Sparse tag data. More...

#include <SparseTag.hpp>

Inheritance diagram for moab::SparseTag:

Collaboration diagram for moab::SparseTag:

Public Types
typedef MOAB_UNORDERED_MAP_NS::unordered_map < EntityHandle, void * >	MapType
	map of entity id and tag data
Public Member Functions
	SparseTag (const char name, int size, DataType type, const void default_value)
	~SparseTag ()
virtual TagType	get_storage_type () const
virtual ErrorCode	release_all_data (SequenceManager seqman, Error error_handler, bool delete_pending)
	Remove/clear tag data for all entities.
virtual ErrorCode	get_data (const SequenceManager seqman, Error error_handler, const EntityHandle entities, size_t num_entities, void data) const
	Get tag value for passed entities.
virtual ErrorCode	get_data (const SequenceManager seqman, Error error_handler, const Range &entities, void *data) const
	Get tag value for passed entities.
virtual ErrorCode	get_data (const SequenceManager seqman, Error error_handler, const EntityHandle entities, size_t num_entities, const void data_ptrs, int data_lengths) const
	Get tag value for passed entities.
virtual ErrorCode	get_data (const SequenceManager seqman, Error error_handler, const Range &entities, const void *data_ptrs, int data_lengths) const
	Get tag value for passed entities.
virtual ErrorCode	set_data (SequenceManager seqman, Error error_handler, const EntityHandle entities, size_t num_entities, const void data)
	Set tag value for passed entities.
virtual ErrorCode	set_data (SequenceManager seqman, Error error_handler, const Range &entities, const void *data)
	Set tag value for passed entities.
virtual ErrorCode	set_data (SequenceManager seqman, Error error_handler, const EntityHandle entities, size_t num_entities, void const const data_ptrs, const int data_lengths)
	Set tag value for passed entities.
virtual ErrorCode	set_data (SequenceManager seqman, Error error_handler, const Range &entities, void const const data_ptrs, const int *data_lengths)
	Set tag value for passed entities.
virtual ErrorCode	clear_data (SequenceManager seqman, Error error_handler, const EntityHandle entities, size_t num_entities, const void value_ptr, int value_len=0)
	Set tag value for passed entities.
virtual ErrorCode	clear_data (SequenceManager seqman, Error error_handler, const Range &entities, const void *value_ptr, int value_len=0)
	Set tag value for passed entities.
virtual ErrorCode	remove_data (SequenceManager seqman, Error error_handler, const EntityHandle *entities, size_t num_entities)
	Remove/clear tag data for entities.
virtual ErrorCode	remove_data (SequenceManager seqman, Error error_handler, const Range &entities)
	Remove/clear tag data for entities.
virtual ErrorCode	tag_iterate (SequenceManager seqman, Error error_handler, Range::iterator &iter, const Range::iterator &end, void *&data_ptr, bool allocate=true)
	Access tag data via direct pointer into contiguous blocks.
virtual ErrorCode	get_tagged_entities (const SequenceManager seqman, Range &output_entities, EntityType type=MBMAXTYPE, const Range intersect=0) const
	Get all tagged entities.
virtual ErrorCode	num_tagged_entities (const SequenceManager seqman, size_t &output_count, EntityType type=MBMAXTYPE, const Range intersect=0) const
	Count all tagged entities.
virtual ErrorCode	find_entities_with_value (const SequenceManager seqman, Error error_handler, Range &output_entities, const void value, int value_bytes=0, EntityType type=MBMAXTYPE, const Range intersect_entities=0) const
	Get all tagged entities with tag value.
virtual bool	is_tagged (const SequenceManager *, EntityHandle h) const
	Check if entity is tagged.
virtual ErrorCode	get_memory_use (const SequenceManager *seqman, unsigned long &total, unsigned long &per_entity) const
	Get memory use for tag data.
unsigned long	get_number_entities ()
	get number of entities
Private Member Functions
	SparseTag (const SparseTag &)
SparseTag &	operator= (const SparseTag &)
void *	allocate_data (EntityHandle h, MapType::const_iterator iter, bool copy_default=true)
	allocate an entry for this sparse tag w/o setting its value (yet)
ErrorCode	set_data (Error , EntityHandle entity_handle, const void data)
ErrorCode	get_data (Error , EntityHandle entity_handle, void data) const
ErrorCode	get_data_ptr (EntityHandle entity_handle, const void *&data, bool allocate=true) const
	get the variable-length data for an entity id
ErrorCode	remove_data (Error *, EntityHandle entity_handle)
	removes the data
Private Attributes
SparseTagDataAllocator	mAllocator
	allocator for this collection
MapType	mData

Detailed Description

Sparse tag data.

