1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660 | /**
* MOAB, a Mesh-Oriented datABase, is a software component for creating,
* storing and accessing finite element mesh data.
*
* Copyright 2004 Sandia Corporation. Under the terms of Contract
* DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government
* retains certain rights in this software.
*
* This library is free software; you can redistribute it and/or
* modify it under the terms of the GNU Lesser General Public
* License as published by the Free Software Foundation; either
* version 2.1 of the License, or (at your option) any later version.
*
*/
#ifdef WIN32
#ifdef _DEBUG
// turn off warnings that say they debugging identifier has been truncated
// this warning comes up when using some STL containers
#pragma warning( disable : 4786 )
#endif
#endif
#include "WriteTemplate.hpp"
#include <utility>
#include <algorithm>
#include <ctime>
#include <string>
#include <vector>
#include <cstdio>
#include <cstring>
#include <iostream>
#include "moab/Interface.hpp"
#include "moab/Range.hpp"
#include "moab/CN.hpp"
#include <cassert>
#include "Internals.hpp"
#include "ExoIIUtil.hpp"
#include "MBTagConventions.hpp"
#include "moab/WriteUtilIface.hpp"
namespace moab
{
#define INS_ID( stringvar, prefix, id ) sprintf( stringvar, prefix, id )
WriterIface* WriteTemplate::factory( Interface* iface )
{
return new WriteTemplate( iface );
}
WriteTemplate::WriteTemplate( Interface* impl ) : mbImpl( impl )
{
assert( impl != NULL );
impl->query_interface( mWriteIface );
// Initialize in case tag_get_handle fails below
//! Get and cache predefined tag handles
int negone = -1;
impl->tag_get_handle( MATERIAL_SET_TAG_NAME, 1, MB_TYPE_INTEGER, mMaterialSetTag, MB_TAG_SPARSE | MB_TAG_CREAT,
&negone );
impl->tag_get_handle( DIRICHLET_SET_TAG_NAME, 1, MB_TYPE_INTEGER, mDirichletSetTag, MB_TAG_SPARSE | MB_TAG_CREAT,
&negone );
impl->tag_get_handle( NEUMANN_SET_TAG_NAME, 1, MB_TYPE_INTEGER, mNeumannSetTag, MB_TAG_SPARSE | MB_TAG_CREAT,
&negone );
mGlobalIdTag = impl->globalId_tag();
impl->tag_get_handle( "WriteTemplate element mark", 1, MB_TYPE_BIT, mEntityMark, MB_TAG_CREAT );
}
WriteTemplate::~WriteTemplate()
{
mbImpl->release_interface( mWriteIface );
mbImpl->tag_delete( mEntityMark );
}
void WriteTemplate::reset_matset( std::vector< WriteTemplate::MaterialSetData >& matset_info )
{
std::vector< WriteTemplate::MaterialSetData >::iterator iter;
for( iter = matset_info.begin(); iter != matset_info.end(); ++iter )
delete( *iter ).elements;
}
ErrorCode WriteTemplate::write_file( const char* file_name,
const bool /* overwrite (commented out to remove warning) */,
const FileOptions& /*opts*/,
const EntityHandle* ent_handles,
const int num_sets,
const std::vector< std::string >& /* qa_list */,
const Tag* /* tag_list */,
int /* num_tags */,
int /* export_dimension */ )
{
assert( 0 != mMaterialSetTag && 0 != mNeumannSetTag && 0 != mDirichletSetTag );
// Check the file name
if( NULL == strstr( file_name, ".template" ) ) return MB_FAILURE;
std::vector< EntityHandle > matsets, dirsets, neusets;
fileName = file_name;
// Separate into material sets, dirichlet sets, neumann sets
if( num_sets == 0 )
{
// Default to all defined sets
Range this_range;
mbImpl->get_entities_by_type_and_tag( 0, MBENTITYSET, &mMaterialSetTag, NULL, 1, this_range );
std::copy( this_range.begin(), this_range.end(), std::back_inserter( matsets ) );
this_range.clear();
mbImpl->get_entities_by_type_and_tag( 0, MBENTITYSET, &mDirichletSetTag, NULL, 1, this_range );
std::copy( this_range.begin(), this_range.end(), std::back_inserter( dirsets ) );
this_range.clear();
mbImpl->get_entities_by_type_and_tag( 0, MBENTITYSET, &mNeumannSetTag, NULL, 1, this_range );
std::copy( this_range.begin(), this_range.end(), std::back_inserter( neusets ) );
}
else
{
int dummy;
for( const EntityHandle* iter = ent_handles; iter < ent_handles + num_sets; ++iter )
{
if( MB_SUCCESS == mbImpl->tag_get_data( mMaterialSetTag, &( *iter ), 1, &dummy ) )<--- Redundant pointer operation on 'iter' - it's already a pointer.
