Mesh Oriented datABase
(version 5.4.1)
Array-based unstructured mesh datastructure
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00001 /* 00002 * MOAB, a Mesh-Oriented datABase, is a software component for creating, 00003 * storing and accessing finite element mesh data. 00004 * 00005 * Copyright 2004 Sandia Corporation. Under the terms of Contract 00006 * DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government 00007 * retains certain rights in this software. 00008 * 00009 * This library is free software; you can redistribute it and/or 00010 * modify it under the terms of the GNU Lesser General Public 00011 * License as published by the Free Software Foundation; either 00012 * version 2.1 of the License, or (at your option) any later version. 00013 * 00014 */ 00015 00016 /**\file BSPTree.hpp 00017 *\author Jason Kraftcheck ([email protected]) 00018 *\date 2008-05-12 00019 */ 00020 00021 #ifndef MOAB_BSP_TREE_HPP 00022 #define MOAB_BSP_TREE_HPP 00023 00024 #include "moab/Types.hpp" 00025 #include "moab/Interface.hpp" 00026 00027 #include <cmath> 00028 #include <string> 00029 #include <vector> 00030 00031 namespace moab 00032 { 00033 00034 class BSPTreeBoxIter; 00035 class BSPTreeIter; 00036 class Range; 00037 class BSPTreePoly; 00038 00039 /** \class BSPTree 00040 * \brief BSP tree, for sorting and searching entities spatially 00041 */ 00042 class BSPTree 00043 { 00044 private: 00045 Interface* mbInstance; 00046 Tag planeTag, rootTag; 00047 unsigned meshSetFlags; 00048 bool cleanUpTrees; 00049 std::vector< EntityHandle > createdTrees; 00050 00051 ErrorCode init_tags( const char* tagname = 0 ); 00052 00053 public: 00054 static double epsilon() 00055 { 00056 return 1e-6; 00057 } 00058 00059 BSPTree( Interface* iface, const char* tagname = 0, unsigned meshset_creation_flags = MESHSET_SET ); 00060 00061 BSPTree( Interface* iface, 00062 bool destroy_created_trees, 00063 const char* tagname = 0, 00064 unsigned meshset_creation_flags = MESHSET_SET ); 00065 00066 ~BSPTree(); 00067 00068 //! Enumerate split plane directions 00069 enum Axis 00070 { 00071 X = 0, 00072 Y = 1, 00073 Z = 2 00074 }; 00075 00076 /**\brief struct to store a plane 00077 * 00078 * If plane is defined as Ax+By+Cz+D=0, then 00079 * norm={A,B,C} and coeff=-D. 00080 */ 00081 struct Plane 00082 { 00083 Plane() : coeff( 0.0 ) {} 00084 Plane( const double n[3], double d ) : coeff( d ) 00085 { 00086 norm[0] = n[0]; 00087 norm[1] = n[1]; 00088 norm[2] = n[2]; 00089 } 00090 /** a x + b y + c z + d = 0 */ 00091 Plane( double a, double b, double c, double d ) : coeff( d ) 00092 { 00093 norm[0] = a; 00094 norm[1] = b; 00095 norm[2] = c; 00096 } 00097 /** Create Y = 1 plane by doing Plane( Y, 1.0 ); */ 00098 Plane( Axis normal, double point_on_axis ) : coeff( -point_on_axis ) 00099 { 00100 norm[0] = norm[1] = norm[2] = 0; 00101 norm[normal] = 1.0; 00102 } 00103 00104 double norm[3]; //!< Unit normal of plane 00105 double coeff; //!< norm[0]*x + norm[1]*y + norm[2]*z + coeff = 0 00106 00107 /** Signed distance from point to plane: 00108 * absolute value is distance from point to plane 00109 * positive if 'above' plane, negative if 'below' 00110 * Note: assumes unit-length normal. 