[],const PetscScalar a[],Mat *mat) |
3879 | { |
3880 | PetscErrorCode ierr; |
3881 | |
3882 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 3882; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
3883 | if (i[0]) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"i (row indices) must start with 0")return PetscError(((MPI_Comm)0x44000001),3883,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"i (row indices) must start with 0"); |
3884 | if (m < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"local number of rows (m) cannot be PETSC_DECIDE, or negative")return PetscError(((MPI_Comm)0x44000001),3884,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"local number of rows (m) cannot be PETSC_DECIDE, or negative" ); |
3885 | ierr = MatCreate(comm,mat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3885,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3886 | ierr = MatSetSizes(*mat,m,n,M,N);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3886,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3887 | ierr = MatSetType(*mat,MATMPIBAIJ"mpibaij");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3887,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3888 | ierr = MatSetBlockSize(*mat,bs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3888,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3889 | ierr = MatSetUp(*mat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3889,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3890 | ierr = MatSetOption(*mat,MAT_ROW_ORIENTED,PETSC_FALSE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3890,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3891 | ierr = MatMPIBAIJSetPreallocationCSR(*mat,bs,i,j,a);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3891,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3892 | ierr = MatSetOption(*mat,MAT_ROW_ORIENTED,PETSC_TRUE);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3892,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3893 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
3894 | } |
3895 | |
3896 | PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIBAIJ(MPI_Comm comm,Mat inmat,PetscInt n,MatReuse scall,Mat *outmat) |
3897 | { |
3898 | PetscErrorCode ierr; |
3899 | PetscInt m,N,i,rstart,nnz,Ii,bs,cbs; |
3900 | PetscInt *indx; |
3901 | PetscScalar *values; |
3902 | |
3903 | PetscFunctionBegindo { do { ; if (petscstack && (petscstack->currentsize < 64)) { petscstack->function[petscstack->currentsize ] = __func__; petscstack->file[petscstack->currentsize] = "/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ; petscstack->line[petscstack->currentsize] = 3903; petscstack ->petscroutine[petscstack->currentsize] = PETSC_TRUE; petscstack ->currentsize++; } if (petscstack) { petscstack->hotdepth += (PETSC_FALSE || petscstack->hotdepth); } ; } while (0) ; ; } while (0); |
3904 | ierr = MatGetSize(inmat,&m,&N);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3904,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3905 | if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */ |
3906 | Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)inmat->data; |
3907 | PetscInt *dnz,*onz,mbs,Nbs,nbs; |
3908 | PetscInt *bindx,rmax=a->rmax,j; |
3909 | PetscMPIInt rank,size; |
3910 | |
3911 | ierr = MatGetBlockSizes(inmat,&bs,&cbs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3911,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3912 | mbs = m/bs; Nbs = N/cbs; |
3913 | if (n == PETSC_DECIDE-1) { |
3914 | ierr = PetscSplitOwnershipBlock(comm,cbs,&n,&N); |
Value stored to 'ierr' is never read | |
3915 | } |
3916 | nbs = n/cbs; |
3917 | |
3918 | ierr = PetscMalloc1(rmax,&bindx)PetscMallocA(1,PETSC_FALSE,3918,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)(rmax)*sizeof(**(&bindx)),(&bindx));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3918,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3919 | ierr = MatPreallocateInitialize(comm,mbs,nbs,dnz,onz)0; do { PetscErrorCode _4_ierr; PetscInt __nrows = (mbs),__ncols = (nbs),__rstart,__start,__end; _4_ierr = PetscMallocA(2,PETSC_TRUE ,3919,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,(size_t)((size_t)__nrows)*sizeof(**(&dnz)),(&dnz),(size_t )((size_t)__nrows)*sizeof(**(&onz)),(&onz));do {if (__builtin_expect (!!(_4_ierr),0)) return PetscError(((MPI_Comm)0x44000001),3919 ,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __start = 0; __end = __start; _4_ierr = MPI_Scan(&__ncols,&__end,1,((MPI_Datatype )0x4c000405),(MPI_Op)(0x58000003),comm);do {if (__builtin_expect (!!(_4_ierr),0)) return PetscError(((MPI_Comm)0x44000001),3919 ,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __start = __end - __ncols; _4_ierr = MPI_Scan(&__nrows,&__rstart,1,( (MPI_Datatype)0x4c000405),(MPI_Op)(0x58000003),comm);do {if ( __builtin_expect(!!(_4_ierr),0)) return PetscError(((MPI_Comm )0x44000001),3919,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0); __rstart = __rstart - __nrows; do { } while(0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3919,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); /* inline function, output __end and __rstart are used below */ |
3920 | |
3921 | ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3921,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3922 | ierr = MPI_Comm_rank(comm,&size);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3922,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3923 | if (rank == size-1) { |