Definition at line 64 of file SparseTag.hpp.

Member Typedef Documentation

typedef MOAB_UNORDERED_MAP_NS::unordered_map< EntityHandle, void* > moab::SparseTag::MapType

map of entity id and tag data

Definition at line 393 of file SparseTag.hpp.

Constructor & Destructor Documentation

moab::SparseTag::SparseTag	(	const char *	name,
		int	size,
		DataType	type,
		const void *	default_value
	)

Definition at line 31 of file SparseTag.cpp.

    : TagInfo( name, size, type, default_value, size )
{
}

moab::SparseTag::~SparseTag ( )

Definition at line 36 of file SparseTag.cpp.

References release_all_data().

{
    release_all_data( 0, 0, true );
}

moab::SparseTag::SparseTag ( const SparseTag & ) [private]

Member Function Documentation

void * moab::SparseTag::allocate_data	(	EntityHandle	h,
		MapType::const_iterator	iter,
		bool	copy_default = `true`
	)		`[inline, private]`

allocate an entry for this sparse tag w/o setting its value (yet)

Definition at line 427 of file SparseTag.hpp.

References moab::SparseTagDataAllocator::allocate(), moab::TagInfo::get_default_value(), moab::TagInfo::get_size(), mAllocator, and mData.

Referenced by set_data(), and tag_iterate().

{
    void* new_data = mAllocator.allocate( get_size() );
#ifdef MOAB_HAVE_UNORDERED_MAP
    mData.insert( iter, std::pair< const EntityHandle, void* >( h, new_data ) );
#else
    mData[h] = new_data;
#endif
    if( copy_default ) memcpy( new_data, get_default_value(), get_size() );
    return new_data;
}

ErrorCode moab::SparseTag::clear_data	(	SequenceManager *	seqman,
		Error *	error_handler,
		const EntityHandle *	entities,
		size_t	num_entities,
		const void *	value_ptr,
		int	value_len = `0`
	)		`[virtual]`

Set tag value for passed entities.

Store tag data or update stored tag values.

Parameters:

seqman	Pointer to mesh entity database
entities	Entity handles for which to store tag data
num_entities	Length of `entities` array
value_ptr	Pointer to a single tag value which is to be stored for each of the passed entities.
value_len	Length of tag value in bytes. Ignored for fixed-length tags. Required for variable- length tags.

Implements moab::TagInfo.

Definition at line 275 of file SparseTag.cpp.

References moab::SequenceManager::check_valid_entities(), ErrorCode, moab::TagInfo::get_name(), moab::TagInfo::get_size(), MB_CHK_ERR, MB_INVALID_SIZE, MB_SET_ERR, MB_SUCCESS, and set_data().

{
    if( value_len && value_len != get_size() )
    {
        MB_SET_ERR( MB_INVALID_SIZE, "Invalid data size " << get_size() << " specified for sparse tag " << get_name()
                                                          << " of size " << value_len );
    }

    ErrorCode rval = seqman->check_valid_entities( NULL, entities, num_entities, true );MB_CHK_ERR( rval );

    for( size_t i = 0; i < num_entities; ++i )
    {
        rval = set_data( NULL, entities[i], value_ptr );MB_CHK_ERR( rval );
    }

    return MB_SUCCESS;
}

ErrorCode moab::SparseTag::clear_data	(	SequenceManager *	seqman,
		Error *	error_handler,
		const Range &	entities,
		const void *	value_ptr,
		int	value_len = `0`
	)		`[virtual]`

Set tag value for passed entities.

Store tag data or update stored tag values.

Parameters:

seqman	Pointer to mesh entity database
entities	Entity handles for which to store tag data
value_ptr	Pointer to a single tag value which is to be stored for each of the passed entities.
value_len	Length of tag value in bytes. Ignored for fixed-length tags. Required for variable- length tags.

Implements moab::TagInfo.

Definition at line 298 of file SparseTag.cpp.

References moab::Range::begin(), moab::SequenceManager::check_valid_entities(), moab::Range::end(), ErrorCode, moab::TagInfo::get_name(), moab::TagInfo::get_size(), MB_CHK_ERR, MB_INVALID_SIZE, MB_SET_ERR, MB_SUCCESS, and set_data().