00111 */ 00112 double signed_distance( const double point[3] ) const 00113 { 00114 return point[0] * norm[0] + point[1] * norm[1] + point[2] * norm[2] + coeff; 00115 } 00116 00117 /** return true if point is below the plane */ 00118 bool below( const double point[3] ) const 00119 { 00120 return signed_distance( point ) <= 0.0; 00121 } 00122 00123 /** return true if point is above the plane */ 00124 bool above( const double point[3] ) const 00125 { 00126 return signed_distance( point ) >= 0.0; 00127 } 00128 00129 double distance( const double point[3] ) const 00130 { 00131 return fabs( signed_distance( point ) ); 00132 } 00133 00134 /** reverse plane normal */ 00135 void flip() 00136 { 00137 norm[0] = -norm[0]; 00138 norm[1] = -norm[1]; 00139 norm[2] = -norm[2]; 00140 coeff = -coeff; 00141 } 00142 00143 void set( const double normal[3], const double point[3] ) 00144 { 00145 const double dot = normal[0] * point[0] + normal[1] * point[1] + normal[2] * point[2]; 00146 *this = Plane( normal, -dot ); 00147 } 00148 00149 void set( const double pt1[3], const double pt2[3], const double pt3[3] ); 00150 00151 void set( double i, double j, double k, double cff ) 00152 { 00153 *this = Plane( i, j, k, cff ); 00154 } 00155 00156 /** Create Y = 1 plane by doing set( Y, 1.0 ); */ 00157 void set( Axis normal, double point_on_axis ) 00158 { 00159 coeff = -point_on_axis; 00160 norm[0] = norm[1] = norm[2] = 0; 00161 norm[normal] = 1.0; 00162 } 00163 }; 00164 00165 //! Get split plane for tree node 00166 ErrorCode get_split_plane( EntityHandle node, Plane& plane ) 00167 { 00168 return moab()->tag_get_data( planeTag, &node, 1, &plane ); 00169 } 00170 00171 //! Set split plane for tree node 00172 ErrorCode set_split_plane( EntityHandle node, const Plane& plane ); 00173 00174 //! Get bounding box for entire tree 00175 ErrorCode get_tree_box( EntityHandle root_node, double corner_coords[8][3] ); 00176 00177 //! Get bounding box for entire tree 00178 ErrorCode get_tree_box( EntityHandle root_node, double corner_coords[24] ); 00179 00180 //! Set bounding box for entire tree 00181 ErrorCode set_tree_box( EntityHandle root_node, const double box_min[3], const double box_max[3] ); 00182 ErrorCode set_tree_box( EntityHandle root_node, const double corner_coords[8][3] ); 00183 00184 //! Create tree root node 00185 ErrorCode create_tree( const double box_min[3], const double box_max[3], EntityHandle& root_handle ); 00186 ErrorCode create_tree( const double corner_coords[8][3], EntityHandle& root_handle ); 00187 00188 //! Create tree root node 00189 ErrorCode create_tree( EntityHandle& root_handle ); 00190 00191 //! Find all tree roots 00192 ErrorCode find_all_trees( Range& results ); 00193 00194 //! Destroy a tree 00195 ErrorCode delete_tree( EntityHandle root_handle ); 00196 00197 Interface* moab() 00198 { 00199 return mbInstance; 00200 } 00201 00202 //! Get iterator for tree 00203 ErrorCode get_tree_iterator( EntityHandle tree_root, BSPTreeIter& result ); 00204 00205 //! Get iterator at right-most ('last') leaf. 00206 ErrorCode get_tree_end_iterator( EntityHandle tree_root, BSPTreeIter& result ); 00207 00208 //! Split leaf of tree 00209 //! Updates iterator location to point to first new leaf node. 00210 ErrorCode split_leaf( BSPTreeIter& leaf, Plane plane ); 00211 00212 //! Split leaf of tree 00213 //! Updates iterator location to point to first new leaf node. 00214 ErrorCode split_leaf( BSPTreeIter& leaf, Plane plane, EntityHandle& left_child, EntityHandle& right_child ); 00215 00216 //! Split leaf of tree 00217 //! Updates iterator location to point to first new leaf node. 00218 ErrorCode split_leaf( BSPTreeIter& leaf, Plane plane, const Range& left_entities, const Range& right_entities ); 00219 00220 //! Split leaf of tree 00221 //! Updates iterator location to point to first new leaf node. 00222 ErrorCode split_leaf( BSPTreeIter& leaf, 00223 Plane plane, 00224 const std::vector< EntityHandle >& left_entities, 00225 const std::vector< EntityHandle >& right_entities ); 00226 00227 //! Merge the leaf pointed to by the current iterator with it's 00228 //! sibling. If the sibling is not a leaf, multiple merges may 00229 //! be done. 00230 ErrorCode merge_leaf( BSPTreeIter& iter ); 00231 00232 //! Get leaf containing input position. 