adjacency.c

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/**
 * MOAB, a Mesh-Oriented datABase, is a software component for creating,
 * storing and accessing finite element mesh data.
 *
 * Copyright 2004 Sandia Corporation.  Under the terms of Contract
 * DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government
 * retains certain rights in this software.
 *
 * This library is free software; you can redistribute it and/or
 * modify it under the terms of the GNU Lesser General Public
 * License as published by the Free Software Foundation; either
 * version 2.1 of the License, or (at your option) any later version.
 *
 */

#include 
#include 
#include 
#include "mhdf.h"
#include "util.h"
#include "file-handle.h"
#include "status.h"
#include "names-and-paths.h"

int mhdf_haveAdjacency( mhdf_FileHandle file, const char* elem_group, mhdf_Status* status )
{
    FileHandle* file_ptr;
    hid_t elem_id;
    int result;
    API_BEGIN;

    file_ptr = (FileHandle*)( file );
    if( !mhdf_check_valid_file( file_ptr, status ) ) return -1;

    if( elem_group == mhdf_node_type_handle() )
    {
#if defined( H5Gopen_vers ) && H5Gopen_vers > 1
        elem_id = H5Gopen( file_ptr->hdf_handle, NODE_GROUP, H5P_DEFAULT );
#else
        elem_id = H5Gopen( file_ptr->hdf_handle, NODE_GROUP );
#endif
        if( elem_id < 0 )
        {
            mhdf_setFail( status, "H5Gopen( \"%s\" ) failed.\n", NODE_GROUP );
            return -1;
        }
    }
    else
    {
        elem_id = mhdf_elem_group_from_handle( file_ptr, elem_group, status );
        if( elem_id < 0 ) return -1;
    }

    result = mhdf_is_in_group( elem_id, ADJACENCY_NAME, status );
    H5Gclose( elem_id );
    mhdf_setOkay( status );
    API_END;
    return result;
}

hid_t mhdf_createAdjacency( mhdf_FileHandle file, const char* elem_handle, long adj_list_size, mhdf_Status* status )
{
    FileHandle* file_ptr;
    hid_t elem_id, table_id;
    hsize_t dim = (hsize_t)adj_list_size;
    API_BEGIN;

    file_ptr = (FileHandle*)( file );
    if( !mhdf_check_valid_file( file_ptr, status ) ) return -1;

    if( adj_list_size < 1 )
    {
        mhdf_setFail( status, "Invalid argument.\n" );
        return -1;
    }

    if( elem_handle == mhdf_node_type_handle() )
    {
        table_id = mhdf_create_table( file_ptr->hdf_handle, NODE_ADJCY_PATH, file_ptr->id_type, 1, &dim, status );
    }
    else
    {
        elem_id = mhdf_elem_group_from_handle( file_ptr, elem_handle, status );
        if( elem_id < 0 ) return -1;

        table_id = mhdf_create_table( elem_id, ADJACENCY_NAME, file_ptr->id_type, 1, &dim, status );
        H5Gclose( elem_id );
    }

    API_END_H( 1 );
    return table_id;
}

hid_t mhdf_openAdjacency( mhdf_FileHandle file, const char* elem_handle, long* adj_list_size_out, mhdf_Status* status )

{
    FileHandle* file_ptr;
    hid_t elem_id, table_id;
    hsize_t dim;
    API_BEGIN;

    file_ptr = (FileHandle*)( file );
    if( !mhdf_check_valid_file( file_ptr, status ) ) return -1;

    if( !adj_list_size_out )
    {
        mhdf_setFail( status, "Invalid argument.\n" );
        return -1;
    }

    if( elem_handle == mhdf_node_type_handle() )
    {
        table_id = mhdf_open_table( file_ptr->hdf_handle, NODE_ADJCY_PATH, 1, &dim, status );
    }
    else
    {
        elem_id = mhdf_elem_group_from_handle( file_ptr, elem_handle, status );
        if( elem_id < 0 ) return -1;
        table_id = mhdf_open_table( elem_id, ADJACENCY_NAME, 1, &dim, status );
        H5Gclose( elem_id );
    }

    *adj_list_size_out = (long)dim;
    API_END_H( 1 );
    return table_id;
}

void mhdf_writeAdjacency( hid_t table_id, long offset, long count, hid_t type, const void* data, mhdf_Status* status )
{
    API_BEGIN;
    mhdf_write_data( table_id, offset, count, type, data, H5P_DEFAULT, status );
    API_END;
}

void mhdf_writeAdjacencyWithOpt( hid_t table_id,
                                 long offset,
                                 long count,
                                 hid_t type,
                                 const void* data,
                                 hid_t prop,
                                 mhdf_Status* status )
{
    API_BEGIN;
    mhdf_write_data( table_id, offset, count, type, data, prop, status );
    API_END;
}

void mhdf_readAdjacency( hid_t table_id, long offset, long count, hid_t type, void* data, mhdf_Status* status )
{
    API_BEGIN;
    mhdf_read_data( table_id, offset, count, type, data, H5P_DEFAULT, status );
    API_END;
}
void mhdf_readAdjacencyWithOpt( hid_t table_id,
                                long offset,
                                long count,
                                hid_t type,
                                void* data,
                                hid_t prop,
                                mhdf_Status* status )
{
    API_BEGIN;
    mhdf_read_data( table_id, offset, count, type, data, prop, status );
    API_END;
}