3924 | /* Check sum(nbs) = Nbs */ |
3925 | if (__end != Nbs) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Sum of local block columns %D != global block columns %D",__end,Nbs)return PetscError(((MPI_Comm)0x44000001),3925,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,75,PETSC_ERROR_INITIAL,"Sum of local block columns %D != global block columns %D" ,__end,Nbs); |
3926 | } |
3927 | |
3928 | rstart = __rstart; /* block rstart of *outmat; see inline function MatPreallocateInitialize */ |
3929 | for (i=0; i<mbs; i++) { |
3930 | ierr = MatGetRow_SeqBAIJ(inmat,i*bs,&nnz,&indx,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3930,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); /* non-blocked nnz and indx */ |
3931 | nnz = nnz/bs; |
3932 | for (j=0; j<nnz; j++) bindx[j] = indx[j*bs]/bs; |
3933 | ierr = MatPreallocateSet(i+rstart,nnz,bindx,dnz,onz)0;do { PetscInt __i; if (i+rstart < __rstart) return PetscError (((MPI_Comm)0x44000001),3933,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Trying to set preallocation for row %D less than first local row %D" ,i+rstart,__rstart); if (i+rstart >= __rstart+__nrows) return PetscError(((MPI_Comm)0x44000001),3933,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,63,PETSC_ERROR_INITIAL,"Trying to set preallocation for row %D greater than last local row %D" ,i+rstart,__rstart+__nrows-1); for (__i=0; __i<nnz; __i++) { if ((bindx)[__i] < __start || (bindx)[__i] >= __end) onz[i+rstart - __rstart]++; else if (dnz[i+rstart - __rstart ] < __ncols) dnz[i+rstart - __rstart]++; }} while (0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3933,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3934 | ierr = MatRestoreRow_SeqBAIJ(inmat,i*bs,&nnz,&indx,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3934,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3935 | } |
3936 | ierr = PetscFree(bindx)((*PetscTrFree)((void*)(bindx),3936,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ) || ((bindx) = 0,0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3936,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3937 | |
3938 | ierr = MatCreate(comm,outmat);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3938,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3939 | ierr = MatSetSizes(*outmat,m,n,PETSC_DETERMINE-1,PETSC_DETERMINE-1);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3939,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3940 | ierr = MatSetBlockSizes(*outmat,bs,cbs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3940,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3941 | ierr = MatSetType(*outmat,MATBAIJ"baij");CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3941,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3942 | ierr = MatSeqBAIJSetPreallocation(*outmat,bs,0,dnz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3942,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3943 | ierr = MatMPIBAIJSetPreallocation(*outmat,bs,0,dnz,0,onz);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3943,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3944 | ierr = MatPreallocateFinalize(dnz,onz)0;_4_ierr = PetscFreeA(2,3944,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,&(dnz),&(onz));do {if (__builtin_expect(!!(_4_ierr), 0)) return PetscError(((MPI_Comm)0x44000001),3944,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,_4_ierr,PETSC_ERROR_REPEAT," ");} while (0);} while(0);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3944,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3945 | } |
3946 | |
3947 | /* numeric phase */ |
3948 | ierr = MatGetBlockSizes(inmat,&bs,&cbs);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3948,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3949 | ierr = MatGetOwnershipRange(*outmat,&rstart,NULL((void*)0));CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3949,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3950 | |
3951 | for (i=0; i<m; i++) { |
3952 | ierr = MatGetRow_SeqBAIJ(inmat,i,&nnz,&indx,&values);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3952,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3953 | Ii = i + rstart; |
3954 | ierr = MatSetValues(*outmat,1,&Ii,nnz,indx,values,INSERT_VALUES);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3954,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3955 | ierr = MatRestoreRow_SeqBAIJ(inmat,i,&nnz,&indx,&values);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3955,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3956 | } |
3957 | ierr = MatAssemblyBegin(*outmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3957,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3958 | ierr = MatAssemblyEnd(*outmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr)do {if (__builtin_expect(!!(ierr),0)) return PetscError(((MPI_Comm )0x44000001),3958,__func__,"/sandbox/petsc/petsc.master/src/mat/impls/baij/mpi/mpibaij.c" ,ierr,PETSC_ERROR_REPEAT," ");} while (0); |
3959 | PetscFunctionReturn(0)do { do { ; if (petscstack && petscstack->currentsize > 0) { petscstack->currentsize--; petscstack->function [petscstack->currentsize] = 0; petscstack->file[petscstack ->currentsize] = 0; petscstack->line[petscstack->currentsize ] = 0; petscstack->petscroutine[petscstack->currentsize ] = PETSC_FALSE; } if (petscstack) { petscstack->hotdepth = (((petscstack->hotdepth-1)<(0)) ? (0) : (petscstack-> hotdepth-1)); } ; } while (0); return(0);} while (0); |
3960 | } |