{
    if( value_len && value_len != get_size() )
    {
        MB_SET_ERR( MB_INVALID_SIZE, "Invalid data size " << get_size() << " specified for sparse tag " << get_name()
                                                          << " of size " << value_len );
    }

    ErrorCode rval = seqman->check_valid_entities( NULL, entities );MB_CHK_ERR( rval );

    Range::const_iterator i;
    for( i = entities.begin(); i != entities.end(); ++i )
    {
        rval = set_data( NULL, *i, value_ptr );MB_CHK_ERR( rval );
    }

    return MB_SUCCESS;
}

ErrorCode moab::SparseTag::find_entities_with_value	(	const SequenceManager *	seqman,
		Error *	error_handler,
		Range &	output_entities,
		const void *	value,
		int	value_bytes = `0`,
		EntityType	type = `MBMAXTYPE`,
		const Range *	intersect_entities = `0`
	)		const `[virtual]`

Get all tagged entities with tag value.

Get the list of entities which have the specified tag value.

Parameters:

seqman	Pointer to entity storage database
output_entities	Results appended to this range
value	Pointer to tag value
value_bytes	Size of tag value in bytes.
type	Optional entity type. If specified, search is limited to entities of specified type.
intersect_entities	Optional intersect list. If specified, search is restricted to entities in this list.

Implements moab::TagInfo.

Definition at line 462 of file SparseTag.cpp.

References moab::Range::begin(), moab::CREATE_HANDLE(), moab::Range::end(), moab::Range::equal_range(), moab::find_map_values_equal(), moab::find_tag_values_equal(), moab::TagInfo::get_name(), moab::TagInfo::get_size(), MB_END_ID, MB_INVALID_SIZE, MB_SET_ERR, MB_START_ID, MB_SUCCESS, MBMAXTYPE, and mData.

{
    if( value_bytes && value_bytes != get_size() )
    {
        MB_SET_ERR( MB_INVALID_SIZE, "Invalid data size " << get_size() << " specified for sparse tag " << get_name()
                                                          << " of size " << value_bytes );
    }

    MapType::const_iterator iter, end;
#ifdef MOAB_HAVE_UNORDERED_MAP
    if( intersect_entities )
    {
        std::pair< Range::iterator, Range::iterator > r;
        if( type == MBMAXTYPE )
        {
            r.first  = intersect_entities->begin();
            r.second = intersect_entities->end();
        }
        else
        {
            r = intersect_entities->equal_range( type );
        }

        find_map_values_equal( *this, value, get_size(), r.first, r.second, mData, output_entities );
    }
    else if( type == MBMAXTYPE )
    {
        find_tag_values_equal( *this, value, get_size(), mData.begin(), mData.end(), output_entities );
    }
    else
    {
        Range tmp;
        seqman->get_entities( type, tmp );
        find_map_values_equal( *this, value, get_size(), tmp.begin(), tmp.end(), mData, output_entities );
    }
#else
    if( intersect_entities )
    {
        for( Range::const_pair_iterator p = intersect_entities->begin(); p != intersect_entities->end(); ++p )
        {
            iter = mData.lower_bound( p->first );
            end = mData.upper_bound( p->second );
            find_tag_values_equal( *this, value, get_size(), iter, end, output_entities );
        }
    }
    else
    {
        if( type == MBMAXTYPE )
        {
            iter = mData.begin();
            end = mData.end();
        }
        else
        {
            iter = mData.lower_bound( CREATE_HANDLE( type, MB_START_ID ) );
            end = mData.upper_bound( CREATE_HANDLE( type, MB_END_ID ) );
        }
        find_tag_values_equal( *this, value, get_size(), iter, end, output_entities );
    }
#endif

    return MB_SUCCESS;
}

ErrorCode moab::SparseTag::get_data	(	const SequenceManager *	seqman,
		Error *	error_handler,
		const EntityHandle *	entities,
		size_t	num_entities,
		void *	data
	)		const `[virtual]`

Get tag value for passed entities.

Get tag values for specified entities.

Will fail for variable-length data.

Parameters:

seqman	Pointer to mesh entity database
entities	Entity handles for which to retrieve tag data
num_entities	Length of `entities` array
data	Pointer to memory in which to store consecutive tag values, one for each passed entity.

Implements moab::TagInfo.

Definition at line 117 of file SparseTag.cpp.

References ErrorCode, moab::TagInfo::get_size(), and MB_SUCCESS.

Referenced by get_data().

