coords_connect_iterate.cpp

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#include "moab/Core.hpp"
#include "moab/Range.hpp"
#include "moab/ScdInterface.hpp"
#include "moab/HomXform.hpp"
#include "moab/ReadUtilIface.hpp"
#include "TestUtil.hpp"
#include <cstdlib>
#include <algorithm>

void test_coords_connect_iterate();
void test_scd_invalid();
void test_iterates();

using namespace moab;

int main()
{
    int failures = 0;

    failures += RUN_TEST( test_coords_connect_iterate );
    failures += RUN_TEST( test_scd_invalid );
    failures += RUN_TEST( test_iterates );

    if( failures ) std::cerr << "<<<< " << failures << " TESTS FAILED >>>>" << std::endl;

    return failures;
}

void test_coords_connect_iterate()
{
    // create 1000 vertices
    const unsigned int NUM_VTX = 1000;
    Core moab;
    Interface& mb = moab;
    std::vector< double > coords( 3 * NUM_VTX );
    for( unsigned int i = 0; i < NUM_VTX; i++ )
        coords[3 * i] = coords[3 * i + 1] = coords[3 * i + 2] = i;

    Range verts, hexes, faces, edges, dead;
    ErrorCode rval = mb.create_vertices( &coords[0], NUM_VTX, verts );CHECK_ERR( rval );

    // create a bunch of hexes from those
    ReadUtilIface* rui;
    EntityHandle *orig_connect, start_hex;
    rval = mb.query_interface( rui );CHECK_ERR( rval );
    rval = rui->get_element_connect( NUM_VTX / 8, 8, MBHEX, 1, start_hex, orig_connect );CHECK_ERR( rval );
    std::copy( verts.begin(), verts.end(), orig_connect );
    hexes.insert( start_hex, start_hex + NUM_VTX / 8 - 1 );

    // delete about 1% of vertices
    const int step      = 100;
    int remaining       = NUM_VTX;
    Range::iterator vit = verts.begin();
    EntityHandle entities[2];
    for( int j = 0; j < remaining; j += step )
    {
        entities[0] = start_hex + j / 8;
        entities[1] = *vit;
        rval        = mb.delete_entities( entities, 2 );CHECK_ERR( rval );
        dead.insert( *vit );
        dead.insert( start_hex + j / 8 );
        vit = verts.erase( vit );
        vit += step - 1;
        hexes.erase( start_hex + j / 8 );
    }

    // Remove some additional values from the range
    // so that our handle blocks don't always align with
    // sequences
    verts.erase( verts.begin() + ( step - 5 ), verts.begin() + ( step + 5 ) );
    hexes.erase( hexes.begin() + ( step / 8 - 5 ), hexes.begin() + ( step / 8 + 5 ) );

    // Check that we get back expected values
    double *xcoord, *ycoord, *zcoord;
    vit = verts.begin();
    int count, total = 0;
    while( vit != verts.end() )
    {
        rval = mb.coords_iterate( vit, verts.end(), xcoord, ycoord, zcoord, count );
        if( MB_SUCCESS && ( !xcoord || !ycoord || !zcoord ) ) rval = MB_FAILURE;CHECK_ERR( rval );

        assert( total + count <= (int)verts.size() );
        for( int i = 0; i < count; i++ )
        {
            // vertex handles start at 1, so need to subtract one
            double val = *vit + (double)i - 1.0;
            CHECK_REAL_EQUAL( val, xcoord[i], 1.0e-10 );
            CHECK_REAL_EQUAL( val, ycoord[i], 1.0e-10 );
            CHECK_REAL_EQUAL( val, zcoord[i], 1.0e-10 );
        }

        // Check that we can set values and get the right values back
        for( int i = 0; i < count; i++ )
        {
            xcoord[i] *= 2.0;
            ycoord[i] *= 2.0;
            zcoord[i] *= 2.0;
        }

        std::vector< double > dum( 3 * count );
        Range dum_verts( *vit, *vit + count - 1 );
        rval = mb.get_coords( dum_verts, &dum[0] );CHECK_ERR( rval );
        for( int i = 0; i < count; i++ )
        {
            // vertex handles start at 1, so need to subtract 1 from expected value
            double val = 2.0 * ( *vit + (double)i - 1 );
            CHECK_REAL_EQUAL( val, xcoord[i], 1.0e-10 );
            CHECK_REAL_EQUAL( val, ycoord[i], 1.0e-10 );
            CHECK_REAL_EQUAL( val, zcoord[i], 1.0e-10 );
        }

        vit += count;
        total += count;
    }

    // now check connectivity
    Range::iterator hit   = hexes.begin();
    EntityHandle* connect = NULL;
    EntityHandle dum_connect[8];
    int num_connect;
    while( hit != hexes.end() )
    {
        rval = mb.connect_iterate( hit, hexes.end(), connect, num_connect, count );
        if( MB_SUCCESS && !connect ) rval = MB_FAILURE;CHECK_ERR( rval );
        CHECK_EQUAL( num_connect, 8 );

        // should be equal to initial connectivity
        for( int i = 0; i < count; i++ )
        {
            EntityHandle first = 8 * ( *hit - start_hex + i ) + 1;
            for( unsigned int j = 0; j < 8; j++ )
                dum_connect[j] = first + j;
            CHECK_ARRAYS_EQUAL( connect, 8, &dum_connect[0], 8 );
            connect += 8;
        }

        hit += count;
        // total += count;
    }

    // ok, done
}

void test_scd_invalid()
{
    // check that we get errors from structured mesh
    Core moab;
    Interface& mb = moab;
    ScdInterface* scdi;
    ErrorCode rval = mb.query_interface( scdi );CHECK_ERR( rval );