matsets.push_back( *iter );
else if( MB_SUCCESS == mbImpl->tag_get_data( mDirichletSetTag, &( *iter ), 1, &dummy ) )<--- Redundant pointer operation on 'iter' - it's already a pointer.
dirsets.push_back( *iter );
else if( MB_SUCCESS == mbImpl->tag_get_data( mNeumannSetTag, &( *iter ), 1, &dummy ) )<--- Redundant pointer operation on 'iter' - it's already a pointer.
neusets.push_back( *iter );
}
}
// If there is nothing to write just return.
if( matsets.empty() && dirsets.empty() && neusets.empty() ) return MB_FILE_WRITE_ERROR;
std::vector< WriteTemplate::MaterialSetData > matset_info;
std::vector< WriteTemplate::DirichletSetData > dirset_info;
std::vector< WriteTemplate::NeumannSetData > neuset_info;
MeshInfo mesh_info;
matset_info.clear();
if( gather_mesh_information( mesh_info, matset_info, neuset_info, dirset_info, matsets, neusets, dirsets ) !=
MB_SUCCESS )
{
reset_matset( matset_info );
return MB_FAILURE;
}
// Try to open the file after gather mesh info succeeds
if( /* Test for file open failure */ false )
{
reset_matset( matset_info );
return MB_FAILURE;
}
if( initialize_file( mesh_info ) != MB_SUCCESS )
{
reset_matset( matset_info );
return MB_FAILURE;
}
if( write_nodes( mesh_info.num_nodes, mesh_info.nodes, mesh_info.num_dim ) != MB_SUCCESS )
{
reset_matset( matset_info );
return MB_FAILURE;
}
if( write_matsets( mesh_info, matset_info, neuset_info ) )
{
reset_matset( matset_info );
return MB_FAILURE;
}
return MB_SUCCESS;
}
ErrorCode WriteTemplate::gather_mesh_information( MeshInfo& mesh_info,
std::vector< WriteTemplate::MaterialSetData >& matset_info,
std::vector< WriteTemplate::NeumannSetData >& neuset_info,
std::vector< WriteTemplate::DirichletSetData >& dirset_info,
std::vector< EntityHandle >& matsets,
std::vector< EntityHandle >& neusets,
std::vector< EntityHandle >& dirsets )
{
std::vector< EntityHandle >::iterator vector_iter, end_vector_iter;
mesh_info.num_nodes = 0;
mesh_info.num_elements = 0;
mesh_info.num_matsets = 0;
int id = 0;
vector_iter = matsets.begin();<--- vector_iter is assigned
end_vector_iter = matsets.end();<--- end_vector_iter is assigned
mesh_info.num_matsets = matsets.size();
std::vector< EntityHandle > parent_meshsets;
// Clean out the bits for the element mark
mbImpl->tag_delete( mEntityMark );
mbImpl->tag_get_handle( "WriteTemplate element mark", 1, MB_TYPE_BIT, mEntityMark, MB_TAG_CREAT );
int highest_dimension_of_element_matsets = 0;
for( vector_iter = matsets.begin(); vector_iter != matsets.end(); ++vector_iter )<--- vector_iter is overwritten
{
WriteTemplate::MaterialSetData matset_data;
matset_data.elements = new Range;
// For the purpose of qa records, get the parents of these matsets
if( mbImpl->get_parent_meshsets( *vector_iter, parent_meshsets ) != MB_SUCCESS ) return MB_FAILURE;<--- Memory leak: matset_data.elements
// Get all Entity Handles in the mesh set
Range dummy_range;
mbImpl->get_entities_by_handle( *vector_iter, dummy_range, true );
// Find the dimension of the last entity in this range
Range::iterator entity_iter = dummy_range.end();
--entity_iter;
int this_dim = CN::Dimension( TYPE_FROM_HANDLE( *entity_iter ) );
entity_iter = dummy_range.begin();
while( entity_iter != dummy_range.end() && CN::Dimension( TYPE_FROM_HANDLE( *entity_iter ) ) != this_dim )
++entity_iter;
if( entity_iter != dummy_range.end() )
std::copy( entity_iter, dummy_range.end(), range_inserter( *( matset_data.elements ) ) );