{
    ErrorCode rval;
    unsigned char* ptr = reinterpret_cast< unsigned char* >( data );
    for( size_t i = 0; i < num_entities; ++i, ptr += get_size() )
    {
        rval = get_data( NULL, entities[i], ptr );
        if( MB_SUCCESS != rval ) return rval;
    }

    return MB_SUCCESS;
}

ErrorCode moab::SparseTag::get_data	(	const SequenceManager *	seqman,
		Error *	error_handler,
		const Range &	entities,
		void *	data
	)		const `[virtual]`

Get tag value for passed entities.

Get tag values for specified entities.

Will fail for variable-length data.

Parameters:

seqman	Pointer to mesh entity database
entities	Entity handles for which to retrieve tag data
data	Pointer to memory in which to store consecutive tag values, one for each passed entity.

Implements moab::TagInfo.

Definition at line 134 of file SparseTag.cpp.

References moab::Range::begin(), moab::Range::end(), ErrorCode, get_data(), moab::TagInfo::get_size(), and MB_SUCCESS.

{
    ErrorCode rval;
    unsigned char* ptr = reinterpret_cast< unsigned char* >( data );
    Range::const_iterator i;
    for( i = entities.begin(); i != entities.end(); ++i, ptr += get_size() )
    {
        rval = get_data( NULL, *i, ptr );
        if( MB_SUCCESS != rval ) return rval;
    }

    return MB_SUCCESS;
}

ErrorCode moab::SparseTag::get_data	(	const SequenceManager *	seqman,
		Error *	error_handler,
		const EntityHandle *	entities,
		size_t	num_entities,
		const void **	data_ptrs,
		int *	data_lengths
	)		const `[virtual]`

Get tag value for passed entities.

Get tag values for specified entities.

Parameters:

seqman	Pointer to mesh entity database
entities	Entity handles for which to retrieve tag data
num_entities	Length of `entities` array
data_ptrs	Array of pointers to tag values, one pointer for each passed entity.
data_lengths	One value for each entity specifying the length of the tag value for the corresponding entity.

Implements moab::TagInfo.

Definition at line 148 of file SparseTag.cpp.

References ErrorCode, get_data_ptr(), moab::TagInfo::get_default_value(), moab::TagInfo::get_size(), MB_SUCCESS, MB_TAG_NOT_FOUND, and moab::SysUtil::setmem().

{
    if( data_lengths )
    {
        int len = get_size();
        SysUtil::setmem( data_lengths, &len, sizeof( int ), num_entities );
    }

    ErrorCode rval = MB_SUCCESS, rval_tmp;
    for( size_t i = 0; i < num_entities; ++i, ++pointers )
    {
        rval_tmp = get_data_ptr( entities[i], *pointers );
        if( MB_SUCCESS != rval_tmp && get_default_value() )
        {
            *pointers = get_default_value();
        }
        else if( MB_SUCCESS != rval_tmp )
        {
            return MB_TAG_NOT_FOUND;
        }
    }

    return rval;
}

ErrorCode moab::SparseTag::get_data	(	const SequenceManager *	seqman,
		Error *	error_handler,
		const Range &	entities,
		const void **	data_ptrs,
		int *	data_lengths
	)		const `[virtual]`

Get tag value for passed entities.

Get tag values for specified entities.

Parameters:

seqman	Pointer to mesh entity database
entities	Entity handles for which to retrieve tag data
data_ptrs	Array of pointers to tag values, one pointer for each passed entity.
data_lengths	One value for each entity specifying the length of the tag value for the corresponding entity.

Implements moab::TagInfo.

Definition at line 178 of file SparseTag.cpp.

References moab::Range::begin(), moab::Range::end(), ErrorCode, get_data_ptr(), moab::TagInfo::get_default_value(), moab::TagInfo::get_size(), MB_SUCCESS, MB_TAG_NOT_FOUND, moab::SysUtil::setmem(), and moab::Range::size().

{
    if( data_lengths )
    {
        int len = get_size();
        SysUtil::setmem( data_lengths, &len, sizeof( int ), entities.size() );
    }

    ErrorCode rval = MB_SUCCESS, rval_tmp;
    Range::const_iterator i;
    for( i = entities.begin(); i != entities.end(); ++i, ++pointers )
    {
        rval_tmp = get_data_ptr( *i, *pointers );
        if( MB_SUCCESS != rval_tmp && get_default_value() )
        {
            *pointers = get_default_value();
        }
        else if( MB_SUCCESS != rval_tmp )
        {
            return MB_TAG_NOT_FOUND;
        }
    }

    return rval;
}

ErrorCode moab::SparseTag::get_data	(	Error *	,
		EntityHandle	entity_handle,
		void *	data
	)		const `[inline, private]`

get the tag data for an entity id Will fail with MB_VARIABLE_DATA_LENGTH if called for variable-length tag.