    // make an arbitrary structured mesh
    const int NUM_DIMS = 10;
    HomCoord low( 0, 0, 0 ), high( NUM_DIMS, NUM_DIMS, NUM_DIMS );
    ScdBox* new_box = NULL;
    rval            = scdi->construct_box( low, high, NULL, 0, new_box );CHECK_ERR( rval );
    CHECK( new_box != NULL );

    EntityHandle start_hex = new_box->start_element();
    Range hexes( start_hex, start_hex + NUM_DIMS * NUM_DIMS * NUM_DIMS - 1 );

    // should be able to get vertices used by this box
    Range verts;
    rval = mb.get_adjacencies( hexes, 0, false, verts, Interface::UNION );CHECK_ERR( rval );
    CHECK_EQUAL( (int)verts.size(), (int)( ( NUM_DIMS + 1 ) * ( NUM_DIMS + 1 ) * ( NUM_DIMS + 1 ) ) );

    // should NOT be able to get connect iterator
    EntityHandle* connect;
    int count, num_connect;
    // expected failure
    rval = mb.connect_iterate( hexes.begin(), hexes.end(), connect, num_connect, count );
    CHECK_EQUAL( rval, MB_FAILURE );
}

// these tests are for sequences that result in contiguous entity ranges
// sequences are still broken in memory
void test_iterates()
{
    // create 400 vertices, in 2 separate sequences
    // also, create 50 hexes, in 2 separate sequences
    const int NUM_VTX = 400;
    const int NUM_HEX = 50;
    Core moab;
    Interface& mb = moab;
    std::vector< double > coords( 3 * NUM_VTX / 2 );
    for( unsigned int i = 0; i < NUM_VTX / 2; i++ )
    {
        coords[3 * i]     = i;
        coords[3 * i + 1] = 10 * i;
        coords[3 * i + 2] = 100 * i;
    }

    Range verts, hexes;
    ErrorCode rval = mb.create_vertices( &coords[0], NUM_VTX / 2, verts );CHECK_ERR( rval );

    // create more vertices, with same coordinates
    Range v2;
    rval = mb.create_vertices( &coords[0], NUM_VTX / 2, v2 );CHECK_ERR( rval );
    Range ver = unite( verts, v2 );
    // range of vertices is contiguous, but its memory for vertices is not!!
    CHECK_EQUAL( (int)ver.psize(), 1 );
    // create a bunch of hexes from those
    ReadUtilIface* rui;
    EntityHandle start_hex;
    rval = mb.query_interface( rui );CHECK_ERR( rval );

    Range::iterator vertIter = ver.begin();
    for( int i = 0; i < NUM_HEX; i += NUM_HEX / 2 )
    {
        EntityHandle *orig_connect, current_hex;
        Range::iterator vertIterEnd = vertIter + ( 25 * 8 );
        rval                        = rui->get_element_connect( 25, 8, MBHEX, 1, current_hex, orig_connect );CHECK_ERR( rval );
        std::copy( vertIter, vertIterEnd, orig_connect );
        hexes.insert( current_hex, current_hex + 24 );
        vertIter += ( NUM_HEX / 2 * 8 );
    }

    // make sure hexes range is contiguous
    CHECK_EQUAL( (int)hexes.psize(), 1 );
    start_hex = hexes.front();
    Tag idtag = moab.globalId_tag();

    for( int i = 0; i < NUM_HEX; i++, start_hex++ )
    {
        rval = mb.tag_set_data( idtag, &start_hex, 1, &i );CHECK_ERR( rval );
    }
    int count = 0;
    int total = 0;

    // now check connectivity
    start_hex             = hexes.front();
    Range::iterator hit   = hexes.begin();
    EntityHandle* connect = NULL;
    EntityHandle dum_connect[8];
    int num_connect;
    while( hit != hexes.end() )
    {
        rval = mb.connect_iterate( hit, hexes.end(), connect, num_connect, count );
        if( MB_SUCCESS && !connect ) rval = MB_FAILURE;

        CHECK_ERR( rval );
        CHECK_EQUAL( num_connect, 8 );
        CHECK_EQUAL( count, NUM_HEX / 2 );
        // should be equal to initial connectivity
        for( int i = 0; i < count; i++ )
        {
            EntityHandle first = 8 * ( *hit - start_hex + i ) + 1;
            for( unsigned int j = 0; j < 8; j++ )
                dum_connect[j] = first + j;
            CHECK_ARRAYS_EQUAL( connect, 8, &dum_connect[0], 8 );
            connect += 8;
        }

        hit += count;
        total += count;
    }

    hit = hexes.begin();
    void* ptr;
    while( hit != hexes.end() )
    {
        // get contiguous block of tag data, of size of the sequence allocated
        rval = mb.tag_iterate( idtag, hit, hexes.end(), count, ptr );CHECK_ERR( rval );
        CHECK_EQUAL( count, NUM_HEX / 2 );
        hit += count;
    }

    hit = ver.begin();
    // coords_iterate
    double* xc;
    double* yc;
    double* zc;
    while( hit != ver.end() )
    {
        // get contiguous block of coords

        rval = mb.coords_iterate( hit, ver.end(), xc, yc, zc, count );CHECK_ERR( rval );
        CHECK_EQUAL( count, NUM_VTX / 2 );
        hit += count;
    }
}