SpectralMeshTool.cpp

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#include "moab/SpectralMeshTool.hpp"
#include "moab/Interface.hpp"
#include "Internals.hpp"
#include "moab/ReadUtilIface.hpp"
#include "moab/CN.hpp"

#include 
#include 

namespace moab
{
const short int SpectralMeshTool::permute_array[] = { 0, 1, 13, 25, 3, 2, 14, 26, 7, 6, 18, 30, 11, 10, 22, 34 };

// lin_permute_array does the same to get the linear vertices of the coarse quad
const short int SpectralMeshTool::lin_permute_array[] = { 0, 25, 34, 11 };

Tag SpectralMeshTool::spectral_vertices_tag( const bool create_if_missing )
{
    ErrorCode rval = MB_SUCCESS;
    if( !svTag && create_if_missing )
    {
        if( !spectralOrder )
        {
            // should already be a spectral order tag...
            MB_SET_ERR_RET_VAL( "Spectral order must be set before creating spectral vertices tag", 0 );
        }

        // create it
        std::vector< EntityHandle > dum_val( spectralOrderp1 * spectralOrderp1, 0 );
        rval = mbImpl->tag_get_handle( "SPECTRAL_VERTICES", spectralOrderp1 * spectralOrderp1, MB_TYPE_HANDLE, svTag,
                                       MB_TAG_DENSE | MB_TAG_CREAT, &dum_val[0] );
    }

    return ( rval == MB_SUCCESS ? svTag : 0 );
}

/** \brief Return tag used to store spectral order
 * \param create_if_missing If true, will create this tag if it doesn't exist already
 */
Tag SpectralMeshTool::spectral_order_tag( const bool create_if_missing )
{
    ErrorCode rval = MB_SUCCESS;
    if( !soTag && create_if_missing )
    {

        // create it
        int dum = 0;
        rval = mbImpl->tag_get_handle( "SPECTRAL_ORDER", 1, MB_TYPE_INTEGER, soTag, MB_TAG_DENSE | MB_TAG_CREAT, &dum );
    }

    return ( rval == MB_SUCCESS ? soTag : 0 );
}

/** \brief Convert representation from coarse to fine
 * Each element in set, or in interface if set is not input, is converted to fine elements, using
 * vertices in SPECTRAL_VERTICES tagged array
 * \param spectral_set Set containing spectral elements
 */
ErrorCode SpectralMeshTool::convert_to_fine( EntityHandle /* spectral_set */ )
{
    return MB_NOT_IMPLEMENTED;
}

/** \brief Convert representation from fine to coarse
 * Each element in set, or in interface if set is not input, is converted to coarse elements, with
 * fine vertices put into SPECTRAL_VERTICES tagged array.  NOTE: This function assumes that each
 * order^d (fine) elements comprise each coarse element, and are in order of fine elements in each
 * coarse element.  If order is input as 0, looks for a SPECTRAL_ORDER tag on the mesh.
 * \param order Order of the spectral mesh
 * \param spectral_set Set containing spectral elements
 */
ErrorCode SpectralMeshTool::convert_to_coarse( int order, EntityHandle spectral_set )
{
    if( order ) spectralOrder = order;
    if( !spectralOrder )
    {
        MB_SET_ERR( MB_FAILURE, "Spectral order must be set or input before converting to spectral mesh" );
    }

    Range tmp_ents, ents;
    ErrorCode rval = mbImpl->get_entities_by_handle( spectral_set, tmp_ents );
    if( MB_SUCCESS != rval || ents.empty() ) return rval;

    // get the max-dimensional elements from it
    ents = tmp_ents.subset_by_dimension( 3 );
    if( ents.empty() ) ents = tmp_ents.subset_by_dimension( 2 );
    if( ents.empty() ) ents = tmp_ents.subset_by_dimension( 1 );
    if( ents.empty() )
    {
        MB_SET_ERR( MB_FAILURE, "Can't find any entities for conversion" );
    }