Definition at line 88 of file SparseTag.cpp.

References ErrorCode, get_data_ptr(), moab::TagInfo::get_default_value(), moab::TagInfo::get_size(), MB_SUCCESS, and MB_TAG_NOT_FOUND.

{
    const void* ptr = 0;
    ErrorCode rval  = get_data_ptr( entity_handle, ptr, false );
    if( MB_SUCCESS == rval )
    {
        memcpy( data, ptr, get_size() );
        return rval;
    }
    else if( get_default_value() )
    {
        memcpy( data, get_default_value(), get_size() );
        return MB_SUCCESS;
    }
    else
        return MB_TAG_NOT_FOUND;
}

ErrorCode moab::SparseTag::get_data_ptr	(	EntityHandle	entity_handle,
		const void *&	data,
		bool	allocate = `true`
	)		const `[inline, private]`

get the variable-length data for an entity id

Definition at line 74 of file SparseTag.cpp.

References moab::TagInfo::get_default_value(), MB_SUCCESS, and mData.

Referenced by get_data(), and tag_iterate().

{
    MapType::const_iterator iter = mData.find( entity_handle );

    if( iter != mData.end() )
        ptr = iter->second;
    else if( get_default_value() && allocate )
        ptr = const_cast< SparseTag* >( this )->allocate_data( entity_handle, iter, allocate );
    else
        return MB_FAILURE;

    return MB_SUCCESS;
}

ErrorCode moab::SparseTag::get_memory_use	(	const SequenceManager *	seqman,
		unsigned long &	total,
		unsigned long &	per_entity
	)		const `[virtual]`

Get memory use for tag data.

Implements moab::TagInfo.

Definition at line 542 of file SparseTag.cpp.

References moab::TagInfo::get_memory_use(), moab::TagInfo::get_size(), MB_SUCCESS, and mData.

{
    per_entity = get_size() + 4 * sizeof( void* );
    total      = ( mData.size() * per_entity ) + sizeof( *this ) + TagInfo::get_memory_use();

    return MB_SUCCESS;
}

unsigned long moab::SparseTag::get_number_entities ( ) [inline]

get number of entities

Definition at line 386 of file SparseTag.hpp.

References mData.

    {
        return mData.size();
    }

TagType moab::SparseTag::get_storage_type ( ) const [virtual]

Implements moab::TagInfo.

Definition at line 41 of file SparseTag.cpp.

References MB_TAG_SPARSE.

{
    return MB_TAG_SPARSE;
}

ErrorCode moab::SparseTag::get_tagged_entities	(	const SequenceManager *	seqman,
		Range &	output_entities,
		EntityType	type = `MBMAXTYPE`,
		const Range *	intersect = `0`
	)		const `[virtual]`

Get all tagged entities.

Gets all entity handles that match a type and tag.

Get the list of entities for which the a tag value has been set, or a close approximation if the tag storage scheme cannot accurately determine exactly which entities have explicit values.

Parameters:

seqman	Pointer to entity storage database
output_entities	Results appended to this range
type	Optional entity type. If specified, search is limited to entities of specified type.
intersect	Optional intersect list. If specified, search is restricted to entities in this list.

Implements moab::TagInfo.

Definition at line 441 of file SparseTag.cpp.

References moab::get_tagged(), MB_SUCCESS, and mData.

Referenced by moab::WriteDamsel::map_sparse_tags().

{
    get_tagged( mData, output_range, type, intersect );
    return MB_SUCCESS;
}

bool moab::SparseTag::is_tagged	(	const SequenceManager *	,
		EntityHandle	h
	)		const `[virtual]`

Check if entity is tagged.

Implements moab::TagInfo.

Definition at line 537 of file SparseTag.cpp.

References mData.

{
    return mData.find( h ) != mData.end();
}

ErrorCode moab::SparseTag::num_tagged_entities	(	const SequenceManager *	seqman,
		size_t &	output_count,
		EntityType	type = `MBMAXTYPE`,
		const Range *	intersect = `0`
	)		const `[virtual]`

Count all tagged entities.

Gets all entity handles that match a type and tag.