00233 //! 00234 //! Does not take into account global bounding box of tree. 00235 //! - Therefore there is always one leaf containing the point. 00236 //! - If caller wants to account for global bounding box, then 00237 //! caller can test against that box and not call this method 00238 //! at all if the point is outside the box, as there is no leaf 00239 //! containing the point in that case. 00240 ErrorCode leaf_containing_point( EntityHandle tree_root, const double point[3], EntityHandle& leaf_out ); 00241 00242 //! Get iterator at leaf containing input position. 00243 //! 00244 //! Returns MB_ENTITY_NOT_FOUND if point is not within 00245 //! bounding box of tree. 00246 ErrorCode leaf_containing_point( EntityHandle tree_root, const double xyz[3], BSPTreeIter& result ); 00247 }; 00248 00249 /** \class BSPTreeIter 00250 * \brief Iterate over leaves of a BSPTree 00251 */ 00252 class BSPTreeIter 00253 { 00254 public: 00255 enum Direction 00256 { 00257 LEFT = 0, 00258 RIGHT = 1 00259 }; 00260 00261 private: 00262 friend class BSPTree; 00263 00264 BSPTree* treeTool; 00265 00266 protected: 00267 std::vector< EntityHandle > mStack; 00268 mutable std::vector< EntityHandle > childVect; 00269 00270 virtual ErrorCode step_to_first_leaf( Direction direction ); 00271 00272 virtual ErrorCode up(); 00273 virtual ErrorCode down( const BSPTree::Plane& plane, Direction direction ); 00274 00275 virtual ErrorCode initialize( BSPTree* tool, EntityHandle root, const double* point = 0 ); 00276 00277 public: 00278 BSPTreeIter() : treeTool( 0 ), childVect( 2 ) {} 00279 virtual ~BSPTreeIter() {} 00280 00281 BSPTree* tool() const 00282 { 00283 return treeTool; 00284 } 00285 00286 //! Get handle for current leaf 00287 EntityHandle handle() const 00288 { 00289 return mStack.back(); 00290 } 00291 00292 //! Get depth in tree. root is at depth of 1. 00293 unsigned depth() const 00294 { 00295 return mStack.size(); 00296 } 00297 00298 //! Advance the iterator either left or right in the tree 00299 //! Note: stepping past the end of the tree will invalidate 00300 //! the iterator. It will *not* be work step the 00301 //! other direction. 00302 virtual ErrorCode step( Direction direction ); 00303 00304 //! Advance to next leaf 00305 //! Returns MB_ENTITY_NOT_FOUND if at end. 00306 //! Note: stepping past the end of the tree will invalidate 00307 //! the iterator. Calling back() will not work. 00308 ErrorCode step() 00309 { 00310 return step( RIGHT ); 00311 } 00312 00313 //! Move back to previous leaf 00314 //! Returns MB_ENTITY_NOT_FOUND if at beginning. 00315 //! Note: stepping past the start of the tree will invalidate 00316 //! the iterator. Calling step() will not work. 00317 ErrorCode back() 00318 { 00319 return step( LEFT ); 00320 } 00321 00322 //! Get split plane that separates this node from its immediate sibling. 00323 ErrorCode get_parent_split_plane( BSPTree::Plane& plane ) const; 00324 00325 //! Get volume of leaf polyhedron 00326 virtual double volume() const; 00327 00328 //! Find range of overlap between ray and leaf. 00329 //! 00330 //!