    // get a ptr to connectivity
    if( ents.psize() != 1 )
    {
        MB_SET_ERR( MB_FAILURE, "Entities must be in one chunk for conversion" );
    }
    EntityHandle* conn;
    int count, verts_per_e;
    rval = mbImpl->connect_iterate( ents.begin(), ents.end(), conn, verts_per_e, count );
    if( MB_SUCCESS != rval || count != (int)ents.size() ) return rval;

    Range tmp_range;
    return create_spectral_elems( conn, ents.size(), CN::Dimension( TYPE_FROM_HANDLE( *ents.begin() ) ), tmp_range );
}

template < class T >
ErrorCode SpectralMeshTool::create_spectral_elems( const T* conn,
                                                   int num_fine_elems,
                                                   int dim,
                                                   Range& output_range,
                                                   int start_idx,
                                                   Range* local_gids )
{
    assert( spectralOrder && num_fine_elems );

    // now create num_coarse_elems
    // compute the number of local elems, accounting for coarse or fine representation
    // spectral_unit is the # fine elems per coarse elem, or spectralOrder^2
    int spectral_unit    = spectralOrder * spectralOrder;
    int num_coarse_elems = num_fine_elems / spectral_unit;

    EntityHandle* new_conn;
    EntityHandle start_elem;
    ReadUtilIface* rmi;
    ErrorCode rval = mbImpl->query_interface( rmi );
    if( MB_SUCCESS != rval ) return rval;

    int verts_per_felem = spectralOrderp1 * spectralOrderp1, verts_per_celem = std::pow( (double)2.0, dim );

    rval = rmi->get_element_connect( num_coarse_elems, verts_per_celem, ( 2 == dim ? MBQUAD : MBHEX ), 0, start_elem,
                                     new_conn );MB_CHK_SET_ERR( rval, "Failed to create elems" );

    output_range.insert( start_elem, start_elem + num_coarse_elems - 1 );

    // read connectivity into that space

    // permute_array takes a 4*order^2-long vector of integers, representing the connectivity of
    // order^2 elems (fine elems in a coarse elem), and picks out the ids of the vertices necessary
    // to get a lexicographically-ordered array of vertices in a spectral element of that order
    // assert(verts_per_felem == (sizeof(permute_array)/sizeof(unsigned int)));

    // we're assuming here that elems was empty on input
    int count;
    EntityHandle* sv_ptr = NULL;
    rval = mbImpl->tag_iterate( spectral_vertices_tag( true ), output_range.begin(), output_range.end(), count,
                                (void*&)sv_ptr );MB_CHK_SET_ERR( rval, "Failed to get SPECTRAL_VERTICES ptr" );
    assert( count == num_coarse_elems );
    int f = start_idx, fs = 0, fl = 0;
    for( int c = 0; c < num_coarse_elems; c++ )
    {
        for( int i = 0; i < verts_per_celem; i++ )
            new_conn[fl + i] = conn[f + lin_permute_array[i]];
        fl += verts_per_celem;
        for( int i = 0; i < verts_per_felem; i++ )
            sv_ptr[fs + i] = conn[f + permute_array[i]];
        f += verts_per_celem * spectral_unit;
        fs += verts_per_felem;
    }
    if( local_gids ) std::copy( sv_ptr, sv_ptr + verts_per_felem * num_coarse_elems, range_inserter( *local_gids ) );

    return MB_SUCCESS;
}

// force instantiation of a few specific types
template ErrorCode SpectralMeshTool::create_spectral_elems< int >( const int* conn,
                                                                   int num_fine_elems,
                                                                   int dim,
                                                                   Range& output_range,
                                                                   int start_idx,
                                                                   Range* local_gids );
template ErrorCode SpectralMeshTool::create_spectral_elems< EntityHandle >( const EntityHandle* conn,
                                                                            int num_fine_elems,
                                                                            int dim,
                                                                            Range& output_range,
                                                                            int start_idx,
                                                                            Range* local_gids );
}  // namespace moab