assert( matset_data.elements->begin() == matset_data.elements->end() ||
CN::Dimension( TYPE_FROM_HANDLE( *( matset_data.elements->begin() ) ) ) == this_dim );
// Get the matset's id
if( mbImpl->tag_get_data( mMaterialSetTag, &( *vector_iter ), 1, &id ) != MB_SUCCESS )
{
MB_SET_ERR( MB_FAILURE, "Couldn't get matset id from a tag for an element matset" );
}
matset_data.id = id;
matset_data.number_attributes = 0;
// Iterate through all the elements in the meshset
Range::iterator elem_range_iter, end_elem_range_iter;
elem_range_iter = matset_data.elements->begin();
end_elem_range_iter = matset_data.elements->end();
// Get the entity type for this matset, verifying that it's the same for all elements
// THIS ASSUMES HANDLES SORT BY TYPE!!!
EntityType entity_type = TYPE_FROM_HANDLE( *elem_range_iter );
--end_elem_range_iter;
if( entity_type != TYPE_FROM_HANDLE( *( end_elem_range_iter++ ) ) )
{
MB_SET_ERR( MB_FAILURE, "Entities in matset " << id << " not of common type" );
}
int dimension = CN::Dimension( entity_type );
if( dimension > highest_dimension_of_element_matsets ) highest_dimension_of_element_matsets = dimension;
matset_data.moab_type = mbImpl->type_from_handle( *( matset_data.elements->begin() ) );
if( MBMAXTYPE == matset_data.moab_type ) return MB_FAILURE;
std::vector< EntityHandle > tmp_conn;
mbImpl->get_connectivity( &( *( matset_data.elements->begin() ) ), 1, tmp_conn );
matset_data.element_type =
ExoIIUtil::get_element_type_from_num_verts( tmp_conn.size(), entity_type, dimension );
if( matset_data.element_type == EXOII_MAX_ELEM_TYPE )
{
MB_SET_ERR( MB_FAILURE, "Element type in matset " << id << " didn't get set correctly" );
}
matset_data.number_nodes_per_element = ExoIIUtil::VerticesPerElement[matset_data.element_type];
// Number of nodes for this matset
matset_data.number_elements = matset_data.elements->size();
// Total number of elements
mesh_info.num_elements += matset_data.number_elements;
// Get the nodes for the elements
mWriteIface->gather_nodes_from_elements( *matset_data.elements, mEntityMark, mesh_info.nodes );
if( !neusets.empty() )
{
// If there are neusets, keep track of which elements are being written out
for( Range::iterator iter = matset_data.elements->begin(); iter != matset_data.elements->end(); ++iter )
{
unsigned char bit = 0x1;
mbImpl->tag_set_data( mEntityMark, &( *iter ), 1, &bit );
}
}
matset_info.push_back( matset_data );
}
// If user hasn't entered dimension, we figure it out
if( mesh_info.num_dim == 0 )
{
// Never want 1 or zero dimensions
if( highest_dimension_of_element_matsets < 2 )
mesh_info.num_dim = 3;
else
mesh_info.num_dim = highest_dimension_of_element_matsets;
}
Range::iterator range_iter, end_range_iter;
range_iter = mesh_info.nodes.begin();
end_range_iter = mesh_info.nodes.end();
mesh_info.num_nodes = mesh_info.nodes.size();
//------dirsets--------
vector_iter = dirsets.begin();
end_vector_iter = dirsets.end();<--- end_vector_iter is overwritten
for( ; vector_iter != end_vector_iter; ++vector_iter )
{
WriteTemplate::DirichletSetData dirset_data;
dirset_data.id = 0;
dirset_data.number_nodes = 0;
// Get the dirset's id
if( mbImpl->tag_get_data( mDirichletSetTag, &( *vector_iter ), 1, &id ) != MB_SUCCESS )
{
MB_SET_ERR( MB_FAILURE, "Couldn't get id tag for dirset " << id );
}
dirset_data.id = id;
std::vector< EntityHandle > node_vector;