\param ray_point Coordinates of start point of ray 00331 //!\param ray_vect Directionion vector for ray such that 00332 //! the ray is defined by r(t) = ray_point + t * ray_vect 00333 //! for t > 0. 00334 //!\param t_enter Output: if return value is true, this value 00335 //! is the parameter location along the ray at which 00336 //! the ray entered the leaf. If return value is false, 00337 //! then this value is undefined. 00338 //!\param t_exit Output: if return value is true, this value 00339 //! is the parameter location along the ray at which 00340 //! the ray exited the leaf. If return value is false, 00341 //! then this value is undefined. 00342 //!\return true if ray intersects leaf, false otherwise. 00343 virtual bool intersect_ray( const double ray_point[3], 00344 const double ray_vect[3], 00345 double& t_enter, 00346 double& t_exit ) const; 00347 00348 //! Return true if thos node and the passed node share the 00349 //! same immediate parent. 00350 bool is_sibling( const BSPTreeIter& other_leaf ) const; 00351 00352 //! Return true if thos node and the passed node share the 00353 //! same immediate parent. 00354 bool is_sibling( EntityHandle other_leaf ) const; 00355 00356 //! Returns true if calling step() will advance to the 00357 //! immediate sibling of the current node. Returns false 00358 //! if current node is root or back() will move to the 00359 //! immediate sibling. 00360 bool sibling_is_forward() const; 00361 00362 //! Calculate the convex polyhedron bounding this leaf. 00363 virtual ErrorCode calculate_polyhedron( BSPTreePoly& polyhedron_out ) const; 00364 }; 00365 00366 /** \class BSPTreeBoxIter 00367 * \brief Iterate over leaves of a BSPTree 00368 */ 00369 class BSPTreeBoxIter : public BSPTreeIter 00370 { 00371 private: 00372 double leafCoords[8][3]; 00373 struct Corners 00374 { 00375 double coords[4][3]; 00376 }; 00377 std::vector< Corners > stackData; 00378 00379 protected: 00380 virtual ErrorCode step_to_first_leaf( Direction direction ); 00381 00382 virtual ErrorCode up(); 00383 virtual ErrorCode down( const BSPTree::Plane& plane, Direction direction ); 00384 00385 virtual ErrorCode initialize( BSPTree* tool, EntityHandle root, const double* point = 0 ); 00386 00387 public: 00388 BSPTreeBoxIter() {} 00389 virtual ~BSPTreeBoxIter() {} 00390 00391 //! Faces of a hex : corner bitmap 00392 enum SideBits 00393 { 00394 B0154 = 0x33, //!< Face defined by corners {0,1,5,4}: 1st Exodus side 00395 B1265 = 0x66, //!< Face defined by corners {1,2,6,5}: 2nd Exodus side 00396 B2376 = 0xCC, //!< Face defined by corners {2,3,7,6}: 3rd Exodus side 00397 B3047 = 0x99, //!< Face defined by corners {3,0,4,7}: 4th Exodus side 00398 B3210 = 0x0F, //!< Face defined by corners {3,2,1,0}: 5th Exodus side 00399 B4567 = 0xF0 //!< Face defined by corners {4,5,6,7}: 6th Exodus side 00400 }; 00401 00402 static SideBits side_above_plane( const double hex_coords[8][3], const BSPTree::Plane& plane ); 00403 00404 static SideBits side_on_plane( const double hex_coords[8][3], const BSPTree::Plane& plane ); 00405 00406 static SideBits opposite_face( const SideBits& bits ) 00407 { 00408 return (SideBits)( ( ~bits ) & 0xFF ); 00409 } 00410 00411 static ErrorCode face_corners( const SideBits face, const double hex_corners[8][3], double face_corners_out[4][3] ); 00412 00413 //! Advance the iterator either left or right in the tree 00414 //! Note: stepping past the end of the tree will invalidate 00415 //! the iterator. It will *not* work to subsequently 00416 //! step the other direction. 