Count the entities for which the a tag value has been set, or a close approximation if the tag storage scheme cannot accurately determine exactly which entities have explicit values.

Parameters:

seqman	Pointer to entity storage database
output_count	This is incremented for each detected entity.
type	Optional entity type. If specified, search is limited to entities of specified type.
intersect	Optional intersect list. If specified, search is restricted to entities in this list.

Implements moab::TagInfo.

Definition at line 451 of file SparseTag.cpp.

References moab::InsertCount::end(), moab::get_tagged(), MB_SUCCESS, and mData.

{
    InsertCount counter( output_count );
    get_tagged( mData, counter, type, intersect );
    output_count = counter.end();
    return MB_SUCCESS;
}

SparseTag& moab::SparseTag::operator= ( const SparseTag & ) [private]

ErrorCode moab::SparseTag::release_all_data	(	SequenceManager *	seqman,
		Error *	error_handler,
		bool	delete_pending
	)		`[virtual]`

Remove/clear tag data for all entities.

Remove tag values from entities.

Parameters:

delete_pending If true, then release any global data associated with the tag in preparation for deleting the tag itself.

Invalidates tag if tag_delete_pending is true. The only valid method that can be invoked that is is the destructor.

Parameters:

seqman Pointer to mesh entity database

Implements moab::TagInfo.

Definition at line 46 of file SparseTag.cpp.

References moab::SparseTagDataAllocator::destroy(), mAllocator, MB_SUCCESS, and mData.

Referenced by ~SparseTag().

{
    for( MapType::iterator i = mData.begin(); i != mData.end(); ++i )
        mAllocator.destroy( i->second );
    mData.clear();
    return MB_SUCCESS;
}

ErrorCode moab::SparseTag::remove_data	(	SequenceManager *	seqman,
		Error *	error_handler,
		const EntityHandle *	entities,
		size_t	num_entities
	)		`[virtual]`

Remove/clear tag data for entities.

Remove tag values from entities.

Parameters:

seqman	Pointer to mesh entity database
entities	Entity handles for which to store tag data
num_entities	Length of `entities` array

Implements moab::TagInfo.

Definition at line 321 of file SparseTag.cpp.

References ErrorCode, and MB_SUCCESS.

Referenced by remove_data().

{
    ErrorCode rval;
    for( size_t i = 0; i < num_entities; ++i )
    {
        rval = remove_data( NULL, entities[i] );
        if( MB_SUCCESS != rval ) return rval;
    }

    return MB_SUCCESS;
}

ErrorCode moab::SparseTag::remove_data	(	SequenceManager *	seqman,
		Error *	error_handler,
		const Range &	entities
	)		`[virtual]`

Remove/clear tag data for entities.

Remove tag values from entities.

Parameters:

seqman	Pointer to mesh entity database
entities	Entity handles for which to store tag data

Implements moab::TagInfo.

Definition at line 336 of file SparseTag.cpp.

References moab::Range::begin(), moab::Range::end(), MB_SUCCESS, MB_TAG_NOT_FOUND, and remove_data().

{
    for( Range::const_iterator i = entities.begin(); i != entities.end(); ++i )
        if( MB_SUCCESS != remove_data( NULL, *i ) ) return MB_TAG_NOT_FOUND;

    return MB_SUCCESS;
}

ErrorCode moab::SparseTag::remove_data	(	Error *	,
		EntityHandle	entity_handle
	)		`[inline, private]`

removes the data

Definition at line 106 of file SparseTag.cpp.

References moab::SparseTagDataAllocator::destroy(), mAllocator, MB_SUCCESS, MB_TAG_NOT_FOUND, and mData.

{
    MapType::iterator i = mData.find( entity_handle );
    if( i == mData.end() ) return MB_TAG_NOT_FOUND;

    mAllocator.destroy( i->second );
    mData.erase( i );

    return MB_SUCCESS;
}

ErrorCode moab::SparseTag::set_data	(	SequenceManager *	seqman,
		Error *	error_handler,
		const EntityHandle *	entities,
		size_t	num_entities,
		const void *	data
	)		`[virtual]`

Set tag value for passed entities.

Store tag data or update stored tag values Will fail for variable-length data.

Parameters:

seqman	Pointer to mesh entity database
entities	Entity handles for which to store tag data
num_entities	Length of `entities` array
data	Pointer to memory holding consecutive tag values, one for each passed entity.

Implements moab::TagInfo.

Definition at line 208 of file SparseTag.cpp.