// Get the nodes of the dirset that are in mesh_info.nodes
if( mbImpl->get_entities_by_handle( *vector_iter, node_vector, true ) != MB_SUCCESS )
{
MB_SET_ERR( MB_FAILURE, "Couldn't get nodes in dirset " << id );
}
std::vector< EntityHandle >::iterator iter, end_iter;
iter = node_vector.begin();
end_iter = node_vector.end();
int j = 0;
unsigned char node_marked = 0;
ErrorCode result;
for( ; iter != end_iter; ++iter )
{
if( TYPE_FROM_HANDLE( *iter ) != MBVERTEX ) continue;
result = mbImpl->tag_get_data( mEntityMark, &( *iter ), 1, &node_marked );MB_CHK_SET_ERR( result, "Couldn't get mark data" );
if( 0x1 == node_marked ) dirset_data.nodes.push_back( *iter );
j++;
}
dirset_data.number_nodes = dirset_data.nodes.size();
dirset_info.push_back( dirset_data );
}
//------neusets--------
vector_iter = neusets.begin();
end_vector_iter = neusets.end();
for( ; vector_iter != end_vector_iter; ++vector_iter )
{
WriteTemplate::NeumannSetData neuset_data;
// Get the neuset's id
if( mbImpl->tag_get_data( mNeumannSetTag, &( *vector_iter ), 1, &id ) != MB_SUCCESS ) return MB_FAILURE;
neuset_data.id = id;
neuset_data.mesh_set_handle = *vector_iter;
// Get the sides in two lists, one forward the other reverse; starts with forward sense
// by convention
Range forward_elems, reverse_elems;
if( get_neuset_elems( *vector_iter, 0, forward_elems, reverse_elems ) == MB_FAILURE ) return MB_FAILURE;
ErrorCode result = get_valid_sides( forward_elems, 1, neuset_data );MB_CHK_SET_ERR( result, "Couldn't get valid sides data" );
result = get_valid_sides( reverse_elems, -1, neuset_data );MB_CHK_SET_ERR( result, "Couldn't get valid sides data" );
neuset_data.number_elements = neuset_data.elements.size();
neuset_info.push_back( neuset_data );
}
return MB_SUCCESS;
}
ErrorCode WriteTemplate::get_valid_sides( Range& elems, const int sense, WriteTemplate::NeumannSetData& neuset_data )
{
// This is where we see if underlying element of side set element is included in output
unsigned char element_marked = 0;
ErrorCode result;
for( Range::iterator iter = elems.begin(); iter != elems.end(); ++iter )
{
// Should insert here if "side" is a quad/tri on a quad/tri mesh
result = mbImpl->tag_get_data( mEntityMark, &( *iter ), 1, &element_marked );MB_CHK_SET_ERR( result, "Couldn't get mark data" );
if( 0x1 == element_marked )
{
neuset_data.elements.push_back( *iter );
// TJT TODO: the sense should really be # edges + 1or2
neuset_data.side_numbers.push_back( ( sense == 1 ? 1 : 2 ) );
}
else
{ // Then "side" is probably a quad/tri on a hex/tet mesh
std::vector< EntityHandle > parents;
int dimension = CN::Dimension( TYPE_FROM_HANDLE( *iter ) );
// Get the adjacent parent element of "side"
if( mbImpl->get_adjacencies( &( *iter ), 1, dimension + 1, false, parents ) != MB_SUCCESS )
{
MB_SET_ERR( MB_FAILURE, "Couldn't get adjacencies for neuset" );
}
if( !parents.empty() )
{
// Make sure the adjacent parent element will be output
for( unsigned int k = 0; k < parents.size(); k++ )
{
result = mbImpl->tag_get_data( mEntityMark, &( parents[k] ), 1, &element_marked );MB_CHK_SET_ERR( result, "Couldn't get mark data" );
int side_no, this_sense, this_offset;
if( 0x1 == element_marked &&
mbImpl->side_number( parents[k], *iter, side_no, this_sense, this_offset ) == MB_SUCCESS &&
this_sense == sense )
{
neuset_data.elements.push_back( parents[k] );
neuset_data.side_numbers.push_back( side_no + 1 );
break;
}
}
}
else
{
MB_SET_ERR( MB_FAILURE, "No parent element exists for element in neuset " << neuset_data.id );
}
}
}
return MB_SUCCESS;
}
ErrorCode WriteTemplate::write_nodes( const int num_nodes, const Range& nodes, const int dimension )
{
// See if should transform coordinates
ErrorCode result;
Tag trans_tag;
result = mbImpl->tag_get_handle( MESH_TRANSFORM_TAG_NAME, 16, MB_TYPE_DOUBLE, trans_tag );
bool transform_needed = true;
if( result == MB_TAG_NOT_FOUND ) transform_needed = false;
int num_coords_to_fill = transform_needed ? 3 : dimension;
std::vector< double* > coord_arrays( 3 );
coord_arrays[0] = new double[num_nodes];
coord_arrays[1] = new double[num_nodes];
coord_arrays[2] = NULL;
if( num_coords_to_fill == 3 ) coord_arrays[2] = new double[num_nodes];
result = mWriteIface->get_node_coords( dimension, num_nodes, nodes, mGlobalIdTag, 0, coord_arrays );
if( result != MB_SUCCESS )
{
delete[] coord_arrays[0];
delete[] coord_arrays[1];
if( coord_arrays[2] ) delete[] coord_arrays[2];
return result;
}
if( transform_needed )
{
double trans_matrix[16];
const EntityHandle mesh = 0;
result = mbImpl->tag_get_data( trans_tag, &mesh, 1, trans_matrix );MB_CHK_SET_ERR( result, "Couldn't get transform data" );
for( int i = 0; i < num_nodes; i++ )
{
double vec1[3];
double vec2[3];
vec2[0] = coord_arrays[0][i];
vec2[1] = coord_arrays[1][i];
vec2[2] = coord_arrays[2][i];
for( int row = 0; row < 3; row++ )
{
vec1[row] = 0.0;
for( int col = 0; col < 3; col++ )
vec1[row] += ( trans_matrix[( row * 4 ) + col] * vec2[col] );
}
coord_arrays[0][i] = vec1[0];
coord_arrays[1][i] = vec1[1];
coord_arrays[2][i] = vec1[2];
}
}
// Write the nodes
/* Template - write nodes to file here in some way */
// Clean up
delete[] coord_arrays[0];
delete[] coord_arrays[1];
if( coord_arrays[2] ) delete[] coord_arrays[2];
return MB_SUCCESS;
}
ErrorCode WriteTemplate::write_matsets(
MeshInfo& /* mesh_info (commented out to remove warning) */,
std::vector< WriteTemplate::MaterialSetData >& matset_data,
std::vector< WriteTemplate::NeumannSetData >& /* neuset_data (commented out to remove warning) */ )
{
unsigned int i;
std::vector< int > connect;
const EntityHandle* connecth;
int num_connecth;
ErrorCode result;
// Don't usually have anywhere near 31 nodes per element
connect.reserve( 31 );
Range::iterator rit;
WriteTemplate::MaterialSetData matset;
for( i = 0; i < matset_data.size(); i++ )
{
matset = matset_data[i];
for( rit = matset.elements->begin(); rit != matset.elements->end(); ++rit )
{
// Get the connectivity of this element
result = mbImpl->get_connectivity( *rit, connecth, num_connecth );
if( MB_SUCCESS != result ) return result;
// Get the vertex ids
result = mbImpl->tag_get_data( mGlobalIdTag, connecth, num_connecth, &connect[0] );
if( MB_SUCCESS != result ) return result;
// Write the data
/* Template - write element connectivity here */
if( /* Template - check for error condition! */ false ) return MB_FAILURE;
}
}
return MB_SUCCESS;
}
ErrorCode WriteTemplate::initialize_file( MeshInfo& mesh_info )<--- Parameter 'mesh_info' can be declared with const
{
// Perform the initializations
int coord_size, ncoords;
coord_size = mesh_info.num_dim;
std::cout << "Coord_size = " << coord_size << std::endl;
/* Template - write coord size */
ncoords = mesh_info.num_nodes;
std::cout << "ncoords = " << ncoords << std::endl;
/* Template - write num nodes*/
