Mesh Oriented datABase
(version 5.4.1)
Array-based unstructured mesh datastructure
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00001 // Copyright (c) 2010, Lawrence Livermore National Security, LLC. Produced at 00002 // the Lawrence Livermore National Laboratory. LLNL-CODE-443211. All Rights 00003 // reserved. See file COPYRIGHT for details. 00004 // 00005 // This file is part of the MFEM library. For more information and source code 00006 // availability see http://mfem.org. 00007 // 00008 // MFEM is free software; you can redistribute it and/or modify it under the 00009 // terms of the GNU Lesser General Public License (as published by the Free 00010 // Software Foundation) version 2.1 dated February 1999. 00011 00012 /// This HYPRE library interface has been taken originally from MFEM and modified 00013 /// to suit the needs for the MOAB library. 00014 /// Modified by: Vijay Mahadevan 00015 00016 #ifndef MOAB_HYPRESOLVER 00017 #define MOAB_HYPRESOLVER 00018 00019 #include "moab/MOABConfig.h" 00020 #include "moab/Core.hpp" 00021 00022 #ifdef MOAB_HAVE_MPI 00023 #include <mpi.h> 00024 00025 // Enable internal hypre timing routines 00026 #ifndef HYPRE_TIMING 00027 #define HYPRE_TIMING 00028 #endif 00029 00030 #include "HypreParVector.hpp" 00031 #include "HypreParMatrix.hpp" 00032 00033 namespace moab 00034 { 00035 00036 /// Base class for solvers 00037 class AbstractSolver 00038 { 00039 protected: 00040 const Eigen::SparseMatrix< double >* m_operator; 00041 00042 public: 00043 /// If true, use the second argument of Mult as an initial guess 00044 bool iterative_mode; 00045 00046 /// Initialize a Solver 00047 explicit AbstractSolver( bool iter_mode ) 00048 { 00049 iterative_mode = iter_mode; 00050 } 00051 00052 /// Set/update the solver for the given operator 00053 virtual void SetOperator( const HypreParMatrix& op ) = 0; 00054 }; 00055 00056 /// Abstract class for hypre's solvers and preconditioners 00057 class HypreSolver : public AbstractSolver 00058 { 00059 public: 00060 typedef HypreParVector Vector; 00061 00062 protected: 00063 /// The linear system matrix 00064 HypreParMatrix* A; 00065 00066 /// Right-hand side and solution vector 00067 mutable HypreParVector *B, *X; 00068 00069 /// Was hypre's Setup function called already? 00070 mutable int setup_called; 00071 00072 public: 00073 HypreSolver( bool iterative = true ); 00074 00075 HypreSolver( HypreParMatrix* _A, bool iterative = true ); 00076 00077 /// Typecast to HYPRE_Solver -- return the solver 00078 virtual operator HYPRE_Solver() const = 0; 00079 00080 virtual void Verbosity( int /*print_level*/ ) 00081 { /* nothing to do */ 00082 } 00083 00084 /// Set the hypre solver to be used as a preconditioner 00085 virtual void SetPreconditioner( HypreSolver& /*precond*/ ) 00086 { /* Nothing to do */ 00087 } 00088 00089 /// hypre's internal Setup function 00090 virtual HYPRE_PtrToParSolverFcn SetupFcn() const = 0; 00091 /// hypre's internal Solve function 00092 virtual HYPRE_PtrToParSolverFcn SolveFcn() const = 0; 00093 00094 virtual void SetOperator( const HypreParMatrix& /*op*/ ) 00095 { 00096 MB_SET_ERR_RET( "HypreSolvers do not support SetOperator!" ); 00097 } 00098 00099 virtual void GetFinalResidualNorm( double& normr ) = 0; 00100 00101 virtual void GetNumIterations( int& num_iterations ) = 0; 00102 00103 /// Solve the linear system Ax=b 00104 virtual HYPRE_Int Solve( const HypreParVector& b, HypreParVector& x ) const; 00105 00106 virtual ~HypreSolver(); 00107 }; 00108 00109 /// PCG solver in hypre 00110 class HyprePCG : public HypreSolver 00111 { 00112 private: 00113 HYPRE_Solver pcg_solver; 00114 00115 public: 00116 HyprePCG( HypreParMatrix& _A ); 00117 00118 void SetTol( double tol ); 00119 void SetMaxIter( int max_iter ); 00120 void SetLogging( int logging ); 00121 virtual void Verbosity( int print_lvl ); 00122 00123 /// Set the hypre solver to be used as a preconditioner 00124 virtual void SetPreconditioner( HypreSolver& precond ); 00125 00126 /** Use the L2 norm of the residual for measuring PCG convergence, plus 00127 (optionally) 1) periodically recompute true residuals from scratch; and 00128 2) enable residual-based stopping criteria. */ 00129 void SetResidualConvergenceOptions( int res_frequency = -1, double rtol = 0.0 ); 00130 00131 /// non-hypre setting 00132 void SetZeroInintialIterate() 00133 { 00134 iterative_mode = false; 00135 } 00136 00137 virtual void GetFinalResidualNorm( double& normr ) 00138 { 00139 HYPRE_ParCSRPCGGetFinalRelativeResidualNorm( pcg_solver, &normr ); 00140 } 00141 00142 virtual void GetNumIterations( int& num_iterations ) 00143 { 00144 HYPRE_Int num_it; 00145 HYPRE_ParCSRPCGGetNumIterations( pcg_solver, &num_it ); 00146 num_iterations = internal::to_int( num_it ); 00147 } 00148 00149 /// The typecast to HYPRE_Solver returns the internal pcg_solver 00150 virtual operator HYPRE_Solver() const 00151 { 00152 return pcg_solver; 00153 } 00154 00155 /// PCG Setup function 00156 virtual HYPRE_PtrToParSolverFcn SetupFcn() const 00157 { 00158 return (HYPRE_PtrToParSolverFcn)HYPRE_ParCSRPCGSetup; 00159 } 00160 /// PCG Solve function 00161 virtual HYPRE_PtrToParSolverFcn SolveFcn() const 00162 { 00163 return (HYPRE_PtrToParSolverFcn)HYPRE_ParCSRPCGSolve; 00164 } 00165 00166 /// Solve Ax=b with hypre's PCG 00167 virtual HYPRE_Int Solve( const HypreParVector& b, HypreParVector& x ) const; 00168 using HypreSolver::Solve; 00169 00170 virtual ~HyprePCG(); 00171 }; 00172 00173 /// GMRES solver in hypre 00174 class HypreGMRES : public HypreSolver 00175 { 00176 private: 00177 HYPRE_Solver gmres_solver; 00178 00179 public: 00180 HypreGMRES( HypreParMatrix& _A ); 00181 00182 void SetTol( double atol, double rtol = 1e-20 ); 00183 void SetMaxIter( int max_iter ); 00184 void SetKDim( int dim ); 00185 void SetLogging( int logging ); 00186 virtual void Verbosity( int print_lvl ); 00187 00188 /// Set the hypre solver to be used as a preconditioner 00189 virtual void SetPreconditioner( HypreSolver& precond ); 00190 00191 /** Use the L2 norm of the residual for measuring PCG convergence, plus 00192 (optionally) 1) periodically recompute true residuals from scratch; and 00193 2) enable residual-based stopping criteria. */ 00194 void SkipRealResidualCheck() 00195 { 00196 HYPRE_GMRESSetSkipRealResidualCheck( gmres_solver, 1 ); 00197 } 00198 00199 /// non-hypre setting 00200 void SetZeroInintialIterate() 00201 { 00202 iterative_mode = false; 00203 } 00204 00205 virtual void GetFinalResidualNorm( double& normr ) 00206 { 00207 HYPRE_ParCSRGMRESGetFinalRelativeResidualNorm( gmres_solver, &normr ); 00208 } 00209 00210 virtual void GetNumIterations( int& num_iterations ) 00211 { 00212 HYPRE_Int num_it; 00213 HYPRE_GMRESGetNumIterations( gmres_solver, &num_it ); 00214 num_iterations = internal::to_int( num_it ); 00215 } 00216 00217 /// The typecast to HYPRE_Solver returns the internal gmres_solver 00218 virtual operator HYPRE_Solver() const 00219 { 00220 return gmres_solver; 00221 } 00222 00223 /// GMRES Setup function 00224 virtual HYPRE_PtrToParSolverFcn SetupFcn() const 00225 { 00226 return (HYPRE_PtrToParSolverFcn)HYPRE_ParCSRGMRESSetup; 00227 } 00228 /// GMRES Solve function 00229 virtual HYPRE_PtrToParSolverFcn SolveFcn() const 00230 { 00231 return (HYPRE_PtrToParSolverFcn)HYPRE_ParCSRGMRESSolve; 00232 } 00233 00234 /// Solve Ax=b with hypre's GMRES 00235 virtual HYPRE_Int Solve( const HypreParVector& b, HypreParVector& x ) const; 00236 using HypreSolver::Solve; 00237 00238 virtual ~HypreGMRES(); 00239 }; 00240 00241 /// The identity operator as a hypre solver 00242 class HypreIdentity : public HypreSolver 00243 { 00244 public: 00245 virtual operator HYPRE_Solver() const 00246 { 00247 return NULL; 00248 } 00249 00250 virtual HYPRE_PtrToParSolverFcn SetupFcn() const 00251 { 00252 return (HYPRE_PtrToParSolverFcn)hypre_ParKrylovIdentitySetup; 00253 } 00254 virtual HYPRE_PtrToParSolverFcn SolveFcn() const 00255 { 00256 return (HYPRE_PtrToParSolverFcn)hypre_ParKrylovIdentity; 00257 } 00258 00259 virtual void GetNumIterations( int& num_iterations ) 00260 { 00261 num_iterations = 1; 00262 } 00263 00264 virtual void GetFinalResidualNorm( double& normr ) 00265 { 00266 normr = 0.0; 00267 } 00268 00269 virtual ~HypreIdentity() {} 00270 }; 00271 00272 /// Jacobi preconditioner in hypre 00273 class HypreDiagScale : public HypreSolver 00274 { 00275 public: 00276 HypreDiagScale() : HypreSolver() {} 00277 explicit HypreDiagScale( HypreParMatrix& A ) : HypreSolver( &A ) {} 00278 virtual operator HYPRE_Solver() const 00279 { 00280 return NULL; 00281 } 00282 00283 virtual HYPRE_PtrToParSolverFcn SetupFcn() const 00284 { 00285 return (HYPRE_PtrToParSolverFcn)HYPRE_ParCSRDiagScaleSetup; 00286 } 00287 virtual HYPRE_PtrToParSolverFcn SolveFcn() const 00288 { 00289 return (HYPRE_PtrToParSolverFcn)HYPRE_ParCSRDiagScale; 00290 } 00291 00292 virtual void GetNumIterations( int& num_iterations ) 00293 { 00294 num_iterations = 1; 00295 } 00296 00297 virtual void GetFinalResidualNorm( double& normr ) 00298 { 00299 normr = 0.0; 00300 } 00301 00302 HypreParMatrix* GetData() 00303 { 00304 return A; 00305 } 00306 virtual ~HypreDiagScale() {} 00307 }; 00308 00309 /// The ParaSails preconditioner in hypre 00310 class HypreParaSails : public HypreSolver 00311 { 00312 private: 00313 HYPRE_Solver sai_precond; 00314 00315 public: 00316 HypreParaSails( HypreParMatrix& A ); 00317 00318 void SetSymmetry( int sym ); 00319 00320 virtual void GetNumIterations( int& num_iterations ) 00321 { 00322 num_iterations = 1; 00323 } 00324 00325 virtual void GetFinalResidualNorm( double& normr ) 00326 { 00327 normr = 0.0; 00328 } 00329 00330 /// The typecast to HYPRE_Solver returns the internal sai_precond 00331 virtual operator HYPRE_Solver() const 00332 { 00333 return sai_precond; 00334 } 00335 00336 virtual HYPRE_PtrToParSolverFcn SetupFcn() const 00337 { 00338 return (HYPRE_PtrToParSolverFcn)HYPRE_ParaSailsSetup; 00339 } 00340 virtual HYPRE_PtrToParSolverFcn SolveFcn() const 00341 { 00342 return (HYPRE_PtrToParSolverFcn)HYPRE_ParaSailsSolve; 00343 } 00344 00345 virtual ~HypreParaSails(); 00346 }; 00347 00348 /// The BoomerAMG solver in hypre 00349 class HypreBoomerAMG : public HypreSolver 00350 { 00351 private: 00352 HYPRE_Solver amg_precond; 00353 00354 /// Default, generally robust, BoomerAMG options 00355 void SetDefaultOptions(); 00356 00357 // If amg_precond is NULL, allocates it and sets default options. 00358 // Otherwise saves the options from amg_precond, destroys it, allocates a new 00359 // one, and sets its options to the saved values. 00360 void ResetAMGPrecond(); 00361 00362 public: 00363 HypreBoomerAMG(); 00364 00365 HypreBoomerAMG( HypreParMatrix& A ); 00366 00367 virtual void SetOperator( const HypreParMatrix& op ); 00368 00369 virtual void GetNumIterations( int& num_iterations ) 00370 { 00371 num_iterations = 1; 00372 } 00373 00374 virtual void GetFinalResidualNorm( double& normr ) 00375 { 00376 normr = 0.0; 00377 } 00378 00379 /** More robust options for systems, such as elasticity. Note that BoomerAMG 00380 assumes Ordering::byVDIM in the finite element space used to generate the 00381 matrix A. */ 00382 void SetSystemsOptions( int dim ); 00383 00384 virtual void Verbosity( int print_level ) 00385 { 00386 HYPRE_BoomerAMGSetPrintLevel( amg_precond, print_level ); 00387 } 00388 00389 /// The typecast to HYPRE_Solver returns the internal amg_precond 00390 virtual operator HYPRE_Solver() const 00391 { 00392 return amg_precond; 00393 } 00394 00395 virtual HYPRE_PtrToParSolverFcn SetupFcn() const 00396 { 00397 return (HYPRE_PtrToParSolverFcn)HYPRE_BoomerAMGSetup; 00398 } 00399 virtual HYPRE_PtrToParSolverFcn SolveFcn() const 00400 { 00401 return (HYPRE_PtrToParSolverFcn)HYPRE_BoomerAMGSolve; 00402 } 00403 00404 virtual ~HypreBoomerAMG(); 00405 }; 00406 00407 } // namespace moab 00408 00409 #endif // MOAB_HAVE_MPI 00410 00411 #endif