References moab::SequenceManager::check_valid_entities(), ErrorCode, moab::TagInfo::get_size(), MB_CHK_ERR, and MB_SUCCESS.

Referenced by clear_data(), and set_data().

{
    ErrorCode rval = seqman->check_valid_entities( NULL, entities, num_entities, true );MB_CHK_ERR( rval );

    const unsigned char* ptr = reinterpret_cast< const unsigned char* >( data );
    for( size_t i = 0; i < num_entities; ++i, ptr += get_size() )
    {
        rval = set_data( NULL, entities[i], ptr );MB_CHK_ERR( rval );
    }

    return MB_SUCCESS;
}

ErrorCode moab::SparseTag::set_data	(	SequenceManager *	seqman,
		Error *	error_handler,
		const Range &	entities,
		const void *	data
	)		`[virtual]`

Set tag value for passed entities.

Store tag data or update stored tag values Will fail for variable-length data.

Parameters:

seqman	Pointer to mesh entity database
entities	Entity handles for which to store tag data
data	Pointer to memory holding consecutive tag values, one for each passed entity.

Implements moab::TagInfo.

Definition at line 225 of file SparseTag.cpp.

References moab::Range::begin(), moab::SequenceManager::check_valid_entities(), moab::Range::end(), ErrorCode, moab::TagInfo::get_size(), MB_CHK_ERR, MB_SUCCESS, and set_data().

{
    ErrorCode rval = seqman->check_valid_entities( NULL, entities );MB_CHK_ERR( rval );

    const unsigned char* ptr = reinterpret_cast< const unsigned char* >( data );
    Range::const_iterator i;
    for( i = entities.begin(); i != entities.end(); ++i, ptr += get_size() )
        if( MB_SUCCESS != ( rval = set_data( NULL, *i, ptr ) ) ) return rval;

    return MB_SUCCESS;
}

ErrorCode moab::SparseTag::set_data	(	SequenceManager *	seqman,
		Error *	error_handler,
		const EntityHandle *	entities,
		size_t	num_entities,
		void const const	data_ptrs,
		const int *	data_lengths
	)		`[virtual]`

Set tag value for passed entities.

Store tag data or update stored tag values

Parameters:

seqman	Pointer to mesh entity database
entities	Entity handles for which to store tag data
num_entities	Length of `entities` array
data_ptrs	Array of pointers to tag values, one pointer for each passed entity.
data_lengths	One value for each entity specifying the length of the tag value for the corresponding entity. Array is required for variable-length tags and is ignored for fixed-length tags.

Implements moab::TagInfo.

Definition at line 237 of file SparseTag.cpp.

References moab::SequenceManager::check_valid_entities(), ErrorCode, MB_CHK_ERR, MB_SUCCESS, set_data(), and moab::TagInfo::validate_lengths().

{
    ErrorCode rval = validate_lengths( NULL, lengths, num_entities );MB_CHK_ERR( rval );

    rval = seqman->check_valid_entities( NULL, entities, num_entities, true );MB_CHK_ERR( rval );

    for( size_t i = 0; i < num_entities; ++i, ++pointers )
    {
        rval = set_data( NULL, entities[i], *pointers );MB_CHK_ERR( rval );
    }

    return MB_SUCCESS;
}

ErrorCode moab::SparseTag::set_data	(	SequenceManager *	seqman,
		Error *	error_handler,
		const Range &	entities,
		void const const	data_ptrs,
		const int *	data_lengths
	)		`[virtual]`

Set tag value for passed entities.

Store tag data or update stored tag values

Parameters:

seqman	Pointer to mesh entity database
entities	Entity handles for which to store tag data
data_ptrs	Array of pointers to tag values, one pointer for each passed entity.
data_lengths	One value for each entity specifying the length of the tag value for the corresponding entity. Array is required for variable-length tags and is ignored for fixed-length tags.

Implements moab::TagInfo.

Definition at line 256 of file SparseTag.cpp.

References moab::Range::begin(), moab::SequenceManager::check_valid_entities(), moab::Range::end(), ErrorCode, MB_CHK_ERR, MB_SUCCESS, set_data(), moab::Range::size(), and moab::TagInfo::validate_lengths().