/* Template - write information on the element types & numbers (depends
on material and other sets) */
/* Node coordinate arrays: */
/* Template - initialize variable to hold coordinate arrays */
return MB_SUCCESS;
}
ErrorCode WriteTemplate::open_file( const char* filename )
{
// Not a valid filename
if( strlen( (const char*)filename ) == 0 )
{
MB_SET_ERR( MB_FAILURE, "Output filename not specified" );
}
/* Template - open file & store somewhere */
// File couldn't be opened
if( /* Template - check for file open error here! */ false )
{
MB_SET_ERR( MB_FAILURE, "Cannot open " << filename );
}
return MB_SUCCESS;
}
ErrorCode WriteTemplate::get_neuset_elems( EntityHandle neuset,
int current_sense,
Range& forward_elems,
Range& reverse_elems )
{
Range neuset_elems, neuset_meshsets;
// Get the sense tag; don't need to check return, might be an error if the tag
// hasn't been created yet
Tag sense_tag = 0;
mbImpl->tag_get_handle( "SENSE", 1, MB_TYPE_INTEGER, sense_tag );
// Get the entities in this set
ErrorCode result = mbImpl->get_entities_by_handle( neuset, neuset_elems, true );
if( MB_FAILURE == result ) return result;
// Now remove the meshsets into the neuset_meshsets; first find the first meshset,
Range::iterator range_iter = neuset_elems.begin();
while( TYPE_FROM_HANDLE( *range_iter ) != MBENTITYSET && range_iter != neuset_elems.end() )<--- Possible dereference of an invalid iterator: range_iter [+]Possible dereference of an invalid iterator: range_iter. Make sure to check that the iterator is valid before dereferencing it - not after.
++range_iter;
// Then, if there are some, copy them into neuset_meshsets and erase from neuset_elems
if( range_iter != neuset_elems.end() )
{
std::copy( range_iter, neuset_elems.end(), range_inserter( neuset_meshsets ) );
neuset_elems.erase( range_iter, neuset_elems.end() );
}
// OK, for the elements, check the sense of this set and copy into the right range
// (if the sense is 0, copy into both ranges)
// Need to step forward on list until we reach the right dimension
Range::iterator dum_it = neuset_elems.end();
--dum_it;
int target_dim = CN::Dimension( TYPE_FROM_HANDLE( *dum_it ) );
dum_it = neuset_elems.begin();
while( target_dim != CN::Dimension( TYPE_FROM_HANDLE( *dum_it ) ) && dum_it != neuset_elems.end() )<--- Possible dereference of an invalid iterator: dum_it [+]Possible dereference of an invalid iterator: dum_it. Make sure to check that the iterator is valid before dereferencing it - not after.
++dum_it;
if( current_sense == 1 || current_sense == 0 )
std::copy( dum_it, neuset_elems.end(), range_inserter( forward_elems ) );
if( current_sense == -1 || current_sense == 0 )
std::copy( dum_it, neuset_elems.end(), range_inserter( reverse_elems ) );
// Now loop over the contained meshsets, getting the sense of those and calling this
// function recursively
for( range_iter = neuset_meshsets.begin(); range_iter != neuset_meshsets.end(); ++range_iter )
{
// First get the sense; if it's not there, by convention it's forward
int this_sense;
if( 0 == sense_tag || MB_FAILURE == mbImpl->tag_get_data( sense_tag, &( *range_iter ), 1, &this_sense ) )
this_sense = 1;
// Now get all the entities on this meshset, with the proper (possibly reversed) sense
get_neuset_elems( *range_iter, this_sense * current_sense, forward_elems, reverse_elems );
}
return result;
}
} // namespace moab
|