00417 virtual ErrorCode step( Direction direction ); 00418 00419 //! Advance to next leaf 00420 //! Returns MB_ENTITY_NOT_FOUND if at end. 00421 //! Note: stepping past the end of the tree will invalidate 00422 //! the iterator. Calling back() will not work. 00423 ErrorCode step() 00424 { 00425 return BSPTreeIter::step(); 00426 } 00427 00428 //! Move back to previous leaf 00429 //! Returns MB_ENTITY_NOT_FOUND if at beginning. 00430 //! Note: stepping past the start of the tree will invalidate 00431 //! the iterator. Calling step() will not work. 00432 ErrorCode back() 00433 { 00434 return BSPTreeIter::back(); 00435 } 00436 00437 //! Get coordinates of box corners, in Exodus II hexahedral ordering. 00438 ErrorCode get_box_corners( double coords[8][3] ) const; 00439 00440 //! Get volume of leaf box 00441 double volume() const; 00442 00443 //! test if a plane intersects the leaf box 00444 enum XSect 00445 { 00446 MISS = 0, 00447 SPLIT = 1, 00448 NONHEX = -1 00449 }; 00450 XSect splits( const BSPTree::Plane& plane ) const; 00451 00452 //! test if a plane intersects the leaf box 00453 bool intersects( const BSPTree::Plane& plane ) const; 00454 00455 //! Find range of overlap between ray and leaf. 00456 //! 00457 //!\param ray_point Coordinates of start point of ray 00458 //!\param ray_vect Directionion vector for ray such that 00459 //! the ray is defined by r(t) = ray_point + t * ray_vect 00460 //! for t > 0. 00461 //!\param t_enter Output: if return value is true, this value 00462 //! is the parameter location along the ray at which 00463 //! the ray entered the leaf. If return value is false, 00464 //! then this value is undefined. 00465 //!\param t_exit Output: if return value is true, this value 00466 //! is the parameter location along the ray at which 00467 //! the ray exited the leaf. If return value is false, 00468 //! then this value is undefined. 00469 //!\return true if ray intersects leaf, false otherwise. 00470 bool intersect_ray( const double ray_point[3], const double ray_vect[3], double& t_enter, double& t_exit ) const; 00471 00472 //! Return the side of the box bounding this tree node 00473 //! that is shared with the immediately adjacent sibling 00474 //! (the tree node that shares a common parent node with 00475 //! this node in the binary tree.) 00476 //! 00477 //!\return MB_ENTITY_NOT FOUND if root node. 00478 //! MB_FAILURE if internal error. 00479 //! MB_SUCCESS otherwise. 00480 ErrorCode sibling_side( SideBits& side_out ) const; 00481 00482 //! Get adjacent leaf nodes on indicated side 00483 //! 00484 //!\param side Face of box for which to retrieve neighbors 00485 //!\param results List to which to append results. This function does 00486 //! *not* clear existing values in list. 00487 //!\param epsilon Tolerance on overlap. A positive value E will 00488 //! result in nodes that are separated by as much as E 00489 //! to be considered touching. A negative value -E will 00490 //! cause leaves that do not overlap by at least E to be 00491 //! considered non-overlapping. Amongst other things, 00492 //! this value can be used to control whether or not 00493 //! leaves adjacent at only their edges or corners are 00494 //! returned. 00495 ErrorCode get_neighbors( SideBits side, std::vector< BSPTreeBoxIter >& results, double epsilon = 0.0 ) const; 00496 00497 //! Calculate the convex polyhedron bounding this leaf. 00498 ErrorCode calculate_polyhedron( BSPTreePoly& polyhedron_out ) const; 00499 }; 00500 00501 } // namespace moab 00502 00503 #endif