{
    ErrorCode rval = validate_lengths( NULL, lengths, entities.size() );MB_CHK_ERR( rval );

    rval = seqman->check_valid_entities( NULL, entities );MB_CHK_ERR( rval );

    Range::const_iterator i;
    for( i = entities.begin(); i != entities.end(); ++i, ++pointers )
    {
        rval = set_data( NULL, *i, *pointers );MB_CHK_ERR( rval );
    }

    return MB_SUCCESS;
}

ErrorCode moab::SparseTag::set_data	(	Error *	,
		EntityHandle	entity_handle,
		const void *	data
	)		`[inline, private]`

set the tag data for an entity id Will fail with MB_VARIABLE_DATA_LENGTH if called for variable-length tag.

Definition at line 54 of file SparseTag.cpp.

References allocate_data(), moab::TagInfo::get_size(), MB_SUCCESS, and mData.

{
#ifdef MOAB_HAVE_UNORDERED_MAP
    MapType::iterator iter = mData.find( entity_handle );
#else
    MapType::iterator iter = mData.lower_bound( entity_handle );
#endif

    // Data space already exists
    if( iter != mData.end() && iter->first == entity_handle ) memcpy( iter->second, data, get_size() );
    // We need to make some data space
    else
    {
        void* new_data = allocate_data( entity_handle, iter, false );
        memcpy( new_data, data, get_size() );
    }

    return MB_SUCCESS;
}

ErrorCode moab::SparseTag::tag_iterate	(	SequenceManager *	seqman,
		Error *	error_handler,
		Range::iterator &	iter,
		const Range::iterator &	end,
		void *&	data_ptr,
		bool	allocate = `true`
	)		`[virtual]`

Access tag data via direct pointer into contiguous blocks.

Iteratively obtain direct access to contiguous blocks of tag storage. This function cannot be used with bit tags because of the compressed bit storage. This function cannot be used with variable length tags because it does not provide a mechanism to determine the length of the value for each entity. This function may be used with sparse tags, but if it is used, it will return data for a single entity at a time.

Parameters:

iter	As input, the first entity for which to return data. As output, one past the last entity for which data was returned.
end	One past the last entity for which data is desired
data_ptr	Output: pointer to tag storage.
allocate	If true, space for this tag will be allocated, if not it wont

If this function is called for entities for which no tag value has been set, but for which a default value exists, it will force the allocation of explicit storage for each such entity even though MOAB would normally not explicitly store tag values for such entities.

Implements moab::TagInfo.

Definition at line 344 of file SparseTag.cpp.

References allocate_data(), moab::SequenceManager::check_valid_entities(), ErrorCode, get_data_ptr(), moab::TagInfo::get_default_value(), MB_CHK_ERR, MB_SUCCESS, and mData.

{
    // Note: We are asked to returning a block of contiguous storage
    //       for some block of contiguous handles for which the tag
    //       storage is also contiguous. As sparse tag storage is
    //       never contiguous, all we can do is return a pointer to the
    //       data for the first entity.

    // If asked for nothing, successfully return nothing.
    if( iter == end ) return MB_SUCCESS;

    // Note: get_data_ptr will return the default value if the
    //       handle is not found, so test to make sure that the
    //       handle is valid.
    ErrorCode rval = seqman->check_valid_entities( NULL, &*iter, 1 );MB_CHK_ERR( rval );

    // Get pointer to tag storage for entity pointed to by iter
    const void* ptr = NULL;
    rval            = get_data_ptr( *iter, ptr );
    if( MB_SUCCESS == rval )
        data_ptr = const_cast< void* >( ptr );
    else if( get_default_value() && allocate )
    {
        ptr      = allocate_data( *iter, mData.end() );
        data_ptr = const_cast< void* >( ptr );
    }
    else
    {
        // If allocation was not requested, need to increment the iterator so that
        // the count can be computed properly
        if( get_default_value() && !allocate ) ++iter;
        // return not_found(get_name(), *iter);
    }

    // Increment iterator and return
    ++iter;
    return MB_SUCCESS;
}

Member Data Documentation

SparseTagDataAllocator moab::SparseTag::mAllocator [private]

allocator for this collection

Definition at line 422 of file SparseTag.hpp.

Referenced by allocate_data(), release_all_data(), and remove_data().

MapType moab::SparseTag::mData [private]

Definition at line 424 of file SparseTag.hpp.

Referenced by allocate_data(), find_entities_with_value(), get_data_ptr(), get_memory_use(), get_number_entities(), get_tagged_entities(), is_tagged(), num_tagged_entities(), release_all_data(), remove_data(), set_data(), and tag_iterate().

List of all members.

The documentation for this class was generated from the following files:

Public Types

Public Member Functions

Private Member Functions

Private Attributes

Detailed Description

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation